View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12671_high_11 (Length: 361)
Name: NF12671_high_11
Description: NF12671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12671_high_11 |
 | |
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| [»] scaffold1461 (1 HSPs) |
| | |
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| [»] scaffold0483 (1 HSPs) |
| | |
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| [»] scaffold0004 (1 HSPs) |
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| [»] scaffold0127 (1 HSPs) |
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| [»] scaffold0348 (1 HSPs) |
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| [»] scaffold0023 (1 HSPs) |
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| [»] scaffold0461 (1 HSPs) |
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| [»] scaffold0609 (1 HSPs) |
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| [»] scaffold0222 (1 HSPs) |
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| [»] scaffold0146 (1 HSPs) |
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| [»] scaffold0028 (3 HSPs) |
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| [»] scaffold1318 (1 HSPs) |
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| [»] scaffold0453 (1 HSPs) |
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| [»] scaffold0720 (1 HSPs) |
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| [»] scaffold0124 (1 HSPs) |
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| [»] scaffold0019 (1 HSPs) |
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| [»] scaffold2054 (1 HSPs) |
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| [»] scaffold0139 (1 HSPs) |
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| [»] scaffold0034 (1 HSPs) |
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| [»] scaffold0053 (2 HSPs) |
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| [»] scaffold0001 (1 HSPs) |
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| [»] scaffold0317 (1 HSPs) |
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| [»] scaffold0261 (1 HSPs) |
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| [»] scaffold0249 (1 HSPs) |
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| [»] scaffold0072 (1 HSPs) |
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| [»] scaffold0020 (1 HSPs) |
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| [»] scaffold0138 (1 HSPs) |
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| [»] scaffold0107 (1 HSPs) |
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Alignment Details
Target: scaffold1461 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: scaffold1461
Description:
Target: scaffold1461; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 5 - 281
Target Start/End: Original strand, 1420 - 1697
Alignment:
| Q |
5 |
agggagagctagagcaagagaggaccgtttt-gctatagattgttcgtgcgtttttcttctaaattaaggtaagggtgagattatcttgcaatgatctta |
103 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1420 |
agggagagctagagcaagagaggatcgtttttgctgtagattgttcgtacgtttttcttctaaattaaggtaagggtgagattatcttgcaatgatctta |
1519 |
T |
|
| Q |
104 |
atatgcaatttctgaaaattaatctaattggttgttcataaagataaaattgggaattaagggttgatgatgactttgaaaagattagtgtcagaattgt |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||| |
|
|
| T |
1520 |
atatgcaatttctgaaaattaatctaattggttgttcataaagataaaattgggaattaagggttaatgatgactatgaaaagattagtgtcaaaattgt |
1619 |
T |
|
| Q |
204 |
gtctaatgtgttgtaattgggtg-tcataatgattccttaattcttaatgttgttgtaatcagaatttgagagagatta |
281 |
Q |
| |
|
|| |||||||||||||||||||| | | ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
1620 |
gtttaatgtgttgtaattgggtgttaagaatgattcc-taattcttaatgttgctgtaatcagaatttgagagagatta |
1697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0483 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: scaffold0483
Description:
Target: scaffold0483; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 340
Target Start/End: Original strand, 10952 - 11282
Alignment:
| Q |
1 |
aacaagggagagctagagcaagagaggaccgtttt-gctatagattgttcgtgcgtttttcttctaaattaaggtaagggtgagattatcttgcaatgat |
99 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10952 |
aacaagggagagctagagcaagagaggatcgtttttgctggagattgttcgtaagtttttcttctaaattaaggtaagggtgagattatcttgcaatgat |
11051 |
T |
|
| Q |
100 |
cttaatatgcaattt-ctgaaaattaatctaattggttgttcataaagataaaattgggaattaagggttgatgatgactttgaaaagattagtgtcaga |
198 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| | | |
|
|
| T |
11052 |
cttaatatgcaattttctgaaaattaatctaattgtttgttcataaggataaaattggggattaagggttgatgatgactttgaaaagattagtgtgaaa |
11151 |
T |
|
| Q |
199 |
attgtgtctaatgtgttgtaattgggtg-tcataatgattccttaattcttaatgttgttgtaatcagaatttgagagagattagaattgttggagaaaa |
297 |
Q |
| |
|
||||||| |||||| ||||||||||||| ||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
11152 |
attgtgtttaatgtattgtaattgggtgttcagaatgattcc-taattcttaatgttgctgtaatcagaatttgagagagattagaatt----------- |
11239 |
T |
|
| Q |
298 |
tttgaagagaatggctaaattgtttgaatgctctgaattgttg |
340 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11240 |
tttggagagaatggctaaattgtttgaatgctctgaattgttg |
11282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 93; Significance: 3e-45; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 44 - 227
Target Start/End: Original strand, 29643362 - 29643545
Alignment:
| Q |
44 |
ttgttcgtgcgtttttcttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcat |
142 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||| ||||||| |||||||||||||||||| ||||| |||||||| |
|
|
| T |
29643362 |
ttgttcgtgcgtttt-cttctaaattaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaattaatcaaattgaattgttcat |
29643460 |
T |
|
| Q |
143 |
aaagataaaattgggaattaagggttgatgatgactttgaaaagattagtgtcagaattgtgtctaatgtgttgtaattgggtgt |
227 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| || | || |||| |||| ||||||| || | |||||||||||| ||||| |
|
|
| T |
29643461 |
gaagataaaattgagaattaagggttgatgatgatttaggaaggattggtgtaagaattgggttaattgtgttgtaatttggtgt |
29643545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 56 - 286
Target Start/End: Complemental strand, 18614340 - 18614108
Alignment:
| Q |
56 |
ttttcttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagataaaatt |
154 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||| ||| | |||| |||||||||||||| ||| ||||| |||||| | ||||||||||| |
|
|
| T |
18614340 |
ttttcttctaaattaaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatccaattgaattgttcttgaagataaaatt |
18614241 |
T |
|
| Q |
155 |
gggaattaagggttgatgatgactttgaaaagattagtgtcagaattgtgtctaatgtgttgtaattgggtg-tcataatgattccttaattcttaatgt |
253 |
Q |
| |
|
| |||||| || || ||| ||| || |||| || | |||| |||||| ||| || |||| | || ||| ||| ||||||| |||||| | |||||| |
|
|
| T |
18614240 |
gagaattagggttttatgctgatttagaaaggaatggtgtaagaattatgtttattgtgcttagttttcgtgttcagaatgatttcttaatccataatgt |
18614141 |
T |
|
| Q |
254 |
tgttgtaatcagaatttgagagagattagaatt |
286 |
Q |
| |
|
|| ||| ||||||||||||| ||||||||||| |
|
|
| T |
18614140 |
tgctgtgatcagaatttgaggtagattagaatt |
18614108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 23482046 - 23482169
Alignment:
| Q |
62 |
tctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagat-aaaattgggaa |
159 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||| ||| || ||| |||||||||||||| ||||||||| |||||| | || || ||||||||||| |
|
|
| T |
23482046 |
tctaaattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattgggaa |
23482145 |
T |
|
| Q |
160 |
ttaagggttgatgatgactttgaaa |
184 |
Q |
| |
|
|| |||||||||| ||| ||||||| |
|
|
| T |
23482146 |
tt-agggttgatgctgattttgaaa |
