View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12671_low_39 (Length: 214)

Name: NF12671_low_39
Description: NF12671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12671_low_39
NF12671_low_39
[»] chr7 (34 HSPs)
chr7 (11-214)||(26508995-26509198)
chr7 (11-214)||(26663198-26663401)
chr7 (11-214)||(26678390-26678593)
chr7 (11-214)||(31083909-31084113)
chr7 (11-214)||(26519454-26519657)
chr7 (34-214)||(16443291-16443472)
chr7 (11-214)||(11447535-11447738)
chr7 (11-214)||(45393866-45394069)
chr7 (34-214)||(16047981-16048162)
chr7 (11-214)||(26441891-26442094)
chr7 (33-214)||(16744806-16744987)
chr7 (11-214)||(16511735-16511939)
chr7 (11-214)||(4138531-4138734)
chr7 (11-214)||(24585822-24586025)
chr7 (70-214)||(5154768-5154912)
chr7 (47-214)||(26313149-26313317)
chr7 (11-214)||(26268372-26268574)
chr7 (70-214)||(2779929-2780073)
chr7 (47-214)||(31557690-31557858)
chr7 (47-214)||(4206058-4206225)
chr7 (85-214)||(31130616-31130746)
chr7 (70-214)||(3451936-3452080)
chr7 (70-214)||(10910236-10910380)
chr7 (70-214)||(11418089-11418233)
chr7 (47-214)||(26596338-26596506)
chr7 (79-214)||(5165078-5165213)
chr7 (70-214)||(2161257-2161400)
chr7 (70-214)||(22148573-22148717)
chr7 (70-214)||(22152800-22152944)
chr7 (70-214)||(22208715-22208859)
chr7 (34-214)||(10848253-10848434)
chr7 (79-214)||(39206450-39206585)
chr7 (79-214)||(45737995-45738130)
chr7 (11-214)||(5140623-5140826)
[»] chr8 (24 HSPs)
chr8 (11-214)||(29835976-29836179)
chr8 (11-214)||(12086094-12086297)
chr8 (11-214)||(28355318-28355521)
chr8 (11-214)||(19681109-19681312)
chr8 (11-214)||(31483237-31483440)
chr8 (34-214)||(22139563-22139744)
chr8 (11-214)||(33265373-33265576)
chr8 (70-214)||(2130650-2130794)
chr8 (70-214)||(15774260-15774404)
chr8 (70-214)||(33249049-33249193)
chr8 (79-214)||(18716177-18716312)
chr8 (79-214)||(18797404-18797539)
chr8 (36-214)||(19694767-19694946)
chr8 (81-214)||(16260635-16260768)
chr8 (81-214)||(19654708-19654841)
chr8 (79-214)||(22074294-22074429)
chr8 (70-214)||(21341552-21341697)
chr8 (11-214)||(31361181-31361385)
chr8 (11-214)||(44567633-44567837)
chr8 (11-214)||(9361257-9361459)
chr8 (70-214)||(14569841-14569985)
chr8 (47-214)||(19201749-19201917)
chr8 (70-214)||(27602295-27602439)
chr8 (87-214)||(19910549-19910676)
[»] chr2 (39 HSPs)
chr2 (11-214)||(39896717-39896920)
chr2 (11-214)||(3789091-3789294)
chr2 (11-214)||(13930002-13930205)
chr2 (11-214)||(19409875-19410078)
chr2 (11-214)||(37932025-37932228)
chr2 (11-214)||(16822729-16822932)
chr2 (11-214)||(16898548-16898751)
chr2 (11-214)||(21670564-21670767)
chr2 (11-214)||(16168126-16168329)
chr2 (11-214)||(27810351-27810554)
chr2 (11-214)||(32056400-32056603)
chr2 (11-214)||(34297797-34298000)
chr2 (11-214)||(254043-254246)
chr2 (11-214)||(9343378-9343581)
chr2 (11-214)||(11628576-11628779)
chr2 (11-214)||(34868282-34868485)
chr2 (34-214)||(21696580-21696761)
chr2 (11-214)||(37679289-37679492)
chr2 (11-214)||(37694554-37694757)
chr2 (11-214)||(37945256-37945459)
chr2 (34-214)||(27397005-27397186)
chr2 (69-214)||(34268314-34268459)
chr2 (11-214)||(22921535-22921738)
chr2 (70-214)||(23117481-23117625)
chr2 (11-214)||(12593462-12593665)
chr2 (11-214)||(39045273-39045477)
chr2 (70-212)||(20844600-20844742)
chr2 (70-214)||(28888939-28889083)
chr2 (79-214)||(27427864-27428000)
chr2 (79-214)||(31882987-31883122)
chr2 (14-214)||(27782874-27783074)
chr2 (79-214)||(37384371-37384506)
chr2 (70-214)||(12662175-12662320)
chr2 (85-214)||(12710015-12710144)
chr2 (79-214)||(19449803-19449939)
chr2 (79-214)||(27123216-27123351)
chr2 (70-214)||(31868200-31868344)
chr2 (11-214)||(40240171-40240374)
chr2 (85-214)||(34161563-34161692)
[»] chr5 (50 HSPs)
chr5 (11-214)||(15752161-15752364)
chr5 (11-214)||(30036081-30036284)
chr5 (11-214)||(33523039-33523242)
chr5 (11-214)||(37761629-37761832)
chr5 (11-214)||(40466852-40467055)
chr5 (11-214)||(13318129-13318332)
chr5 (11-214)||(32589578-32589781)
chr5 (69-214)||(22895120-22895265)
chr5 (11-214)||(3796188-3796391)
chr5 (47-214)||(6880984-6881151)
chr5 (47-214)||(31819724-31819891)
chr5 (34-214)||(23898552-23898734)
chr5 (11-214)||(11330289-11330492)
chr5 (11-214)||(18494071-18494274)
chr5 (11-214)||(30175123-30175326)
chr5 (70-214)||(24976538-24976682)
chr5 (11-214)||(5644455-5644658)
chr5 (11-214)||(28655900-28656103)
chr5 (87-214)||(37351967-37352094)
chr5 (34-214)||(25206966-25207147)
chr5 (34-214)||(25271122-25271303)
chr5 (47-214)||(9324154-9324322)
chr5 (70-214)||(9544031-9544175)
chr5 (70-214)||(22992444-22992588)
chr5 (70-214)||(23726931-23727075)
chr5 (70-214)||(24608939-24609083)
chr5 (47-214)||(26487064-26487232)
chr5 (47-214)||(33881797-33881964)
chr5 (85-214)||(37745652-37745781)
chr5 (79-214)||(8658796-8658931)
chr5 (47-214)||(12138853-12139020)
chr5 (11-214)||(13435972-13436175)
chr5 (47-214)||(28953098-28953265)
chr5 (85-214)||(31438166-31438295)
chr5 (70-214)||(18121737-18121881)
chr5 (70-214)||(23632664-23632808)
chr5 (47-214)||(30158711-30158878)
chr5 (47-214)||(34623190-34623357)
chr5 (93-214)||(13180120-13180241)
chr5 (85-214)||(24730678-24730807)
chr5 (70-214)||(11556048-11556192)
chr5 (70-214)||(15652064-15652208)
chr5 (70-214)||(30941324-30941468)
chr5 (11-214)||(18368833-18369036)
chr5 (79-214)||(41681408-41681545)
chr5 (89-214)||(33299249-33299374)
chr5 (79-214)||(2517768-2517903)
chr5 (70-214)||(33784176-33784320)
chr5 (79-214)||(37664807-37664942)
chr5 (11-175)||(43084909-43085073)
[»] chr4 (27 HSPs)
chr4 (11-214)||(54840050-54840253)
chr4 (11-214)||(21976363-21976566)
chr4 (11-213)||(5012540-5012742)
chr4 (11-214)||(20331838-20332041)
chr4 (11-214)||(31119913-31120116)
chr4 (11-214)||(33667204-33667407)
chr4 (34-214)||(1906949-1907130)
chr4 (34-214)||(15234500-15234681)
chr4 (11-214)||(24585774-24585978)
chr4 (11-214)||(30760423-30760626)
chr4 (11-214)||(40099036-40099239)
chr4 (70-214)||(14752919-14753063)
chr4 (79-214)||(14671717-14671852)
chr4 (70-214)||(17019747-17019891)
chr4 (47-214)||(27156729-27156896)
chr4 (79-214)||(15379641-15379776)
chr4 (70-214)||(36323740-36323884)
chr4 (70-214)||(36337949-36338093)
chr4 (79-214)||(5701256-5701391)
chr4 (79-214)||(15276029-15276164)
chr4 (69-214)||(6576553-6576699)
chr4 (11-214)||(14105203-14105406)
chr4 (79-214)||(39857342-39857477)
chr4 (85-214)||(18794046-18794175)
chr4 (70-214)||(34182360-34182504)
chr4 (70-214)||(24119359-24119504)
chr4 (181-214)||(24814704-24814737)
[»] chr3 (59 HSPs)
chr3 (11-214)||(24334788-24334991)
chr3 (11-214)||(6536187-6536390)
chr3 (11-214)||(17978395-17978598)
chr3 (11-214)||(18231804-18232007)
chr3 (11-214)||(10649683-10649885)
chr3 (11-214)||(51788634-51788837)
chr3 (47-214)||(28109407-28109575)
chr3 (11-214)||(29658411-29658614)
chr3 (11-214)||(47030068-47030271)
chr3 (11-214)||(5602757-5602960)
chr3 (70-214)||(15886184-15886328)
chr3 (70-214)||(18285823-18285967)
chr3 (70-214)||(18301124-18301268)
chr3 (11-214)||(5020323-5020526)
chr3 (11-214)||(5589800-5590003)
chr3 (11-214)||(16404236-16404439)
chr3 (11-214)||(28345783-28345986)
chr3 (69-214)||(16422855-16423000)
chr3 (70-214)||(4728275-4728419)
chr3 (70-214)||(5658783-5658927)
chr3 (70-214)||(6208544-6208688)
chr3 (70-214)||(8282927-8283071)
chr3 (70-214)||(11103828-11103972)
chr3 (70-214)||(29142221-29142365)
chr3 (70-214)||(31029710-31029854)
chr3 (70-214)||(35887409-35887553)
chr3 (47-214)||(5717703-5717870)
chr3 (47-214)||(5728613-5728780)
chr3 (47-214)||(5763588-5763755)
chr3 (11-214)||(20570300-20570503)
chr3 (11-214)||(31957900-31958103)
chr3 (11-214)||(32297243-32297446)
chr3 (69-214)||(19701065-19701210)
chr3 (39-214)||(4690292-4690468)
chr3 (70-214)||(5473638-5473782)
chr3 (70-214)||(18057917-18058061)
chr3 (79-214)||(22864308-22864443)
chr3 (79-214)||(22879367-22879502)
chr3 (69-214)||(4340143-4340288)
chr3 (85-214)||(4423582-4423711)
chr3 (70-214)||(4790098-4790242)
chr3 (70-214)||(18337273-18337417)
chr3 (70-214)||(22381047-22381191)
chr3 (70-214)||(32445801-32445945)
chr3 (87-214)||(15734583-15734710)
chr3 (70-214)||(4630430-4630574)
chr3 (47-214)||(17970324-17970492)
chr3 (11-214)||(10402764-10402967)
chr3 (34-214)||(15367877-15368059)
chr3 (79-214)||(20072693-20072828)
chr3 (11-214)||(21681332-21681535)
chr3 (79-214)||(48472590-48472725)
chr3 (34-214)||(16617934-16618116)
chr3 (79-214)||(22041087-22041223)
chr3 (47-214)||(8218273-8218440)
chr3 (85-214)||(18249404-18249533)
chr3 (47-214)||(28027919-28028086)
chr3 (70-174)||(7079877-7079981)
chr3 (180-214)||(16599394-16599428)
[»] chr6 (45 HSPs)
chr6 (11-175)||(27623108-27623272)
chr6 (11-214)||(28214094-28214297)
chr6 (11-214)||(30551350-30551553)
chr6 (14-175)||(27283763-27283924)
chr6 (11-214)||(34457856-34458059)
chr6 (70-214)||(27209584-27209728)
chr6 (70-214)||(27239500-27239644)
chr6 (11-214)||(27064127-27064330)
chr6 (11-214)||(29579660-29579863)
chr6 (70-214)||(16756506-16756650)
chr6 (11-214)||(4779537-4779740)
chr6 (79-214)||(24870402-24870537)
chr6 (11-214)||(27355453-27355656)
chr6 (70-214)||(24299131-24299275)
chr6 (70-214)||(33369800-33369944)
chr6 (87-214)||(4539129-4539256)
chr6 (87-214)||(15405901-15406028)
chr6 (87-214)||(15417688-15417815)
chr6 (79-214)||(22928225-22928360)
chr6 (70-214)||(14138771-14138915)
chr6 (70-214)||(29508106-29508250)
chr6 (47-214)||(13517564-13517731)
chr6 (11-214)||(26666007-26666210)
chr6 (11-214)||(26771978-26772181)
chr6 (85-214)||(4764462-4764591)
chr6 (85-214)||(27200897-27201026)
chr6 (85-214)||(27248207-27248336)
chr6 (70-214)||(27025827-27025971)
chr6 (70-214)||(27031706-27031850)
chr6 (85-214)||(26792516-26792645)
chr6 (70-214)||(26927437-26927581)
chr6 (70-214)||(27014409-27014553)
chr6 (70-214)||(13292315-13292460)
chr6 (87-214)||(26109771-26109899)
chr6 (11-214)||(8899047-8899250)
chr6 (47-214)||(27491800-27491968)
chr6 (70-214)||(29556241-29556385)
chr6 (47-214)||(4531956-4532123)
chr6 (11-214)||(16680785-16680988)
chr6 (79-214)||(28167188-28167323)
chr6 (36-214)||(16937376-16937554)
chr6 (117-214)||(20131252-20131349)
chr6 (117-214)||(22201521-22201618)
chr6 (158-211)||(20175335-20175388)
chr6 (158-211)||(22160603-22160656)
[»] scaffold0038 (1 HSPs)
scaffold0038 (11-214)||(14592-14795)
[»] chr1 (15 HSPs)
chr1 (11-214)||(51644874-51645077)
chr1 (11-214)||(10951744-10951947)
chr1 (34-214)||(20333820-20334001)
chr1 (34-210)||(20467458-20467635)
chr1 (70-214)||(21891153-21891297)
chr1 (11-214)||(28591733-28591936)
chr1 (34-214)||(16201434-16201615)
chr1 (70-214)||(14692320-14692464)
chr1 (70-214)||(14695002-14695146)
chr1 (70-214)||(14697686-14697830)
chr1 (70-214)||(14700367-14700511)
chr1 (85-214)||(10969369-10969498)
chr1 (11-214)||(3647799-3648002)
chr1 (79-214)||(41786737-41786872)
chr1 (79-214)||(28156425-28156560)
[»] scaffold0322 (2 HSPs)
scaffold0322 (11-214)||(2307-2510)
scaffold0322 (34-214)||(12722-12904)
[»] scaffold0159 (2 HSPs)
scaffold0159 (11-214)||(2580-2783)
scaffold0159 (11-135)||(18458-18582)
[»] scaffold0093 (1 HSPs)
scaffold0093 (34-214)||(444-625)
[»] scaffold0240 (1 HSPs)
scaffold0240 (70-214)||(24377-24521)
[»] scaffold0143 (2 HSPs)
scaffold0143 (11-214)||(10568-10772)
scaffold0143 (70-214)||(33981-34125)
[»] scaffold0241 (1 HSPs)
scaffold0241 (79-214)||(25973-26108)
[»] scaffold0336 (1 HSPs)
scaffold0336 (11-214)||(16226-16429)
[»] scaffold0109 (1 HSPs)
scaffold0109 (34-214)||(27966-28145)
[»] scaffold0237 (1 HSPs)
scaffold0237 (79-214)||(8344-8479)
[»] scaffold0547 (1 HSPs)
scaffold0547 (70-214)||(9064-9209)
[»] scaffold0792 (1 HSPs)
scaffold0792 (70-214)||(4019-4163)
[»] scaffold0418 (1 HSPs)
scaffold0418 (70-214)||(12725-12869)
[»] scaffold0099 (1 HSPs)
scaffold0099 (70-205)||(40032-40171)
[»] scaffold0089 (1 HSPs)
scaffold0089 (70-126)||(6751-6807)


Alignment Details
Target: chr7 (Bit Score: 176; Significance: 5e-95; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 26509198 - 26508995
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  26509198 cacagatgcgatatctacaacatacccagcactgaaatgcccagcataacggcgttatccccagtcgggtcttccaagattctacccccagcaagttgat 26509099  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  26509098 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttccaggaatgtgtaatgtagcacgagccactacgtg 26508999  T
Q  211 ccca 214  Q
    ||||    
T  26508998 ccca 26508995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 26663401 - 26663198
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||      
T  26663401 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgca 26663302  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  26663301 tacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 26663202  T
Q  211 ccca 214  Q
    ||||    
T  26663201 ccca 26663198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 26678593 - 26678390
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||      
T  26678593 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgca 26678494  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  26678493 tacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 26678394  T
Q  211 ccca 214  Q
    ||||    
T  26678393 ccca 26678390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 31084113 - 31083909
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatcccca-gcaagttga 109  Q
    ||||||||||||||||||||| |||||||| |||| |||||||||| |||| ||||  |||| || | ||||  |||||||||||||||| ||||||||     
T  31084113 cacagatgcgatatctacgacatacccagcgctgacatgcccagcacaacggcgttttccccggtggagtctctcaagattctatccccaagcaagttgt 31084014  T
Q  110 ttagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgt 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||||    
T  31084013 ttagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgt 31083914  T
Q  210 gccca 214  Q
    |||||    
T  31083913 gccca 31083909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 26519454 - 26519657
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||| |||| ||||  |||||||   |||||||||||||||||| |||||||||||      
T  26519454 cacagatgcaatgtctacaacgtacccagcactgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgca 26519553  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || || ||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  26519554 tacctgcctgccctcagccttggctccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 26519653  T
Q  211 ccca 214  Q
    ||||    
T  26519654 ccca 26519657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 34 - 214
Target Start/End: Complemental strand, 16443472 - 16443291
Alignment:
Q  34 acccagcactgaaatgcccagca-taacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatg 132  Q
    ||||||||||||||||||||||| | ||| | ||| ||||||  | ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||    
T  16443472 acccagcactgaaatgcccagcaatgacggcattatccccagcagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatg 16443373  T
Q  133 gttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||    
T  16443372 gctccgatacgtctcccaacgacgttatctccaaagaggatttccaggaatgtgtaatatagcacgagccactacatgccca 16443291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 11447535 - 11447738
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| |||||||| |||||||||||||||||| |||| ||||  |||||||   |||||||||||||||||| |||||||||||      
T  11447535 cacagatgcaatgtctacaacgtacccggcactgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgca 11447634  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || || ||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  11447635 tacctgcctgccctcagccttggctccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 11447734  T
Q  211 ccca 214  Q
    ||||    
T  11447735 ccca 11447738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 45393866 - 45394069
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    |||||||||||| | ||| || ||||||| |||||||||||||||| |||| ||||  |||||||   |||||||||||||||||| |||||||||||      
T  45393866 cacagatgcgatgtttacaacttacccaggactgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgca 45393965  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||  || ||||||||||| ||||| |||||||||||||    
T  45393966 tagctacctgccctcagccatggttccgatacgtctctcaacgacgtcatctccaaagaggattcccaagaatgtgtaatatagcatgagccactacgtg 45394065  T
Q  211 ccca 214  Q
    ||||    
T  45394066 ccca 45394069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 16047981 - 16048162
Alignment:
Q  34 acccagcactgaaatgcccagc-ataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatg 132  Q
    ||||| |||||||||||||||| || ||| | ||| |||||   | ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||    
T  16047981 acccaacactgaaatgcccagcgatgacggcattatccccaacagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatg 16048080  T
Q  133 gttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  16048081 gttccgatacgtctcccaacgactttatctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgccca 16048162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 26441891 - 26442094
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || ||||||| |||||||||||||||| |||| ||||  |||| || ||||||  ||||||||||||||||||||||||      
T  26441891 cacagatgcaatgtctacaacatacccagtactgaaatgcccagcacaacggcgttttccccggtggggtctctcaagattctatccccagcaagttgca 26441990  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||| |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||||| |||||||||||||||||||    
T  26441991 tacctaccggccctcggccatggttccgatacgtctcccaacgacgtcatctccatagaggatttccaagaatgtgtaatatagcacgagccactacgtg 26442090  T
Q  211 ccca 214  Q
    ||||    
T  26442091 ccca 26442094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 33 - 214
Target Start/End: Complemental strand, 16744987 - 16744806
Alignment:
Q  33 tacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatg 132  Q
    |||||||| ||||||||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||  || ||||||||||||||| |||    
T  16744987 tacccagcgctgaaatgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatg 16744888  T
Q  133 gttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||  ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  16744887 gttccgtcacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgccca 16744806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 16511939 - 16511735
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagca-taacgacgttacccccagtcgggtcttccaagattctatccccagcaagttga 109  Q
    ||||||||||| ||| ||||   | ||||||||||||||||| ||| | ||| | |||  |||||| | ||||||| ||||||||||||||||||||||     
T  16511939 cacagatgcgacatccacgatacatccagcactgaaatgcccggcaatgacggcattattcccagtagagtcttccgagattctatccccagcaagttgc 16511840  T
Q  110 ttagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgt 209  Q
     || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| || |||||    
T  16511839 ataactacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaggaatgtgtaatatagcacgagtcattacgt 16511740  T
Q  210 gccca 214  Q
    |||||    
T  16511739 gccca 16511735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 4138734 - 4138531
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    |||||||||||| | ||| || ||||||| |||||||||||||||| |||| ||||  ||||||| | | ||  |||||||||||| |||||||||||      
T  4138734 cacagatgcgatgtttacaacttacccagtactgaaatgcccagcacaacggcgttttccccagtggagcctctcaagattctatctccagcaagttgca 4138635  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || || |||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  4138634 tacctgcctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 4138535  T
Q  211 ccca 214  Q
    ||||    
T  4138534 ccca 4138531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 24586025 - 24585822
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    |||||||||||| | ||| || ||||||| |||||||||||||||| |||| ||||  ||||||| | | ||  |||||||||||| |||||||||||      
T  24586025 cacagatgcgatgtttacaacttacccagtactgaaatgcccagcacaacggcgttttccccagtggagcctctcaagattctatctccagcaagttgca 24585926  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||| ||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  24585925 tatctacctgccttcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 24585826  T
Q  211 ccca 214  Q
    ||||    
T  24585825 ccca 24585822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 5154768 - 5154912
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  5154768 cccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgacacgtctcccaacgacgtcatctccaaaga 5154867  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  5154868 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 5154912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 47 - 214
Target Start/End: Complemental strand, 26313317 - 26313149
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatcccca-gcaagttgattagctacctgccctcagccatggttccgatacgtc 145  Q
    |||||||||| |||| ||||  |||| || | ||||  |||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||    
T  26313317 atgcccagcacaacggcgttttccccggtggagtctctcaagattctatccccaagcaagttgtttagttacctgccctcagccatggttccgatacgtc 26313218  T
Q  146 tcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  26313217 tcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgccca 26313149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 26268574 - 26268372
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || ||||||| |||||||||||||||| |||| ||||  |||||||   |||||||||||||||||| |||||||||||      
T  26268574 cacagatgcaatgtctacaacatacccagtactgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgca 26268475  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || || |||||||||||||  ||| |||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  26268474 tacctgcctgccctcagcctaggt-ccgaaacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 26268376  T
Q  211 ccca 214  Q
    ||||    
T  26268375 ccca 26268372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 2779929 - 2780073
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  |  |||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||    
T  2779929 cccagtagagtcttccgagattctatccccagcaagttgcatgcctacctgccctcagccatggttccgatacgtctcccaacggcgtcatcttcaaaga 2780028  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  2780029 ggatttccaggaatgtgtaatatagcacgagccactacgtgccca 2780073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 47 - 214
