View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12671_low_6 (Length: 500)

Name: NF12671_low_6
Description: NF12671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12671_low_6
NF12671_low_6
[»] chr8 (47 HSPs)
chr8 (10-274)||(45471025-45471289)
chr8 (10-264)||(20024860-20025113)
chr8 (282-500)||(20022145-20022364)
chr8 (282-500)||(31722606-31722824)
chr8 (283-487)||(36727164-36727369)
chr8 (10-274)||(22318522-22318786)
chr8 (358-500)||(45469332-45469474)
chr8 (10-274)||(31723176-31723440)
chr8 (282-487)||(23900113-23900319)
chr8 (10-275)||(22244623-22244889)
chr8 (10-182)||(36727984-36728156)
chr8 (22-270)||(23947433-23947680)
chr8 (282-487)||(17906974-17907182)
chr8 (21-159)||(31723481-31723619)
chr8 (10-131)||(5760800-5760921)
chr8 (282-487)||(22254498-22254700)
chr8 (99-274)||(36727721-36727896)
chr8 (300-487)||(17218442-17218627)
chr8 (327-487)||(23948031-23948189)
chr8 (300-487)||(23419183-23419368)
chr8 (282-363)||(45470591-45470673)
chr8 (22-274)||(17907535-17907788)
chr8 (282-467)||(19699883-19700067)
chr8 (119-271)||(9491-9642)
chr8 (67-131)||(21346063-21346127)
chr8 (326-500)||(22318023-22318197)
chr8 (395-467)||(18761284-18761356)
chr8 (67-131)||(23914248-23914312)
chr8 (70-125)||(6102462-6102517)
chr8 (22-211)||(22584363-22584554)
chr8 (22-159)||(23888957-23889095)
chr8 (70-144)||(20084328-20084402)
chr8 (179-274)||(17217978-17218073)
chr8 (376-445)||(13661021-13661090)
chr8 (376-445)||(13719664-13719733)
chr8 (179-264)||(19699458-19699542)
chr8 (169-211)||(23450837-23450879)
chr8 (169-211)||(34301915-34301957)
chr8 (318-469)||(37516368-37516517)
chr8 (22-114)||(17217821-17217913)
chr8 (15-80)||(36727896-36727961)
chr8 (218-274)||(23900670-23900726)
chr8 (181-236)||(14103065-14103120)
chr8 (395-469)||(19928900-19928974)
chr8 (181-242)||(22253000-22253061)
chr8 (169-206)||(24495949-24495986)
chr8 (181-257)||(22963240-22963315)
[»] chr7 (58 HSPs)
chr7 (15-274)||(13132934-13133193)
chr7 (290-500)||(48807438-48807649)
chr7 (38-274)||(48809097-48809332)
chr7 (10-274)||(15096252-15096516)
chr7 (10-274)||(19557892-19558156)
chr7 (15-274)||(14219580-14219839)
chr7 (300-498)||(16078072-16078269)
chr7 (55-274)||(16077587-16077806)
chr7 (286-498)||(14219011-14219224)
chr7 (300-500)||(13132433-13132633)
chr7 (10-274)||(15139343-15139608)
chr7 (284-487)||(4071542-4071746)
chr7 (10-159)||(13133239-13133388)
chr7 (300-487)||(15288845-15289030)
chr7 (315-500)||(15139968-15140153)
chr7 (300-500)||(15095749-15095949)
chr7 (282-498)||(35771557-35771774)
chr7 (10-131)||(1489935-1490056)
chr7 (50-274)||(22000832-22001054)
chr7 (25-211)||(11053866-11054053)
chr7 (300-487)||(10658977-10659162)
chr7 (50-243)||(8135719-8135912)
chr7 (300-500)||(8135349-8135549)
chr7 (319-487)||(36704697-36704863)
chr7 (67-131)||(14258676-14258740)
chr7 (67-131)||(16460596-16460660)
chr7 (67-131)||(16579984-16580048)
chr7 (67-131)||(16585615-16585679)
chr7 (67-131)||(32301506-32301570)
chr7 (70-141)||(14929026-14929097)
chr7 (70-141)||(15352492-15352563)
chr7 (22-131)||(33001194-33001302)
chr7 (55-274)||(4070991-4071210)
chr7 (24-131)||(8757105-8757213)
chr7 (67-131)||(20487767-20487831)
chr7 (22-131)||(3289531-3289641)
chr7 (22-271)||(15281496-15281744)
chr7 (187-255)||(130637-130705)
chr7 (22-77)||(20253419-20253475)
chr7 (24-131)||(40555452-40555560)
chr7 (181-271)||(36705238-36705327)
chr7 (398-467)||(18074780-18074849)
chr7 (404-480)||(11054556-11054632)
chr7 (24-131)||(12755415-12755523)
chr7 (139-254)||(16996404-16996519)
chr7 (92-131)||(32434254-32434293)
chr7 (24-211)||(14191717-14191906)
chr7 (24-131)||(832732-832840)
chr7 (24-131)||(1197912-1198020)
chr7 (24-131)||(4325291-4325399)
chr7 (24-131)||(13408007-13408115)
chr7 (180-236)||(14036422-14036478)
chr7 (180-236)||(14044972-14045028)
chr7 (180-236)||(14346452-14346508)
chr7 (180-236)||(14355002-14355058)
chr7 (180-236)||(16091981-16092037)
chr7 (11-94)||(17071035-17071119)
chr7 (30-94)||(47094319-47094383)
[»] chr3 (66 HSPs)
chr3 (35-274)||(17258792-17259031)
chr3 (300-498)||(13185633-13185831)
chr3 (282-500)||(11563456-11563664)
chr3 (50-248)||(11562880-11563078)
chr3 (10-159)||(11192158-11192307)
chr3 (10-159)||(11562646-11562795)
chr3 (10-153)||(6155854-6155998)
chr3 (55-270)||(13179407-13179623)
chr3 (10-131)||(17691469-17691590)
chr3 (10-131)||(19569033-19569154)
chr3 (10-131)||(54876147-54876268)
chr3 (10-131)||(11192348-11192469)
chr3 (10-131)||(17046429-17046550)
chr3 (304-487)||(11885683-11885864)
chr3 (10-131)||(14441435-14441556)
chr3 (10-131)||(17685507-17685628)
chr3 (39-131)||(6156002-6156094)
chr3 (395-487)||(16050762-16050854)
chr3 (55-131)||(9511829-9511905)
chr3 (55-131)||(9519804-9519880)
chr3 (395-487)||(12509476-12509568)
chr3 (70-141)||(42353367-42353438)
chr3 (22-211)||(20417311-20417501)
chr3 (67-131)||(12470126-12470190)
chr3 (67-131)||(14671148-14671212)
chr3 (67-131)||(14682647-14682711)
chr3 (24-211)||(14818259-14818447)
chr3 (67-131)||(18700137-18700201)
chr3 (70-144)||(13519570-13519644)
chr3 (52-274)||(16059494-16059715)
chr3 (71-131)||(43889463-43889523)
chr3 (24-211)||(52338594-52338782)
chr3 (22-124)||(23395776-23395879)
chr3 (144-211)||(45531248-45531315)
chr3 (24-131)||(10550503-10550611)
chr3 (24-131)||(17548260-17548368)
chr3 (22-131)||(13523120-13523230)
chr3 (404-466)||(15447013-15447075)
chr3 (182-271)||(12512388-12512476)
chr3 (300-345)||(16050702-16050747)
chr3 (24-131)||(3394711-3394819)
chr3 (395-487)||(14250207-14250299)
chr3 (169-211)||(12158648-12158690)
chr3 (52-274)||(16044634-16044855)
chr3 (54-132)||(16050113-16050190)
chr3 (174-211)||(17548176-17548213)
chr3 (24-131)||(18367467-18367575)
chr3 (179-274)||(11886238-11886332)
chr3 (398-469)||(42324115-42324186)
chr3 (24-121)||(13520500-13520598)
chr3 (188-257)||(15447584-15447654)
chr3 (30-94)||(6158636-6158701)
chr3 (55-131)||(6819375-6819452)
chr3 (174-211)||(10550654-10550691)
chr3 (218-271)||(14250693-14250746)
chr3 (30-94)||(14642298-14642363)
chr3 (404-469)||(22146901-22146966)
chr3 (282-368)||(23052524-23052608)
chr3 (404-469)||(37641637-37641702)
chr3 (24-131)||(179416-179524)
chr3 (35-141)||(15932201-15932308)
chr3 (31-141)||(17519567-17519678)
chr3 (31-141)||(17534429-17534540)
chr3 (35-141)||(41173065-41173172)
chr3 (11-94)||(42324969-42325053)
chr3 (24-131)||(52213186-52213294)
[»] chr2 (26 HSPs)
chr2 (282-500)||(3539557-3539776)
chr2 (10-274)||(3538960-3539225)
chr2 (283-489)||(18390338-18390545)
chr2 (282-500)||(25141924-25142143)
chr2 (10-274)||(22259193-22259457)
chr2 (317-497)||(27852423-27852603)
chr2 (22-275)||(44071724-44071977)
chr2 (10-264)||(25141307-25141561)
chr2 (55-274)||(27851844-27852063)
chr2 (22-274)||(27860517-27860769)
chr2 (300-496)||(44072297-44072493)
chr2 (282-487)||(5985899-5986103)
chr2 (10-159)||(25141117-25141266)
chr2 (327-487)||(14694094-14694252)
chr2 (55-274)||(18390896-18391116)
chr2 (347-493)||(22259825-22259971)
chr2 (300-487)||(25045860-25046045)
chr2 (67-131)||(9784906-9784970)
chr2 (120-242)||(10897138-10897260)
chr2 (35-274)||(14693457-14693696)
chr2 (79-131)||(23069114-23069166)
chr2 (174-236)||(5985470-5985532)
chr2 (35-211)||(19358182-19358356)
chr2 (174-211)||(6477921-6477958)
chr2 (24-111)||(6478029-6478117)
chr2 (179-271)||(25045396-25045486)
[»] scaffold1695 (2 HSPs)
scaffold1695 (7-274)||(580-847)
scaffold1695 (300-342)||(1147-1189)
[»] scaffold0628 (3 HSPs)
scaffold0628 (282-500)||(1171-1390)
scaffold0628 (108-274)||(4096-4260)
scaffold0628 (108-274)||(8656-8820)
[»] scaffold0008 (3 HSPs)
scaffold0008 (10-274)||(136184-136448)
scaffold0008 (315-498)||(135618-135801)
scaffold0008 (300-341)||(135825-135866)
[»] chr5 (29 HSPs)
chr5 (10-274)||(21618608-21618871)
chr5 (38-274)||(29914523-29914759)
chr5 (282-498)||(21618043-21618257)
chr5 (18-157)||(20565639-20565778)
chr5 (300-487)||(10953831-10954016)
chr5 (55-274)||(20469692-20469912)
chr5 (10-141)||(20565821-20565952)
chr5 (301-487)||(25249953-25250137)
chr5 (301-487)||(25313737-25313921)
chr5 (406-487)||(20469302-20469383)
chr5 (35-144)||(32608055-32608163)
chr5 (50-211)||(22357587-22357749)
chr5 (35-201)||(21406324-21406489)
chr5 (282-423)||(29915010-29915152)
chr5 (78-144)||(36509507-36509573)
chr5 (174-271)||(25250468-25250565)
chr5 (174-271)||(25314253-25314350)
chr5 (395-466)||(30616449-30616520)
chr5 (24-121)||(24277325-24277423)
chr5 (24-121)||(24384790-24384888)
chr5 (24-131)||(8952761-8952867)
chr5 (182-263)||(10953368-10953448)
chr5 (181-236)||(25576696-25576751)
chr5 (174-211)||(8952681-8952718)
chr5 (7-90)||(17812614-17812698)
chr5 (22-109)||(25250623-25250709)
chr5 (22-109)||(25314408-25314494)
chr5 (189-257)||(25574290-25574357)
chr5 (189-257)||(25575483-25575550)
[»] scaffold0031 (1 HSPs)
scaffold0031 (282-498)||(108017-108229)
[»] chr6 (36 HSPs)
chr6 (282-500)||(23501392-23501611)
chr6 (50-274)||(23500888-23501112)
chr6 (282-487)||(31732031-31732235)
chr6 (10-274)||(6083355-6083617)
chr6 (22-242)||(31735522-31735742)
chr6 (10-159)||(23491997-23492146)
chr6 (10-159)||(23497595-23497744)
chr6 (10-131)||(19655893-19656014)
chr6 (282-467)||(24550313-24550497)
chr6 (22-208)||(22212139-22212327)
chr6 (15-131)||(23491835-23491951)
chr6 (15-131)||(23497433-23497549)
chr6 (67-141)||(15705265-15705339)
chr6 (70-131)||(22806160-22806221)
chr6 (67-131)||(19773373-19773437)
chr6 (62-141)||(28947663-28947742)
chr6 (70-144)||(23655665-23655739)
chr6 (24-131)||(19443991-19444099)
chr6 (24-131)||(13751063-13751171)
chr6 (30-131)||(16133381-16133483)
chr6 (30-131)||(18658447-18658549)
chr6 (404-466)||(20177839-20177901)
chr6 (404-466)||(22158090-22158152)
chr6 (149-274)||(22376480-22376605)
chr6 (24-211)||(24267000-24267188)
chr6 (24-121)||(29848224-29848322)