23482169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 24320671 - 24320729
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatc |
127 |
Q |
| |
|
||||||||||||| ||||||||| |||| || |||||| |||||||||||||||||| |
|
|
| T |
24320671 |
taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc |
24320729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 39364994 - 39364916
Alignment:
| Q |
50 |
gtgcgtttttcttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatct |
128 |
Q |
| |
|
||||| ||||||||| ||||||||||||||||||| ||||| |||| || || ||| |||||||||||||| |||| |
|
|
| T |
39364994 |
gtgcggttttcttctgaattaaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattgatct |
39364916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 83
Target Start/End: Original strand, 20258133 - 20258161
Alignment:
| Q |
55 |
tttttcttctaaattaaggtaagggtgag |
83 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
20258133 |
tttttcttctaaattaaggtaagggtgag |
20258161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 83
Target Start/End: Original strand, 21044763 - 21044791
Alignment:
| Q |
55 |
tttttcttctaaattaaggtaagggtgag |
83 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
21044763 |
tttttcttctaaattaaggtaagggtgag |
21044791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 84; Significance: 7e-40; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 13323788 - 13323939
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattgg-ttgttcataaagataaaattgggaattaagggt |
167 |
Q |
| |
|
||||||||||||||||||||||| |||| ||| ||||||| |||||||||||||||||| |||| | |||||| | |||||||||||||||||| ||||| |
|
|
| T |
13323788 |
taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaattaatcaaattagattgttcttgaagataaaattgggaatttagggt |
13323887 |
T |
|
| Q |
168 |
tgatgatgactttgaaaagattagtgtcagaattgtgtctaatgtgttgtaa |
219 |
Q |
| |
|
|||||||||||| |||| || | |||| |||||||||| ||||||||||||| |
|
|
| T |
13323888 |
tgatgatgacttcgaaaggaatggtgtaagaattgtgtttaatgtgttgtaa |
13323939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 13302241 - 13302391
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattggttgttcataaagataaaattgggaattaagggtt |
168 |
Q |
| |
|
||||||||||||||||||||||| |||| ||| ||||||| |||||||||||||||||| ||| |||||| | |||||||||| ||||||| |||||| |
|
|
| T |
13302241 |
taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaattaatcaaatgcattgttcttgaagataaaatggggaatttagggtt |
13302340 |
T |
|
| Q |
169 |
gatgatgactttgaaaagattagtgtcagaattgtgtctaatgtgttgtaa |
219 |
Q |
| |
|
||||||||||| |||| || | |||| |||||||||| ||||||||||||| |
|
|
| T |
13302341 |
gatgatgacttcgaaaggaatggtgtaagaattgtgtttaatgtgttgtaa |
13302391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 13312897 - 13313047
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattggttgttcataaagataaaattgggaattaagggtt |
168 |
Q |
| |
|
||||||||||||||||||||||| |||| ||| ||||||| ||||| |||||||||||| ||| | |||||| | |||||||||| ||||||| |||||| |
|
|
| T |
13312897 |
taaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaattaatcaaatggattgttcttgaagataaaatagggaatttagggtt |
13312996 |
T |
|
| Q |
169 |
gatgatgactttgaaaagattagtgtcagaattgtgtctaatgtgttgtaa |
219 |
Q |
| |
|
||||||||||| |||| || | |||| |||||||||| ||||||||||||| |
|
|
| T |
13312997 |
gatgatgacttcgaaaggaatggtgtaagaattgtgtttaatgtgttgtaa |
13313047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 14762688 - 14762822
Alignment:
| Q |
1 |
aacaagggagagctagagcaagagaggaccg---ttttgctatagattgttcgtgcgtttttcttctaaattaaggtaagggtgagattatcttgcaatg |
97 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||||| ||||||||||||| | ||||||||||||||||||||||||||||| ||||| | || |
|
|
| T |
14762688 |
aacaagggagagctagagcaagagaggatcgtttttttgctgtagattgttcgtgtg-ttttcttctaaattaaggtaagggtgagactatctctcgata |
14762786 |
T |
|
| Q |
98 |
atcttaatatgcaatttctgaaaattaatctaattg |
133 |
Q |
| |
|
||| |||| | |||||||||||||| | ||||||| |
|
|
| T |
14762787 |
atcataatctataatttctgaaaattgacctaattg |
14762822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 51301643 - 51301541
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagataaaattgggaattaagggt |
167 |
Q |
| |
|
||||||||||||||||||||||| |||| ||| ||||||| |||||||||||||||||| ||||| |||||||| | ||||||||||||||| ||||| |
|
|
| T |
51301643 |
taaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaattaatc-aattgaattgttcatgagaataaaattgggaatt-agggt |
51301546 |
T |
|
| Q |
168 |
tgatg |
172 |
Q |
| |
|
||||| |
|
|
| T |
51301545 |
tgatg |
51301541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 272
Target Start/End: Original strand, 17240505 - 17240718
Alignment:
| Q |
61 |
ttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagat-aaaattggga |
158 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| |||| ||||||||| |||||||||||||| ||||||||| |||||| | || || |||||||||| |
|
|
| T |
17240505 |
ttctgaattaaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggga |
17240604 |
T |
|
| Q |
159 |
attaagggttgatgatgactttgaaaagattagtgtcagaattgtgtctaatgtgttgtaattgggtg-tcataatgattccttaattcttaatgttgtt |
257 |
Q |
| |
|
||| |||||||||| ||| ||||||| || | |||| ||||| ||| ||| || || ||||| ||| ||| ||||||| ||||| |||||||| | |
|
|
| T |
17240605 |
att-agggttgatgctgattttgaaaggaatggtgtaagaatcatgtttaacgtattttaatttagtgttcaaaatgatttattaatctataatgttgct |
17240703 |
T |
|
| Q |
258 |
gtaatcagaatttga |
272 |
Q |
| |
|
|| |||||||||||| |
|
|
| T |
17240704 |
gtgatcagaatttga |
17240718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 133
Target Start/End: Complemental strand, 9534401 - 9534318
Alignment:
| Q |
50 |
gtgcgtttttcttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg |
133 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||| ||||| |||| ||| |||| | |||||||||||||| | ||||||| |
|
|
| T |
9534401 |
gtgcatttttcttctgaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg |
9534318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 14865900 - 14865842
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatc |
127 |
Q |
| |
|
||||||||||||| ||||||||| |||| || ||||||| |||||||||||||||||| |
|
|
| T |
14865900 |
taaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaattaatc |
14865842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 12033445 - 12033560
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagataaaattggg-aattaaggg |
166 |
Q |
| |
|
||||||||||||| ||||||||| |||| || |||||| |||||||||||||||||| ||||| ||||| | ||| |||||||||| ||||||||| |
|
|
| T |
12033445 |
taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttc-ttaaggtaaaattgggaaattaaggg |
12033542 |
T |
|
| Q |
167 |
ttgatgatgactttgaaa |
184 |
Q |
| |
|
|| ||||||| ||||||| |
|
|
| T |
12033543 |
ttaatgatgattttgaaa |
12033560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 10389444 - 10389508
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg |
133 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| |||| | |||||||||||| ||||||||||| |
|
|
| T |
10389444 |
taaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattg |
10389508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 10414533 - 10414597
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg |
133 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| |||| | |||||||||||| ||||||||||| |
|
|
| T |
10414533 |
taaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattg |
10414597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 10421203 - 10421267
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg |
133 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| |||| | |||||||||||| ||||||||||| |
|
|
| T |
10421203 |
taaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattg |
10421267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 17131786 - 17131728