Target Start/End: Complemental strand, 31557858 - 31557690
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatcccca-gcaagttgattagctacctgccctcagccatggttccgatacgtc 145  Q
    |||||||||| |||| ||||  |||||||   |||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||    
T  31557858 atgcccagcacaacggcgttttccccagtaaagtcttccaagattctatccccaagcaagttgtttacctacctgccctcagccatggttccgatacgtc 31557759  T
Q  146 tcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||||  ||||||||||||||||| || ||| ||||||| |||||||||| ||||||||||||    
T  31557758 tcccaacgacgccatctccaaagaggatttccaagaaggtgtaatatagcacgagctactacgtgccca 31557690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 4206058 - 4206225
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtct 146  Q
    |||||||||| |||| ||||  |||| || | ||||  ||||||||||||||||||||||||  || |||||||||||| ||||||||||||  ||||||    
T  4206058 atgcccagcacaacggcgttttccccggtggagtctctcaagattctatccccagcaagttgcatacctacctgccctcggccatggttccggcacgtct 4206157  T
Q  147 cccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  4206158 cccaacgacgtcatctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgccca 4206225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 85 - 214
Target Start/End: Original strand, 31130616 - 31130746
Alignment:
Q  85 caagattctatccccagcaagttgattagctacctgccctcagccat-ggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaat 183  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||| || ||||    
T  31130616 caagattctatccccagcaagttgcatagctacctgccctcagccattggttccaatacgtctcccaacgacgtcatctccaaagaggatttccaagaat 31130715  T
Q  184 gtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||| |||||||||||||||||||||||    
T  31130716 gtgtaatatagcacgagccactacgtgccca 31130746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 3451936 - 3452080
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  || |||||||||||||||| ||| |||| |||||||||||||||||| |||||||||||    
T  3451936 cccagtagagtcttccgagattctatccccagcaagttgcatacctacctgccctcagccttggctccggtacgtctcccaacgacgtcatctccaaaga 3452035  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  3452036 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 3452080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 10910380 - 10910236
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || ||||||||||| ||||||||||  |||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  10910380 cccagtagagtctcccgagattctatcctcagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacaacgtcatctccaaaga 10910281  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||| ||||||||||    
T  10910280 ggatttccaggaatgtgtaatatagcacgagccattacgtgccca 10910236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 11418233 - 11418089
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| |||||||||||||||||||||||||  |||||||| ||||||||||  ||| |||||||||||||||||||||| |||||||||||    
T  11418233 cccagtagagtctcccaagattctatccccagcaagttgcatagctaccggccctcagcctaggtcccgatacgtctcccaacgacgtcatctccaaaga 11418134  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||    
T  11418133 ggatttccaggaatgcgtaatatagcacgagccactacgtgccca 11418089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 26596338 - 26596506
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccat-ggttccgatacgtc 145  Q
    |||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||  || ||||||||||||||| || |||||||| |||||    
T  26596338 atgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctattggttccgacacgtc 26596437  T
Q  146 tcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||||| ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||    
T  26596438 tcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcatgagccactacgtgccca 26596506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 5165078 - 5165213
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    |||| |||||| ||||||||||||||||||  |||||||| ||||||||||  ||| |||||||||||||||||||||| ||||||||||||||||| ||    
T  5165078 gtctcccaagactctatccccagcaagttgcatagctaccggccctcagcctaggtcccgatacgtctcccaacgacgtcatctccaaagaggatttcca 5165177  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||||| |||||||||||||||||||||||    
T  5165178 ggaatgtgtaatatagcacgagccactacgtgccca 5165213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 2161257 - 2161400
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || ||||||||||||||||||||||  ||||||| ||||||||||||||||||||| |||||||||||||||||  ||||||||||    
T  2161257 cccagtagagtctcccgagattctatccccagcaagttgcatagctac-tgccctcagccatggttccgacacgtctcccaacgacgtcgtctccaaaga 2161355  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  2161356 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 2161400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 22148573 - 22148717
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| |||| ||||||||||| |||||  |  ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  22148573 cccagtagagtcttccgagatcctatccccagccagttgcatgcctacctgccctcagccagggttccgatacgtctcccaacgacgtcatctccaaaga 22148672  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  22148673 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 22148717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 22152800 - 22152944
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| |||| ||||||||||| |||||  |  ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  22152800 cccagtagagtcttccgagatcctatccccagccagttgcatgcctacctgccctcagccagggttccgatacgtctcccaacgacgtcatctccaaaga 22152899  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  22152900 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 22152944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 22208715 - 22208859
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| |||| ||||||||||| |||||  |  ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  22208715 cccagtagagtcttccgagatcctatccccagccagttgcatgcctacctgccctcagccagggttccgatacgtctcccaacgacgtcatctccaaaga 22208814  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  22208815 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 22208859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 10848253 - 10848434
Alignment:
Q  34 acccagcactgaaatgcccagc-ataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatg 132  Q
    ||||| |||||||||||||||| || ||| | ||| | ||||  | ||||||| ||||||| |||||||||||| |  |||| ||| |||||||||||||    
T  10848253 acccaacactgaaatgcccagcgatgacggcattatctccagcagagtcttccgagattctgtccccagcaagtcgcgtagcaacccgccctcagccatg 10848352  T
Q  133 gttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||||||||||| ||||||||||||||||||||||| || |||||||| || |||| ||||||||||||||||||    
T  10848353 gttccgatacgtctcccaatgacgttatctccaaagaggatttccaagaatgtgtgatatagcgcgagccactacgtgccca 10848434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 39206585 - 39206450
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    |||| |||||||||||||| ||||||||||  |||||||| ||||||||||  ||| |||| ||||||||||||||||| ||||||||||||||||| ||    
T  39206585 gtctcccaagattctatcctcagcaagttgcatagctaccggccctcagcctaggtcccgaaacgtctcccaacgacgtcatctccaaagaggatttcca 39206486  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     ||||||||||| |||||||||||||||||||||||    
T  39206485 agaatgtgtaatatagcacgagccactacgtgccca 39206450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 45737995 - 45738130
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    |||| ||||||||||||||||||||| |||  |||||||| ||||||||||  ||| |||| ||||||||||||||||| ||||||||||||||||| ||    
T  45737995 gtctcccaagattctatccccagcaaattgcatagctaccggccctcagcctaggtcccgaaacgtctcccaacgacgtcatctccaaagaggatttcca 45738094  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     ||||||||||| |||||||||||||||||||||||    
T  45738095 agaatgtgtaatatagcacgagccactacgtgccca 45738130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 5140826 - 5140623
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || ||||||||| |||||||||||||| |||| ||||  ||||  | | ||||  ||||| | |||||||||||||||       
T  5140826 cacagatgcaatgtctacaacatacccagcattgaaatgcccagcacaacggcgttttccccgttggagtctctcaagactttatccccagcaagttaca 5140727  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||| |||||| ||||||||||||||||||||||||| ||||| ||||||| ||||||| | |  ||||||||||  |||||||||||||||||||    
T  5140726 tacctaccggccctcggccatggttccgatacgtctcccaatgacgtcatctccatagaggatctccgagaatgtgtaacatagcacgagccactacgtg 5140627  T
Q  211 ccca 214  Q
    ||||    
T  5140626 ccca 5140623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 2e-73; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 29835976 - 29836179
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| ||||  |||||||||||||||||||||||||||| |||||||||||      
T  29835976 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcgttttccccagtcgggtcttccaagattctatctccagcaagttgca 29836075  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  29836076 tacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 29836175  T
Q  211 ccca 214  Q
    ||||    
T  29836176 ccca 29836179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 12086297 - 12086094
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||  |||||||   | ||||| |||||| ||  |||||||||||      
T  12086297 cacagatgcgatgtctacaacgtacccagcactgaaatgcccagcataacggcgttttccccagtaaagccttccgagattcaatttccagcaagttgta 12086198  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  12086197 tagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 12086098  T
Q  211 ccca 214  Q
    ||||    
T  12086097 ccca 12086094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 28355521 - 28355318
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||      
T  28355521 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgca 28355422  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  28355421 tatctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 28355322  T
Q  211 ccca 214  Q
    ||||    
T  28355321 ccca 28355318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 19681109 - 19681312
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||| |||| ||||  |||||||   |||||||||||||||||| |||||||||||      
T  19681109 cacagatgcaatgtctacaacgtacccagcactgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgca 19681208  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || || ||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  19681209 tacctgcctgccctcagccttggctccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 19681308  T
Q  211 ccca 214  Q
    ||||    
T  19681309 ccca 19681312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 31483440 - 31483237
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || ||||||| |||||||||||||||| |||| ||||  |||||||   |||||||||||||||||| ||||||| |||      
T  31483440 cacagatgcaatgtctacaacatacccagtactgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatctccagcaaattgca 31483341  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  31483340 tatctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 31483241  T
Q  211 ccca 214  Q
    ||||    
T  31483240 ccca 31483237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 22139563 - 22139744
Alignment:
Q  34 acccagcactgaaatgcccagca-taacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatg 132  Q
    |||| |||||||||||||| | | | ||||| ||| ||||||| | ||||||| ||||||| ||||||||||||||  ||||||||||||||||| ||||    
T  22139563 acccggcactgaaatgcccggtaatgacgacattatccccagtagagtcttccgagattctgtccccagcaagttgtatagctacctgccctcagtcatg 22139662  T
Q  133 gttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  22139663 gttccgataagtctcccaacgacgttatctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgccca 22139744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 33265373 - 33265576
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || ||||||||  |||||||||||||| |||| ||||  |||||||   ||||  ||||||||||||||||||||||||      
T  33265373 cacagatgcaatgtctacaacatacccagctttgaaatgcccagcacaacggcgttttccccagtaaagtctctcaagattctatccccagcaagttgca 33265472  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || |||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||| || ||||||||||| |||||||||||||||||||    
T  33265473 tacctacctgccctcagccatggttccaatacgtctcccaacgacgtcatttccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 33265572  T
Q  211 ccca 214  Q
    ||||    
T  33265573 ccca 33265576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 2130794 - 2130650
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  2130794 cccagtagagtcttccgagattctatccccagcaagttgcatagctatctgccctcagccatggtcccgatacgtctcccaacgacgtcatctccaaaga 2130695  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  2130694 ggatttccaggaatgtgtaatatagcacgagccactacgtgccca 2130650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 15774260 - 15774404
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  || ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  15774260 cccagtagagtcttccgagattctatccccagcaagttgcatacctacctgccctcagccatggtcccgatacgtctcccaacgacgtcatctccaaaga 15774359  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  15774360 ggatttccaggaatgtgtaatgtagcacgagccactacgtgccca 15774404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 33249049 - 33249193
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||||||||||||||||||||||||||  |||||||| |||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  33249049 cccagtagagtcttccaagattctatccccagcaagttgcatagctaccggccctcagccttggtcccgatacgtctcccaacgacgtcatctccaaaga 33249148  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  33249149 ggatttccaggaatgtgtaatatagcacgagccactacgtgccca 33249193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 18716177 - 18716312
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||    
T  18716177 gtctcccaagattctatccccagcaagttgcatagctacctgccctcagccatggttccgacacgtctcccaacgacgtcatctccaaagaggatttcca 18716276  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     ||||||||||| |||||||||||||||||||||||    
T  18716277 agaatgtgtaatatagcacgagccactacgtgccca 18716312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 18797404 - 18797539
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    |||| ||||||||||||||  |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  18797404 gtctcccaagattctatccttagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttcca 18797503  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||||| |||||||||||||||||||||||    
T  18797504 ggaatgtgtaatatagcacgagccactacgtgccca 18797539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 36 - 214
Target Start/End: Original strand, 19694767 - 19694946
Alignment:
Q  36 ccagcactgaaatgcccagca-taacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggt 134  Q
    ||||||||||||||||| ||| | ||| | |||  |||||| | ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  19694767 ccagcactgaaatgcccggcaatgacggcattattcccagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggt 19694866  T
Q  135 tccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||| || ||||||||| ||||||||||    
T  19694867 tccgatacgtctctcaacgacgtcatctccaaagaggatttccaggaatgtgtaatataacacgagccattacgtgccca 19694946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 16260635 - 16260768
Alignment:
Q  81 cttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacagg 180  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  16260635 cttccgagattctatccccagcaagttgcatagctacctgccctcagtcatggttccgataagtctcccaacgacgttatctccaaagaggatttccagg 16260734  T
Q  181 aatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||| |||||||||||| ||||||||||    
T  16260735 aatgtgtaatatagcacgagccattacgtgccca 16260768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 81 - 214
Target Start/End: Complemental strand, 19654841 - 19654708
Alignment:
Q  81 cttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacagg 180  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  19654841 cttccgagattctatccccagcaagttgcatagctacctgccctcagtcatggttccgataagtctcccaacgacgttatctccaaagaggatttccagg 19654742  T
Q  181 aatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||| |||||||||||| ||||||||||    
T  19654741 aatgtgtaatatagcacgagccattacgtgccca 19654708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 22074429 - 22074294
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||    
T  22074429 gtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgttatatccaaagaggatttcca 22074330  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     |||||||| || |||||||||||||||||||||||    
T  22074329 agaatgtgtgatatagcacgagccactacgtgccca 22074294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 21341697 - 21341552
Alignment:
Q  70 cccagtcgggtcttccaagattctatcccca-gcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaag 168  Q
    |||||| | ||||||| ||||||||||| || ||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  21341697 cccagtagagtcttccgagattctatcctcaagcaagttgcatagctacctgccctcagccatggttccgacacgtctcccaacgacgtcatctccaaag 21341598  T
Q  169 aggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||    
T  21341597 aggatttccaggaatgtgtaatatagcacgagccactacgtgccca 21341552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 31361181 - 31361385
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatcccc-agcaagttga 109  Q
    ||||||||| || ||||| || ||||||||  |||||||||||||| |||| ||||  |||| || | ||||  ||||| | ||||||| |||||||||     
T  31361181 cacagatgcaatgtctacaacatacccagcgttgaaatgcccagcacaacggcgttttccccggtggagtctctcaagactttatcccccagcaagttgc 31361280  T
Q  110 ttagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgt 209  Q
     || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |  ||||||||||| ||||||||||||||||||    
T  31361281 atacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccgagaatgtgtaatatagcacgagccactacgt 31361380  T
Q  210 gccca 214  Q
    |||||    
T  31361381 gccca 31361385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 44567633 - 44567837
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || ||||||||  |||||||||||||| |||| ||||  |||||||   |||||||||||||||||  |||||||||||      
T  44567633 cacagatgcaatgtctacaacatacccagctttgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatttccagcaagttgca 44567732  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttac-aggaatgtgtaatctagcacgagccactacgt 209  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||| | || |||||||||| |||| |||||| ||||||    
T  44567733 tagctacctgtcctcagccatggttccgaaacgtctcccaacgacgtcatctccaaagaggatttccaagaaatgtgtaatatagcgcgagccgctacgt 44567832  T
Q  210 gccca 214  Q
    |||||    
T  44567833 gccca 44567837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 9361257 - 9361459
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||||||||| ||||||||||||||||||||| |||| ||||  |||| || | ||||  ||||| |||||||||||| ||||       
T  9361257 cacagatgcaatgtctacgacgtatccagcactgaaatgcccagcacaacggcgttttccccggtggagtctctcaagactctatccccagccagttaca 9361356  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||| ||||||||| ||||| |||||||||| ||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  9361357 tacctaccggccctcagctatggt-ccgatacgtcccccaacgacgtcatctccaaagaggattttcaagaatgtgtaatatagcacgagccactacgtg 9361455  T
Q  211 ccca 214  Q
    ||||    
T  9361456 ccca 9361459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 14569841 - 14569985
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| |||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14569841 cccagtagagtcttccgagattctatccccagcgagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaaga 14569940  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||| | ||||||||||||||  |||||||    
T  14569941 ggatttccaagaatgtgtagtatagcacgagccactgtgtgccca 14569985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 47 - 214
Target Start/End: Complemental strand, 19201917 - 19201749
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatcccca-gcaagttgattagctacctgccctcagccatggttccgatacgtc 145  Q
    |||||||||| |||| ||||  |||| || | ||||  |||||||||||||||| |||||||| |||| ||||||||||||||  ||||||||| |||||    
T  19201917 atgcccagcacaacggcgttttccccggtggagtctctcaagattctatccccaagcaagttgtttagttacctgccctcagctgtggttccgacacgtc 19201818  T
Q  146 tcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  19201817 tcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgccca 19201749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 27602439 - 27602295
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| ||||||||||||||  |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  27602439 cccagtagagtctcccaagattctatccttagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcagctccaaaga 27602340  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||  ||||||||    
T  27602339 ggatttccaagaatgtgtaatatagcacgagccaccgcgtgccca 27602295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 87 - 214
Target Start/End: Complemental strand, 19910676 - 19910549
Alignment:
Q  87 agattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtg 186  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| || |||||||    
T  19910676 agattctatcctcagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtg 19910577  T
Q  187 taatctagcacgagccactacgtgccca 214  Q
    |||| ||||||||||||||  |||||||    
T  19910576 taatatagcacgagccactgtgtgccca 19910549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 140; Significance: 2e-73; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 39896717 - 39896920
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||||||||| || ||||||||||||||||||||||||||| |||| ||||  |||||||   ||||||||||||||||||||||||||||||      
T  39896717 cacagatgcgatatccacaacgtacccagcactgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatccccagcaagttgca 39896816  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  39896817 tacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 39896916  T
Q  211 ccca 214  Q
    ||||    
T  39896917 ccca 39896920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 3789091 - 3789294