chr6 (24-119)||(610975-611071)
chr6 (149-253)||(20077998-20078102)
chr6 (92-131)||(17318786-17318825)
chr6 (404-469)||(8226873-8226938)
chr6 (404-469)||(23532029-23532094)
chr6 (182-271)||(24550851-24550939)
chr6 (15-94)||(19829700-19829780)
chr6 (92-144)||(23655727-23655779)
chr6 (404-480)||(25753282-25753358)
chr6 (404-480)||(25755452-25755528)
[»] scaffold0251 (2 HSPs)
scaffold0251 (22-274)||(20591-20843)
scaffold0251 (347-496)||(20202-20348)
[»] scaffold0028 (2 HSPs)
scaffold0028 (20-264)||(3665-3909)
scaffold0028 (394-500)||(3164-3269)
[»] scaffold0004 (4 HSPs)
scaffold0004 (300-487)||(109914-110100)
scaffold0004 (55-274)||(109431-109650)
scaffold0004 (22-131)||(59576-59686)
scaffold0004 (174-211)||(59733-59770)
[»] scaffold0056 (2 HSPs)
scaffold0056 (22-274)||(66244-66496)
scaffold0056 (282-498)||(66841-67057)
[»] chr1 (38 HSPs)
chr1 (282-498)||(13302625-13302841)
chr1 (55-274)||(13302053-13302272)
chr1 (283-487)||(45755244-45755447)
chr1 (392-500)||(7320706-7320814)
chr1 (300-487)||(24727124-24727309)
chr1 (282-467)||(42697506-42697690)
chr1 (10-211)||(52983366-52983568)
chr1 (35-144)||(38887818-38887926)
chr1 (22-141)||(21239949-21240069)
chr1 (70-141)||(14238306-14238377)
chr1 (9-131)||(18275135-18275258)
chr1 (70-141)||(51082503-51082574)
chr1 (395-466)||(51336334-51336405)
chr1 (35-141)||(7052749-7052854)
chr1 (22-159)||(51476209-51476347)
chr1 (50-131)||(51323582-51323663)
chr1 (395-466)||(12327889-12327960)
chr1 (24-131)||(13528503-13528611)
chr1 (179-271)||(45754850-45754941)
chr1 (174-248)||(42697105-42697179)
chr1 (24-131)||(18823841-18823949)
chr1 (89-152)||(7321491-7321554)
chr1 (9-131)||(18270481-18270604)
chr1 (174-211)||(13528419-13528456)
chr1 (24-120)||(21181045-21181142)
chr1 (24-131)||(7792561-7792669)
chr1 (92-131)||(4596509-4596548)
chr1 (179-264)||(12328432-12328517)
chr1 (188-254)||(22124517-22124583)
chr1 (22-115)||(42696954-42697046)
chr1 (464-500)||(8276102-8276139)
chr1 (7-95)||(10813268-10813357)
chr1 (464-500)||(38056785-38056822)
chr1 (30-94)||(38057399-38057464)
chr1 (404-469)||(51476836-51476901)
chr1 (179-211)||(18823997-18824029)
chr1 (35-141)||(21046743-21046850)
chr1 (169-264)||(51327010-51327105)
[»] scaffold1186 (2 HSPs)
scaffold1186 (10-159)||(788-937)
scaffold1186 (10-131)||(978-1099)
[»] scaffold0371 (2 HSPs)
scaffold0371 (10-159)||(16825-16974)
scaffold0371 (169-211)||(3243-3285)
[»] scaffold0005 (2 HSPs)
scaffold0005 (10-159)||(187331-187480)
scaffold0005 (10-131)||(187169-187290)
[»] chr4 (37 HSPs)
chr4 (10-159)||(14629903-14630052)
chr4 (55-159)||(16026770-16026874)
chr4 (18-157)||(9638046-9638185)
chr4 (282-487)||(32466321-32466525)
chr4 (10-131)||(53631137-53631258)
chr4 (15-132)||(16026619-16026736)
chr4 (282-482)||(15612815-15613013)
chr4 (303-487)||(21062385-21062567)
chr4 (10-131)||(14630093-14630214)
chr4 (22-271)||(21061759-21062009)
chr4 (50-131)||(13036441-13036522)
chr4 (282-465)||(51993284-51993466)
chr4 (35-141)||(3485164-3485269)
chr4 (24-131)||(4615775-4615883)
chr4 (395-467)||(35811520-35811592)
chr4 (22-131)||(2584920-2585030)
chr4 (22-131)||(6511807-6511917)
chr4 (24-209)||(27027970-27028156)
chr4 (84-141)||(19734587-19734644)
chr4 (411-487)||(21046-21122)
chr4 (24-131)||(13446687-13446795)
chr4 (24-211)||(14933070-14933258)
chr4 (24-131)||(20899469-20899577)
chr4 (35-141)||(33243950-33244056)
chr4 (139-274)||(50160346-50160480)
chr4 (10-94)||(9638226-9638311)
chr4 (24-131)||(15448120-15448228)
chr4 (139-257)||(26050295-26050413)
chr4 (174-211)||(14942275-14942312)
chr4 (282-345)||(20936-21000)
chr4 (404-480)||(9870578-9870654)
chr4 (179-271)||(51992914-51993004)
chr4 (174-211)||(4615695-4615732)
chr4 (464-500)||(9638912-9638949)
chr4 (174-211)||(20899389-20899426)
chr4 (404-469)||(22354522-22354587)
chr4 (92-140)||(19609673-19609721)
[»] scaffold0241 (4 HSPs)
scaffold0241 (18-182)||(1620-1784)
scaffold0241 (10-132)||(4955-5077)
scaffold0241 (15-132)||(1807-1924)
scaffold0241 (18-159)||(4773-4914)
[»] scaffold0529 (3 HSPs)
scaffold0529 (18-159)||(7572-7713)
scaffold0529 (16-125)||(7761-7870)
scaffold0529 (395-478)||(4002-4085)
[»] scaffold0520 (1 HSPs)
scaffold0520 (10-211)||(89-290)
[»] scaffold0002 (2 HSPs)
scaffold0002 (55-270)||(127365-127581)
scaffold0002 (300-467)||(398303-398468)
[»] scaffold0859 (2 HSPs)
scaffold0859 (50-274)||(3942-4166)
scaffold0859 (318-500)||(4440-4622)
[»] scaffold0010 (2 HSPs)
scaffold0010 (282-487)||(126429-126633)
scaffold0010 (174-236)||(127022-127084)
[»] scaffold1283 (1 HSPs)
scaffold1283 (10-131)||(1131-1252)
[»] scaffold0061 (2 HSPs)
scaffold0061 (10-131)||(15250-15371)
scaffold0061 (10-131)||(24308-24429)
[»] scaffold0175 (2 HSPs)
scaffold0175 (349-500)||(8430-8581)
scaffold0175 (97-216)||(18142-18262)
[»] scaffold0671 (1 HSPs)
scaffold0671 (300-487)||(4682-4867)
[»] scaffold0439 (2 HSPs)
scaffold0439 (10-131)||(3686-3807)
scaffold0439 (70-144)||(11447-11521)
[»] scaffold0042 (3 HSPs)
scaffold0042 (282-487)||(29112-29314)
scaffold0042 (41-264)||(28531-28751)
scaffold0042 (165-211)||(47195-47241)
[»] scaffold0409 (2 HSPs)
scaffold0409 (36-264)||(474-702)
scaffold0409 (36-264)||(8729-8957)
[»] scaffold0113 (2 HSPs)
scaffold0113 (10-131)||(34496-34617)
scaffold0113 (327-370)||(32690-32730)
[»] scaffold0021 (1 HSPs)
scaffold0021 (10-131)||(168704-168825)
[»] scaffold0077 (4 HSPs)
scaffold0077 (300-487)||(5690-5876)
scaffold0077 (35-141)||(33603-33708)
scaffold0077 (50-153)||(14334-14437)
scaffold0077 (179-264)||(3105-3189)
[»] scaffold0589 (2 HSPs)
scaffold0589 (300-467)||(4126-4291)
scaffold0589 (218-271)||(3701-3754)
[»] scaffold0445 (1 HSPs)
scaffold0445 (58-274)||(2498-2716)
[»] scaffold0220 (3 HSPs)
scaffold0220 (304-487)||(19695-19881)
scaffold0220 (11-94)||(15984-16068)
scaffold0220 (463-500)||(13850-13888)
[»] scaffold0285 (1 HSPs)
scaffold0285 (50-242)||(18973-19166)
[»] scaffold0003 (2 HSPs)
scaffold0003 (395-476)||(96233-96314)
scaffold0003 (179-274)||(95676-95771)
[»] scaffold0181 (1 HSPs)
scaffold0181 (22-131)||(34100-34210)
[»] scaffold0017 (1 HSPs)
scaffold0017 (57-131)||(25830-25904)
[»] scaffold0065 (2 HSPs)
scaffold0065 (395-484)||(52673-52762)
scaffold0065 (327-469)||(55710-55850)
[»] scaffold0026 (1 HSPs)
scaffold0026 (36-141)||(145987-146091)
[»] scaffold0292 (1 HSPs)
scaffold0292 (67-131)||(6837-6901)
[»] scaffold0018 (1 HSPs)
scaffold0018 (67-131)||(20976-21040)
[»] scaffold0146 (1 HSPs)
scaffold0146 (70-141)||(22345-22416)
[»] scaffold0019 (1 HSPs)
scaffold0019 (70-141)||(29445-29516)
[»] scaffold0309 (4 HSPs)
scaffold0309 (22-131)||(6139-6249)
scaffold0309 (22-131)||(8291-8401)
scaffold0309 (174-211)||(6292-6329)
scaffold0309 (174-211)||(8444-8481)
[»] scaffold0207 (1 HSPs)
scaffold0207 (35-141)||(15203-15308)
[»] scaffold0151 (2 HSPs)
scaffold0151 (180-274)||(30409-30503)
scaffold0151 (282-421)||(30832-30970)
[»] scaffold0338 (2 HSPs)
scaffold0338 (126-271)||(11395-11540)
scaffold0338 (395-478)||(10895-10978)
[»] scaffold0205 (1 HSPs)
scaffold0205 (70-131)||(29897-29958)
[»] scaffold0575 (1 HSPs)
scaffold0575 (67-131)||(5990-6054)
[»] scaffold0490 (2 HSPs)
scaffold0490 (24-131)||(5059-5167)
scaffold0490 (174-210)||(5210-5246)
[»] scaffold0273 (1 HSPs)
scaffold0273 (24-211)||(6855-7043)
[»] scaffold0107 (1 HSPs)
scaffold0107 (24-211)||(3113-3301)
[»] scaffold0096 (1 HSPs)
scaffold0096 (67-131)||(21392-21456)
[»] scaffold0546 (2 HSPs)
scaffold0546 (70-141)||(11082-11153)
scaffold0546 (35-141)||(7228-7333)
[»] scaffold0109 (2 HSPs)
scaffold0109 (70-141)||(671-742)
scaffold0109 (35-141)||(5974-6079)
[»] scaffold0047 (1 HSPs)
scaffold0047 (16-131)||(78296-78410)
[»] scaffold0453 (1 HSPs)
scaffold0453 (22-211)||(3268-3458)
[»] scaffold1633 (1 HSPs)
scaffold1633 (78-131)||(503-556)
[»] scaffold0098 (1 HSPs)
scaffold0098 (50-131)||(39406-39487)
[»] scaffold0188 (1 HSPs)
scaffold0188 (24-131)||(346-454)
[»] scaffold0039 (1 HSPs)
scaffold0039 (78-125)||(10639-10686)
[»] scaffold0716 (2 HSPs)
scaffold0716 (126-211)||(1217-1302)
scaffold0716 (300-468)||(1805-1971)
[»] scaffold0232 (1 HSPs)
scaffold0232 (82-131)||(3609-3658)
[»] scaffold2046 (1 HSPs)
scaffold2046 (24-131)||(345-453)
[»] scaffold0452 (1 HSPs)
scaffold0452 (67-131)||(13329-13393)
[»] scaffold0075 (2 HSPs)
scaffold0075 (411-487)||(60745-60821)
scaffold0075 (282-345)||(60635-60699)
[»] scaffold0034 (2 HSPs)
scaffold0034 (67-131)||(120234-120298)
scaffold0034 (327-417)||(34122-34209)
[»] scaffold0331 (2 HSPs)
scaffold0331 (137-255)||(12721-12838)
scaffold0331 (174-211)||(4086-4123)
[»] scaffold0083 (2 HSPs)
scaffold0083 (22-131)||(646-754)
scaffold0083 (22-131)||(5950-6058)
[»] scaffold0071 (2 HSPs)
scaffold0071 (404-466)||(15117-15179)
scaffold0071 (188-257)||(14538-14608)
[»] scaffold0413 (2 HSPs)
scaffold0413 (23-131)||(10910-11019)
scaffold0413 (174-212)||(11062-11100)
[»] scaffold0321 (1 HSPs)
scaffold0321 (182-271)||(572-660)
[»] scaffold0117 (2 HSPs)
scaffold0117 (24-131)||(40934-41042)
scaffold0117 (174-211)||(40854-40891)
[»] scaffold1276 (1 HSPs)
scaffold1276 (95-152)||(388-445)
[»] scaffold0293 (1 HSPs)
scaffold0293 (181-254)||(17727-17800)
[»] scaffold0429 (2 HSPs)
scaffold0429 (24-123)||(2707-2807)
scaffold0429 (174-211)||(2619-2656)
[»] scaffold1815 (1 HSPs)
scaffold1815 (35-102)||(1269-1335)
[»] scaffold0356 (1 HSPs)
scaffold0356 (181-236)||(502-557)
[»] scaffold0009 (1 HSPs)
scaffold0009 (181-236)||(85770-85825)
[»] scaffold0607 (1 HSPs)
scaffold0607 (24-121)||(2941-3039)
[»] scaffold0379 (1 HSPs)
scaffold0379 (179-257)||(14432-14510)
[»] scaffold0377 (1 HSPs)
scaffold0377 (169-211)||(16743-16785)
[»] scaffold0149 (2 HSPs)
scaffold0149 (169-211)||(36183-36225)
scaffold0149 (30-94)||(20888-20953)
[»] scaffold0070 (1 HSPs)
scaffold0070 (24-121)||(8292-8390)