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatc |
127 |
Q |
| |
|
||||||||||||| ||||||||| |||| || |||||| |||||||||||||||||| |
|
|
| T |
17131786 |
taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc |
17131728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 18929308 - 18929239
Alignment:
| Q |
61 |
ttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaa |
130 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| |||| ||| | |||| |||||||||||||| |||||| |
|
|
| T |
18929308 |
ttctgaattaaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa |
18929239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 86
Target Start/End: Original strand, 11849586 - 11849614
Alignment:
| Q |
58 |
ttcttctaaattaaggtaagggtgagatt |
86 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
11849586 |
ttcttctaaattaaggtaagggtgagatt |
11849614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 66 - 340
Target Start/End: Complemental strand, 14486718 - 14486442
Alignment:
| Q |
66 |
aattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattgg-ttgttcataaagataaaattgggaattaag |
164 |
Q |
| |
|
|||| |||||||||||||| |||| | |||||||| |||||| |||||||||||||||||| ||||| |||||| | ||||||||||||||||| || |
|
|
| T |
14486718 |
aattcaggtaagggtgagactatccttcaatgatcataatatataatttctgaaaattaatcgaattgaattgttcttgaagataaaattgggaatatag |
14486619 |
T |
|
| Q |
165 |
ggttgatgatgactttgaaaagattagtgtcagaattg-tgtctaatgtgttgtaattgggtgt-cataatgattccttaattcttaatgttgttgtaat |
262 |
Q |
| |
|
|||||||||||| ||||| | || | |||| |||||| ||| || |||| || |||| || ||||||||||| || |||||||||||||||| |
|
|
| T |
14486618 |
ggttgatgatgattttgataggaatggtgtgagaattcatgtttattgtgaatagtttccgtgttcagaatgattccttgatctttaatgttgttgtaat |
14486519 |
T |
|
| Q |
263 |
cagaatttgagagagattagaattgttggagaaaatttgaagagaatggctaaattgtttgaatgctctgaattgttg |
340 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||| ||||||| |||| |||||| ||||| ||||||||||| |
|
|
| T |
14486518 |
cagaatttgagggagattagaattgttggagaaaa-ttggagagaattgctagattgttagaatgagctgaattgttg |
14486442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 16146831 - 16146889
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatc |
127 |
Q |
| |
|
||||||||||||| ||||||||| |||| || ||||||| |||||||||||||||||| |
|
|
| T |
16146831 |
taaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaattaatc |
16146889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 221
Target Start/End: Complemental strand, 27906320 - 27906167
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagataaaattgggaattaagggt |
167 |
Q |
| |
|
|||| |||||||| ||||||||| |||||||| |||| | ||||||||||||||||| |||| | | |||| | |||||||||||| |||||| || |
|
|
| T |
27906320 |
taagataagggtgggattatctttcaatgatcataatgtataatttctgaaaattaatataatagaatagttcttgaagataaaattgagaattagggtg |
27906221 |
T |
|
| Q |
168 |
tgatgatgactttgaaaagattagtgtcagaattgtgtctaatgtgttgtaatt |
221 |
Q |
| |
|
||||| ||| ||||||| | |||| ||||| ||| ||||||||||||||| |
|
|
| T |
27906220 |
tgatgttgattttgaaagaaaaggtgtaagaatcatgtttaatgtgttgtaatt |
27906167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 15245278 - 15245217
Alignment:
| Q |
62 |
tctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaatt |
123 |
Q |
| |
|
|||||||||||||||||||||| || || |||||||| |||||| |||||||||||||| |
|
|
| T |
15245278 |
tctaaattaaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaatt |
15245217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 63; Significance: 3e-27; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 23058061 - 23057972
Alignment:
| Q |
1 |
aacaagggagagctagagcaagagaggaccgtttt-gctatagattgttcgtgcgtttttcttctaaattaaggtaagggtgagattatct |
90 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
23058061 |
aacaagggagagctagagcaagagaggatcgtttttgctgtagattgttcgtgcgtttt-cttctaaattaaggtaagggtgagactatct |
23057972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 61 - 292
Target Start/End: Complemental strand, 9187558 - 9187324
Alignment:
| Q |
61 |
ttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaatta-atctaattgg-ttgttcataaagataaaa-ttggg |
157 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| |||| ||||||||| |||||||||||| || ||||||||| |||||| | || |||||| ||||| |
|
|
| T |
9187558 |
ttctgaattaaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaaatagatctaattgaattgttcttgaatataaaaattggg |
9187459 |
T |
|
| Q |
158 |
aattaagggttgatgatgactttgaaaagattagtgtcagaattgtgtctaatgtgttgtaattgggtgt-cataatgattccttaattcttaatgttgt |
256 |
Q |
| |
|
||||| ||||||||| ||| ||||||| || | ||| ||||| ||| ||||||||||||||| |||| || ||||||| |||||| ||||||||| |
|
|
| T |
9187458 |
aatta-gggttgatgctgattttgaaaggaatgatgtaagaatcatgtttaatgtgttgtaatttagtgttcagaatgatttcttaatctataatgttgt |
9187360 |
T |
|
| Q |
257 |
tgtaatcagaatttgagagagattagaattgttgga |
292 |
Q |
| |
|
||| |||||||||||| || ||||||||||||||| |
|
|
| T |
9187359 |
tgtgatcagaatttgaatgaaattagaattgttgga |
9187324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 162
Target Start/End: Complemental strand, 31252477 - 31252383
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagataaaattgggaatta |
162 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||| | |||| | |||||||||||| |||||| |
|
|
| T |
31252477 |
taaggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaaattgagaatta |
31252383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 11288669 - 11288721
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaa |
121 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||||||| |||||||||||| |
|
|
| T |
11288669 |
taaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaa |
11288721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 25397247 - 25397174
Alignment:
| Q |
50 |
gtgcgtttttcttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaatt |
123 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| || || | |||||| |||||| |||||||||||||| |
|
|
| T |
25397247 |
gtgcgtttttcttctgaattaaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaatt |
25397174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 15458544 - 15458478
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctg--aaaattaatctaattg |
133 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| |||||| |||||||| |||||||||||||||| |
|
|
| T |
15458544 |
taaggtaagggtgggattatctttcaatgattataatatataatttctgaaaaaattaatctaattg |
15458478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 15465139 - 15465073
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctg--aaaattaatctaattg |
133 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| |||||| |||||||| |||||||||||||||| |
|
|
| T |
15465139 |
taaggtaagggtgggattatctttcaatgattataatatataatttctgaaaaaattaatctaattg |
15465073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 23839260 - 23839189
Alignment:
| Q |
62 |
tctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg |
133 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||| ||| |||| | |||||||||||||| | ||||||| |
|
|
| T |
23839260 |
tctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg |
23839189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 10986124 - 10986158
Alignment:
| Q |
1 |
aacaagggagagctagagcaagagaggaccgtttt |
35 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |
|
|
| T |
10986124 |
aacaagggagagctagagcaagagaggatcgtttt |
10986158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 25348561 - 25348483
Alignment:
| Q |
50 |
gtgcgtttttcttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatct |
128 |
Q |
| |
|
||||| ||||||||| ||||||||||||||||||| ||||| |||| || || ||| |||||||||||||| |||| |
|
|
| T |
25348561 |
gtgcggttttcttctgaattaaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattgatct |
25348483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 12943198 - 12943149