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||| ||||||||||||||| |||| ||||  ||||||||||||||||||||||||||||||||||||| ||      
T  3789091 cacagatgcaatgtctacaacatacccagcgctgaaatgcccagcacaacggcgttttccccagtcgggtcttccaagattctatccccagcaagatgca 3789190  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  3789191 tagctacctgccctcagccatggttccgaaacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 3789290  T
Q  211 ccca 214  Q
    ||||    
T  3789291 ccca 3789294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 13930205 - 13930002
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||| ||||||||||||||||| |||| ||||  |||||||| ||||| ||||||||||||| ||||||||||| |    
T  13930205 cacagatgcaatgtctacaacatacccaacactgaaatgcccagcacaacggcgttctccccagtcaggtctcccaagattctatctccagcaagttgtt 13930106  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  13930105 tagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 13930006  T
Q  211 ccca 214  Q
    ||||    
T  13930005 ccca 13930002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 19410078 - 19409875
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| ||||  ||||||| ||||||||||||||||||||||||||||| ||      
T  19410078 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcgttttccccagtggggtcttccaagattctatccccagcaagatgca 19409979  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||| |||||||||||||||||||    
T  19409978 tagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatccccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 19409879  T
Q  211 ccca 214  Q
    ||||    
T  19409878 ccca 19409875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 37932025 - 37932228
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||| ||||||||||||||| |||| ||||  ||||||||||||||||||||||||||||||||||||| ||      
T  37932025 cacagatgcaatgtctacaacatacccagcgctgaaatgcccagcacaacggcgttttccccagtcgggtcttccaagattctatccccagcaagatgca 37932124  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  37932125 tagctacctgccctcagccatggttccgaaacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 37932224  T
Q  211 ccca 214  Q
    ||||    
T  37932225 ccca 37932228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 16822932 - 16822729
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||| ||||||||||||||| |||| ||||  |||| |||||||||||||||||||||||||||||||| ||      
T  16822932 cacagatgcaatgtctacaacatacccagcgctgaaatgcccagcacaacggcgttttccccggtcgggtcttccaagattctatccccagcaagatgca 16822833  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  16822832 tagctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 16822733  T
Q  211 ccca 214  Q
    ||||    
T  16822732 ccca 16822729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 16898548 - 16898751
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||| ||||||||||||||| |||| ||||  |||| |||||||||||||||||||||||||||||||| ||      
T  16898548 cacagatgcaatgtctacaacatacccagcgctgaaatgcccagcacaacggcgttttccccggtcgggtcttccaagattctatccccagcaagatgca 16898647  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  16898648 tagctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 16898747  T
Q  211 ccca 214  Q
    ||||    
T  16898748 ccca 16898751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 21670767 - 21670564
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| ||||  |||||||| ||||||||||||||||||| |||||||||||      
T  21670767 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcgttttccccagtcaggtcttccaagattctatctccagcaagttgca 21670668  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  21670667 tatctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 21670568  T
Q  211 ccca 214  Q
    ||||    
T  21670567 ccca 21670564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 16168126 - 16168329
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||      
T  16168126 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgca 16168225  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  16168226 tatctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 16168325  T
Q  211 ccca 214  Q
    ||||    
T  16168326 ccca 16168329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 27810351 - 27810554
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||      
T  27810351 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgca 27810450  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  27810451 tatctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 27810550  T
Q  211 ccca 214  Q
    ||||    
T  27810551 ccca 27810554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 32056400 - 32056603
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||| ||||||||||||||| |||| ||||  |||| |||||||||||||||||||||||||||||||| ||      
T  32056400 cacagatgcaatgtctacaacatacccagcgctgaaatgcccagcacaacggcgttttccccggtcgggtcttccaagattctatccccagcaagatgca 32056499  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    |||||||||||||||||| |||||||||| || |||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  32056500 tagctacctgccctcagctatggttccgacacatctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 32056599  T
Q  211 ccca 214  Q
    ||||    
T  32056600 ccca 32056603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 34297797 - 34298000
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| | ||   |||||| | ||||||| ||||||||||||||||||||||      
T  34297797 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcatttttcccagtagagtcttccgagattctatccccagcaagttgca 34297896  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  34297897 tacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 34297996  T
Q  211 ccca 214  Q
    ||||    
T  34297997 ccca 34298000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 254246 - 254043
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || ||||||||||||||||| |||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||      
T  254246 cacagatgcaatgtctacaacatacccagcactgaaatgtccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgta 254147  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  254146 tatctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 254047  T
Q  211 ccca 214  Q
    ||||    
T  254046 ccca 254043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 9343581 - 9343378
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||      
T  9343581 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgca 9343482  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||| |||||||||    
T  9343481 tatctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagtcactacgtg 9343382  T
Q  211 ccca 214  Q
    ||||    
T  9343381 ccca 9343378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 11628779 - 11628576
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || |||||||| ||||||||||||||||||| |||| |||| ||||  |||| || | ||||  ||||||||||||||||||||||||      
T  11628779 cacagatgcaatgtctacgacttacccagcactgaaatgcctagcacaacggcgttttccccggtggagtctctcaagattctatccccagcaagttgca 11628680  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  11628679 tacctacctgccctcagccatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 11628580  T
Q  211 ccca 214  Q
    ||||    
T  11628579 ccca 11628576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 34868282 - 34868485
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||| |||| ||||  |||||||   |||||||||||||||||| |||||||||||      
T  34868282 cacagatgcaatgtctacaacgtacccagcactgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgca 34868381  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || || ||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  34868382 tacctgcctgccctcagccttggctccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 34868481  T
Q  211 ccca 214  Q
    ||||    
T  34868482 ccca 34868485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 34 - 214
Target Start/End: Complemental strand, 21696761 - 21696580
Alignment:
Q  34 acccagcactgaaatgcccagca-taacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatg 132  Q
    ||||||||||||||||||||||| | ||| | ||| ||||||| | | ||||| ||||||||||||||||||||||  ||||||||||||||||||||||    
T  21696761 acccagcactgaaatgcccagcaatgacggcattatccccagtagagccttccgagattctatccccagcaagttgcatagctacctgccctcagccatg 21696662  T
Q  133 gttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||    
T  21696661 gttccgatacgtctcccaacggcgttatctccaaagaggatttccaggaatgtgtaatattgcacgagccactacgtgccca 21696580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 37679492 - 37679289
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||      
T  37679492 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgca 37679393  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||| | |  ||||||||||| |||||||||||||||||||    
T  37679392 tatctacctgccctcagctatggttccgatacgtctcccaacgacgtcatctccatagaggatctccgagaatgtgtaatatagcacgagccactacgtg 37679293  T
Q  211 ccca 214  Q
    ||||    
T  37679292 ccca 37679289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 37694757 - 37694554
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||      
T  37694757 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgca 37694658  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||| | |  ||||||||||| |||||||||||||||||||    
T  37694657 tatctacctgccctcagctatggttccgatacgtctcccaacgacgtcatctccatagaggatctccgagaatgtgtaatatagcacgagccactacgtg 37694558  T
Q  211 ccca 214  Q
    ||||    
T  37694557 ccca 37694554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 37945459 - 37945256
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||| ||||||||||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||      
T  37945459 cacagatgcaatgtctacaacatacccaacactgaaatgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgca 37945360  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| || |||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  37945359 tatctacctgccctcagctatggttccgacacatctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 37945260  T
Q  211 ccca 214  Q
    ||||    
T  37945259 ccca 37945256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 27397005 - 27397186
Alignment:
Q  34 acccagcactgaaatgcccagc-ataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatg 132  Q
    ||||| |||||||||||||||| || ||| | ||| ||||||  | ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||    
T  27397005 acccaacactgaaatgcccagcgatgacggcattatccccagcggagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatg 27397104  T
Q  133 gttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||| || |||||||||||||||||||||||    
T  27397105 gttccgatacgtctcccaacgacgttatctccaaagaggatttccaagaatgtgtgatatagcacgagccactacgtgccca 27397186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 69 - 214
Target Start/End: Complemental strand, 34268459 - 34268314
Alignment:
Q  69 ccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaag 168  Q
    ||||||| | ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34268459 ccccagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaag 34268360  T
Q  169 aggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||| |||||||||||||  |||||||||||||||||||||||    
T  34268359 aggatttccaggaatgtgtaacatagcacgagccactacgtgccca 34268314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 22921738 - 22921535
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| ||||  ||||||| | | ||  |||||||||||| |||||||||||      
T  22921738 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcgttttccccagtggagcctctcaagattctatctccagcaagttgca 22921639  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  22921638 tatctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 22921539  T
Q  211 ccca 214  Q
    ||||    
T  22921538 ccca 22921535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 23117481 - 23117625
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  23117481 cccagtagagtctcccaagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgcctcccaacgacgtcatctccaaaga 23117580  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  23117581 ggatttccaggaatgtgtaatatagcacgagccactacgtgccca 23117625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 12593462 - 12593665
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||      
T  12593462 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgca 12593561  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||| |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| | |  ||||||||||  |||||||||||||||||||    
T  12593562 tacctaccggccctcggccatggttccgatacgtctcccaacgacgtcatctccatagaggatctccgagaatgtgtaacatagcacgagccactacgtg 12593661  T
Q  211 ccca 214  Q
    ||||    
T  12593662 ccca 12593665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 39045477 - 39045273
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaa-gttga 109  Q
    ||||||||| || ||||| || || ||||||||| ||||||||||| |||| | ||  |||||||| ||||||||||||||||||| ||||||| ||||     
T  39045477 cacagatgcaatgtctacaacatatccagcactggaatgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaaagttgc 39045378  T
Q  110 ttagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgt 209  Q
     || ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||  ||||||||||||||||||    
T  39045377 atatctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaacatagcacgagccactacgt 39045278  T
Q  210 gccca 214  Q
    |||||    
T  39045277 gccca 39045273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 70 - 212
Target Start/End: Original strand, 20844600 - 20844742
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20844600 cccagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaaga 20844699  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgcc 212  Q
     ||||| |||||||||||||| |||||||||||| ||||||||    
T  20844700 tgatttccaggaatgtgtaatatagcacgagccattacgtgcc 20844742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 28888939 - 28889083
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || ||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  28888939 cccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgtcatctccaaaga 28889038  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||||||| ||||||    
T  28889039 ggatttccaggaatgtgtaatatagcacgagccactacatgccca 28889083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 27428000 - 27427864
Alignment:
Q  79 gtcttccaagattctatccccagcaagttg-attagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttac 177  Q
    ||||||| ||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |    
T  27428000 gtcttccgagattctgtccccagcaagttgcataagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaggaggatttcc 27427901  T
Q  178 aggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  27427900 aggaatgtgtaatatagcacgagccattacgtgccca 27427864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 31882987 - 31883122
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    |||||||||||||||||| |||||||||||  || |||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||| ||    
T  31882987 gtcttccaagattctatctccagcaagttgcatacctacctgccctcagccttggttctgatacgtctcccaacgacgtcatctccaaagaggatttcca 31883086  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     ||||||||||| |||||||||||||||||||||||    
T  31883087 agaatgtgtaatatagcacgagccactacgtgccca 31883122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 27782874 - 27783074
Alignment:
Q  14 agatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattag 113  Q
    |||||| || ||||| || ||||||| |||||||||||||||| |||| ||||   |||||| | ||||  |||||||||||||||||||||||   ||     
T  27782874 agatgcaatgtctacaacatacccagtactgaaatgcccagcacaacggcgtttttcccagtggagtctctcaagattctatccccagcaagttacatac 27782973  T
Q  114 ctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccc 213  Q
    ||||| |||||| |||||||||||||||||||| |||||||| | ||||||| ||||||||| || ||||||||||| ||||||||||||||||||||||    
T  27782974 ctaccggccctcggccatggttccgatacgtctaccaacgacatcatctccatagaggatttccaagaatgtgtaatatagcacgagccactacgtgccc 27783073  T
Q  214 a 214  Q
    |    
T  27783074 a 27783074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 37384371 - 37384506
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    ||||||| ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| || || ||    
T  37384371 gtcttccgagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccacagaagaattcca 37384470  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     ||||||||||| |||||||||||||||||||||||    
T  37384471 agaatgtgtaatatagcacgagccactacgtgccca 37384506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 12662175 - 12662320
Alignment:
Q  70 cccagtcgggtcttccaagattctatcccca-gcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaag 168  Q
    |||||| | ||||||| ||||||||||| || ||||||||  || ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  12662175 cccagtagagtcttccgagattctatcctcaagcaagttgcatacctacctgccctcagccatggtcccgatacgtctcccaacgacgtcatctccaaag 12662274  T
Q  169 aggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||| |||||||||||||| |||||||||||||| ||||||||    
T  12662275 aggatttccaggaatgtgtaatatagcacgagccactgcgtgccca 12662320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 214
Target Start/End: Complemental strand, 12710144 - 12710015
Alignment:
Q  85 caagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatg 184  Q
    |||||||||||||||||||||| |  || |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||    
T  12710144 caagattctatccccagcaagtggcatacctacctgccctcagccatggttccaatacgtctcccaacgacgtcatctccaaagaggatttccaagaatg 12710045  T
Q  185 tgtaatctagcacgagccactacgtgccca 214  Q
    |||||| ||||||| |||||||||||||||    
T  12710044 tgtaatatagcacgggccactacgtgccca 12710015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 19449939 - 19449803
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgatta-gctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttac 177  Q
    ||||||| ||||||||||||||||||||||  || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  19449939 gtcttccgagattctatccccagcaagttgcatatgctacccgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttct 19449840  T
Q  178 aggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    | |||||||| || |||| ||||||||||||||||||    
T  19449839 aagaatgtgtgatatagcgcgagccactacgtgccca 19449803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 27123216 - 27123351
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    |||| |||||||||||||||||||||||||  |||||||| ||||||||||  ||| |||| ||||||||||||||||| ||||||||||||||||| ||    
T  27123216 gtctcccaagattctatccccagcaagttgcatagctaccggccctcagcctaggtcccgaaacgtctcccaacgacgtcatctccaaagaggatttcca 27123315  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     ||||||||||| |||||||||||||||||||||||    
T  27123316 agaatgtgtaatatagcacgagccactacgtgccca 27123351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 31868344 - 31868200
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| |||||||||||||| ||||||   || ||||| ||||||||||  ||| |||||||||||||||||||||| |||||||||||    
T  31868344 cccagtagagtcttccgagattctatccccatcaagtttcatacctaccggccctcagcctaggtcccgatacgtctcccaacgacgtcatctccaaaga 31868245  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  31868244 ggatttccaggaatgtgtaatatagcacgagccactacgtgccca 31868200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 40240171 - 40240374
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || ||||||||| |||||||||||||| |||| ||||  |||| || | || |  ||||| |||||||||||||||||       
T  40240171 cacagatgcaatgtctacaacatacccagcattgaaatgcccagcacaacggcgttttccccggtggagtgtctcaagactctatccccagcaagttaca 40240270  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||| |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| | |  ||||||||||  |||||||||||||||||||    
T  40240271 tacctaccggccctcggccatggttccgatacgtctcccaacgacgtcatctccatagaggatctccgagaatgtgtaacatagcacgagccactacgtg 40240370  T
Q  211 ccca 214  Q
    ||||    
T  40240371 ccca 40240374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 85 - 214
Target Start/End: Original strand, 34161563 - 34161692
Alignment:
Q  85 caagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatg 184  Q
    ||||||||||||||||||||||||  || ||||| |||||||||| ||| || |||||||||||||||||||| ||||||||||||||||| || |||||    
T  34161563 caagattctatccccagcaagttgcatacctaccagccctcagccttggctctgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatg 34161662  T
Q  185 tgtaatctagcacgagccactacgtgccca 214  Q
    |||||  |||||||||||||||||||||||    
T  34161663 tgtaacatagcacgagccactacgtgccca 34161692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 4e-71; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 15752364 - 15752161
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||| ||||||||||||||| |||| ||||  ||||||||||||||||||||||||||||||||||||| ||      
T  15752364 cacagatgcaatgtctacaacatacccagcgctgaaatgcccagcacaacggcgttttccccagtcgggtcttccaagattctatccccagcaagatgca 15752265  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||| |||||||||||||||||||    
T  15752264 tagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatccccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 15752165  T
Q  211 ccca 214  Q
    ||||    
T  15752164 ccca 15752161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 30036081 - 30036284
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||| ||||||||||||||| |||| ||||  ||||||||||||||||||||||||||||||||||||| ||      
T  30036081 cacagatgcaatgtctacaacatacccagcgctgaaatgcccagcacaacggcgttttccccagtcgggtcttccaagattctatccccagcaagatgca 30036180  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||| |||||||||||||||||||    
T  30036181 tagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatccccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 30036280  T
Q  211 ccca 214  Q
    ||||    
T  30036281 ccca 30036284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 33523039 - 33523242
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||| ||||||||||||||| |||| ||||  |||| |||||||||||||||||||||||||||||||| ||      
T  33523039 cacagatgcaatgtctacaacatacccagcgctgaaatgcccagcacaacggcgttttccccggtcgggtcttccaagattctatccccagcaagatgca 33523138  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  33523139 tagctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 33523238  T