[»] scaffold0630 (1 HSPs)
scaffold0630 (30-94)||(8303-8368)
[»] scaffold0123 (1 HSPs)
scaffold0123 (174-211)||(1905-1942)
[»] scaffold1662 (1 HSPs)
scaffold1662 (35-141)||(115-222)
[»] scaffold0825 (1 HSPs)
scaffold0825 (22-121)||(1534-1634)
[»] scaffold0737 (2 HSPs)
scaffold0737 (35-141)||(5407-5514)
scaffold0737 (412-480)||(5951-6019)
[»] scaffold0375 (1 HSPs)
scaffold0375 (35-141)||(8997-9104)
[»] scaffold0126 (1 HSPs)
scaffold0126 (24-131)||(6034-6142)
[»] scaffold0112 (1 HSPs)
scaffold0112 (89-152)||(2132-2193)


Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-128; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 10 - 274
Target Start/End: Complemental strand, 45471289 - 45471025
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45471289 gacagcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 45471190  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaac 209  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  45471189 atgtatctcaaattatccaacatcaatatttatattaattcagactcactacacaacaatataattatgaacaactttcattcctatcccaaggaccaac 45471090  T
Q  210 tcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  45471089 tcggaacgtcacgtccgaaaaagatcgcaagaaaactaaacaaggttgactgccactgagtaact 45471025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 10 - 264
Target Start/End: Complemental strand, 20025113 - 20024860
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20025113 gacaacaacaataacaacttgcaacatagcaacattaatcacattaacttgaatgatatgaacaacaatatttctata-catacaatattcacataatat 20025015  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaac 209  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20025014 atgtatctcaaattatccaacatcaatattcatattaattcagactcactacacaaaaatataattatgaacaacttccattcctaccccaaggaccaac 20024915  T
Q  210 tcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgcca 264  Q
    ||||||||||||||||||||||||| | ||||| |||||||||||||||||||||    
T  20024914 tcggaacgtcacgtgcgaaaaagattgcaagaacactaaacaaggttgactgcca 20024860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 282 - 500
Target Start/End: Complemental strand, 20022364 - 20022145
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactca 380  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  20022364 agcgatgaagatgatcactcgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacggccagaatgcagttttcaacaaaactca 20022265  T
Q  381 cctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttcta 480  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  20022264 cctaattccataactctaaccttaaaattgattctaatcattgttctatgaataacctaaggtctagacactaattctacatcaattcatcagatttcca 20022165  T
Q  481 ctcttaaatcaaccaattac 500  Q
    ||||||||||||||||||||    
T  20022164 ctcttaaatcaaccaattac 20022145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 282 - 500
Target Start/End: Complemental strand, 31722824 - 31722606
Alignment:
Q  282 agcgatgaagatgatcacc-gcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactca 380  Q
    ||||||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31722824 agcgatgaagatgatcacttgtgaggcgagaactgttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaaaactca 31722725  T
Q  381 cctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttcta 480  Q
    || |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| || ||||||||||||||| ||||||||||    
T  31722724 cc-aattccatgactctaaccttaaaactgattctaatcattgttctatggataacctaaggtctggacattaattctacatcaattcaacagatttcta 31722626  T
Q  481 ctcttaaatcaaccaattac 500  Q
    ||||||||||||||||||||    
T  31722625 ctcttaaatcaaccaattac 31722606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 283 - 487
Target Start/End: Complemental strand, 36727369 - 36727164
Alignment:
Q  283 gcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactcac 381  Q
    |||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||| || ||||||| ||||||||||||||||  || ||||||    
T  36727369 gcgatgaagatgataactcgcgaggcgagaacagctactcgctatggcgagcgatgaatgtaagctctacggacagaatgcagttttcacaaaaactcac 36727270  T
Q  382 ctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctac 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||| ||||    
T  36727269 ctaattccataactctaaccttaaaactgattctaatcattgttctatgaataatctaaggtctggacactatttctacatcaattcaacagattcctac 36727170  T
Q  482 tcttaa 487  Q
    ||||||    
T  36727169 tcttaa 36727164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 10 - 274
Target Start/End: Complemental strand, 22318786 - 22318522
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||| ||||| |||| ||| |||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  22318786 gacagcaacaatatcaacttgcaacataacaacattaacaacaacaacttgaatgatatgaacaacaatatttctatatcatacaatatccacgtaatat 22318687  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaac 209  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||  |  |||||| |||||| | |||||| ||||||||||||||  ||||||    
T  22318686 atgtatctcaaattatccaacaacaatattcatattaattcagactcactgaaagacaatacaattataagcaactttcattcctaccccaaaaaccaac 22318587  T
Q  210 tcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    || ||||||||||||||| |||||||| ||||| |||||| |||| ||||||||| |||||||||    
T  22318586 tcagaacgtcacgtgcgacaaagatcgcaagaacactaaataaggctgactgccactgagtaact 22318522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 358 - 500
Target Start/End: Complemental strand, 45469474 - 45469332
Alignment:
Q  358 aatgcagttttcaacaagactcacctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttc 457  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45469474 aatgcagttttcaacaagactcacctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttc 45469375  T
Q  458 tacatcaattcatcagatttctactcttaaatcaaccaattac 500  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  45469374 tacatcaattcatcaaatttctactcttaaatcaaccaattac 45469332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 10 - 274
Target Start/End: Complemental strand, 31723440 - 31723176
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||  ||| |||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31723440 gacagcaacaataacaacttgcatcataacaacattaacaacaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 31723341  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaac 209  Q
    |||||||| |||||||  |||| |||||||||||||||||||||||||||  |  || ||| | |||| ||||||||| ||||||||||||| |||||||    
T  31723340 atgtatctcaaattatttaacaacaatattcatattaattcagactcactgaaatactatacatttataaacaacttcaattcctaccccaaagaccaac 31723241  T
Q  210 tcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    || |||| |||||||||| |||||||| ||||| |||||  ||||  | |||||| |||||||||    
T  31723240 tcagaacatcacgtgcgacaaagatcgcaagaacactaagtaaggccgtctgccactgagtaact 31723176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 282 - 487
Target Start/End: Complemental strand, 23900319 - 23900113
Alignment:
Q  282 agcgatgaagatgatcacc-gcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactca 380  Q
    ||||||||||||||||||  |||||||||||  || ||||||||||||||||||||||||||||| | |||||||| |||||||||||||  || |||||    
T  23900319 agcgatgaagatgatcacttgcgaggcgagagaagctactcgctatggcgagcgatgaatgtcagctttacgggcataatgcagttttcacaaaaactca 23900220  T
Q  381 cctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttcta 480  Q
    ||||||||||| | ||||||||||||||||| | ||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||| |||||| |||    
T  23900219 cctaattccatgattctaaccttaaaactgactgtaatcattgctctatgaataatctaaggtctggacactatttctacatcaattcaacagattccta 23900120  T
Q  481 ctcttaa 487  Q
    |||||||    
T  23900119 ctcttaa 23900113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 10 - 275
Target Start/End: Original strand, 22244623 - 22244889
Alignment:
Q  10 gacatcaaca-ataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataat 107  Q
    |||||||||| | ||||||| |||| |||| ||||||||| | || |||||||| ||||| ||||| ||||||| |||||||||||| | |  |||||||    
T  22244623 gacatcaacataaaacaacttgcaacatagaaacattaataataacaacttgaaagatataaacaataatattttctatatcatacattttcaacataat 22244722  T
Q  108 atatgtatcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggacca 207  Q
    ||||||| ||||| ||| |||||| || || |||| ||||||||||||||||  || ||||||||||||| |||||||| |||||||||||||| |||||    
T  22244723 atatgtagcttaa-ttaaccaacaacattaatcattttaattcagactcactgaaccacaatataattataaacaactttcattcctaccccaaagacca 22244821  T
Q  208 actcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaactt 275  Q
    |||| |||| |||||||||| |||||||| |||||  |||||||||||||||||||| ||||||||||    
T  22244822 actcagaacatcacgtgcgacaaagatcgcaagaaccctaaacaaggttgactgccactgagtaactt 22244889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 10 - 182
Target Start/End: Complemental strand, 36728156 - 36727984
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||| ||||| |||  ||| |||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36728156 gacaacaacaatagcaacttgcatcataacaacattaacaacaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 36728057  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaaca 182  Q
    |||||||| ||||||| ||||| |||||||||||||||||||||||||||| |  |||||| |||||| ||||    
T  36728056 atgtatctcaaattattcaacaacaatattcatattaattcagactcactaaaagacaatacaattataaaca 36727984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 22 - 270
Target Start/End: Original strand, 23947433 - 23947680
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||| |||||||||||||| | || |||||||||||||| ||||| ||||||| |||||||||||| | | ||||||||||||||| || ||    
T  23947433 aacaacttgcaacatagcaacattaataataacaacttgaatgatataaacaataatattttctatatcatacatt-tccacataatatatgtagctcaa 23947531  T
Q  121 attatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtca 220  Q
     ||| |||| | || || |||| ||||||||||||||||  || ||||||||||||| |||||||| |||||||||||||| ||||||||| || | |||    