Alignment:
| Q |
50 |
gtgcgtttttcttctaaattaaggtaagggtgagattatcttgcaatgat |
99 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||| ||||| ||||||| |
|
|
| T |
12943198 |
gtgcatttttcttctgaattaaggtaagggtgagactatctctcaatgat |
12943149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 34639987 - 34640051
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg |
133 |
Q |
| |
|
|||||||||||||||| ||||| |||| |||||||| | |||||||||||||| | ||||||| |
|
|
| T |
34639987 |
taaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattg |
34640051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 34646661 - 34646725
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg |
133 |
Q |
| |
|
|||||||||||||||| ||||| |||| |||||||| | |||||||||||||| | ||||||| |
|
|
| T |
34646661 |
taaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattg |
34646725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 19661386 - 19661518
Alignment:
| Q |
1 |
aacaagggagagctagagcaagagaggaccg-ttttgctatagattgttcgtgcgtttttcttctaaattaaggtaagggtgagattatcttgcaatgat |
99 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | ||| | || || |
|
|
| T |
19661386 |
aacaagggagagctagagcaagagaggatcgtttttgctgtagattgttcgtgcg-ttttcttctaaattaaggtaagggtgagactttctctcgataat |
19661484 |
T |
|
| Q |
100 |
cttaatatgcaatttctgaaaattaatctaattg |
133 |
Q |
| |
|
| |||| | |||||||||||||| | ||||||| |
|
|
| T |
19661485 |
cataatctataatttctgaaaattgacctaattg |
19661518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 287
Target Start/End: Complemental strand, 23265205 - 23264977
Alignment:
| Q |
61 |
ttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagat-aaaattggga |
158 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| |||| ||| || ||| |||||||||||||| ||||||||| |||||| | || || ||||||| || |
|
|
| T |
23265205 |
ttctgaattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattgaga |
23265106 |
T |
|
| Q |
159 |
attaagggttgatgatgactttgaaaagattagtgtcagaattgtgtctaatgtgtt--gtaattgggtgtcataatgattccttaattcttaatgttgt |
256 |
Q |
| |
|
||| |||||||||| ||| ||||||| || | |||| ||||| ||| ||||||||| || | | || ||| ||||||| |||||| ||||||||| |
|
|
| T |
23265105 |
att-agggttgatgctgattttgaaaggaatggtgtaagaatcatgtttaatgtgtttagttttcgcgt-tcagaatgatttcttaatctataatgttgt |
23265008 |
T |
|
| Q |
257 |
tgtaatcagaatttgagagagattagaattg |
287 |
Q |
| |
|
||| ||||||||||||| ||||||||||||| |
|
|
| T |
23265007 |
tgtgatcagaatttgagggagattagaattg |
23264977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 27207720 - 27207781
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaa |
130 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| ||||| | ||||||||||||||||||||| |
|
|
| T |
27207720 |
taaggtaagggtgggattatctttcaatgattttaatgtataatttctgaaaattaatctaa |
27207781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 215
Target Start/End: Complemental strand, 23280273 - 23280118
Alignment:
| Q |
61 |
ttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagat-aaaattggga |
158 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| |||| ||| || ||| |||||||||||||| ||||||||| |||||| | || || ||||||| || |
|
|
| T |
23280273 |
ttctgaattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattgaga |
23280174 |
T |
|
| Q |
159 |
attaagggttgatgatgactttgaaaagattagtgtcagaattgtgtctaatgtgtt |
215 |
Q |
| |
|
||| |||||||||| ||| ||||||| || | |||| ||||| ||| ||||||||| |
|
|
| T |
23280173 |
att-agggttgatgctgattttgaaaggaatggtgtaagaatcatgtttaatgtgtt |
23280118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 6483779 - 6483708
Alignment:
| Q |
62 |
tctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg |
133 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||| ||| |||| | |||||||||||||| | ||||||| |
|
|
| T |
6483779 |
tctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg |
6483708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 6487246 - 6487175
Alignment:
| Q |
62 |
tctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg |
133 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||| ||| |||| | |||||||||||||| | ||||||| |
|
|
| T |
6487246 |
tctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg |
6487175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 10631 - 10573
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatc |
127 |
Q |
| |
|
||||||||||||| ||||||||| |||| || |||||| |||||||||||||||||| |
|
|
| T |
10631 |
taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc |
10573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 25180930 - 25180988
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatc |
127 |
Q |
| |
|
||||||||||||| ||||||||| |||| || |||||| |||||||||||||||||| |
|
|
| T |
25180930 |
taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc |
25180988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 26885236 - 26885175
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaat |
131 |
Q |
| |
|
||||||||||||| ||||||||| |||| |||| ||| | |||||||||||||||||||||| |
|
|
| T |
26885236 |
taaggtaagggtgggattatctttcaataatct-aatgtataatttctgaaaattaatctaat |
26885175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 21908422 - 21908353
Alignment:
| Q |
61 |
ttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaa |
130 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| |||| ||| | |||| |||||||||||||| |||||| |
|
|
| T |
21908422 |
ttctgaattaaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa |
21908353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 15168300 - 15168166
Alignment:
| Q |
1 |
aacaagggagagctagagcaagagaggaccgtttt---gctatagattgttcgtgcgtttttcttctaaattaaggtaagggtgagattatcttgcaatg |
97 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| ||| ||||||||||||| ||||| ||||||||||||||||||||||||| ||||| | || |
|
|
| T |
15168300 |
aacaagggagagctagagcaagagaggatcgtttttttgctgtagattgttcgtgtgtttt-cttctaaattaaggtaagggtgagactatctctcgata |
15168202 |
T |
|
| Q |
98 |
atcttaatatgcaatttctgaaaattaatctaattg |
133 |
Q |
| |
|
||| |||| | |||||||||||||| | ||||||| |
|
|
| T |
15168201 |
atcataatctataatttctgaaaattgacctaattg |
15168166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 149 - 285
Target Start/End: Original strand, 21231042 - 21231178
Alignment:
| Q |
149 |
aaaattgggaattaagggttgatgatgactttgaaaagattagtgtcagaattgtgtctaatgtgttgtaattgggtgt-cataatgattccttaattct |
247 |
Q |
| |
|
|||||||||||||| ||||||||| ||| | ||||| || | |||| ||||| ||| ||||||||||||||| ||||| || ||||||| |||||| |
|
|
| T |
21231042 |
aaaattgggaatta-gggttgatgctgattctgaaaggaatggtgtaagaatcatgtttaatgtgttgtaatttggtgttcagaatgatttcttaatcta |
21231140 |
T |
|
| Q |
248 |
taatgttgttgtaatcagaatttgagagagattagaat |
285 |
Q |
| |
|
|||||||||||| |||||||||||| || |||||||| |
|
|
| T |
21231141 |
taatgttgttgtgatcagaatttgaatgaaattagaat |
21231178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 287
Target Start/End: Original strand, 20311130 - 20311272
Alignment:
| Q |
146 |
gataaaattgggaattaagggttgatgatgactttgaaaag-attagtgtcagaattgtgtctaatgtgttgtaattgggtgt-cataatgattccttaa |
243 |
Q |
| |
|
||||||||||||||||| ||||||||| || |||| ||| | | |||| ||||||| || ||||||||||||||| | ||| || ||||| ||||||| |
|
|
| T |
20311130 |
gataaaattgggaatta-gggttgatgccgattttgggaaggaatggtgtaagaattgggtttaatgtgttgtaatttgatgttcagaatgaatccttaa |
20311228 |
T |
|
| Q |
244 |
ttcttaatgttgttgtaatcagaatttgagagagattagaattg |
287 |
Q |
| |
|
| |||||||| ||| ||||||||||||| ||||||||||||| |
|
|
| T |
20311229 |
tctgtaatgttgctgtgatcagaatttgagggagattagaattg |
20311272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 14319630 - 14319691
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaa |
130 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| ||||| | ||||||||||||||||||||| |
|
|
| T |
14319630 |