Q  211 ccca 214  Q
    ||||    
T  33523239 ccca 33523242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 37761629 - 37761832
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| ||||  |||||||   |||||||||||||||||| |||||||||||      
T  37761629 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgca 37761728  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
     |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| || ||||||||||| |||||||||||||||||||    
T  37761729 cagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatcttcaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 37761828  T
Q  211 ccca 214  Q
    ||||    
T  37761829 ccca 37761832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 40467055 - 40466852
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||      
T  40467055 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgca 40466956  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  40466955 tatctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 40466856  T
Q  211 ccca 214  Q
    ||||    
T  40466855 ccca 40466852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 13318332 - 13318129
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||  |||||||   |||||||||||||||||| |||||||||||      
T  13318332 cacagatgcgatatctacaacgtacccagcactgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgca 13318233  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || || |||||||||||||  ||| |||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  13318232 tacctgcctgccctcagcctaggtcccgaaacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 13318133  T
Q  211 ccca 214  Q
    ||||    
T  13318132 ccca 13318129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 32589781 - 32589578
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||| ||||||||||||||| |||| ||||  |||||||| ||||| ||||||||||||| |||||||||||      
T  32589781 cacagatgcaatgtctacaacatacccagcgctgaaatgcccagcacaacggcgttctccccagtcaggtctcccaagattctatctccagcaagttgta 32589682  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| ||||||||||||||||| ||| ||||||||||||| || ||||||||||| |||||||||||||||||||    
T  32589681 tatctacctgccctcagctatggttccgacacgtctcccaacgacgtcatccccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 32589582  T
Q  211 ccca 214  Q
    ||||    
T  32589581 ccca 32589578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 69 - 214
Target Start/End: Original strand, 22895120 - 22895265
Alignment:
Q  69 ccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaag 168  Q
    ||||||| | ||||||| ||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22895120 ccccagtagagtcttccgagattctatccccagcaagttgcatagctatctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaag 22895219  T
Q  169 aggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||    
T  22895220 aggatttccaggaatgtgtaatatagcacgagccactacgtgccca 22895265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 3796188 - 3796391
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||  || ||||| || |||||||||||||||||||||||| |||| ||||  |||||||   |||||||||||||||||| |||||||||||      
T  3796188 cacagatgaaatgtctacaacatacccagcactgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgca 3796287  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || || ||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  3796288 tacctgcctgccctcagccttggctccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 3796387  T
Q  211 ccca 214  Q
    ||||    
T  3796388 ccca 3796391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 6880984 - 6881151
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtct 146  Q
    |||||||||| |||| |||||  |||||| | ||||||| ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||    
T  6880984 atgcccagcacaacggcgttattcccagtagagtcttccgagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtct 6881083  T
Q  147 cccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  6881084 cccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgccca 6881151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 47 - 214
Target Start/End: Complemental strand, 31819891 - 31819724
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtct 146  Q
    |||||||||| |||| ||||  |||||||||||||||||||||||||||| |||||||||||  || |||||||||||||||||||||||||||||||||    
T  31819891 atgcccagcacaacggcgttttccccagtcgggtcttccaagattctatctccagcaagttgcatacctacctgccctcagccatggttccgatacgtct 31819792  T
Q  147 cccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||| ||||||||||||||||| || ||||||||||| ||||| ||||||||| |||||||    
T  31819791 cccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcatgagccactatgtgccca 31819724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 23898552 - 23898734
Alignment:
Q  34 acccagcactgaaatgcccagca-taacgacgttacccccagtcgggtcttccaagattctatcccca-gcaagttgattagctacctgccctcagccat 131  Q
    |||| |||||||||||||| ||| | ||| | ||| ||||||| | ||||||| |||||||||||||| ||||||||  |||||||||||||||||||||    
T  23898552 acccggcactgaaatgcccggcaatgacggcattatccccagtagagtcttccgagattctatccccaagcaagttgcatagctacctgccctcagccat 23898651  T
Q  132 ggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  23898652 ggttccgatacgtctcccaacgacgttatctccaaagaggatttccaggaatgtgtaatatagcacgagccattacgtgccca 23898734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 11330289 - 11330492
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| | ||  |||||||| |||||  ||||| |||||||||||||||||       
T  11330289 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcattttccccagtcaggtctctcaagactctatccccagcaagttaca 11330388  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||| |||||||    
T  11330389 tacctaccggccctcggccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccgctacgtg 11330488  T
Q  211 ccca 214  Q
    ||||    
T  11330489 ccca 11330492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 18494274 - 18494071
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || ||||||||| |||||||| ||||| |||| ||||  |||| || | |||| |||||||||||||||||||||||||      
T  18494274 cacagatgcaatgtctacaacatacccagcattgaaatgctcagcacaacggcgttttccccggtagagtctcccaagattctatccccagcaagttgca 18494175  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||  ||||||||||||||| |||    
T  18494174 tagctactggccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaacatagcacgagccactatgtg 18494075  T
Q  211 ccca 214  Q
    ||||    
T  18494074 ccca 18494071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 30175123 - 30175326
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| ||||  ||||||| | | ||  |||||||||||| |||||||||||      
T  30175123 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcgttttccccagtggagcctctcaagattctatctccagcaagttgca 30175222  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||||    
T  30175223 tatctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaagatttccaagaatgtgtaatatagcacgagccactacgtg 30175322  T
Q  211 ccca 214  Q
    ||||    
T  30175323 ccca 30175326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 24976538 - 24976682
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24976538 cccagtagagtcttccgagattctatccccagcaagttgcataactacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaaga 24976637  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  24976638 ggatttccaggaatgtgtaatatagcacgagccactgcgtgccca 24976682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 5644455 - 5644658
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| ||||||||||| ||||||||||||||| |||| ||||  ||||||| | | ||  ||||||||| ||  ||||||||||      
T  5644455 cacagatgcaatgtctacaacgtacccagcgctgaaatgcccagcacaacggcgttttccccagtggagcctctcaagattctgtctacagcaagttgca 5644554  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  5644555 tatctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 5644654  T
Q  211 ccca 214  Q
    ||||    
T  5644655 ccca 5644658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 28655900 - 28656103
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||| |||| ||||  |||| || | ||||  ||||||||||||||||||||| ||      
T  28655900 cacagatgcaatgtctacaacgtacccagcactgaaatgcccagcacaacggcgttttccccggtggagtctctcaagattctatccccagcaaggtgca 28655999  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || |||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||| ||||| || ||||||||||  |||||||||||||||||||    
T  28656000 tacctacctgccctcagccttgactccgatacgtctcccaacgacgtcatctccaaagaagatttccaagaatgtgtaacatagcacgagccactacgtg 28656099  T
Q  211 ccca 214  Q
    ||||    
T  28656100 ccca 28656103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 87 - 214
Target Start/End: Complemental strand, 37352094 - 37351967
Alignment:
Q  87 agattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtg 186  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||    
T  37352094 agattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtg 37351995  T
Q  187 taatctagcacgagccactacgtgccca 214  Q
    |||| |||||||||||||||||||||||    
T  37351994 taatatagcacgagccactacgtgccca 37351967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 25206966 - 25207147
Alignment:
Q  34 acccagcactgaaatgcccagca-taacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatg 132  Q
    |||| ||| |||||||||| ||| | ||||| ||| || |||| | ||||||| ||||||||||||||||||||||  ||||||||||||||||||| ||    
T  25206966 acccggcattgaaatgcccggcagtgacgacattatcctcagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccctg 25207065  T
Q  133 gttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||| |||||||||||| ||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||    
T  25207066 gttctgatacgtctcccgacgacgttatctccaaagaggattcccaggaatgtgtaatgtagcacgagccactacgtgccca 25207147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 25271122 - 25271303
Alignment:
Q  34 acccagcactgaaatgcccagca-taacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatg 132  Q
    |||| ||| |||||||||| ||| | ||||| ||| || |||| | ||||||| ||||||||||||||||||||||  ||||||||||||||||||| ||    
T  25271122 acccggcattgaaatgcccggcagtgacgacattatcctcagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccctg 25271221  T
Q  133 gttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||| |||||||||||| ||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||    
T  25271222 gttctgatacgtctcccgacgacgttatctccaaagaggattcccaggaatgtgtaatgtagcacgagccactacgtgccca 25271303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 9324154 - 9324322
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatcccca-gcaagttgattagctacctgccctcagccatggttccgatacgtc 145  Q
    |||||||||| |||| ||||  |||| || | ||||  |||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||    
T  9324154 atgcccagcacaacggcgttttccccggtggagtctctcaagattctatccccaagcaagttgtttagttacctgccctcagccatggttccgatacgtc 9324253  T
Q  146 tcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  9324254 tcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgccca 9324322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 9544175 - 9544031
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| |||||||||||||||| |||||  || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9544175 cccagtagagtcttccgagattctatccccagcgagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaaga 9544076  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  9544075 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 9544031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 22992588 - 22992444
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  22992588 cccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgacacgtctcccaacgacgtcatctccaaaga 22992489  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  22992488 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 22992444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 23726931 - 23727075
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || ||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  23726931 cccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgtcatctccaaaga 23727030  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  23727031 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 23727075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 24608939 - 24609083
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  24608939 cccagtagagtcttccgagattctatccccagcaagttgcataactacctgccctcagccatggttccgatacgtctctcaacgacgtcatctccaaaga 24609038  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||| ||||||||||    
T  24609039 ggatttccaggaatgtgtaatatagcacgagccattacgtgccca 24609083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 26487064 - 26487232
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatcccca-gcaagttgattagctacctgccctcagccatggttccgatacgtc 145  Q
    |||||||||| |||| ||||  |||| || | ||||  |||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||    
T  26487064 atgcccagcacaacggcgttttccccggtggagtctctcaagattctatccccaagcaagttgtttagttacctgccctcagccatggttccgatacgtc 26487163  T
Q  146 tcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  26487164 tcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgccca 26487232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 33881797 - 33881964
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtct 146  Q
    |||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||  || ||||||||||||||||  ||| |||||||||||    
T  33881797 atgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagcctaggtcccgatacgtct 33881896  T
Q  147 cccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  33881897 cccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgccca 33881964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 214
Target Start/End: Complemental strand, 37745781 - 37745652
Alignment:
Q  85 caagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatg 184  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| |    
T  37745781 caagattctatccccagcgagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaagg 37745682  T
Q  185 tgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||||||||||||    
T  37745681 tgtaatatagcacgagccactacgtgccca 37745652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 8658931 - 8658796
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    ||||||| |||||||||  |||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||    
T  8658931 gtcttccgagattctatttccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccagcgacgtcatctccaaagaggatttcca 8658832  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     ||||||||||| |||||||||||||||||||||||    
T  8658831 agaatgtgtaatatagcacgagccactacgtgccca 8658796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 12138853 - 12139020
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtct 146  Q
    |||||||||| |||| ||||  |||||||   |||||||||||||||||| |||||||||||  || || ||||||||||||| ||| ||||||||||||    
T  12138853 atgcccagcacaacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgcatacctgcctgccctcagccttggctccgatacgtct 12138952  T
Q  147 cccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  12138953 cccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgccca 12139020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 13436175 - 13435972
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||| | ||||||||||||||| |||| ||||  |||| || | ||||  ||||||||||||||||||||||||      
T  13436175 cacagatgcaatgtctacaacatacccaacgctgaaatgcccagcacaacggcgttttccccggtggagtctctcaagattctatccccagcaagttgca 13436076  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||| |||||||||| ||| || |||||||||||||| ||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  13436075 tacctaccagccctcagccttggctctgatacgtctcccaatgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 13435976  T
Q  211 ccca 214  Q
    ||||    
T  13435975 ccca 13435972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 47 - 214
Target Start/End: Complemental strand, 28953265 - 28953098
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtct 146  Q
    |||||||||| |||| ||||  |||||||   ||||||| ||||||| ||||||||||| ||  |||||||||||||||||||||||| |||||||||||    
T  28953265 atgcccagcacaacggcgttttccccagtaaagtcttccgagattctgtccccagcaagatgcatagctacctgccctcagccatggtcccgatacgtct 28953166  T
Q  147 cccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||| ||||||||||||||||| || |||| |||||| |||||||||||||||||||||||    
T  28953165 cccaacgacgtcatctccaaagaggattttcaagaatatgtaatatagcacgagccactacgtgccca 28953098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 85 - 214
Target Start/End: Original strand, 31438166 - 31438295
Alignment:
Q  85 caagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatg 184  Q
    ||||||||||||||||||||||||  ||  ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||    
T  31438166 caagattctatccccagcaagttgcatacttacctgccctcagccatggttccaatacgtctcccaacgacgtcatctccaaagaggatttccaagaatg 31438265  T
Q  185 tgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||||||||||||    
T  31438266 tgtaatatagcacgagccactacgtgccca 31438295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 18121881 - 18121737
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  18121881 cccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccttggttccgacacgtctcccaacgacgtcatctccaaaga 18121782  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||| || || |||||||||||||||||||||||    
T  18121781 ggatttccaggaatgcgtgatatagcacgagccactacgtgccca 18121737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 23632664 - 23632808
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  23632664 cccagtagagtcttccgagattctatccccagcaagttgcatagctatctgccctcagccatggtcccgatacgtctcccaacgacgtcatctccaaaga 23632763  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||  ||||||||    
T  23632764 ggatttccaagaatgtgtaatatagcacgagccaccgcgtgccca 23632808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 30158711 - 30158878
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtct 146  Q
    |||||||||| |||| | ||  ||||||||  |||||||||||||||||| |||||||||||  || ||||||  |||||||| |||||| |||||||||    
T  30158711 atgcccagcacaacggcattttccccagtcaagtcttccaagattctatctccagcaagttgcatacctacctatcctcagccttggttctgatacgtct 30158810  T
Q  147 cccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  30158811 cccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgccca 30158878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 34623190 - 34623357
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtct 146  Q
    |||||||||| |||| ||||  |||| || | ||||  ||||||||||||||||||||||||  || |||||||||| ||||| ||| ||||||||||||    
T  34623190 atgcccagcacaacggcgttttccccggtggagtctctcaagattctatccccagcaagttgcatacctacctgcccccagccttggctccgatacgtct 34623289  T
Q  147 cccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  34623290 cccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgccca 34623357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 93 - 214
Target Start/End: Complemental strand, 13180241 - 13180120
Alignment:
Q  93 tatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatct 192  Q
    |||||||||| |||||  || ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |    
T  13180241 tatccccagcgagttgcatacctacctgccctcagccatggtcccgatacgtctcccaacgacgtcatctccaaagaggatttccaggaatgtgtaatat 13180142  T
Q  193 agcacgagccactacgtgccca 214  Q
    ||||||||||||||||||||||    
T  13180141 agcacgagccactacgtgccca 13180120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 214
Target Start/End: Original strand, 24730678 - 24730807
Alignment:
Q  85 caagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatg 184  Q
    |||||||||||||||||||||| |  || |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||    
T  24730678 caagattctatccccagcaagtggcatacctacctgccctcagccatggttccaatacgtctcccaacgacgtcatctccaaagaggatttccaagaatg 24730777  T
Q  185 tgtaatctagcacgagccactacgtgccca 214  Q
    |||||| ||||||| |||||||||||||||    
T  24730778 tgtaatatagcacgggccactacgtgccca 24730807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 11556048 - 11556192
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| |||||| ||||||||||||||||||  |||||||| ||||||||||  ||| |||||||||||||||||||||| |||||||||||    
T  11556048 cccagtagagtctcccaagactctatccccagcaagttgcatagctaccggccctcagcctaggtcccgatacgtctcccaacgacgtcatctccaaaga 11556147  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||    
T  11556148 ggatttccaggaatgcgtaatatagcacgagccactacgtgccca 11556192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 15652208 - 15652064
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || ||||||||||||||||||||||  ||||||||||||||||||| ||||| ||| ||||||||||||||| | |||||||||||    
T  15652208 cccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccttggtttcgacacgtctcccaacgacatcatctccaaaga 15652109  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  15652108 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 15652064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 30941324 - 30941468
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || ||||||||||| ||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  30941324 cccagtagagtctcccgagattctatcctcagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgtcatctccaaaga 30941423  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| ||||||||||||||  |||||||    
T  30941424 ggatttccaagaatgtgtaatatagcacgagccactgtgtgccca 30941468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 18369036 - 18368833
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || || ||||||||||||||||||||| |||| ||||  ||||||| | ||||  ||||  |||||||||||||||||       
T  18369036 cacagatgcaatgtctacaacatatccagcactgaaatgcccagcacaacggcgttttccccagtggagtctctcaaggctctatccccagcaagttaca 18368937  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||| |||||| ||||||||||||||||||||||||||||||| ||||||| |||| || | |  ||||||||||| |||||||||||||||||||    
T  18368936 tacctaccggccctcggccatggttccgatacgtctcccaacgacgtcatctccatagagaatctccgagaatgtgtaatatagcacgagccactacgtg 18368837  T
Q  211 ccca 214  Q
    ||||    