T  23947532 -ttaaccaaaaacattaatcattttaattcagactcactgaaccacaatataattataaacaactttcattcctaccccaaagaccaactctgagcatca 23947630  T
Q  221 cgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagt 270  Q
    ||||||| |||||||  |||||  |||||||||||||||||||| |||||    
T  23947631 cgtgcgacaaagatcccaagaaccctaaacaaggttgactgccactgagt 23947680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 282 - 487
Target Start/End: Complemental strand, 17907182 - 17906974
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaaga-ctc 379  Q
    |||||||||||| ||||| ||||||| ||||  || |||||||||||||| |||||||||||||| ||   ||||||||| ||||||||| ||| | |||    
T  17907182 agcgatgaagatcatcacgcgcgaggagagagaagctactcgctatggcgggcgatgaatgtcagctc---gggcagaatacagttttcaccaaaaactc 17907086  T
Q  380 acctaatt----ccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagat 475  Q
    ||||||||    ||||   |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| |||||    
T  17907085 acctaattaattccatgcttctaaccttaaaactgattctaatcattgttctatggataatctaaggtctggacactatttctacatcaattcaacagat 17906986  T
Q  476 ttctactcttaa 487  Q
    | | ||||||||    
T  17906985 tcccactcttaa 17906974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 21 - 159
Target Start/End: Complemental strand, 31723619 - 31723481
Alignment:
Q  21 taacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaa 120  Q
    |||||||| |||  ||| |||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  31723619 taacaacttgcatcataacaacattaacagcaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcagataatatatgtatctcaa 31723520  T
Q  121 attatccaacatcaatattcatattaattcagactcact 159  Q
    ||||| ||||| ||||||||||||||||||| |||||||    
T  31723519 attattcaacaacaatattcatattaattcatactcact 31723481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 5760800 - 5760921
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||  ||| ||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5760800 gacaacaacaataacaacttgcatcataacaatattaaccacaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 5760899  T
Q  110 atgtatcttaaattatccaaca 131  Q
    |||||||| |||||||||||||    
T  5760900 atgtatctcaaattatccaaca 5760921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 282 - 487
Target Start/End: Original strand, 22254498 - 22254700
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaaga-ctc 379  Q
    |||||||||| | ||||| ||||||||||| |||| ||||||||| ||||||||||||||||||| ||   |||||||||||||||||   ||| | |||    
T  22254498 agcgatgaagttcatcactcgcgaggcgaggacagctactcgctaaggcgagcgatgaatgtcagctc---gggcagaatgcagtttttctcaaaaactc 22254594  T
Q  380 acctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttct 479  Q
    ||| ||||||||   |  |||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||| |||| ||| || ||    
T  22254595 acccaattccatggtt--aaccttaaaactgattctaatcattgttctatgaatagtctaaggtctggacactatttctacatcagttcaacaggttcct 22254692  T
Q  480 actcttaa 487  Q
    ||||||||    
T  22254693 actcttaa 22254700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 99 - 274
Target Start/End: Complemental strand, 36727896 - 36727721
Alignment:
Q  99 tcacataatatatgtatcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccc 198  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||  |  || ||| | |||| ||||||||||||||||||||    
T  36727896 tcacataatatatgtatctcaaattattcaacaacaatattcatattaattcagactcactgaaagactatacatttataaacaacttccattcctaccc 36727797  T
Q  199 caaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    ||| ||| |||||  ||| |||||||||| |||||||| ||||| |||||  |||| |||||| || |||||||||    
T  36727796 caaagacaaactcataacatcacgtgcgacaaagatcgcaagaacactaagtaaggctgactgtcactgagtaact 36727721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 300 - 487
Target Start/End: Original strand, 17218442 - 17218627
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagtttt-caacaagactcacctaattccataactcta 398  Q
    |||||||||||| ||| ||||||||||||| ||||||||||||||| ||   ||||||||||||||||| |   || ||||||  ||||||||   ||||    
T  17218442 cgcgaggcgagatcagctactcgctatggcaagcgatgaatgtcagctc---gggcagaatgcagtttttcttaaaaactcactcaattccatggttcta 17218538  T
Q  399 accttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    | ||||||||| ||||||||||||||||| ||||||  ||||||||| |||||||||||| |||||||||| ||| || ||||||||||    
T  17218539 atcttaaaactaattctaatcattgttctgtgaatagtctaaggtctggacactatttctgcatcaattcaacaggttcctactcttaa 17218627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 327 - 487
Target Start/End: Original strand, 23948031 - 23948189
Alignment:
Q  327 ggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagact-cacctaattccataactctaaccttaaaactgattctaatcattgtt 425  Q
    ||||||||||||||||||| ||   |||||||||||||||||   ||| | | |||||||||||||   ||||||||||||||  |||||||||||||||    
T  23948031 ggcgagcgatgaatgtcagctc---gggcagaatgcagtttttctcaaaaattcacctaattccatggttctaaccttaaaacatattctaatcattgtt 23948127  T
Q  426 ctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    |||||||||  ||||||||| ||||||||||||||||||||||| ||| || ||||||||||    
T  23948128 ctatgaatagtctaaggtctggacactatttctacatcaattcaacaggttcctactcttaa 23948189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 300 - 487
Target Start/End: Original strand, 23419183 - 23419368
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaat-gcagttttcaacaagactcacctaattccataactcta 398  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||   ||||||||| |||  |||   |||  |||| | ||||| ||   ||||    
T  23419183 cgcgaggcgagatcagttactcgctatggcgagcgatgaatgtcagctc---gggcagaattgcatattttctcaaagctcatccaattcaatggttcta 23419279  T
Q  399 accttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| ||||| | ||||||||||||| | ||  |||||||||||||    
T  23419280 accttaaaactgattctaatcattgttctatgaatagtctaaggtctggacacaaattctacatcaatttaacatgtttctactcttaa 23419368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 282 - 363
Target Start/End: Complemental strand, 45470673 - 45470591
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgca 363  Q
    |||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45470673 agcgatgaagatgatcactcgcgagttgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgca 45470591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 22 - 274
Target Start/End: Complemental strand, 17907788 - 17907535
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||| |||||||||||||| | |  ||||||||||||||||||||||||| ||||||||||||||  | | |||||||||||||||| | |     
T  17907788 aacaacttgcaacatagcaacattaataatatcaacttgaatgatatgaacaacaatattttctatatcatactttttccacataatatatgtatttcac 17907689  T
Q  121 attatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtca 220  Q
    |||| |||||| || || |||| |||||| ||| |||||  |   | |||   |||| ||||||||||||| ||||||||| |||||||||  ||| |||    
T  17907688 attaaccaacaacattaatcattttaatttagattcactgaaaggctatacctttataaacaacttccatttctaccccaaagaccaactcataacatca 17907589  T
Q  221 cgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
     ||| || |||||||| |||||  ||||  |||| ||||||||| |||||||||    
T  17907588 ggtgtgacaaagatcgcaagaactctaactaaggctgactgccactgagtaact 17907535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 282 - 467
Target Start/End: Original strand, 19699883 - 19700067
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcag-ttttcaacaagactc 379  Q
    |||||||||| | ||||| ||||||||||  |||| ||||||||||||||| ||||||||||||| ||   ||||||||||||  |||||   || ||||    
T  19699883 agcgatgaagttcatcactcgcgaggcgaagacagctactcgctatggcgaacgatgaatgtcagctc---gggcagaatgcaaattttctcaaaaactc 19699979  T
Q  380 acctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaatt 467  Q
    | | |||| |||   ||||||||||||||||||||||||||||||||||||||||  ||||||||| | ||||| |||||||||||||    
T  19699980 atccaatttcatggttctaaccttaaaactgattctaatcattgttctatgaatattctaaggtctggtcactaattctacatcaatt 19700067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 119 - 271
Target Start/End: Original strand, 9491 - 9642
Alignment:
Q  119 aaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgt 218  Q
    ||||||| ||||| || ||| |||| | |||||||||||||  || |||||||| |||| |||||||| ||||||||||| || ||| ||||| |||| |    
T  9491 aaattattcaacaacattatccatactgattcagactcactgaactacaatatagttataaacaactttcattcctaccctaacgactaactcagaacat 9590  T
Q  219 cacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagta 271  Q
    || ||||| | ||||||| |||||  |||||||||||||||||||| ||||||    
T  9591 catgtgcg-acaagatcgcaagaaccctaaacaaggttgactgccactgagta 9642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 21346127 - 21346063
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  21346127 atgaacaacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaaca 21346063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 326 - 500
Target Start/End: Complemental strand, 22318197 - 22318023
Alignment:
Q  326 tggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaaga-ctcacctaattccataactctaaccttaaaactgattctaatcattgt 424  Q
    |||||||||||||   || |||||||||||||||  ||| ||||| ||| | ||| || |||| |||| |||||||| |||||||||||||||||||| |    
T  22318197 tggcgagcgatgacgatctgttctacgggcagaacacagatttcagcaaaatctc-ccaaatttcatatctctaaccctaaaactgattctaatcatttt 22318099  T
Q  425 tctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaaatcaaccaattac 500  Q
     |||||||||| ||||||| |  || || ||||||||||||||||  | | ||||||| ||||| |||||||||||    
T  22318098 actatgaataatctaaggtttgaactctgtttctacatcaattcaaaaaaattctactattaaaccaaccaattac 22318023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 395 - 467
Target Start/End: Original strand, 18761284 - 18761356
Alignment:
Q  395 tctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaatt 467  Q
    |||||||| |||||||||||||| | ||||||||||||||  ||||||||| |||||||||||||||||||||    