taaggtaagggtgggattatctttcaatgattttaatgtataatttctgaaaattaatctaa |
14319691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 20906462 - 20906576
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagataaaattgggaattaagggt |
167 |
Q |
| |
|
||||||||||||| ||||||||| |||| || |||||| |||||||||||||||||| ||||| | ||| | ||| |||||||||||||||||||| |
|
|
| T |
20906462 |
taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactattc-ttaaggtaaaattgggaattaagggt |
20906559 |
T |
|
| Q |
168 |
tgatgatgactttgaaa |
184 |
Q |
| |
|
| ||||||| ||||||| |
|
|
| T |
20906560 |
taatgatgattttgaaa |
20906576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 14567076 - 14567022
Alignment:
| Q |
248 |
taatgttgttgtaatcagaatttgagagagattagaattgttggagaaaatttga |
302 |
Q |
| |
|
|||||||||||||||| ||||||| ||||| |||| |||||||||||||| |||| |
|
|
| T |
14567076 |
taatgttgttgtaatccgaatttgggagaggttaggattgttggagaaaaattga |
14567022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 29181110 - 29181168
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatc |
127 |
Q |
| |
|
||||||||||||| ||||||||| |||| || ||||||| |||||||||||||||||| |
|
|
| T |
29181110 |
taaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaattaatc |
29181168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 201
Target Start/End: Complemental strand, 13679548 - 13679415
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaatt-ggttgttcataaagataaaattgggaattaagggt |
167 |
Q |
| |
|
|||||||||||||||| |||||| |||||||| | |||| ||||| |||||||| |||||||| |||||| | | ||||||| || |||||| || | |
|
|
| T |
13679548 |
taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaattaaattgttcttgatgataaaactgagaattagggtt |
13679449 |
T |
|
| Q |
168 |
tgatgatgactttgaaaagattagtgtcagaatt |
201 |
Q |
| |
|
||||| ||| ||||||| || | |||| |||||| |
|
|
| T |
13679448 |
tgatgctgattttgaaaggaatggtgtaagaatt |
13679415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 14230835 - 14230774
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaa |
130 |
Q |
| |
|
||||||||||||| ||||||||| |||||| ||||| | ||||||||||||||||||||| |
|
|
| T |
14230835 |
taaggtaagggtgggattatctttcaatgaatttaatgtataatttctgaaaattaatctaa |
14230774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 16091129 - 16091071
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatc |
127 |
Q |
| |
|
||||||||||||| ||||||||| |||| || ||||||| ||||||||||| |||||| |
|
|
| T |
16091129 |
taaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaagttaatc |
16091071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 11304256 - 11304207
Alignment:
| Q |
50 |
gtgcgtttttcttctaaattaaggtaagggtgagattatcttgcaatgat |
99 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||| ||||| ||||||| |
|
|
| T |
11304256 |
gtgcatttttcttctgaattaaggtaagggtgagactatctctcaatgat |
11304207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 11382868 - 11382925
Alignment:
| Q |
66 |
aattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaatt |
123 |
Q |
| |
|
||||||||||||||||||| ||||| |||| ||| |||||| |||||||||||||| |
|
|
| T |
11382868 |
aattaaggtaagggtgagactatctctcaataatcataatatataatttctgaaaatt |
11382925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 11389345 - 11389402
Alignment:
| Q |
66 |
aattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaatt |
123 |
Q |
| |
|
||||||||||||||||||| ||||| |||| ||| |||||| |||||||||||||| |
|
|
| T |
11389345 |
aattaaggtaagggtgagactatctctcaataatcataatatataatttctgaaaatt |
11389402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 31155448 - 31155387
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctg-aaaattaatcta |
129 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
31155448 |
taaggtaagggtgggattatctttcaatgattataatatataatttctgaaaaattaatcta |
31155387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 11311132 - 11311092
Alignment:
| Q |
50 |
gtgcgtttttcttctaaattaaggtaagggtgagattatct |
90 |
Q |
| |
|
||||| ||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
11311132 |
gtgcggttttcttctgaattaaggtaagggtgagactatct |
11311092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 56 - 287
Target Start/End: Complemental strand, 116964 - 116731
Alignment:
| Q |
56 |
ttttcttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagat-aaaat |
153 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||| ||| || ||| |||||||||||||| ||||||||| |||||| | || || ||||| |
|
|
| T |
116964 |
ttttcttctaaattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaat |
116865 |
T |
|
| Q |
154 |
tgggaattaagggttgatgatgactttgaaaagattagtgtcagaattgtgtctaatgtgttgtaattgggtg-tcataatgattccttaattcttaatg |
252 |
Q |
| |
|
| ||||| |||||||||| ||| ||||||| || | |||| ||||| ||| ||||||||| || ||| ||| ||||||| |||||| ||||| |
|
|
| T |
116864 |
ttagaatt-agggttgatgctgattttgaaaggaatggtgtaagaatcatgtttaatgtgtttagttttcgtgttcagaatgatttcttaatctataatg |
116766 |
T |
|
| Q |
253 |
ttgttgtaatcagaatttgagagagattagaattg |
287 |
Q |
| |
|
||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
116765 |
ttgttgtgatcagaatttgagggagattagaattg |
116731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 54; Significance: 6e-22; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 22337643 - 22337563
Alignment:
| Q |
4 |
aagggagagctagagcaagagaggaccgtttt-gctatagattgttcgtgcgtttttcttctaaattaaggtaagggtgaga |
84 |
Q |
| |
|
|||||||||||||||||||||| || |||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
22337643 |
aagggagagctagagcaagagatgatcgtttttgctgtagattgttcgtgcgtttt-cttctaaattaaggtaagggtgaga |
22337563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 22341181 - 22341102
Alignment:
| Q |
4 |
aagggagagctagagcaagagaggaccgtttt-gctatagattgttcgtgcgtttttcttctaaattaaggtaagggtgag |
83 |
Q |
| |
|
|||||||||||||||||||||| || |||||| ||| ||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22341181 |
aagggagagctagagcaagagatgatcgtttttgctgtagattgttcgtgcgtttt-cttctaaattaaggtaagggtgag |
22341102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 287
Target Start/End: Original strand, 18407936 - 18408164
Alignment:
| Q |
61 |
ttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagat-aaaattggga |
158 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| |||| ||| |||||| |||||||||||||| ||||||||| |||||| | || || |||||||||| |
|
|
| T |
18407936 |
ttctgaattaaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggga |
18408035 |
T |
|
| Q |
159 |
attaagggttgatgatgactttgaaaagattagtgtcagaattgtgtctaatgtgttgtaattgggtg-tcataatgattccttaattcttaatgttgtt |
257 |
Q |
| |
|
||| |||||||||| ||| ||||||| || | |||| ||||| ||| ||||||||| || || ||| ||||||| |||||| |||||||| | |
|
|
| T |
18408036 |
att-agggttgatgctgattttgaaaggaatggtgtaagaatcatgtttaatgtgtttagttttcatgttcagaatgatttcttaatctataatgttgct |
18408134 |
T |
|
| Q |
258 |
gtaatcagaatttgagagagattagaattg |
287 |
Q |
| |
|
|| ||||||||||||| ||||||||||||| |
|
|
| T |
18408135 |
gtgatcagaatttgagggagattagaattg |
18408164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 146 - 301
Target Start/End: Original strand, 22438826 - 22438982
Alignment:
| Q |
146 |
gataaaattgggaattaagggttgatgatgactttgaaaag-attagtgtcagaattgtgtctaatgtgttgtaattgggtgt-cataatgattccttaa |
243 |
Q |
| |
|
||||||||||||||||| ||||||||| || |||| ||| | | |||| ||||||| || ||||||||||||| | | ||| || ||||| ||||||| |
|
|
| T |
22438826 |
gataaaattgggaatta-gggttgatgccgattttgggaaggaatggtgtaagaattgggtttaatgtgttgtaaattgatgttcagaatgaatccttaa |
22438924 |
T |
|
| Q |
244 |
ttcttaatgttgttgtaatcagaatttgagagagattagaattgttggagaaaatttg |
301 |
Q |
| |
|
| |||||||| ||| ||||||||||||| ||||||||||||| | ||||||||||| |
|
|
| T |
22438925 |
tctgtaatgttgctgtgatcagaatttgagggagattagaattggttgagaaaatttg |
22438982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 23111193 - 23111316