T  18368836 ccca 18368833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 41681408 - 41681545
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagagga--ttta 176  Q
    ||||||| ||||||||||||||||||||||  ||| ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||  |||     
T  41681408 gtcttccgagattctatccccagcaagttgcatagttacctgccctcagtcatggttccgacacgtctcccaacgacgtcatctccaaagaggatttttc 41681507  T
Q  177 caggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    || ||||||||||| |||||||||||||||||||||||    
T  41681508 caagaatgtgtaatatagcacgagccactacgtgccca 41681545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 33299249 - 33299374
Alignment:
Q  89 attctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgta 188  Q
    ||||||||||||||||||||  |||||||| |||||| |||  ||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  33299249 attctatccccagcaagttgcatagctaccggccctccgcctaggtcccgatacgtctcccaacgacgtcatctccaaagaggatttccaggaatgtgta 33299348  T
Q  189 atctagcacgagccactacgtgccca 214  Q
    || |||||||||||||||||||||||    
T  33299349 atatagcacgagccactacgtgccca 33299374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 2517768 - 2517903
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    ||||| |||||||||||| |||||||||||  || || ||||||||||||| ||| |||| |||||||||||||||||| ||||||||||||||||| ||    
T  2517768 gtctttcaagattctatctccagcaagttgcatacctgcctgccctcagccgtggctccggtacgtctcccaacgacgtcatctccaaagaggatttcca 2517867  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     ||||||||||| |||||||||||||||||||||||    
T  2517868 agaatgtgtaatatagcacgagccactacgtgccca 2517903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 33784176 - 33784320
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || ||||||||||||||||||||||  |||||||| ||||||| |   ||| |||||||||||||||||||||| |||||||||||    
T  33784176 cccagtagagtctcccgagattctatccccagcaagttgcatagctaccggccctcaacttaggtcccgatacgtctcccaacgacgtcatctccaaaga 33784275  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||    
T  33784276 ggatttccaggaatgcgtaatatagcacgagccactacgtgccca 33784320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 37664942 - 37664807
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    ||||| |||||||||||| |||||||||||  || || ||  ||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| ||    
T  37664942 gtctttcaagattctatctccagcaagttgcatacctgcccaccctcagccttggttccgaaacgtctcccaacgacgtcatctccaaagaggatttcca 37664843  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     ||||||||||| |||||||||||||||||||||||    
T  37664842 agaatgtgtaatatagcacgagccactacgtgccca 37664807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 43084909 - 43085073
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| ||||  |||| || | ||||  ||||| |||||||||||||||||       
T  43084909 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcgttttccccggtggagtctctcaagactctatccccagcaagttaca 43085008  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggattt 175  Q
    || ||||| |||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  43085009 tacctaccggccctcggccatggttccgatacgtctcccaacgacgtcatctccagagaggattt 43085073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 4e-71; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 54840050 - 54840253
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||| ||||||||||||||| |||| ||||  |||||||||||||||||||||||||||| |||||||||||      
T  54840050 cacagatgcaatgtctacaacatacccagcgctgaaatgcccagcacaacggcgttttccccagtcgggtcttccaagattctatctccagcaagttgca 54840149  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  54840150 tacctacctgccctcagccatggttccgaaacgtctcccaacgacgtcatctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtg 54840249  T
Q  211 ccca 214  Q
    ||||    
T  54840250 ccca 54840253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 21976363 - 21976566
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||| ||||||||||||||| |||| ||||  |||| |||||||||||||||||||||||||||||||| ||      
T  21976363 cacagatgcaatgtctacaacatacccagcgctgaaatgcccagcacaacggcgttttccccggtcgggtcttccaagattctatccccagcaagatgca 21976462  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  21976463 tagctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 21976562  T
Q  211 ccca 214  Q
    ||||    
T  21976563 ccca 21976566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 11 - 213
Target Start/End: Original strand, 5012540 - 5012742
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||||||||||||||| |||||||| |||| |||||||||| || |  |||| ||||||||||||||  ||||||||||||||||||||||||      
T  5012540 cacagatgcgatatctacgacatacccagcgctgacatgcccagcacaatggtgttatccccagtcgggtctctcaagattctatccccagcaagttgca 5012639  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  5012640 tacctacctgccctcagccgtggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 5012739  T
Q  211 ccc 213  Q
    |||    
T  5012740 ccc 5012742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 20332041 - 20331838
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||      
T  20332041 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgca 20331942  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  20331941 tatctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 20331842  T
Q  211 ccca 214  Q
    ||||    
T  20331841 ccca 20331838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 31120116 - 31119913
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || | ||| || |||||||| ||||||||||||||| |||| ||||  |||| |||||||||||||||||||||||||||||||| ||      
T  31120116 cacagatgcaatgtttacaacatacccagcgctgaaatgcccagcacaacggcgttttccccggtcgggtcttccaagattctatccccagcaagatgca 31120017  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  31120016 tagctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 31119917  T
Q  211 ccca 214  Q
    ||||    
T  31119916 ccca 31119913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 33667407 - 33667204
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||| |||| ||||  |||||||   |||||||||||||||||| |||||||||||      
T  33667407 cacagatgcaatgtctacaacgtacccagcactgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgca 33667308  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || || ||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  33667307 tacctgcctgccctcagccttggctccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 33667208  T
Q  211 ccca 214  Q
    ||||    
T  33667207 ccca 33667204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 1906949 - 1907130
Alignment:
Q  34 acccagcactgaaatgcccagca-taacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatg 132  Q
    ||||||||||||||||||||||| | ||| | ||| ||||||| | | ||||| ||||||||||||||||||||||  ||||||||||||||||| ||||    
T  1906949 acccagcactgaaatgcccagcaatgacggcattatccccagtagagccttccgagattctatccccagcaagttgcatagctacctgccctcagtcatg 1907048  T
Q  133 gttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  1907049 gttccgatacgtctcccaatgacgttatctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgccca 1907130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 15234500 - 15234681
Alignment:
Q  34 acccagcactgaaatgcccagc-ataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatg 132  Q
    |||||||||| ||||||||||| || ||| | ||| ||||||  | ||||||| ||||||||||||||||||||||  ||||||||||||||||| ||||    
T  15234500 acccagcactaaaatgcccagcgatgacggcattatccccagcagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagtcatg 15234599  T
Q  133 gttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  15234600 gttccgatacgtctcccaacgacgttatctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgccca 15234681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 24585978 - 24585774
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagca-taacgacgttacccccagtcgggtcttccaagattctatccccagcaagttga 109  Q
    |||||||||||||||||| || |||||||||||||||||||| ||| | ||| | |||  |||||| | |||| || ||||||||||||||||||||||     
T  24585978 cacagatgcgatatctacaacatacccagcactgaaatgcccggcaatgacggcattattcccagtagagtctcccgagattctatccccagcaagttgc 24585879  T
Q  110 ttagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgt 209  Q
     |||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||||    
T  24585878 atagctatctgccctcagccatggtcccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgt 24585779  T
Q  210 gccca 214  Q
    |||||    
T  24585778 gccca 24585774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 30760423 - 30760626
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||| |||| ||||  |||||||   |||||||||||||||||| |||||||||||      
T  30760423 cacagatgcaatgtctacaacgtacccagcactgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgca 30760522  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || || ||||||||||||| ||| ||||||||||||||||||||||| ||||||||| ||||||| || ||||||||||| |||||||||||||||||||    
T  30760523 tacctgcctgccctcagccttggctccgatacgtctcccaacgacgtcatctccaaaaaggatttccaagaatgtgtaatatagcacgagccactacgtg 30760622  T
Q  211 ccca 214  Q
    ||||    
T  30760623 ccca 30760626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 40099239 - 40099036
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| ||||  ||||||| | | ||  |||||||||||| |||||||||||      
T  40099239 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcgttttccccagtggagcctctcaagattctatctccagcaagttgca 40099140  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  40099139 tatctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 40099040  T
Q  211 ccca 214  Q
    ||||    
T  40099039 ccca 40099036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 14753063 - 14752919
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14753063 cccagtagagtcttccgagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaaga 14752964  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  14752963 ggatttccaggaatgtgtaatatagcacgagccactacgtgccca 14752919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 14671717 - 14671852
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  14671717 gtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttcca 14671816  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||||| |||||||||||| ||||||||||    
T  14671817 ggaatgtgtaatatagcacgagccattacgtgccca 14671852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 17019747 - 17019891
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17019747 cccagtagagtcttccgagattctatccccagcaagttgcataactacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaaga 17019846  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  17019847 ggatttccaggaatgtgtaatatagcacgagccactgcgtgccca 17019891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 47 - 214
Target Start/End: Complemental strand, 27156896 - 27156729
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtct 146  Q
    |||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||  || ||||||||||||||| |||||||||| ||||||    
T  27156896 atgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtct 27156797  T
Q  147 cccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  27156796 cccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgccca 27156729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 15379776 - 15379641
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||    
T  15379776 gtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgttatatccaaagaggatttcca 15379677  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     |||||||| || |||||||||||||||||||||||    
T  15379676 agaatgtgtgatatagcacgagccactacgtgccca 15379641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 36323884 - 36323740
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  |  |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  36323884 cccagtagagtcttccgagattctatccccagcaagttgcatgcctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaagga 36323785  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  36323784 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 36323740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 36338093 - 36337949
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  |  |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  36338093 cccagtagagtcttccgagattctatccccagcaagttgcatgcctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaagga 36337994  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  36337993 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 36337949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 5701256 - 5701391
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    |||||||||||||||||| |||||||||||  || |||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||| ||    
T  5701256 gtcttccaagattctatctccagcaagttgcatacctacctgccctcagccttggttctgatacgtctcccaacgacgtcatctccaaagaggatttcca 5701355  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     ||||||||||| |||||||||||||||||||||||    
T  5701356 agaatgtgtaatatagcacgagccactacgtgccca 5701391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 15276164 - 15276029
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    ||||||| ||||||| |||||||||||| |  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  15276164 gtcttccgagattctgtccccagcaagtcgcatagctacctgccctcagccatggttccgatacgtctcccaacaacgttatctccaaagaggatttcca 15276065  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     |||||||| || |||||||||||||||||||||||    
T  15276064 agaatgtgtgatatagcacgagccactacgtgccca 15276029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 69 - 214
Target Start/End: Original strand, 6576553 - 6576699
Alignment:
Q  69 ccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctcc-aaa 167  Q
    ||||||| | ||||||| ||||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  6576553 ccccagtggagtcttccgagattctatccccagcaagttgcatacttacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaaa 6576652  T
Q  168 gaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||| || ||||||||||| |||||||||||||||||||||||    
T  6576653 gaggatttccaagaatgtgtaatatagcacgagccactacgtgccca 6576699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 14105203 - 14105406
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || || ||||||||||||||||||||| |||| ||||  ||||||| | ||||  ||||| |||||||||||||||||       
T  14105203 cacagatgcaatgtctacaacatatccagcactgaaatgcccagcacaacggcgttttccccagtggagtctctcaagactctatccccagcaagttaca 14105302  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || |||||  ||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| | |  ||||||||||| |||||||||||||||||||    
T  14105303 tacctaccgaccctcggccatggttccgatacgtctcccaacgacgtcatctccatagaggatctccgagaatgtgtaatatagcacgagccactacgtg 14105402  T
Q  211 ccca 214  Q
    ||||    
T  14105403 ccca 14105406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 39857342 - 39857477
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    ||||||| ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| || || ||    
T  39857342 gtcttccgagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccacagaagaattcca 39857441  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     ||||||||||| |||||||||||||||||||||||    
T  39857442 agaatgtgtaatatagcacgagccactacgtgccca 39857477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 214
Target Start/End: Complemental strand, 18794175 - 18794046
Alignment:
Q  85 caagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatg 184  Q
    ||||| |||||||||||||||||   || ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  18794175 caagactctatccccagcaagttacatacctaccggccctcggccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatg 18794076  T
Q  185 tgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||||||||||||    
T  18794075 tgtaatatagcacgagccactacgtgccca 18794046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 34182504 - 34182360
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| |||||| ||||||||||||||||||  |||||||| ||||||||||  ||| |||| ||||||||||||||||| |||||||||||    
T  34182504 cccagtagagtctcccaagactctatccccagcaagttgcatagctaccggccctcagcctaggtcccgacacgtctcccaacgacgtcatctccaaaga 34182405  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| ||||||||||||||| |||||||    
T  34182404 ggatttccaagaatgtgtaatatagcacgagccactatgtgccca 34182360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 24119359 - 24119504
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  || ||||  |||||||||| |||| ||||||||||||||||||| || |||||||||||    
T  24119359 cccagtagagtcttccgagattctatccccagcaagttgcatatctactggccctcagccttggtcccgatacgtctcccaacgatgtcatctccaaaga 24119458  T
Q  170 ggatttacag-gaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| | | ||||||||||| |||||||||||||||||||||||    
T  24119459 ggattttccgagaatgtgtaatatagcacgagccactacgtgccca 24119504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 24814737 - 24814704
Alignment:
Q  181 aatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||| |||||||||||||||||||||||    
T  24814737 aatgtgtaatatagcacgagccactacgtgccca 24814704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 4e-71; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 24334788 - 24334991
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| ||||  ||||||| ||||||||||||||||||||||||||||| ||      
T  24334788 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcgttttccccagtggggtcttccaagattctatccccagcaagatgca 24334887  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||| |||||||||||||||||||    
T  24334888 tagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatccccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 24334987  T
Q  211 ccca 214  Q
    ||||    
T  24334988 ccca 24334991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 6536390 - 6536187
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    |||||||||||| || || |||||||||| |||||||||||||||| |||| ||||  |||||||   |||||||||||||||||| |||||||||||      
T  6536390 cacagatgcgatgtccacaacgtacccagtactgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgca 6536291  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| || ||||||||||| |||||||||||||||||||    
T  6536290 tagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatcttcaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 6536191  T
Q  211 ccca 214  Q
    ||||    
T  6536190 ccca 6536187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 17978598 - 17978395
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||| ||||||||||||||| |||| ||||  |||| |||||||||||||||||||||||||||||||| ||      
T  17978598 cacagatgcaatgtctacaacatacccagcgctgaaatgcccagcacaacggcgttttccccggtcgggtcttccaagattctatccccagcaagatgca 17978499  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  17978498 tagctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 17978399  T
Q  211 ccca 214  Q
    ||||    
T  17978398 ccca 17978395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 18231804 - 18232007
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||| ||||||||||||||| |||| ||||  |||| |||||||||||||||||||||||||||||||| ||      
T  18231804 cacagatgcaatgtctacaacatacccagcgctgaaatgcccagcacaacggcgttttccccggtcgggtcttccaagattctatccccagcaagatgca 18231903  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  18231904 tagctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 18232003  T
Q  211 ccca 214  Q
    ||||    
T  18232004 ccca 18232007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 10649683 - 10649885
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| ||||  |||||||  | |||||||||||||||||||||||||||||      
T  10649683 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcgttttccccagtaag-tcttccaagattctatccccagcaagttgca 10649781  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  10649782 tacctacctgccctcagccatggttccgaaacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 10649881  T
Q  211 ccca 214  Q
    ||||    
T  10649882 ccca 10649885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 51788634 - 51788837
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||| |||| ||||  |||||||   |||||||||||||||||| |||||||||||      
T  51788634 cacagatgcaatgtctacaacgtacccagcactgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgca 51788733  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || || ||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  51788734 tacctgcctgccctcagccttggctccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 51788833  T
Q  211 ccca 214  Q
    ||||    
T  51788834 ccca 51788837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 47 - 214
Target Start/End: Complemental strand, 28109575 - 28109407
Alignment:
Q  47 atgcccagcataacgacgttacccccagtc-gggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtc 145  Q
    |||||||||| |||| ||||  |||||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28109575 atgcccagcacaacggcgttttccccagtcagggttttccaagattctatctccagcaagttgtttagctacctgccctcagccatggttccgatacgtc 28109476  T
Q  146 tcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  28109475 tcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgccca 28109407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 29658614 - 29658411
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||      
T  29658614 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgca 29658515  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||| | ||||||||||||||||| ||||||||||||||||| || ||||||||||  |||||||||||||||||||    
T  29658514 tatctacctgccctcagctatggttccaacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaacatagcacgagccactacgtg 29658415  T
Q  211 ccca 214  Q
    ||||    
T  29658414 ccca 29658411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 47030068 - 47030271
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaa-gttga 109  Q
    ||||||||| || ||||| || |||||||||||||| ||||||||| |||| ||||  ||||||| | |||||||||||||||||| ||||||| ||||     
T  47030068 cacagatgcaatgtctacaacatacccagcactgaa-tgcccagcacaacggcgttttccccagtggagtcttccaagattctatctccagcaaagttgc 47030166  T
Q  110 ttagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgt 209  Q
     |||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||| || ||||||||||| ||||||||||||||||||    