T  18761284 tctaacctcaaaactgattctaaactttgttctatgaatagtctaaggtctggacactatttctacatcaatt 18761356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 23914248 - 23914312
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  23914248 atgaacaacattatttctatatcatacaacattcacataatatatgtatctcaaattattcaaca 23914312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 6102517 - 6102462
Alignment:
Q  70 aacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattat 125  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  6102517 aacaacattatttctatatcatacaatattcacataatatatgtatctcaaattat 6102462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 211
Target Start/End: Complemental strand, 22584554 - 22584363
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||| |||||||||||||| | ||  ||||||||||||| |||||| ||| |||| |||||||||| | ||||||||||||||||| ||||     
T  22584554 aacaacttgcaacatagcaacattaataataaccacttgaatgatataaacaacgatattttcaatatcatacatttttcacataatatatgtagcttag 22584455  T
Q  121 attatccaacatcaat-attcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||| |||||| || | |  ||||||| || ||| |||||  |  || |||   |||| |||||||||||||||||||||||  ||||||||    
T  22584454 attaaccaacaacattaaaccatattagtttagattcactgaaagactatacctttataaacaacttccattcctaccccaaataccaactc 22584363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 159
Target Start/End: Original strand, 23888957 - 23889095
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatat-ttctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||| | ||| |||||||| | || |||||||| ||||| ||||||||||| |||||||||||||| | | ||||||||||||||| || ||    
T  23888957 aacaacttgcaacacagctacattaataataacaacttgaacgatataaacaacaatatcttctatatcatacattttccacataatatatgtagctcaa 23889056  T
Q  121 attatccaacatcaatattcatattaattcagactcact 159  Q
    |||| |||||| || || |||||||| || ||| |||||    
T  23889057 attaaccaacaacattaatcatattagtttagattcact 23889095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 70 - 144
Target Start/End: Complemental strand, 20084402 - 20084328
Alignment:
Q  70 aacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatat 144  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||| || ||||||| |||||  || ||||||||    
T  20084402 aacaacattatttttatatcatacaatattcacataatatatgtacctcaaattattcaacaagaacattcatat 20084328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 274
Target Start/End: Original strand, 17217978 - 17218073
Alignment:
Q  179 aacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    |||||||||||||||||||| || |||||||||  ||| |||||||||| |||||||| |||||  ||||  ||||  |||||||| |||||||||    
T  17217978 aacaacttccattcctacccgaaagaccaactcataacatcacgtgcgataaagatcgaaagaaccctaagtaaggccgactgccactgagtaact 17218073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 445
Target Start/End: Complemental strand, 13661090 - 13661021
Alignment:
Q  376 actcacctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtct 445  Q
    ||||| ||||||||||   |||||||||||||||||||||||| |||||| ||||||| | |||||||||    
T  13661090 actcatctaattccatggttctaaccttaaaactgattctaataattgttatatgaattatctaaggtct 13661021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 445
Target Start/End: Complemental strand, 13719733 - 13719664
Alignment:
Q  376 actcacctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtct 445  Q
    ||||| ||||||||||   |||||||||||||||||||||||| |||||| ||||||| | |||||||||    
T  13719733 actcatctaattccatggttctaaccttaaaactgattctaataattgttatatgaattatctaaggtct 13719664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 179 - 264
Target Start/End: Original strand, 19699458 - 19699542
Alignment:
Q  179 aacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgcca 264  Q
    ||||||||||||||||| || ||| | ||||||  ||| |||||||||| |||||||| |||||  ||||||||||||||||||||    
T  19699458 aacaacttccattcctatcctaag-atcaactcacaacatcacgtgcgacaaagatcgcaagaaccctaaacaaggttgactgcca 19699542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 23450837 - 23450879
Alignment:
Q  169 tataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||||| || |||||||||||||||||||||||||||||||||    
T  23450837 tataatcattaacaacttccattcctaccccaaggaccaactc 23450879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 34301915 - 34301957
Alignment:
Q  169 tataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||||| || |||||||||||||||||||||||||||||||||    
T  34301915 tataatcattaacaacttccattcctaccccaaggaccaactc 34301957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 469
Target Start/End: Original strand, 37516368 - 37516517
Alignment:
Q  318 actcgctatggcgagcgatgaatgtcagttctacgggcagaatgcag-ttttcaacaagactcacctaattccataactctaaccttaaaactgattcta 416  Q
    |||||||||||||||||||||||||||| |   |||||||||||||| |||||  | ||| ||| | |||  |||   |||||||||||||||||||  |    
T  37516368 actcgctatggcgagcgatgaatgtcagct---cgggcagaatgcagattttctcctagaatcatccaatctcatgtttctaaccttaaaactgatttca 37516464  T
Q  417 atcattgttctatgaataacctaaggtctagacactatttctacatcaattca 469  Q
    || ||  | ||||| || | |||||||||  |||| |||||||||||||||||    
T  37516465 attatcatcctatggattatctaaggtctgtacacaatttctacatcaattca 37516517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 17217821 - 17217913
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgta 114  Q
    ||||||| |||| |||||||||||||| | || |||||  ||||||| ||||||| ||||| |||||||||||| | | |||||||||||||||    
T  17217821 aacaacttgcaacatagcaacattaataataacaacttagatgatat-aacaacattattttctatatcatacactttccacataatatatgta 17217913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 36727961 - 36727896
Alignment:
Q  15 caacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatat 80  Q
    |||||||||||||| |||  ||| |||||||||   ||| ||||||||||||||||||||||||||    
T  36727961 caacaataacaacttgcatcataacaacattaacagcaacaacttgaatgatatgaacaacaatat 36727896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 274
Target Start/End: Complemental strand, 23900726 - 23900670
Alignment:
Q  218 tcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    |||||||||| |||||||| ||||| |||||  |||||||||||||| |||||||||    
T  23900726 tcacgtgcgacaaagatcgcaagaacactaagtaaggttgactgccactgagtaact 23900670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 14103120 - 14103065
Alignment:
Q  181 caacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcg 236  Q
    |||| ||||||||||||||||||| ||||||| ||| || ||||||| ||||||||    
T  14103120 caacctccattcctaccccaaggatcaactcgtaacatctcgtgcgacaaagatcg 14103065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 469
Target Start/End: Complemental strand, 19928974 - 19928900
Alignment:
Q  395 tctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattca 469  Q
    |||||||||||||||||||| ||| ||  ||||||| || | |||||||||  ||||  ||||||||||||||||    
T  19928974 tctaaccttaaaactgattccaattatcattctatggattatctaaggtctgtacacagtttctacatcaattca 19928900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 22253061 - 22253000
Alignment:
Q  181 caacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaa 242  Q
    |||| ||||||||||||||||||  ||||||  ||| |||||||||| |||||||| |||||    
T  22253061 caacctccattcctaccccaagggtcaactcataacatcacgtgcgacaaagatcgcaagaa 22253000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 24495949 - 24495986
Alignment:
Q  169 tataattatgaacaacttccattcctaccccaaggacc 206  Q
    |||||| || ||||||||||||||||||||||||||||    
T  24495949 tataatcattaacaacttccattcctaccccaaggacc 24495986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 257
Target Start/End: Complemental strand, 22963315 - 22963240
Alignment:
Q  181 caacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttg 257  Q
    |||||||||||||||||||||||  ||||||  ||| || ||||||| |||||||| || ||  |||||||||||||    
T  22963315 caacttccattcctaccccaagggtcaactcataacatctcgtgcgacaaagatcgcaa-aatcctaaacaaggttg 22963240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 184; Significance: 2e-99; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 13133193 - 13132934
Alignment:
Q  15 caacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgta 114  Q
    |||||||||||||| |||  ||| |||||||||  |||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  13133193 caacaataacaacttgcatcataacaacattaacaacaacaacttgaatgatatgaacaacaatatttatataccatacaatattcacataatatatgta 13133094  T
Q  115 tcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcgga 214  Q
    ||| ||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  13133093 tctcaaattattcaacaacgatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggatcaactcaga 13132994  T
Q  215 acgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    |||||||||||||||||||||| ||||| |||||| |||||||||||||| |||||||||    
T  13132993 acgtcacgtgcgaaaaagatcgcaagaacactaaaaaaggttgactgccactgagtaact 13132934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 290 - 500
Target Start/End: Complemental strand, 48807649 - 48807438
Alignment:
Q  290 agatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactcacctaattc 388  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  48807649 agatgatcactcgcgaggcgaggacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaaaactcacctaattc 48807550  T
Q  389 cataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaaa 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||    
T  48807549 cataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctggatactatttctacatcaattcaacagatttctactcttaaa 48807450  T
Q  489 tcaaccaattac 500  Q
    ||||||||||||    
T  48807449 tcaaccaattac 48807438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 38 - 274
Target Start/End: Complemental strand, 48809332 - 48809097
Alignment:
Q  38 gcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaata 137  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||| ||||||||||||    