Alignment:
| Q |
62 |
tctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagat-aaaattgggaa |
159 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||| ||| || ||| |||||||||||||| ||||||||| |||||| | || || ||||||||||| |
|
|
| T |
23111193 |
tctaaattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattgggaa |
23111292 |
T |
|
| Q |
160 |
ttaagggttgatgatgactttgaaa |
184 |
Q |
| |
|
|| |||||||||| ||| ||||||| |
|
|
| T |
23111293 |
tt-agggttgatgctgattttgaaa |
23111316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 28370036 - 28370119
Alignment:
| Q |
50 |
gtgcgtttttcttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg |
133 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||| ||||| |||| ||| |||| | |||||||||||||| | ||||||| |
|
|
| T |
28370036 |
gtgcatttttcttctgaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg |
28370119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 19512454 - 19512377
Alignment:
| Q |
56 |
ttttcttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg |
133 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||| |||| ||| |||| | |||||||||||||| | ||||||| |
|
|
| T |
19512454 |
ttttcttctgaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg |
19512377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 19236954 - 19236896
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatc |
127 |
Q |
| |
|
||||||||||||| ||||||||| |||| || |||||| |||||||||||||||||| |
|
|
| T |
19236954 |
taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc |
19236896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 34830138 - 34830023
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagataaaattgggaattaagggt |
167 |
Q |
| |
|
||||||||||||| ||||||||| |||| || ||||| | ||||||||||||| |||||||| | | |||| | |||||||||||| |||||| || |
|
|
| T |
34830138 |
taaggtaagggtgggattatctttcaataat-ttaatgtataatttctgaaaatcaatctaatagaatagttcttgaagataaaattgagaattagggta |
34830040 |
T |
|
| Q |
168 |
tgatgatgactttgaaa |
184 |
Q |
| |
|
||||| ||| ||||||| |
|
|
| T |
34830039 |
tgatgctgattttgaaa |
34830023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 52; Significance: 9e-21; HSPs: 12)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 16373077 - 16372995
Alignment:
| Q |
1 |
aacaagggagagctagagcaagagaggaccgtttt-gctatagattgttcgtgcgtttttcttctaaattaaggtaagggtgag |
83 |
Q |
| |
|
||||||||||||||||| ||||||| || |||||| ||| ||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
16373077 |
aacaagggagagctagatcaagagatgatcgtttttgctgtagattgttcgtgcgtttt-cttctaaattaaggtaagggtgag |
16372995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 56 - 172
Target Start/End: Complemental strand, 32651640 - 32651523
Alignment:
| Q |
56 |
ttttcttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagat-aaaat |
153 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||| ||| || ||| |||||||||||||| ||||||||| ||||||| | || || ||||| |
|
|
| T |
32651640 |
ttttcttctaaattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgagttgttcttgaaaataaaaat |
32651541 |
T |
|
| Q |
154 |
tgggaattaagggttgatg |
172 |
Q |
| |
|
|||||||| |||||||||| |
|
|
| T |
32651540 |
tgggaatt-agggttgatg |
32651523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 269
Target Start/End: Original strand, 19663600 - 19663720
Alignment:
| Q |
149 |
aaaattgggaattaagggttgatgatgactttgaaaagattagtgtcagaattgtgtctaatgtgttgtaattgggtg-tcataatgattccttaattct |
247 |
Q |
| |
|
|||||||||||||| ||||||||| ||| ||||||| || | |||| |||||| ||| ||||||||||||||| | || ||| ||||||| |||||| |
|
|
| T |
19663600 |
aaaattgggaatta-gggttgatgctgattttgaaaggaatggtgtaagaattatgtttaatgtgttgtaatttgatgttcagaatgatttcttaatcta |
19663698 |
T |
|
| Q |
248 |
taatgttgttgtaatcagaatt |
269 |
Q |
| |
|
|||||||| ||| ||||||||| |
|
|
| T |
19663699 |
taatgttgctgtgatcagaatt |
19663720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 11158156 - 11158094
Alignment:
| Q |
61 |
ttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaatt |
123 |
Q |
| |
|
|||| ||||||||||||||||||| || || ||||||||||||||| |||||||||||||| |
|
|
| T |
11158156 |
ttctgaattaaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaatt |
11158094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 287
Target Start/End: Complemental strand, 18712862 - 18712634
Alignment:
| Q |
61 |
ttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattgg-ttgttcataaagataaaa-ttggga |
158 |
Q |
| |
|
|||| |||||||||| |||||||| ||||| |||| ||| || ||| |||||||||||||| ||||||||| |||||| | || ||||| || || |
|
|
| T |
18712862 |
ttctgaattaaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaattaaaaatttaga |
18712763 |
T |
|
| Q |
159 |
attaagggttgatgatgactttgaaaagattagtgtcagaattgtgtctaatgtgttgtaattgggtgt-cataatgattccttaattcttaatgttgtt |
257 |
Q |
| |
|
|||| ||||||||| ||| ||||||| || | |||| ||||| ||| ||||||||| || |||| || ||||||| |||||| |||||||| | |
|
|
| T |
18712762 |
atta-gggttgatgctgattttgaaaggaatggtgtaagaatcatgtttaatgtgtttagttttcgtgttcagaatgatttcttaatctataatgttgct |
18712664 |
T |
|
| Q |
258 |
gtaatcagaatttgagagagattagaattg |
287 |
Q |
| |
|
|| ||||||||||||| ||||||||||||| |
|
|
| T |
18712663 |
gtgatcagaatttgagggagattagaattg |
18712634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 20437017 - 20437088
Alignment:
| Q |
62 |
tctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg |
133 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||| ||| |||| | |||||||||||||| | ||||||| |
|
|
| T |
20437017 |
tctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg |
20437088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 20851133 - 20851191
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatc |
127 |
Q |
| |
|
||||||||||||| ||||||||| |||| || |||||| |||||||||||||||||| |
|
|
| T |
20851133 |
taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc |
20851191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 20857760 - 20857818
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatc |
127 |
Q |
| |
|
||||||||||||| ||||||||| |||| || |||||| |||||||||||||||||| |
|
|
| T |
20857760 |
taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc |
20857818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 21706330 - 21706272
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatc |
127 |
Q |
| |
|
||||||||||||| ||||||||| |||| || |||||| |||||||||||||||||| |
|
|
| T |
21706330 |
taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc |
21706272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 21710872 - 21710814
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatc |
127 |
Q |
| |
|
||||||||||||| ||||||||| |||| || |||||| |||||||||||||||||| |
|
|
| T |
21710872 |
taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc |
21710814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 15315634 - 15315670
Alignment:
| Q |
50 |
gtgcgtttttcttctaaattaaggtaagggtgagatt |
86 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
15315634 |
gtgcatttttcttctgaattaaggtaagggtgagatt |
15315670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 20044952 - 20045004
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaa |
121 |
Q |
| |
|
||||||||||||| ||||||| | ||||||||||||||| || ||||||||| |
|
|
| T |
20044952 |
taaggtaagggtgggattatccttcaatgatcttaatatataaattctgaaaa |
20045004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0127 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0127
Description:
Target: scaffold0127; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 10293 - 10191
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagataaaattgggaattaagggt |
167 |
Q |
| |
|
||||||||||||||||||||||| |||| ||| ||||||| |||||||||||||||||| ||||| |||||||| | ||||||||||||||| ||||| |
|
|
| T |
10293 |
taaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaattaatc-aattgaattgttcatgagaataaaattgggaatt-agggt |
10196 |
T |
|
| Q |
168 |
tgatg |
172 |
Q |
| |
|
||||| |
|
|
| T |
10195 |
tgatg |
10191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0348 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0348
Description:
Target: scaffold0348; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 9390 - 9275
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagataaaattgggaattaagggt |
167 |
Q |
| |
|
||||||||||||| ||||||||| |||| || |||||| |||||||||||||||||| ||||| ||||| |||| |||||||||||||||||||| |
|
|
| T |
9390 |
taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttcttaaaagtaaaattgggaattaagggt |
9292 |
T |
|
| Q |
168 |
tgatgatgactttgaaa |
184 |
Q |
| |
|
| ||||||| ||||||| |
|
|
| T |
9291 |
taatgatgattttgaaa |
9275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 135492 - 135377
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagataaaattgggaattaagggt |
167 |
Q |
| |
|
||||||||| ||||||||||||| |||| || |||||| |||||||||||||||||| ||||| ||||| ||||| |||||||| ||||||||||| |
|
|
| T |
135492 |
taaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttcttaaaggtaaaattgagaattaagggt |
135394 |
T |
|
| Q |
168 |
tgatgatgactttgaaa |
184 |
Q |
| |
|
| ||||||| ||||||| |
|
|
| T |
135393 |
taatgatgattttgaaa |
135377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0461 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0461
Description:
Target: scaffold0461; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 66 - 286
Target Start/End: Original strand, 5 - 227
Alignment:
| Q |
66 |
aattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagat-aaaattgggaattaa |
163 |
Q |
| |
|
||||||||||||||||||| ||||| |||| ||||||||| |||||||||||||| ||||||||| |||||| | || || ||||||||||||| | |
|
|
| T |
5 |
aattaaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattgggaatt-a |
103 |
T |
|
| Q |
164 |
gggttgatgatgactttgaaaagattagtgtcagaattgtgtctaatgtgttgtaattgggtg-tcataatgattccttaattcttaatgttgttgtaat |
262 |
Q |
| |
|
|||||| || ||| ||||||| || | |||| ||||| ||| ||||| ||| ||||| ||| ||| ||||||| |||||| ||| |||||||| | |
|
|
| T |
104 |
gggttgttgctgattttgaaaggaatggtgtaagaatcatgtttaatgagttttaatttagtgttcagaatgatttcttaatctataacgttgttgtggt |
203 |
T |
|
| Q |
263 |
cagaatttgagagagattagaatt |
286 |
Q |
| |
|
|||||||||| || ||||||||| |
|
|
| T |
204 |
cagaatttgaaggaaattagaatt |
227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0609 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0609
Description:
Target: scaffold0609; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 162
Target Start/End: Original strand, 5858 - 5952
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagataaaattgggaatta |
162 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| |||||| |||||||||||||||||||||||| | |||| | |||||||||||| |||||| |
|
|
| T |
5858 |
taaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaaattgagaatta |
5952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0222 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0222
Description:
Target: scaffold0222; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 61 - 287
Target Start/End: Complemental strand, 16883 - 16655
Alignment:
| Q |
61 |
ttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagat-aaaattggga |
158 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| |||| ||| || ||| |||||||||||||| ||||||||| |||||| | || || |||||||||| |
|
|
| T |
16883 |
ttctgaattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggga |
16784 |
T |
|
| Q |
159 |
attaagggttgatgatgactttgaaaagattagtgtcagaattgtgtctaatgtgttgtaattgggtg-tcataatgattccttaattcttaatgttgtt |
257 |
Q |
| |
|
||| |||||||||| ||| ||||||| || | || | ||||| ||| ||||||||| || ||| ||| ||||||| |||||| |||||||||| |
|
|
| T |
16783 |
att-agggttgatgctgattttgaaaggaatggtttaagaatcatgtttaatgtgtttagttttcgtgttcagaatgatttcttaatctataatgttgtt |
16685 |
T |
|
| Q |
258 |
gtaatcagaatttgagagagattagaattg |
287 |
Q |
| |
|
|| |||| |||||||| ||| ||||||||| |
|
|
| T |
16684 |
gtgatcataatttgagggaggttagaattg |
16655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0146 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0146
Description:
Target: scaffold0146; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 61 - 184
Target Start/End: Complemental strand, 13695 - 13571
Alignment:
| Q |
61 |
ttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagat-aaaattggga |
158 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| |||| ||||||||| |||||||||||||| ||||||||| |||||| | || || |||||||||| |
|
|
| T |
13695 |
ttctgaattaaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggga |
13596 |
T |
|
| Q |
159 |
attaagggttgatgatgactttgaaa |
184 |
Q |
| |
|
||| |||||||||| ||| ||||||| |
|
|
| T |
13595 |
att-agggttgatgctgattttgaaa |
13571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 3)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 69814 - 69749
Alignment:
| Q |
56 |
ttttcttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaa |
121 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||| ||||||||||||||| ||||| |||||| |
|
|
| T |
69814 |
ttttcttctaaattaaggtaagggtgagactaactttcaatgatcttaatatataatttatgaaaa |
69749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 1941 - 1890
Alignment:
| Q |
248 |
taatgttgttgtaatcagaatttgagagagattagaattgttggagaaaattt |
300 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| |||| ||||||||||||||||| |
|
|
| T |
1941 |
taatgttgctgtaatcagaatttg-gagaggttaggattgttggagaaaattt |
1890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 249 - 303
Target Start/End: Complemental strand, 69618 - 69563
Alignment:
| Q |
249 |
aatgttgttgtaatcagaatttgagagagatta-gaattgttggagaaaatttgaa |
303 |
Q |
| |
|
||||||| || |||||||||||||| ||||||| || ||||||||||||||||||| |
|
|
| T |
69618 |
aatgttgctggaatcagaatttgagggagattaggatttgttggagaaaatttgaa |
69563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1318 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1318
Description:
Target: scaffold1318; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 1913 - 2028
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagataaaattgggaattaagggt |
167 |
Q |
| |
|
||||||||||||| ||||||||| |||| || |||||| |||||||||||||||||| ||||| ||||| | || |||||||||||||||||||| |
|
|
| T |
1913 |
taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttcttgaaagtaaaattgggaattaagggt |
2011 |
T |
|
| Q |
168 |
tgatgatgactttgaaa |
184 |
Q |
| |
|
| ||||||| ||||||| |
|
|
| T |
2012 |
taatgatgattttgaaa |
2028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0453 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0453
Description:
Target: scaffold0453; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 10551 - 10613
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaat |
131 |
Q |
| |
|
||||||||| ||| ||||||||| ||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
10551 |
taaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaattaatctaat |
10613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0720 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0720
Description:
Target: scaffold0720; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 3403 - 3464
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaa |
130 |
Q |
| |
|
|||||||||||||| |||||||| |||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
3403 |
taaggtaagggtgatattatctttcaatgaatttaatatataatttctgaaaattaatctaa |
3464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0124 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0124
Description:
Target: scaffold0124; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 269