T  47030167 atagctacctgccctcagccatggttccgatgcgtctcccaacgacgtcatcttcaaagaggatttccaagaatgtgtaatatagcacgagccactacgt 47030266  T
Q  210 gccca 214  Q
    |||||    
T  47030267 gccca 47030271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 5602960 - 5602757
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| ||||  ||||||| | | ||  |||||||||||| |||||||||||      
T  5602960 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcgttttccccagtggagcctctcaagattctatctccagcaagttgca 5602861  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  5602860 tatctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 5602761  T
Q  211 ccca 214  Q
    ||||    
T  5602760 ccca 5602757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 15886328 - 15886184
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15886328 cccagtagagtcttccgagattctatccccagcaagatgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 15886229  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||| ||||||||||    
T  15886228 ggatttccaggaatgtgtaatatagcacgagccattacgtgccca 15886184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 18285967 - 18285823
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18285967 cccagtagagtcttccgagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaaga 18285868  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  18285867 ggatttccaggaatgtgtaatatagcacgagccactacgtgccca 18285823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 18301268 - 18301124
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18301268 cccagtagagtcttccgagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaaga 18301169  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  18301168 ggatttccaggaatgtgtaatatagcacgagccactacgtgccca 18301124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 5020323 - 5020526
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || ||||||||  |||||||||||||| |||| ||||  |||||||   ||||  ||||||||||||||||||||||||      
T  5020323 cacagatgcaatgtctacaacatacccagctttgaaatgcccagcacaacggcgttttccccagtaaagtctctcaagattctatccccagcaagttgca 5020422  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |  ||||||||||| |||||||||||||||||||    
T  5020423 tatctacctgccctcagctatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccgagaatgtgtaatatagcacgagccactacgtg 5020522  T
Q  211 ccca 214  Q
    ||||    
T  5020523 ccca 5020526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 5590003 - 5589800
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || || ||||||||||||||||||||  |||| | ||  |||||||| ||||||||||||||||||| | |||||||||      
T  5590003 cacagatgcaatgtctacaacatatccagcactgaaatgcccagcgcaacggcattttccccagtcaggtcttccaagattctatctctagcaagttgca 5589904  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||| |||||||||    
T  5589903 tacctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagtcactacgtg 5589804  T
Q  211 ccca 214  Q
    ||||    
T  5589803 ccca 5589800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 16404439 - 16404236
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| |||||||||||||||| |||||||||| |||| ||||  |||| ||  |||||  ||||||||||||||||||||||||      
T  16404439 cacagatgcaatgtctacaacgtacccagcactgagatgcccagcacaacggcgttttccccggtgaggtctctcaagattctatccccagcaagttgca 16404340  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || |||||||||||||||| ||| ||||||||||| ||||||||||| ||||||| ||||||||| || ||||||||||| |||||||||||||||||||    
T  16404339 tacctacctgccctcagccttggctccgatacgtcccccaacgacgtcatctccatagaggatttccaagaatgtgtaatatagcacgagccactacgtg 16404240  T
Q  211 ccca 214  Q
    ||||    
T  16404239 ccca 16404236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 28345783 - 28345986
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| ||||  ||||||| | | ||  |||||||||||| |||||||||||      
T  28345783 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcgttttccccagtggagcctctcaagattctatctccagcaagttgca 28345882  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||| ||||||| |||||||||||||||||||    
T  28345883 tatctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaaggtgtaatatagcacgagccactacgtg 28345982  T
Q  211 ccca 214  Q
    ||||    
T  28345983 ccca 28345986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 69 - 214
Target Start/End: Original strand, 16422855 - 16423000
Alignment:
Q  69 ccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaag 168  Q
    ||||||| | ||||||| ||||||||||||| ||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16422855 ccccagtagagtcttccgagattctatcccctgcaagttgcataactacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaag 16422954  T
Q  169 aggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||| |||||||||||||| |||||||||||||||||| ||||    
T  16422955 aggatttccaggaatgtgtaatatagcacgagccactacgtaccca 16423000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 4728275 - 4728419
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  4728275 cccagtagagtctcccaagattctatccccagcaagttgcatagctacctgccctcagccatggttccgacacgtctcccaacgacgtcatctccaaaga 4728374  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  4728375 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 4728419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 5658783 - 5658927
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5658783 cccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaaga 5658882  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||| ||||||| |||||||||||||||||||||||    
T  5658883 ggatttccaggaaggtgtaatatagcacgagccactacgtgccca 5658927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 6208544 - 6208688
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  6208544 cccagtagagtctcccaagattctatccccagcaagttgcatagctacctgccctcagccatggttccgacacgtctcccaacgacgtcatctccaaaga 6208643  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  6208644 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 6208688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 8283071 - 8282927
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  8283071 cccagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgtcatctccaaaga 8282972  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  8282971 ggatttccaggaatgtgtaatatagcacgagccactgcgtgccca 8282927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 11103972 - 11103828
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11103972 cccagtagagtcttccgagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaaga 11103873  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  11103872 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 11103828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 29142365 - 29142221
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  29142365 cccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccgaaga 29142266  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  29142265 ggatttccaggaatgtgtaatatagcacgagccactacgtgccca 29142221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 31029854 - 31029710
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  31029854 cccagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccgtggttccgatacgtctcccaacgacgtcatctccaaaga 31029755  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  31029754 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 31029710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 35887409 - 35887553
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| |||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  35887409 cccagtagagtctcccaagactctatccccagcaagttgcatagctacctgccctcagccatggttccgacacgtctcccaacgacgtcatctccaaaga 35887508  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  35887509 ggattttcaggaatgtgtaatatagcacgagccactacgtgccca 35887553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 5717703 - 5717870
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtct 146  Q
    |||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||  || ||||||||||||||| |||||||||| ||||||    
T  5717703 atgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtct 5717802  T
Q  147 cccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  5717803 cccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgccca 5717870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 5728613 - 5728780
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtct 146  Q
    |||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||  || ||||||||||||||| |||||||||| ||||||    
T  5728613 atgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtct 5728712  T
Q  147 cccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  5728713 cccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgccca 5728780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 47 - 214
Target Start/End: Complemental strand, 5763755 - 5763588
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtct 146  Q
    |||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||  || ||||||||||||||| |||||||||| ||||||    
T  5763755 atgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtct 5763656  T
Q  147 cccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  5763655 cccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgccca 5763588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 20570503 - 20570300
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || ||||||| |||||||||||||||| |||| ||||  ||||||| | ||||  |||||||||||||||||||||||       
T  20570503 cacagatgcaatgtctacaacatacccagtactgaaatgcccagcacaacggcgttttccccagtggagtctctcaagattctatccccagcaagttaca 20570404  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||| | |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||||| |||||||||||||||||||    
T  20570403 tacctaccggtcctcggccatggttccgatacgtctcccaacgacgtcatctccatagaggatttccaagaatgtgtaatatagcacgagccactacgtg 20570304  T
Q  211 ccca 214  Q
    ||||    
T  20570303 ccca 20570300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 31958103 - 31957900
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| ||||  |||  ||||||| | | ||  |||||||||||| |||||||||||      
T  31958103 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggtgttttccccagtggagcctctcaagattctatctccagcaagttgca 31958004  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| |||||||||||| |||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  31958003 tatctacctgccctcagctatggttccgacacgtctcccaacaacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 31957904  T
Q  211 ccca 214  Q
    ||||    
T  31957903 ccca 31957900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 32297243 - 32297446
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    |||||| || || ||||| || |||||||||||||||||||||||| |||| | ||  |||||||| ||||||||||||||||||| ||||| |||||      
T  32297243 cacagaggcaatgtctacaacatacccagcactgaaatgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcgagttgca 32297342  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||| |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| | |  ||||||||||| |||||||||||||||||||    
T  32297343 tacctaccggccctcggccatggttccgatacgtctcccaacgacgtcatctccatagaggatctccgagaatgtgtaatatagcacgagccactacgtg 32297442  T
Q  211 ccca 214  Q
    ||||    
T  32297443 ccca 32297446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 69 - 214
Target Start/End: Original strand, 19701065 - 19701210
Alignment:
Q  69 ccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaag 168  Q
    ||||||| | ||||||| ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||    
T  19701065 ccccagtagagtcttccgagattctatccccagcaagttgtatagctacctgccctcagtcatggttccgatacgtctcccaatggcgttatctccaaag 19701164  T
Q  169 aggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    | ||||| |||||||||||||| |||||||||||||||||||||||    
T  19701165 aagatttccaggaatgtgtaatatagcacgagccactacgtgccca 19701210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 39 - 214
Target Start/End: Original strand, 4690292 - 4690468
Alignment:
Q  39 gcactgaaatgcccagca-taacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttcc 137  Q
    |||||||||||||||||| | ||| | |||  |||||| | |||| || ||||||||||||||||||||||  |||||||||||||||||||||||| ||    
T  4690292 gcactgaaatgcccagcaatgacggcattattcccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccatggtccc 4690391  T
Q  138 gatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||| ||||||||    
T  4690392 gatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactgcgtgccca 4690468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 5473638 - 5473782
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| |||||||||||||||| |||||  || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5473638 cccagtagagtcttccgagattctatccccagcgagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaaga 5473737  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  5473738 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 5473782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 18057917 - 18058061
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || ||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  18057917 cccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgtcatctccaaaga 18058016  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  18058017 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 18058061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 22864443 - 22864308
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    |||| |||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||    
T  22864443 gtctcccaagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatcttcaaagaggatttcca 22864344  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     ||||||||||| |||||||||||||||||||||||    
T  22864343 agaatgtgtaatatagcacgagccactacgtgccca 22864308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 22879502 - 22879367
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    |||| |||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||    
T  22879502 gtctcccaagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatcttcaaagaggatttcca 22879403  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     ||||||||||| |||||||||||||||||||||||    
T  22879402 agaatgtgtaatatagcacgagccactacgtgccca 22879367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 69 - 214
Target Start/End: Complemental strand, 4340288 - 4340143
Alignment:
Q  69 ccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaag 168  Q
    ||||||| | |||| |||||||||||||||||||||||||  || |||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||    
T  4340288 ccccagtagagtctcccaagattctatccccagcaagttgcatacctacctgccctcagccttggctccgatacgtctcccaacgacgtcatctccaaag 4340189  T
Q  169 aggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||| || ||||||||||| |||||||||||||||||||||||    
T  4340188 aggatttccaagaatgtgtaatatagcacgagccactacgtgccca 4340143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 214
Target Start/End: Original strand, 4423582 - 4423711
Alignment:
Q  85 caagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatg 184  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||    
T  4423582 caagattctatccccagcaagttgcatacctacctgccctcagccatggttccaatacgtctcccaacgacgtcatctccaaagaggatttccaagaatg 4423681  T
Q  185 tgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||||||||||||    
T  4423682 tgtaatatagcacgagccactacgtgccca 4423711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 4790242 - 4790098
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| ||||||||||||||  |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  4790242 cccagtagagtctcccaagattctatccttagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccgaaga 4790143  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||| ||||||||||    
T  4790142 ggatttccaggaatgtgtaatatagcacgagccattacgtgccca 4790098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 18337273 - 18337417
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| |||||||||||||||||||||||||  |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||    
T  18337273 cccagtagagtctcccaagattctatccccagcaagttgcgtagctacctgccctcagccagggttccgacacgtctcccaacgacgtcatctccaaaga 18337372  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||| || |||| |||||||||||||||||||||||    
T  18337373 ggatttccaggaaagtataatatagcacgagccactacgtgccca 18337417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 22381191 - 22381047
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  22381191 cccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgacacgtctcccaacgacgtcatctccaaaga 22381092  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||| || |||| |||||||||||||||||||||||    
T  22381091 ggatttccaggaaagtataatatagcacgagccactacgtgccca 22381047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 32445801 - 32445945
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||    
T  32445801 cccagtagagtctcccaagattctatccccagcaagttgcatagctacctgccctcagccatggttccgacacgtctcccaacgacgtcatcaccaaaga 32445900  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||  |||||||||||||||||||||||    
T  32445901 ggatttccaagaatgtgtaacatagcacgagccactacgtgccca 32445945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 214
Target Start/End: Complemental strand, 15734710 - 15734583
Alignment:
Q  87 agattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtg 186  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||| || |||||||    
T  15734710 agattctatccccagcaagttgcatagctacctgccctcaaccatggtcccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtg 15734611  T
Q  187 taatctagcacgagccactacgtgccca 214  Q
    |||| |||||||||||||||||||||||    
T  15734610 taatatagcacgagccactacgtgccca 15734583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 4630430 - 4630574
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  ||||||| ||||||||||||||||||||| ||||||||||||||||| ||| |||||||    
T  4630430 cccagtagagtcttccgagattctatccccagcaagttgcatagctacatgccctcagccatggttccgacacgtctcccaacgacgtcatcaccaaaga 4630529  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||  |||||||||||||||||||||||    
T  4630530 ggatttccaagaatgtgtaacatagcacgagccactacgtgccca 4630574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 47 - 214
Target Start/End: Complemental strand, 17970492 - 17970324
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatcccca-gcaagttgattagctacctgccctcagccatggttccgatacgtc 145  Q
    |||||||||| |||| ||||  |||| || | ||||  |||||||||||||||| |||||||| |||| ||||||||||||||||||||||| ||| |||    
T  17970492 atgcccagcacaacggcgttttccccggtggagtctctcaagattctatccccaagcaagttgtttagttacctgccctcagccatggttccaatatgtc 17970393  T
Q  146 tcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  17970392 tcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgccca 17970324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 10402764 - 10402967
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| ||||  |||| || ||||||  ||||| |||||||||||||||||       
T  10402764 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcgttttccccggtggggtctctcaagactctatccccagcaagttaca 10402863  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||| |||| | ||||||||||||||||||||||||||||||| ||||||| ||||||| | |  ||||||||||  |||||||||||||||||||    
T  10402864 tacctaccggcccccggccatggttccgatacgtctcccaacgacgtcatctccatagaggatctccgagaatgtgtaacatagcacgagccactacgtg 10402963  T
Q  211 ccca 214  Q
    ||||    
T  10402964 ccca 10402967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 15367877 - 15368059
Alignment:
Q  34 acccagcactgaaatgcccagc-ataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgatta-gctacctgccctcagccat 131  Q
    ||||| |||||||||||||||| || ||| | ||| ||||||  | ||||||| ||||||||||||||||||||||  || |||||| ||||||| ||||    
T  15367877 acccaacactgaaatgcccagcgatgacggcattatccccagcagagtcttccgagattctatccccagcaagttgcatatgctacccgccctcaaccat 15367976  T
Q  132 ggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||||||||||||| ||||||||||||||||||||||| || |||||||| || |||| ||||||||||||||||||    
T  15367977 ggttccgatacgtctcccaatgacgttatctccaaagaggatttccaagaatgtgtgatgtagcgcgagccactacgtgccca 15368059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 20072693 - 20072828
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    |||| |||||||||||||||||||||||||  |||||||| ||||||||||  ||| |||| ||||||||||||||||| ||||||||||||||||| ||    
T  20072693 gtctcccaagattctatccccagcaagttgcatagctaccggccctcagcctaggtcccgaaacgtctcccaacgacgtcatctccaaagaggatttcca 20072792  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     ||||||||||| |||||||||||||||||||||||    
T  20072793 agaatgtgtaatatagcacgagccactacgtgccca 20072828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 21681332 - 21681535
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || ||||||||| |||||||||||||| |||| ||||  |||| |  | ||||  ||||| |||||||||||||||||       
T  21681332 cacagatgcaatgtctacaacatacccagcattgaaatgcccagcacaacggcgttttccccggcggagtctctcaagactctatccccagcaagttaca 21681431  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||| |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| | |  ||||||||||| |||||||||||||||||||    
T  21681432 tacctaccggccctcggccatggttccgatacgtctcccaacgacgtcatctccatagaggatctccgagaatgtgtaatatagcacgagccactacgtg 21681531  T
Q  211 ccca 214  Q
    ||||    
T  21681532 ccca 21681535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 48472590 - 48472725
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    |||| |||||||||||||||||||||||||  |||||||| ||||||||||  ||| |||| ||||||||||||||||| ||||||||||||||||| ||    
T  48472590 gtctcccaagattctatccccagcaagttgcatagctaccggccctcagcctaggtcccgaaacgtctcccaacgacgtcatctccaaagaggatttcca 48472689  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     ||||||||||| |||||||||||||||||||||||    
T  48472690 agaatgtgtaatatagcacgagccactacgtgccca 48472725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 34 - 214
Target Start/End: Complemental strand, 16618116 - 16617934
Alignment:
Q  34 acccagcactgaaatgcccagc-ataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgatta-gctacctgccctcagccat 131  Q
    ||||| |||||||||||||||| || ||  | ||| ||||||  | ||||||| ||||||||||||||||||||||  || |||||| ||||||||||||    