T  48809332 gcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacatcatatatgtgtctcaaattacccaacatcaata 48809233  T
Q  138 ttcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgt 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||| ||||||||| |||||||||     
T  48809232 ttcatattaattcagactcactacacaacaatataattatgaacaacttctattcctaccccaatgaccaactcagaacatcacgtgcg-aaaagatcgc 48809134  T
Q  238 aagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    ||||| ||||||||||||||||| ||| |||||||||    
T  48809133 aagaacactaaacaaggttgactaccactgagtaact 48809097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 10 - 274
Target Start/End: Complemental strand, 15096516 - 15096252
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||| ||| |||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15096516 gacagcaacaataacaacttgcaacataacaacattaacaacaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 15096417  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaac 209  Q
    |||||||| ||||||||||||| ||| ||||||||||||||| |||||||  |  |||||| |||||| |||||||| ||||||||||||||||||||||    
T  15096416 atgtatctcaaattatccaacaacaacattcatattaattcaaactcactgaaagacaatacaattataaacaactttcattcctaccccaaggaccaac 15096317  T
Q  210 tcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    |  ||||||||||||||| |||||||| ||||| | |||| |||||||||||||| |||||||||    
T  15096316 taagaacgtcacgtgcgacaaagatcgcaagaacattaaataaggttgactgccactgagtaact 15096252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 10 - 274
Target Start/End: Complemental strand, 19558156 - 19557892
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||| ||| |||||| ||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19558156 gacaacaacaataacaacttgcaacataacaacatcaataacaacaacttgaatgatatgaacaactatatttctatatcatacaatattcacataatat 19558057  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaac 209  Q
    |||||||| ||||||||||||| ||| ||||||||||||| ||||||||   |||||||||||||||| |||||||| ||||| |||||||| |||||||    
T  19558056 atgtatctcaaattatccaacaacaacattcatattaatttagactcacggaacaacaatataattataaacaactttcattcttaccccaaagaccaac 19557957  T
Q  210 tcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    || |||||| ||||||||||||||||| |||||  |||||||| | ||||||||| |||||||||    
T  19557956 tcagaacgttacgtgcgaaaaagatcgcaagaaccctaaacaatgctgactgccactgagtaact 19557892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 14219839 - 14219580
Alignment:
Q  15 caacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgta 114  Q
    |||||||||||||| |||| ||| |||||  ||  |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14219839 caacaataacaacttgcaacataacaacaccaacaacaacaacttgaatgatatgaacaacaatacttctatatcatacaatattcacataatatatgta 14219740  T
Q  115 tcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcgga 214  Q
    ||| ||||||||||||| ||| |||||||||||||||||||||||  ||||||||||| |||| |||||||| |||||||||||||| |||||| || ||    
T  14219739 tctcaaattatccaacaacaacattcatattaattcagactcactgaacaacaatatatttataaacaactttcattcctaccccaaagaccaagtcaga 14219640  T
Q  215 acgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    |||| ||||| || | |||||| |||||  |||||||||||||||||||| |||||||||    
T  14219639 acgttacgtgtgacagagatcgcaagaaccctaaacaaggttgactgccactgagtaact 14219580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 300 - 498
Target Start/End: Original strand, 16078072 - 16078269
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactcacctaattccataactctaa 399  Q
    |||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||||||||||||||  ||||    
T  16078072 cgcgaggcgagaacatatactcgctatggcgagcgatgaatgttagttctacgggcagaatgcaattt-caacaaaactcacctaattccataatcctaa 16078170  T
Q  400 ccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaaatcaaccaatt 498  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  16078171 ccttaaaactgattctaatcattgttctatgaataacctaaggtctgaacactatttctgcatcaattcaacagatttctactcttaaatcaaccaatt 16078269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 55 - 274
Target Start/End: Original strand, 16077587 - 16077806
Alignment:
Q  55 aacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaattcagac 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| ||| ||||||||||||||| ||    
T  16077587 aacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatacatgtatttcaaattatccaacaacaacattcatattaattcaaac 16077686  T
Q  155 tcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaagg 254  Q
    |||||  |||||||||| ||||| |||||||| |||||||||| |||  |||||||| |||||||||||||||||||||||  ||||| |||||||||||    
T  16077687 tcactgaacaacaatatgattataaacaactttcattcctaccacaaataccaactcagaacgtcacgtgcgaaaaagatctcaagaacactaaacaagg 16077786  T
Q  255 ttgactgccagtgagtaact 274  Q
    |||||||||| |||||||||    
T  16077787 ttgactgccactgagtaact 16077806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 286 - 498
Target Start/End: Complemental strand, 14219224 - 14219011
Alignment:
Q  286 atgaagatgatcacc-gcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactcaccta 384  Q
    |||||||| |||||| | |||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||   || | |||||||    
T  14219224 atgaagattatcacccgtgaggtgagagcagttactcgctatggcgagcgatgaatgtcagctctacgggcagaatgaagttttcccaaaaattcaccta 14219125  T
Q  385 attccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactct 484  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  14219124 attccataactctaaccttaaaactgattctaatcattgttctatgaataatctaaggtctggacactatttctacatcaattcaacagatttctactct 14219025  T
Q  485 taaatcaaccaatt 498  Q
    ||||| || |||||    
T  14219024 taaattaatcaatt 14219011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 300 - 500
Target Start/End: Complemental strand, 13132633 - 13132433
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactcacctaattccataactctaa 399  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||  || ||||||||||||| | ||||||||    
T  13132633 cgcgaggcgagaacagttactcgctatggcgagcgacgaatgtcagctctacgggcagaatgcagttttcacaaaaactcacctaattctacaactctaa 13132534  T
Q  400 ccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaaatcaaccaatta 499  Q
    ||||||||||||||||||||||||||| |||||||| ||| ||| | |||||| |||||||||||||||| |||||||||||||||||||||||| ||||    
T  13132533 ccttaaaactgattctaatcattgttcaatgaataatctacggtatggacactgtttctacatcaattcaacagatttctactcttaaatcaaccgatta 13132434  T
Q  500 c 500  Q
    |    
T  13132433 c 13132433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 10 - 274
Target Start/End: Original strand, 15139343 - 15139608
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcac-aataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataata 108  Q
    |||| |||||||||||||| |||| ||| ||||||||| ||| || ||||||| |||||| ||||||||||||||||||||||||||| |||||||||||    
T  15139343 gacaacaacaataacaacttgcaacataacaacattaa-cactaacaacttgattgatataaacaacaatatttctatatcatacaatgttcacataata 15139441  T
Q  109 tatgtatcttaaattatccaacatcaatatt-catattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggacca 207  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||||||||  |  |||||| ||||||  ||||||| ||||||||||||||  ||||    
T  15139442 tatgtatctcaaattatccaacaacaatatttcatattaattcagactcactgaaagacaatacaattatagacaactttcattcctaccccaaaaacca 15139541  T
Q  208 actcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    |||| ||||||||||||||| |||||||| ||||  ||||||||||||||||||||| |||||||||    
T  15139542 actcagaacgtcacgtgcgacaaagatcgcaagagcactaaacaaggttgactgccactgagtaact 15139608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 284 - 487
Target Start/End: Original strand, 4071542 - 4071746
Alignment:
Q  284 cgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactcacc 382  Q
    |||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||    || |||||||    
T  4071542 cgatgaagatgatcactcgcgaggcgaggacagctactcgctatggcgagcgatgaatgtcagctctacgggcagagtgcagttttttcaaaaactcacc 4071641  T
Q  383 taattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctact 482  Q
    ||||||||| | ||||||||||||| |||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||    
T  4071642 taattccatgattctaaccttaaaattgattccaatcattgttctatgaataatctaaggtctggacactatttctacatcaattcaacagattcctact 4071741  T
Q  483 cttaa 487  Q
    |||||    
T  4071742 cttaa 4071746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 10 - 159
Target Start/End: Complemental strand, 13133388 - 13133239
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||  ||| |||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13133388 gacaacaacaataacaacttgcatcataacaacattaacagcaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 13133289  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcact 159  Q
    |||||||| ||||||| || || |||||||||||||||||||||||||||    
T  13133288 atgtatctcaaattattcagcaacaatattcatattaattcagactcact 13133239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 300 - 487
Target Start/End: Original strand, 15288845 - 15289030
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaaga-ctcacctaattccataactcta 398  Q
    |||||||||||| || ||||||||||||| |||||||||||||||| ||    ||||||||||||||||   ||| | |||||| ||||||||   ||||    
T  15288845 cgcgaggcgagatcaattactcgctatggtgagcgatgaatgtcagctca---ggcagaatgcagtttttctcaaaaactcacccaattccatggttcta 15288941  T
Q  399 accttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| ||| || ||||||||||    
T  15288942 accttaaaactgattctaatcattgttctatgaatattctaaggtctggacactatttctacatcaattcaacaggttcctactcttaa 15289030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 315 - 500
Target Start/End: Original strand, 15139968 - 15140153
Alignment:
Q  315 gttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactcacctaattccataactctaaccttaaaactgattc 414  Q
    ||||||||||||||||||||||||   ||   |||| ||||| ||  ||| ||||| ||| |||||||||||||||||||||||||| ||||||||||||    