Target Start/End: Original strand, 34359 - 34479
Alignment:
| Q |
149 |
aaaattgggaattaagggttgatgatgactttgaaaagattagtgtcagaattgtgtctaatgtgttgtaattgggtg-tcataatgattccttaattct |
247 |
Q |
| |
|
|||||||||||||| ||||||||| ||| ||||||| || | |||| |||||| ||| ||||||||||||||| | || ||| ||||||| |||||| |
|
|
| T |
34359 |
aaaattgggaatta-gggttgatgctgattttgaaaggaatggtgtaagaattatgtttaatgtgttgtaatttgatgttcagaatgatttcttaatcta |
34457 |
T |
|
| Q |
248 |
taatgttgttgtaatcagaatt |
269 |
Q |
| |
|
|||||||| ||| ||||||||| |
|
|
| T |
34458 |
taatgttgctgtgatcagaatt |
34479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 285
Target Start/End: Complemental strand, 135446 - 135309
Alignment:
| Q |
149 |
aaaattgggaattaagggttgatgatgactttgaaaagattagtgtcagaattgtgtctaatgtgttgtaattgggtg-tcataatgattccttaattct |
247 |
Q |
| |
|
||||||||||| | |||||||||| ||| ||||||| || | |||| || || ||| ||||||||||||||| | || ||| ||||||| |||||| |
|
|
| T |
135446 |
aaaattgggaaattagggttgatgctgattttgaaaggaatggtgtaaggatcatgtttaatgtgttgtaatttgatgttcagaatgatttcttaatcta |
135347 |
T |
|
| Q |
248 |
taatgttgttgtaatcagaatttgagagagattagaat |
285 |
Q |
| |
|
|||||||||||| |||||||||||| || |||||||| |
|
|
| T |
135346 |
taatgttgttgtgatcagaatttgaatgaaattagaat |
135309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold2054 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold2054
Description:
Target: scaffold2054; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 769 - 717
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaa |
121 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||||||| |||||||||||| |
|
|
| T |
769 |
taaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaa |
717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0139
Description:
Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 14985 - 15051
Alignment:
| Q |
56 |
ttttcttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaatt |
123 |
Q |
| |
|
||||||||||| ||||||||||||||||| || || ||||||||||||||| |||||||||||||| |
|
|
| T |
14985 |
ttttcttctaa-ttaaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaatt |
15051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0034
Description:
Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 221
Target Start/End: Complemental strand, 73337 - 73186
Alignment:
| Q |
71 |
aggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattgg-ttgttcataaagataaaattgggaattaagggttg |
169 |
Q |
| |
|
||||||||||| ||||||||| |||||||| |||| | ||||| |||||||||||||||| || | | || | |||||||||||| |||||| || || |
|
|
| T |
73337 |
aggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaattaatctaataggatagctcttgaagataaaattgagaattagggtgtg |
73238 |
T |
|
| Q |
170 |
atgatgactttgaaaagattagtgtcagaattgtgtctaatgtgttgtaatt |
221 |
Q |
| |
|
||| ||| ||||||| | |||| ||||| ||| ||||||||||||||| |
|
|
| T |
73237 |
atgttgattttgaaagaaacggtgtaagaatcatgtttaatgtgttgtaatt |
73186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 79491 - 79549
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatc |
127 |
Q |
| |
|
||||||||||||| ||||||||| |||| || ||||||| |||||||||||||||||| |
|
|
| T |
79491 |
taaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaattaatc |
79549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 79073 - 79106
Alignment:
| Q |
50 |
gtgcgtttttcttctaaattaaggtaagggtgag |
83 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
79073 |
gtgcgtttttcttctaaattaaggtaagggtgag |
79106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 493029 - 493090
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaat |
131 |
Q |
| |
|
||||||||||||||||||||||| |||| ||| |||| | |||||||||||||||||||||| |
|
|
| T |
493029 |
taaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaattaatctaat |
493090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0317 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0317
Description:
Target: scaffold0317; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 201
Target Start/End: Complemental strand, 1441 - 1308
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaatt-ggttgttcataaagataaaattgggaattaagggt |
167 |
Q |
| |
|
|||||||||||||||| |||||| |||||||| | |||| ||||| |||||||| |||||||| |||||| | | ||||||| || |||||| || | |
|
|
| T |
1441 |
taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaattaaattgttcttgatgataaaactgagaattagggtt |
1342 |
T |
|
| Q |
168 |
tgatgatgactttgaaaagattagtgtcagaatt |
201 |
Q |
| |
|
||||| ||| ||||||| || | |||| |||||| |
|
|
| T |
1341 |
tgatgctgattttgaaaggaatggtgtaagaatt |
1308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0261
Description:
Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 23570 - 23631
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaa |
130 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| |||| | ||||||||||||||||||||| |
|
|
| T |
23570 |
taaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaattaatctaa |
23631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0249 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0249
Description:
Target: scaffold0249; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 13895 - 13960
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctg-aaaattaatctaattg |
133 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| |||||| |||||||| |||||||||||||||| |
|
|
| T |
13895 |
taaggtaagggtgggattatctttcaatgattataatatataatttctgaaaaattaatctaattg |
13960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0072 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0072
Description:
Target: scaffold0072; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 49971 - 50029
Alignment:
| Q |
69 |
taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatc |
127 |
Q |
| |
|
||||||||||||| ||||||||| |||| || ||||||| ||||||| |||||||||| |
|
|
| T |
49971 |
taaggtaagggtgggattatctttcaatagtcataatatgtaatttctaaaaattaatc |
50029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:
Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 165
Target Start/End: Original strand, 101920 - 102026
Alignment:
| Q |
61 |
ttctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg-gttgttcataaagat-aaaattggga |
158 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| |||| ||| || ||| |||| ||||||||| ||||||||| |||||| | || || |||||||||| |
|
|
| T |
101920 |
ttctgaattaaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattgaattgttcttgaaaataaaaattggga |
102019 |
T |
|
| Q |
159 |
attaagg |
165 |
Q |
| |
|
||||||| |
|
|
| T |
102020 |
attaagg |
102026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0138 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0138
Description:
Target: scaffold0138; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 12359 - 12298
Alignment:
| Q |
62 |
tctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaatt |
123 |
Q |
| |
|
|||||||||||||||||||||| || || |||||||| |||||| |||||||||||||| |
|
|
| T |
12359 |
tctaaattaaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaatt |
12298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 285
Target Start/End: Original strand, 40614 - 40751
Alignment:
| Q |
149 |
aaaattgggaattaagggttgatgatgactttgaaaagattagtgtcagaattgtgtctaatgtgttgtaattgggtg-tcataatgattccttaattct |
247 |
Q |
| |
|
||||||||||| | |||||||||| ||| ||||||| || | |||| || || ||| ||| ||||||||||| | || ||| ||||||| |||||| |
|
|
| T |
40614 |
aaaattgggaaattagggttgatgctgattttgaaaggaatggtgtaaggatcatgtttaacgtgttgtaatttgatgttcagaatgatttcttaatcta |
40713 |
T |
|
| Q |
248 |
taatgttgttgtaatcagaatttgagagagattagaat |
285 |
Q |
| |
|
|||||||| ||| |||||||||||| || |||||||| |
|
|
| T |
40714 |
taatgttgatgtgatcagaatttgaatgaaattagaat |
40751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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