T  16618116 acccaacactgaaatgcccagcgatgacagcattatccccagcggagtcttccgagattctatccccagcaagttgcatatgctacccgccctcagccat 16618017  T
Q  132 ggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| || |||||||| || |||||||||| ||||||||||||    
T  16618016 ggttccgatgcgtctcccaacgacgatatctccaaagaggatttccaagaatgtgtgatatagcacgagctactacgtgccca 16617934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 22041087 - 22041223
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgatta-gctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttac 177  Q
    ||||||| ||||||||||||||||||||||  || |||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |    
T  22041087 gtcttccgagattctatccccagcaagttgcatatgctacccgccctcagccatggttccgatgcgtctcccaacgacgatatctccaaagaggatttcc 22041186  T
Q  178 aggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    | |||||||| || |||||||||| ||||||||||||    
T  22041187 aagaatgtgtgatatagcacgagctactacgtgccca 22041223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 8218273 - 8218440
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtct 146  Q
    |||||||||| |||| ||||  ||||||| | ||||  ||||| |||||| ||||||||||   || ||||| |||||| ||||||||||||||||||||    
T  8218273 atgcccagcacaacggcgttttccccagtggagtctctcaagactctatctccagcaagttacatacctaccggccctcggccatggttccgatacgtct 8218372  T
Q  147 cccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||| ||||||| ||||||||| || ||||||||||| ||||||||||||| |||||||||    
T  8218373 cccaacgacgtcatctccatagaggatttccaagaatgtgtaatatagcacgagccaccacgtgccca 8218440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 85 - 214
Target Start/End: Original strand, 18249404 - 18249533
Alignment:
Q  85 caagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatg 184  Q
    ||||| |||||||||||||||||   || ||||| |||||| ||||||||||||||||||| ||||||||||| ||||||| ||||||||| || |||||    
T  18249404 caagactctatccccagcaagttacatacctaccggccctcggccatggttccgatacgtcccccaacgacgtcatctccatagaggatttccaagaatg 18249503  T
Q  185 tgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||||||||||||    
T  18249504 tgtaatatagcacgagccactacgtgccca 18249533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 28027919 - 28028086
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtct 146  Q
    |||||||||| |||| ||||  |||||||   ||||  ||||||||||||||||||||||||  || ||||| ||||||||||  ||| |||| ||||||    
T  28027919 atgcccagcacaacggcgttttccccagtaaagtctctcaagattctatccccagcaagttgcatacctaccggccctcagcctaggtcccgacacgtct 28028018  T
Q  147 cccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||| |||||| |||||||||| || ||||||||||| |||||||||||||||| ||||||    
T  28028019 cccaacgacgtcatctccgaagaggatttccaagaatgtgtaatgtagcacgagccactacttgccca 28028086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 7079877 - 7079981
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||| |||    
T  7079877 cccagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccttggttccgacacgtctcccaacgacgttatccccagaga 7079976  T
Q  170 ggatt 174  Q
     ||||    
T  7079977 agatt 7079981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 16599394 - 16599428
Alignment:
Q  180 gaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  16599394 gaatgtgtaatatagcacgagccactacgtgccca 16599428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 6e-67; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 11 - 175
Target Start/End: Complemental strand, 27623272 - 27623108
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27623272 cacagatgcgatatctacaacatacccagcactgaaatgcccagcataacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgat 27623173  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggattt 175  Q
    |||||| || |||||||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  27623172 tagctatctaccctcagccatggttctggtacgtctcccaacggcgttatctccaaagaggattt 27623108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 28214094 - 28214297
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||  |||||||   | ||||| |||||| ||  |||||||||||      
T  28214094 cacagatgcgatgtctacaacgtacccagcactgaaatgcccagcataacggcgttttccccagtaaagccttccgagattcaatttccagcaagttgta 28214193  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  28214194 tagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 28214293  T
Q  211 ccca 214  Q
    ||||    
T  28214294 ccca 28214297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 30551553 - 30551350
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||| ||||||||||||||| |||| ||||  |||| |||||||||||||||||||||||||||||||| ||      
T  30551553 cacagatgcaatgtctacaacatacccagcgctgaaatgcccagcacaacggcgttttccccggtcgggtcttccaagattctatccccagcaagatgca 30551454  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  30551453 tagctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 30551354  T
Q  211 ccca 214  Q
    ||||    
T  30551353 ccca 30551350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 27283924 - 27283763
Alignment:
Q  14 agatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||| |||||||||||    
T  27283924 agatgcgatatctacgacgtacccagcactgaaatgcccagcataacggcgttatccccagtcgggtcttccagaattctatccccagtaagttgattag 27283825  T
Q  114 ctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggattt 175  Q
    ||| || |||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  27283824 ctatctaccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggattt 27283763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 34458059 - 34457856
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    |||||||||||| ||||| || |||||||||||||||||||||||| |||| | ||  |||||||| |||||||||||| |||||| |||||||||||      
T  34458059 cacagatgcgatgtctacaacatacccagcactgaaatgcccagcacaacggcattttccccagtcaggtcttccaagactctatctccagcaagttgca 34457960  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||| |||    
T  34457959 tatctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactatgtg 34457860  T
Q  211 ccca 214  Q
    ||||    
T  34457859 ccca 34457856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 27209584 - 27209728
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27209584 cccagtagagtctcccaagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 27209683  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||    
T  27209684 ggatttactggaatatgtaatctagcacgagccactacgtgccca 27209728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 27239644 - 27239500
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27239644 cccagtagagtctcccaagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 27239545  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||    
T  27239544 ggatttactggaatatgtaatctagcacgagccactacgtgccca 27239500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 27064127 - 27064330
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||  || |||||||| ||||||||||||||| |||| ||||  |||||||||||||||||||||||||||| ||||||||| |      
T  27064127 cacagatgcaatgtctataacatacccagcgctgaaatgcccagcacaacggcgttttccccagtcgggtcttccaagattctatctccagcaagtcgca 27064226  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    ||  | |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  27064227 tacttgcctgccctcagccatggttctgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 27064326  T
Q  211 ccca 214  Q
    ||||    
T  27064327 ccca 27064330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 29579660 - 29579863
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||||||||||||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||      
T  29579660 cacagatgcaatgtctacaacatacccagcactgaaatgcccagcacaacggcattctccccagtcaggtcttccaagattctatctccagcaagttgca 29579759  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
     | ||||| |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||||| ||||||| |||||||||||    
T  29579760 cacctaccggccctcggccatggttccgatacgtctcccaacgacgtcatctccatagaggatttccaagaatgtgtaatatagcacgggccactacgtg 29579859  T
Q  211 ccca 214  Q
    ||||    
T  29579860 ccca 29579863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 16756506 - 16756650
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  16756506 cccagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgacacgtctcccaacgacgtcatctccaaaga 16756605  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  16756606 ggatttccaggaatgtgtaatatagcacgagccactacgtgccca 16756650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 4779537 - 4779740
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| |||||| |||||||||||||||||||| |||| ||||  |||||||   |||||||||||||||||| |||||||||||      
T  4779537 cacagatgcaatgtctacaacgtactcagcactgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgca 4779636  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || || |||||||||||||  ||| |||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  4779637 tacctgcctgccctcagcctaggtcccgaaacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 4779736  T
Q  211 ccca 214  Q
    ||||    
T  4779737 ccca 4779740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 24870402 - 24870537
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  24870402 gtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttcca 24870501  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||||| |||||||||||| ||||||||||    
T  24870502 ggaatgtgtaatatagcacgagccattacgtgccca 24870537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 27355656 - 27355453
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| |||||||||||||||| |||||||||| |||| ||||  |||| ||  |||||  ||||||||||||||||||||||||      
T  27355656 cacagatgcaatgtctacaacgtacccagcactgagatgcccagcacaacggcgttttccccggtgaggtctctcaagattctatccccagcaagttgca 27355557  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || |||||||||||||||| ||| ||||||||||| ||||||||||| ||||||| ||||||||| || ||||||||||| |||||||||||||||||||    
T  27355556 tacctacctgccctcagccttggctccgatacgtcccccaacgacgtcatctccatagaggatttccaagaatgtgtaatatagcacgagccactacgtg 27355457  T
Q  211 ccca 214  Q
    ||||    
T  27355456 ccca 27355453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 24299275 - 24299131
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24299275 cccagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaaga 24299176  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||| ||||||||    
T  24299175 ggatttccaagaatgtgtaatatagcacgagccactgcgtgccca 24299131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 33369944 - 33369800
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33369944 cccagtagagtcttccgagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaaga 33369845  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  33369844 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 33369800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 87 - 214
Target Start/End: Complemental strand, 4539256 - 4539129
Alignment:
Q  87 agattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtg 186  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||    
T  4539256 agattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtg 4539157  T
Q  187 taatctagcacgagccactacgtgccca 214  Q
    |||| |||||||||||||||||||||||    
T  4539156 taatatagcacgagccactacgtgccca 4539129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 87 - 214
Target Start/End: Complemental strand, 15406028 - 15405901
Alignment:
Q  87 agattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtg 186  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  15406028 agattctatccccagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgtcatctccaaagaggattttcaggaatgtg 15405929  T
Q  187 taatctagcacgagccactacgtgccca 214  Q
    |||| |||||||||||||||||||||||    
T  15405928 taatatagcacgagccactacgtgccca 15405901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 87 - 214
Target Start/End: Complemental strand, 15417815 - 15417688
Alignment:
Q  87 agattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtg 186  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  15417815 agattctatccccagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgtcatctccaaagaggattttcaggaatgtg 15417716  T
Q  187 taatctagcacgagccactacgtgccca 214  Q
    |||| |||||||||||||||||||||||    
T  15417715 taatatagcacgagccactacgtgccca 15417688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 22928360 - 22928225
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||    
T  22928360 gtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacatctcccaacgatgttatctccaaagaggatttcca 22928261  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||||| |||||||||||| ||||||||||    
T  22928260 ggaatgtgtaatatagcacgagccattacgtgccca 22928225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 14138915 - 14138771
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| |||||||||||||||| |||||  || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14138915 cccagtagagtcttccgagattctatccccagcgagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaaga 14138816  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  14138815 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 14138771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 29508106 - 29508250
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| |||||||||||||||||||||   || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29508106 cccagtagagtcttccgagattctatccccagcaagttacatacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaaga 29508205  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  29508206 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 29508250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 47 - 214
Target Start/End: Complemental strand, 13517731 - 13517564
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtct 146  Q
    |||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||  || ||||||||||||||||  ||| |||||||||||    
T  13517731 atgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagcctaggtcccgatacgtct 13517632  T
Q  147 cccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  13517631 cccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgccca 13517564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 26666210 - 26666007
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||| |||| ||||  |||||||   |||||||||||||||||| |||||||||||      
T  26666210 cacagatgcaatgtctacaacgtacccagcactgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgca 26666111  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || || ||  |||||||||  ||| |||| ||||||||||||||||| ||||||||||||||||| || |||||||| || |||||||||||||||||||    
T  26666110 tacctgcccaccctcagcctaggtcccgaaacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtcatatagcacgagccactacgtg 26666011  T
Q  211 ccca 214  Q
    ||||    
T  26666010 ccca 26666007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 26772181 - 26771978
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||| |||| ||||  |||||||   |||||||||||||||||| |||||||||||      
T  26772181 cacagatgcaatgtctacaacgtacccagcactgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgca 26772082  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || || ||  |||||||||  ||| |||| ||||||||||||||||| ||||||||||||||||| || |||||||| || |||||||||||||||||||    
T  26772081 tacctgcccaccctcagcctaggtcccgaaacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtcatatagcacgagccactacgtg 26771982  T
Q  211 ccca 214  Q
    ||||    
T  26771981 ccca 26771978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 214
Target Start/End: Original strand, 4764462 - 4764591
Alignment:
Q  85 caagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatg 184  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||    
T  4764462 caagattctatccccagcaagttgcatacctacctgccctcagccatggttccaatacgtctcccaacgacgtcatctccaaagaggatttccaagaatg 4764561  T
Q  185 tgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||||||||||||    
T  4764562 tgtaatatagcacgagccactacgtgccca 4764591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 214
Target Start/End: Original strand, 27200897 - 27201026
Alignment:
Q  85 caagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatg 184  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| |    
T  27200897 caagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaagg 27200996  T
Q  185 tgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||| ||||||||||||||||||    
T  27200997 tgtaatatagctcgagccactacgtgccca 27201026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 85 - 214
Target Start/End: Complemental strand, 27248336 - 27248207
Alignment:
Q  85 caagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatg 184  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| |    
T  27248336 caagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaagg 27248237  T
Q  185 tgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||| ||||||||||||||||||    
T  27248236 tgtaatatagctcgagccactacgtgccca 27248207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 27025827 - 27025971
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| |||||||||||||||||||||||||  || ||||| |||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  27025827 cccagtagagtctcccaagattctatccccagcaagttgcataactaccggccctcagccttggtcccgatacgtctcccaacgacgtcatctccaaaga 27025926  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  27025927 ggattttcaggaatgtgtaatatagcacgagccactacgtgccca 27025971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 27031706 - 27031850
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| |||| |||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27031706 cccagtagagtcttccgagatcctatccccagcaagttgcataactacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaaga 27031805  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||| ||||||||||    
T  27031806 ggatttccaagaatgtgtaatatagcacgagccattacgtgccca 27031850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 85 - 214
Target Start/End: Original strand, 26792516 - 26792645
Alignment:
Q  85 caagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatg 184  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||| || |||||    
T  26792516 caagattctatccccagcaagttgcatacctacctgccctcagccatggttccaatacgtctcccaacgacgtcgtctccaaagaggatttccaagaatg 26792615  T
Q  185 tgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||||||||||||    
T  26792616 tgtaatatagcacgagccactacgtgccca 26792645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 26927437 - 26927581
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || |||||||||||||||| ||||||||||||| ||  |||||||| ||||||||||||||||||||||| |||||||||||||||    
T  26927437 cccagtagagtctcccgagattctatccccagcgagttgattagctatctatcctcagccttggttccgatacgtctcccaacggcgttatctccaaaga 26927536  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  26927537 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 26927581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 27014409 - 27014553
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| |||||||||||||||| ||| |  || |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  27014409 cccagtagagtcttccgagattctatccccagcgagtcgcatacctacctgccctcagccatggttccaatacgtctcccaacgacgtcatctccaaaga 27014508  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  27014509 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 27014553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 13292460 - 13292315
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattag-ctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaag 168  Q
    |||||| | |||| |||||||||||||||||||||||||  ||| ||||| |||||||||| |||| |||||||||| ||||||||||| ||||||||||    
T  13292460 cccagtagagtctcccaagattctatccccagcaagttgcatagactaccggccctcagccttggtcccgatacgtcccccaacgacgtcatctccaaag 13292361  T
Q  169 aggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||    
T  13292360 aggatttccaggaatgtgtaatatagcacgagccactacgtgccca 13292315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 87 - 214
Target Start/End: Complemental strand, 26109899 - 26109771
Alignment:
Q  87 agattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctccc-aacgacgttatctccaaagaggatttacaggaatgt 185  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| || ||| ||    
T  26109899 agattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaaacgacgtcatctccaaagaggatttccaagaaggt 26109800  T
Q  186 gtaatctagcacgagccactacgtgccca 214  Q
    ||||  |||||||||||||||||||||||    
T  26109799 gtaacatagcacgagccactacgtgccca 26109771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 8899250 - 8899047
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| |||||||||||||||||||||||| || || | ||||  |||| || | ||||  ||||| |||||||||||||||||       
T  8899250 cacagatgcaatgtctacaacgtacccagcactgaaatgcccaacacaatggcgttttccccggtggagtctctcaagactctatccccagcaagttaca 8899151  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||| |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| | |  ||||||||||  |||||||||||||||||||    
T  8899150 tacctaccggccctcggccatggttccgatacgtctcccaacgacgtcatctccatagaggatctccgagaatgtgtaacatagcacgagccactacgtg 8899051  T
Q  211 ccca 214  Q
    ||||    
T  8899050 ccca 8899047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 27491800 - 27491968
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatcccca-gcaagttgattagctacctgccctcagccatggttccgatacgtc 145  Q
    |||||||||| |||| ||||  |||| ||  |||||  |||||||||||||||| |||||||| ||| ||||||||||||||||||||| |||| |||||    
T  27491800 atgcccagcacaacggcgttttccccggtgaggtctctcaagattctatccccaagcaagttgtttacctacctgccctcagccatggtcccgaaacgtc 27491899  T
Q  146 tcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||||| ||||||||||||||||| || ||| ||||||| |||||||||| ||||||||||||    
T  27491900 tcccaacgacgtcatctccaaagaggatttccaagaaggtgtaatatagcacgagctactacgtgccca 27491968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 29556241 - 29556385
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  |  ||| |||||||||||||||||||||||||||||||||||| ||| |||| |||| |    