T  15139968 gttactcgctatggcgagcgatgacgatctactctatgggcataacacagatttcagcaaaactcacctaattccataactctaaccctaaaactgattc 15140067  T
Q  415 taatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaaatcaaccaattac 500  Q
    |||| ||||| ||| |||||| |||||||||  ||| | ||||||||||| |||| |||||||||||| |||||||||||||||||    
T  15140068 taattattgtactaagaataatctaaggtctgaacagtgtttctacatcagttcaacagatttctactattaaatcaaccaattac 15140153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 300 - 500
Target Start/End: Complemental strand, 15095949 - 15095749
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactcacctaattccataactctaa 399  Q
    ||||||||||| |  | ||||||||||||||||||||||   || | |||||||||||||  ||| ||||| ||| |||| || ||||||||| | | ||    
T  15095949 cgcgaggcgagcaaggatactcgctatggcgagcgatgacgatctgctctacgggcagaacacaggtttcagcaaaactctcccaattccatatcccaaa 15095850  T
Q  400 ccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaaatcaaccaatta 499  Q
    || |||||||||||||||||||||| |||||||||| | |||||||  ||||| |||||||||||||||| |||||||||||| |||||||||| |||||    
T  15095849 ccctaaaactgattctaatcattgtactatgaataatcaaaggtctgaacactgtttctacatcaattcaacagatttctactattaaatcaactaatta 15095750  T
Q  500 c 500  Q
    |    
T  15095749 c 15095749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 282 - 498
Target Start/End: Complemental strand, 35771774 - 35771557
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactc- 379  Q
    |||||||||||| ||||| | ||||||||||  ||||||||||||||  |||||||||   || | |||||||||||||  ||||||| | ||| | ||     
T  35771774 agcgatgaagatcatcactcacgaggcgagaggagttactcgctatgatgagcgatgacgatctgctctacgggcagaacacagtttt-agcaaaaatcc 35771676  T
Q  380 acctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttct 479  Q
    | |||||||||||||||||||||||||||||||||||||  |||||||||||||||  |||||||  |||||||||||||| |||||||| || ||| ||    
T  35771675 atctaattccataactctaaccttaaaactgattctaatgtttgttctatgaataatttaaggtcaggacactatttctacgtcaattcaacatattcct 35771576  T
Q  480 actcttaaatcaaccaatt 498  Q
    |||||||||| || |||||    
T  35771575 actcttaaattaatcaatt 35771557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 1490056 - 1489935
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||  ||| ||| |||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1490056 gacaacaacaataacaacttgcatcataacaatattaacaacaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 1489957  T
Q  110 atgtatcttaaattatccaaca 131  Q
    |||||| | |||||||||||||    
T  1489956 atgtatatcaaattatccaaca 1489935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 50 - 274
Target Start/End: Complemental strand, 22001054 - 22000832
Alignment:
Q  50 acaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaatt 149  Q
    |||| ||||||||||||||||||||||||||||| | | |||| ||||||||||||||||||||||   ||||||||||||| || |||||||| |||||    
T  22001054 acaaaaacttgaatgatatgaacaacaatatttccacaacatataatattcacataatatatgtattccaaattatccaacaacagtattcataataatt 22000955  T
Q  150 -cagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaa 248  Q
     ||||||||||  |   ||| | |||||| | |||||| ||||||||||||||  |||||||| |||   | ||||||| ||||  || || || |||||    
T  22000954 acagactcactgtaaggcaacacaattataagcaactttcattcctaccccaataaccaactctgaa---ctcgtgcgacaaaggacgcaaaaacactaa 22000858  T
Q  249 acaaggttgactgccagtgagtaact 274  Q
    |||||||||||||||| |||||||||    
T  22000857 acaaggttgactgccactgagtaact 22000832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 11053866 - 11054053
Alignment:
Q  25 aactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaatt 123  Q
    |||| ||||||||||||||||||| | || |||||||||||||| |||||||||| ||||||||||||||| | | ||||||||||||||| || |||||    
T  11053866 aacttgcaatatagcaacattaataataacaacttgaatgatataaacaacaatattttctatatcatacattttccacataatatatgtagctcaaatt 11053965  T
Q  124 atccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    | |||||| || || |||||||| || ||| |||||  |  || |||   |||| |||||||| |||||||||||||| |||||||||    
T  11053966 aaccaacaacattagtcatattagtttagattcactggaagactatacctttataaacaactttcattcctaccccaaagaccaactc 11054053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 300 - 487
Target Start/End: Complemental strand, 10659162 - 10658977
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcag-ttttcaacaagactcacctaattccataactcta 398  Q
    |||||||||||   || ||||||||||||||||||||||||||||||||   ||||||||||||  |||||   || ||||| | ||||||||   || |    
T  10659162 cgcgaggcgagggtagctactcgctatggcgagcgatgaatgtcagttc---gggcagaatgcatattttctcaaaaactcatccaattccatggttcaa 10659066  T
Q  399 accttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    ||||||||||| ||| | ||||||||||||||||||  |||||||||  |||||| ||||||||||||| | ||| |||||||||||||    
T  10659065 accttaaaactaattatgatcattgttctatgaatagtctaaggtctgaacactaattctacatcaatttaacaggtttctactcttaa 10658977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 50 - 243
Target Start/End: Complemental strand, 8135912 - 8135719
Alignment:
Q  50 acaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaatt 149  Q
    |||| ||||||||| ||||||| |||||||  | || | ||| |||| | |||||||||  ||||| | || |||||||||| |||||||||||||||||    
T  8135912 acaacaacttgaataatatgaataacaataaatatacaacatgcaatctccacataataggtgtatttcaatttatccaacaacaatattcatattaatt 8135813  T
Q  150 cagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaa 243  Q
    || |||||||  |  |||||| ||||||  ||||||| |||||||||||||| | ||||||| ||||| ||| ||||| ||||| || ||||||    
T  8135812 catactcactgtaagacaatacaattatatacaactttcattcctaccccaaagtccaactcagaacgacacatgcgacaaagaacgcaagaaa 8135719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 300 - 500
Target Start/End: Complemental strand, 8135549 - 8135349
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactcacctaattccataactctaa 399  Q
    |||||||||||||   |||||||| ||||||||||||||   || |||||||||||||||  ||| ||||||||| |   ||| |||| |||| | | ||    
T  8135549 cgcgaggcgagaaggattactcgcaatggcgagcgatgaggatctgttctacgggcagaacacagatttcaacaaaaactaccaaatttcatatcccaaa 8135450  T
Q  400 ccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaaatcaaccaatta 499  Q
    || ||||||||||| ||| ||||   |||||||||| ||| |||||  |||||| ||||||||||||||| || ||||  ||| ||||||||||||||||    
T  8135449 ccctaaaactgattataaacattacactatgaataatctagggtctgaacactaattctacatcaattcaacatattttcactattaaatcaaccaatta 8135350  T
Q  500 c 500  Q
    |    
T  8135349 c 8135349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 319 - 487
Target Start/End: Complemental strand, 36704863 - 36704697
Alignment:
Q  319 ctcgctatggcgagcgatgaatgtcagttctacgggcagaat-gcagttttcaacaagactcacctaattccataactctaaccttaaaactgattctaa 417  Q
    |||||| |||||||||||||||||||| ||   ||||||||| |||| |||   ||| ||||| | ||||| ||   |||||||||||||||||| ||||    
T  36704863 ctcgctgtggcgagcgatgaatgtcagctc---gggcagaattgcagattttctcaaaactcatccaattcaatggttctaaccttaaaactgatcctaa 36704767  T
Q  418 tcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    ||||||||||||||| |  ||||||||| ||||||| ||||||| ||||| | ||| |||||||||||||    
T  36704766 tcattgttctatgaaaagtctaaggtctggacactaattctacaacaatttaacaggtttctactcttaa 36704697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 14258676 - 14258740
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  14258676 atgaacaacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaaca 14258740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 16460660 - 16460596
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  16460660 atgaacaacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaaca 16460596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 16579984 - 16580048
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  16579984 atgaacaacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaaca 16580048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 16585679 - 16585615
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  16585679 atgaacaacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaaca 16585615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 32301506 - 32301570
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  32301506 atgaacaacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaaca 32301570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 14929097 - 14929026
Alignment:
Q  70 aacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattca 141  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||    
T  14929097 aacaacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaacattca 14929026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 15352563 - 15352492
Alignment:
Q  70 aacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattca 141  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||    
T  15352563 aacaacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaacattca 15352492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 33001194 - 33001302
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||| |||||||| ||||| ||||||||||| ||||||  |||||||  |||| |||||||||||| | |||||||||||||||||||| ||    
T  33001194 aacaacttgcaacatagcaacgttaataacaataacttggatgatac-aacaacataattttctatatcatacatt-ttcacataatatatgtatctcaa 33001291  T
Q  121 attatccaaca 131  Q
    |||||||||||    
T  33001292 attatccaaca 33001302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 274
Target Start/End: Original strand, 4070991 - 4071210
Alignment:
Q  55 aacttgaatgata-tgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaattcaga 153  Q
    ||||||||||||| |||||| |||||| ||||| ||||||||| | | |||||||||||||||| |||||| |||||| || || |||| ||||||||||    
T  4070991 aacttgaatgataatgaacatcaatatctctat-tcatacaatttcctcataatatatgtatctcaaattaaccaacaacattaatcattttaattcaga 4071089  T
Q  154 ctcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaag 253  Q