T  29556241 cccagtagagtcttccgagattctatccccagcaagttgcatgcctatctgccctcagccatggttccgatacgtctcccaacggcgtcatcttcaaaaa 29556340  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  29556341 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 29556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 4531956 - 4532123
Alignment:
Q  47 atgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtct 146  Q
    |||||||||| |||| | ||| |||||||   ||||  ||||||||||||||||||||||||  |||||||| ||||||||||  ||| |||| ||||||    
T  4531956 atgcccagcacaacggcattatccccagtaaagtctctcaagattctatccccagcaagttgcatagctaccagccctcagcctaggtcccgaaacgtct 4532055  T
Q  147 cccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||| ||||||||||||||||| || ||||||||||| |||| ||||||||||||||||||    
T  4532056 cccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagctcgagccactacgtgccca 4532123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 16680785 - 16680988
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || ||||||||| |||||||||||||| |||| ||||  |||| || | ||||  ||||| |||||||||||||||||       
T  16680785 cacagatgcaatgtctacaacatacccagcattgaaatgcccagcacaacggcgttttccccggtggagtctctcaagactctatccccagcaagttaca 16680884  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||| |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| | |  ||||||||||  ||||||||||||||| |||    
T  16680885 tacctaccggccctcggccatggttccgatacgtctcccaacgacgtcatctccatagaggatctccgagaatgtgtaacatagcacgagccactatgtg 16680984  T
Q  211 ccca 214  Q
    ||||    
T  16680985 ccca 16680988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 28167188 - 28167323
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    |||| |||||| ||||||||||||||||||  |||||||| ||||||||||  ||| |||| ||||||||||||||||| ||||||||||||||||| ||    
T  28167188 gtctcccaagactctatccccagcaagttgcatagctaccggccctcagcctaggtcccgaaacgtctcccaacgacgtcatctccaaagaggatttcca 28167287  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     ||||||||||| |||||||||||||||||||||||    
T  28167288 agaatgtgtaatatagcacgagccactacgtgccca 28167323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 36 - 214
Target Start/End: Complemental strand, 16937554 - 16937376
Alignment:
Q  36 ccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggtt 135  Q
    ||||||||||||||||||||| |||| ||||  ||||||| | ||||  ||||| ||||||||||||||||    || ||||| |||||| |||||||||    
T  16937554 ccagcactgaaatgcccagcacaacggcgttttccccagtggagtctctcaagactctatccccagcaagtcacatacctaccggccctcggccatggtt 16937455  T
Q  136 ccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||||||||||||||| ||||||| |||| || | |  ||||||||||| |||||||||||||||||||||||    
T  16937454 ccgatacgtctcccaacgacgtcatctccatagagaatctccgagaatgtgtaatatagcacgagccactacgtgccca 16937376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 20131252 - 20131349
Alignment:
Q  117 cctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| || |||||||||||||||||||||||    
T  20131252 cctgccctcagccatggtttcgatacgtctcccaacgacgatatctccaaagaggatttccaggaatgtgtgatatagcacgagccactacgtgccca 20131349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 22201618 - 22201521
Alignment:
Q  117 cctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| || |||||||||||||||||||||||    
T  22201618 cctgccctcagccatggtttcgatacgtctcccaacgacgatatctccaaagaggatttccaggaatgtgtgatatagcacgagccactacgtgccca 22201521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 20175335 - 20175388
Alignment:
Q  158 tatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgc 211  Q
    |||||||||||||||||  ||||||||||| |  ||||||||||||||||||||    
T  20175335 tatctccaaagaggattcccaggaatgtgtgacgtagcacgagccactacgtgc 20175388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 22160656 - 22160603
Alignment:
Q  158 tatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgc 211  Q
    |||||||||||||||||  ||||||||||| |  ||||||||||||||||||||    
T  22160656 tatctccaaagaggattcccaggaatgtgtgacgtagcacgagccactacgtgc 22160603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 14592 - 14795
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||  |||||||   | ||||| |||||| ||  |||||||||||      
T  14592 cacagatgcgatgtctacaacgtacccagcactgaaatgcccagcataacggcgttttccccagtaaagccttccgagattcaatttccagcaagttgta 14691  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  14692 tagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 14791  T
Q  211 ccca 214  Q
    ||||    
T  14792 ccca 14795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 2e-66; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 51644874 - 51645077
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| |||||||||| |||||||||||||||| |||| ||||  |||||||   |||||||||||||||||| |||||||||||      
T  51644874 cacagatgcaatgtctacaacgtacccagtactgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgca 51644973  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| || ||||||||||| |||||||||||||||||||    
T  51644974 tagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatcttcaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 51645073  T
Q  211 ccca 214  Q
    ||||    
T  51645074 ccca 51645077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 10951744 - 10951947
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    |||||||||||| | ||| || ||||||| |||||||||||||||| |||| ||||  ||||||| | | ||  |||||||||||| ||||||||||| |    
T  10951744 cacagatgcgatgtttacaacttacccagtactgaaatgcccagcacaacggcgttttccccagtggagcctctcaagattctatctccagcaagttgtt 10951843  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  10951844 tagctacctgccctcagccgtggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 10951943  T
Q  211 ccca 214  Q
    ||||    
T  10951944 ccca 10951947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 34 - 214
Target Start/End: Complemental strand, 20334001 - 20333820
Alignment:
Q  34 acccagcactgaaatgcccagca-taacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatg 132  Q
    ||||||||||||||||||||||| | | | | ||| ||||||  | ||||||  ||||||||||||||||||||||  ||||||||||||||| ||||||    
T  20334001 acccagcactgaaatgcccagcagtgatggcattatccccagcagagtcttctgagattctatccccagcaagttgcatagctacctgccctcggccatg 20333902  T
Q  133 gttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  20333901 gttccgatacgtctcccaacgacgttatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgccca 20333820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 34 - 210
Target Start/End: Original strand, 20467458 - 20467635
Alignment:
Q  34 acccagcactgaaatgcccagc-ataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatg 132  Q
    ||||| |||||||||||||||| || ||| | ||| ||||||  | ||||||| |||||||||||||||||||||   ||||||||| ||||||||||||    
T  20467458 acccaacactgaaatgcccagcgatgacggcattatccccagcagagtcttccgagattctatccccagcaagttacatagctacctaccctcagccatg 20467557  T
Q  133 gttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  20467558 gttccgatatgtctcccaacgacgttatctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtg 20467635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 21891297 - 21891153
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21891297 cccagtagagtcttccgagattctatccccagcaagatgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaaga 21891198  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||| ||||||||||    
T  21891197 ggatttccaggaatgtgtaatatagcacgagccattacgtgccca 21891153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 28591733 - 28591936
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || || ||||||||||||||||||||| |||| ||||  ||||||| | ||||  ||||| |||||||| ||||||||       
T  28591733 cacagatgcaatgtctacaacatatccagcactgaaatgcccagcacaacggcgttttccccagtggagtctctcaagactctatccctagcaagttaca 28591832  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  28591833 tacctaccagccctcggccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 28591932  T
Q  211 ccca 214  Q
    ||||    
T  28591933 ccca 28591936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 34 - 214
Target Start/End: Complemental strand, 16201615 - 16201434
Alignment:
Q  34 acccagcactgaaatgcccagca-taacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatg 132  Q
    |||||||||  ||||||||| || | ||||| ||| ||||||| | ||||||| |||||||| |||||||||||||  ||||||||||||||||| ||||    
T  16201615 acccagcacataaatgcccaacaatgacgacattatccccagtagagtcttccgagattctacccccagcaagttgcatagctacctgccctcagtcatg 16201516  T
Q  133 gttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||    
T  16201515 gttccgatacgtctcccaacggtgttatctccaaagaggatttccaggaatgtgtaatatagcatgagccactacgtgccca 16201434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 14692464 - 14692320
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || ||||||||||||||||||||||  ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||    
T  14692464 cccagtagagtctcccgagattctatccccagcaagttgcatagctacctgctctcagccatggttccgacacgtctcccaacgacgtcatctccaaaga 14692365  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  14692364 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 14692320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 14695146 - 14695002
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || ||||||||||||||||||||||  ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||    
T  14695146 cccagtagagtctcccgagattctatccccagcaagttgcatagctacctgctctcagccatggttccgacacgtctcccaacgacgtcatctccaaaga 14695047  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  14695046 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 14695002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 14697830 - 14697686
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || ||||||||||||||||||||||  ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||    
T  14697830 cccagtagagtctcccgagattctatccccagcaagttgcatagctacctgctctcagccatggttccgacacgtctcccaacgacgtcatctccaaaga 14697731  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  14697730 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 14697686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 14700511 - 14700367
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || ||||||||||||||||||||||  ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||    
T  14700511 cccagtagagtctcccgagattctatccccagcaagttgcatagctacctgctctcagccatggttccgacacgtctcccaacgacgtcatctccaaaga 14700412  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  14700411 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 14700367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 85 - 214
Target Start/End: Original strand, 10969369 - 10969498
Alignment:
Q  85 caagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatg 184  Q
    |||||||||||||||||||||| |  || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  10969369 caagattctatccccagcaagtggcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatg 10969468  T
Q  185 tgtaatctagcacgagccactacgtgccca 214  Q
    |||||| ||||||||| |||||||||||||    
T  10969469 tgtaatatagcacgagtcactacgtgccca 10969498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 3647799 - 3648002
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    |||||| || || ||||| || ||||||||| |||||||||||||| |||| ||||  |||| || | ||||  ||||| |||||||||||||||||       
T  3647799 cacagacgcaatgtctacaacatacccagcattgaaatgcccagcacaacggcgttttccccggtggagtctctcaagactctatccccagcaagttaca 3647898  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| | |  ||||||||||  |||||||||||||||||||    
T  3647899 tacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccatagaggatctccgagaatgtgtaacatagcacgagccactacgtg 3647998  T
Q  211 ccca 214  Q
    ||||    
T  3647999 ccca 3648002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 41786872 - 41786737
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    ||||| |||||||||||| |||||||||||  || || ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  41786872 gtctttcaagattctatctccagcaagttgcatacctgcctgccctcagccgtggttccgatacgtctcccaacgacgtcatctccaaagaggatttcca 41786773  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     ||||||||||| |||||||||||||||||||||||    
T  41786772 agaatgtgtaatatagcacgagccactacgtgccca 41786737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 28156425 - 28156560
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    |||| |||||||||||||||||||||||||  |||||||| ||||||||||  ||| |||| ||||||||||||||||| ||||||||||||||||| ||    
T  28156425 gtctcccaagattctatccccagcaagttgcatagctaccggccctcagcctaggtcccgaaacgtctcccaacgacgtcatctccaaagaggatttcca 28156524  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     ||||||||||| |||||||||||||||||||||||    
T  28156525 agaatgtgtaatatagcacgagccactacgtgccca 28156560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 112; Significance: 8e-57; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 2307 - 2510
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || |||||||| ||||||||||||||| |||| | ||  |||||||| ||||||||||||||||||| |||||||||||      
T  2307 cacagatgcaatgtctacaacatacccagccctgaaatgcccagcacaacggcattttccccagtcaggtcttccaagattctatctccagcaagttgta 2406  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || |||||||||||||||  ||||||||| |||||||||||| |||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  2407 tatctacctgccctcagctttggttccgacacgtctcccaacaacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 2506  T
Q  211 ccca 214  Q
    ||||    
T  2507 ccca 2510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 12722 - 12904
Alignment:
Q  34 acccagcactgaaatgcccagca-taacgacgtta-cccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccat 131  Q
    ||||||||||||||||||||||| | ||| | ||| |||||||  | ||||||| ||||||||||| || ||||||   ||||||||||||||| ||| |    
T  12722 acccagcactgaaatgcccagcaatgacggcattatcccccagcagagtcttccgagattctatccgcaacaagtttcatagctacctgccctcggccgt 12821  T
Q  132 ggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||    
T  12822 ggttccgatacgtctcccaacgacgttatctccaaagaggatttccagggatgtgtaatgtagcacgagccactacgtgccca 12904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 2783 - 2580
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||| | || ||||| || |||||||||||||||||||||||| |||| ||||  ||||||| | | ||  |||||||||||| |||||||||||      
T  2783 cacagatacaatgtctacaacatacccagcactgaaatgcccagcacaacggcgttttccccagtggagcctctcaagattctatctccagcaagttgca 2684  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  2683 tatctacctgccctcagctatggttccgacacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtg 2584  T
Q  211 ccca 214  Q
    ||||    
T  2583 ccca 2580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 18458 - 18582
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||| | || ||||| || |||||||||||||||||||||||| |||| ||||  ||||||| | | ||  |||||||||||| |||||||||||      
T  18458 cacagatacaatgtctacaacatacccagcactgaaatgcccagcacaacggcgttttccccagtggagcctctcaagattctatctccagcaagttgca 18557  T
Q  111 tagctacctgccctcagccatggtt 135  Q
    || ||||||||||||||| ||||||    
T  18558 tatctacctgccctcagctatggtt 18582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 444 - 625
Alignment:
Q  34 acccagcactgaaatgcccagc-ataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatg 132  Q
    |||||||||||||||||||| | |||||| | ||| ||||||  | ||||||| ||||||||||||||||| ||||  |||||||||||||||| |||||    
T  444 acccagcactgaaatgcccaacgataacggcattatccccagcagagtcttccgagattctatccccagcaggttgcatagctacctgccctcaaccatg 543  T
Q  133 gttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||| |||||||||||||    
T  544 gttctgatacgtctcccaacgacgttatctccaaagaggatttccgggaatgtgtaatatagcacgagacactacgtgccca 625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 24521 - 24377
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24521 cccagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaaga 24422  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    | |||| |||||||||||||| |||||||||||| ||||||||||    
T  24421 gaatttccaggaatgtgtaatatagcacgagccattacgtgccca 24377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 10568 - 10772
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || ||||| || ||||||||  |||||||||||||| |||| ||||  |||||||   |||||||||||||||||  |||||||||||      
T  10568 cacagatgcaatgtctacaacatacccagctttgaaatgcccagcacaacggcgttttccccagtaaagtcttccaagattctatttccagcaagttgca 10667  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttac-aggaatgtgtaatctagcacgagccactacgt 209  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||| | || |||||||||| ||||||||||||||||||    
T  10668 tagctacctgtcctcagccatggttccgaaacgtctcccaacgacgtcatctccaaagaggatttccaagaaatgtgtaatatagcacgagccactacgt 10767  T
Q  210 gccca 214  Q
    |||||    
T  10768 gccca 10772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143; HSP #2
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 33981 - 34125
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || ||||||||||| ||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  33981 cccagtagagtctcccgagattctatcctcagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgtcatctccaaaga 34080  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  34081 ggatttccaggaatgtgtaatatagcacgagccactgcgtgccca 34125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 26108 - 25973
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    ||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  26108 gtcttccgagattctttccccagcaagttgcttagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttcca 26009  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     |||||||| || ||||| |||||||||||||||||    
T  26008 agaatgtgtgatatagcatgagccactacgtgccca 25973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 16226 - 16429
Alignment:
Q  11 cacagatgcgatatctacgacgtacccagcactgaaatgcccagcataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgat 110  Q
    ||||||||| || || || ||||||||||||||||||||||||||| |||| ||||  |||| || | ||||  ||||| |||||||||||| ||||       
T  16226 cacagatgcaatgtccacaacgtacccagcactgaaatgcccagcacaacggcgttttccccggtggagtctctcaagactctatccccagccagttaca 16325  T
Q  111 tagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtg 210  Q
    || ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| || ||||||||||||||||    
T  16326 tacctaccggccctcggccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtgtaatataacacgagccactacgtg 16425  T
Q  211 ccca 214  Q
    ||||    
T  16426 ccca 16429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 27966 - 28145
Alignment:
Q  34 acccagcactgaaatgcccagc-ataacgacgttacccccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatg 132  Q
    ||||| |||||||||||||||| || ||| | ||| ||||||  | ||||||| |||||||||||||||||||||   ||||||||||||||||||||||    
T  27966 acccaacactgaaatgcccagcgatgacggcattatccccagcggagtcttccgagattctatccccagcaagttatatagctacctgccctcagccatg 28065  T
Q  133 gttccgatacgtctcccaacgacgttatctccaaagaggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||| || ||  |||||||||||||||||||    
T  28066 gttccgatacgtctcccaacgacgttatctccaaagaggatttccaagaatgtgtgatata--acgagccactacgtgccca 28145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 8479 - 8344
Alignment:
Q  79 gtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttaca 178  Q
    |||||||||||||||||| |||||||||||  || |||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||| ||    
T  8479 gtcttccaagattctatctccagcaagttgcatacctacctgccctcagccttggttctgatacgtctcccaacgacgtcatctccaaagaggatttcca 8380  T
Q  179 ggaatgtgtaatctagcacgagccactacgtgccca 214  Q
     ||||||||||| |||||||||||||||||||||||    
T  8379 agaatgtgtaatatagcacgagccactacgtgccca 8344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 9209 - 9064
Alignment:
Q  70 cccagtcgggtcttccaagattctatcccca-gcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaag 168  Q
    |||||| | ||||||| ||||||||||| || ||||||||  | ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  9209 cccagtagagtcttccgagattctatcctcaagcaagttgcatggctacctgccctcagccatggttccgacacgtctcccaacgacgtcatctccaaag 9110  T
Q  169 aggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    ||||| | |||||||||||||| |||||||||||||||||||||||    
T  9109 aggatgtccaggaatgtgtaatatagcacgagccactacgtgccca 9064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0792 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0792
Description:

Target: scaffold0792; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 4163 - 4019
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| || ||||||||||||||||||||||  |||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  4163 cccagtagagtctcccgagattctatccccagcaagttgcatagctacctgcccttagccatggtcccgatacgtctcccaacgacgtcatctccaaaga 4064  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||| | || ||||||||||| |||||||||||||| ||||||||    
T  4063 ggatgtccaagaatgtgtaatatagcacgagccactgcgtgccca 4019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 12725 - 12869
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaaga 169  Q
    |||||| | |||| |||||| ||||||||||||||||||  |||||||| ||||||||||  ||| |||| ||||||||||||||||| |||||||||||    
T  12725 cccagtagagtctcccaagactctatccccagcaagttgcatagctaccggccctcagcctaggtcccgacacgtctcccaacgacgtcatctccaaaga 12824  T
Q  170 ggatttacaggaatgtgtaatctagcacgagccactacgtgccca 214  Q
    |||||| || ||||||||||| |||||||||||||||||||||||    
T  12825 ggatttccaagaatgtgtaatatagcacgagccactacgtgccca 12869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 70 - 205
Target Start/End: Complemental strand, 40171 - 40032
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttg-attagctacctgccc-tcagccatggttccgatacgtctcccaacgacgttatctccaaa 167  Q
    |||||| | ||||||| |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  40171 cccagtagagtcttccgagattctatccccagcaagttgcattaactacctgcccctcagccatggttccgatacgtctcccaacgacgtcatctccaaa 40072  T
Q  168 gagga-tttacagg-aatgtgtaatctagcacgagccact 205  Q
    ||||| ||| |||| |||||||||| ||||||||||||||    
T  40071 gaggattttccaggaaatgtgtaatatagcacgagccact 40032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 6751 - 6807
Alignment:
Q  70 cccagtcgggtcttccaagattctatccccagcaagttgattagctacctgccctca 126  Q
    |||||| | ||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  6751 cccagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctca 6807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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