    ||| ||  |   | |||   |||| |||||||| |||||  ||||||| || ||||||  ||| | |||||||| |||||||| |||||  ||||  |||    
T  4071090 ctctctgaaaggctatacctttataaacaactttcattctcaccccaaagatcaactcataacattacgtgcgacaaagatcgcaagaactctaagtaag 4071189  T
Q  254 gttgactgccagtgagtaact 274  Q
    | |||||||||  ||||||||    
T  4071190 gctgactgccaccgagtaact 4071210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 8757213 - 8757105
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| | || |||||||||||||| |||||| |||||| |||||||||||| | |||||||||||||  |||||||||     
T  8757213 caacttgcaacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacatttttcacataatataaatatcttaaac 8757114  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  8757113 taaccaaca 8757105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 20487767 - 20487831
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  20487767 atgaacaacattatgtctatatcttacaatattcacataatatatgtatctcaaattattcaaca 20487831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 3289641 - 3289531
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||| |||||||| | ||| | || |||| ||||||||| ||||||||||||| |||||||||||| | | ||||||||||||||| ||| |    
T  3289641 aacaacttgcaacatagcaacgtcaataataacaactcgaatgatataaacaacaatattttctatatcatacattttccacataatatatgtagcttga 3289542  T
Q  121 attatccaaca 131  Q
    |||| ||||||    
T  3289541 attaaccaaca 3289531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 271
Target Start/End: Original strand, 15281496 - 15281744
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||| |||||||||||| | | || |||||| ||||||| ||||||| ||||| |||||||||||| | | |||||||||||||||  | ||    
T  15281496 aacaacttgcaacatagcaacatta-taataacaacttggatgatat-aacaacattattttctatatcatacactttccacataatatatgtaattcaa 15281593  T
Q  121 attatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtca 220  Q
    | || |||||| || || |||| | ||||||||||| ||  |   | |||   || | |||||||||||||| || ||||| ||||||||   ||| |||    
T  15281594 aataaccaacaacattaatcatttaaattcagactctctgaaaggctatacctttgtaaacaacttccattcttatcccaaagaccaacttataacatca 15281693  T
Q  221 cgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagta 271  Q
    ||||||| |||||||| |||||| ||||  |||| ||||||||| ||||||    
T  15281694 cgtgcgacaaagatcgcaagaaatctaagtaaggctgactgccactgagta 15281744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 130705 - 130637
Alignment:
Q  187 ccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggt 255  Q
    |||||||||||||||||| ||||||  ||| |||||||||| |||||||| |||||  |||||||||||    
T  130705 ccattcctaccccaaggatcaactcaaaacctcacgtgcgataaagatcgcaagaaccctaaacaaggt 130637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 20253475 - 20253419
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaa-taacttgaatgatatgaacaacaa 77  Q
    ||||||| |||| |||||||||||||||||||  |||||||||||||||||||||||    
T  20253475 aacaacttgcaacatagcaacattaatcacaacaaacttgaatgatatgaacaacaa 20253419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 40555560 - 40555452
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| | || |||||||||||||| |||||| ||| ||||||||||||||| | | || ||||||||  |||||||||     
T  40555560 caacttgcaacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccatataatataaatatcttaaac 40555461  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  40555460 taaccaaca 40555452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 271
Target Start/End: Complemental strand, 36705327 - 36705238
Alignment:
Q  181 caacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagta 271  Q
    ||||||||||| ||||||||| | | ||||   ||| |||||||||| |||||||| |||||  |||||||||||||||||||| ||||||    
T  36705327 caacttccatttctaccccaatgtc-aactatcaacatcacgtgcgacaaagatcgcaagaaccctaaacaaggttgactgccactgagta 36705238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 398 - 467
Target Start/End: Complemental strand, 18074849 - 18074780
Alignment:
Q  398 aaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaatt 467  Q
    |||||||||||| ||||||| | |||||||| |||||  ||||||||  || ||||||||||||||||||    
T  18074849 aaccttaaaactaattctaaactttgttctacgaatagtctaaggtcaggatactatttctacatcaatt 18074780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 480
Target Start/End: Original strand, 11054556 - 11054632
Alignment:
Q  404 aaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttcta 480  Q
    ||||||| ||||||||||||| |||||| ||| |||||||||  ||||| ||||| ||| |||||| ||| ||||||    
T  11054556 aaaactggttctaatcattgtactatgagtaatctaaggtctgaacactgtttcttcattaattcaacaggtttcta 11054632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 12755523 - 12755415
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| |||| || |||||||| || ||||||||| |||| |||||| |||||| |||||||||||| | | ||||| |||||  |||||||||     
T  12755523 caacttgcaacatagaaatattaatcataacaacttgaattatataaacaacgatattttctatatcatacattttccacatgatataaatatcttaaac 12755424  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  12755423 taaccaaca 12755415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 254
Target Start/End: Original strand, 16996404 - 16996519
Alignment:
Q  139 tcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgta 238  Q
    ||||||||  |||||||||||  ||| |||||  ||||| | |||| |||||||||| || ||||  ||||||  ||| |||||||||| |||||||| |    
T  16996404 tcatattatatcagactcactgaacatcaataatattataatcaacctccattcctaacctaagggtcaactcaaaacctcacgtgcgacaaagatcgca 16996503  T
Q  239 agaaaactaaacaagg 254  Q
    ||||  ||||||||||    
T  16996504 agaaccctaaacaagg 16996519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 32434293 - 32434254
Alignment:
Q  92 acaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  32434293 acaatattcacataatatatgtatttcaaattatccaaca 32434254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 211
Target Start/End: Complemental strand, 14191906 - 14191717
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| | ||||| |||||| | || |||||||||||||| |||||| ||| ||||||||||| ||| |   | |||||||||  |||||||||     
T  14191906 caacttgcaacaaagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcacacatttccctcataatatagatatcttaaac 14191807  T
Q  123 tatccaac-atcaatattcatattaa-ttcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    || | ||| |||| || |||| |||| ||||||||| ||  |||||| ||  ||||| |||||||| | || |||||||||||||||||||    
T  14191806 taactaacaatcattaatcatcttaatttcagactctctgaacaacattaatattataaacaactt-cgtttctaccccaaggaccaactc 14191717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 832840 - 832732
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| | || |||||||||||||| || ||| ||| ||||| ||||||||| | | | |||||||||  |||||||||     
T  832840 caacttgcaacatagcaatattaataataacaacttgaatgatataaaaaacgatattttctttatcatacattttcctcataatataaatatcttaaac 832741  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  832740 taaccaaca 832732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 1198020 - 1197912
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| | || |||||||||||||| || ||| ||| ||||| ||||||||| | | | |||||||||  |||||||||     
T  1198020 caacttgcaacatagcaatattaataataacaacttgaatgatataaaaaacgatattttctttatcatacattttcctcataatataaatatcttaaac 1197921  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  1197920 taaccaaca 1197912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 4325291 - 4325399
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| |||| || |||||| | || |||||||||||||  |||||| |||||| |||||||||||| | |  ||||||||||  |||||||||     
T  4325291 caacttgcaacatagaaatattaataataacaacttgaatgataataacaacgatattttctatatcatacattttcaacataatataaatatcttaaac 4325390  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  4325391 taaccaaca 4325399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 13408007 - 13408115
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| | || |||||||||||||   ||||| ||| ||||||||||||||| | | | |||||||||  |||||||||     
T  13408007 caacttgcaacatagcaatattaataataacaacttgaatgataattacaacgatattttctatatcatacattttcctcataatataaatatcttaaac 13408106  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  13408107 taaccaaca 13408115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 14036422 - 14036478
Alignment:
Q  180 acaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcg 236  Q
    ||||| ||||||||||||||||||| ||||||  ||| || ||||||| ||||||||    
T  14036422 acaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcg 14036478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 14044972 - 14045028
Alignment:
Q  180 acaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcg 236  Q
    ||||| ||||||||||||||||||| ||||||  ||| || ||||||| ||||||||    
T  14044972 acaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcg 14045028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 14346452 - 14346508
Alignment:
Q  180 acaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcg 236  Q
    ||||| ||||||||||||||||||| ||||||  ||| || ||||||| ||||||||    
T  14346452 acaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcg 14346508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 14355002 - 14355058
Alignment:
Q  180 acaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcg 236  Q
    ||||| ||||||||||||||||||| ||||||  ||| || ||||||| ||||||||    
T  14355002 acaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcg 14355058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 16091981 - 16092037
Alignment:
Q  180 acaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcg 236  Q
    ||||| ||||||||||||||||||| ||||||  ||| || ||||||| ||||||||    
T  16091981 acaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcg 16092037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 17071119 - 17071035
Alignment:
Q  11 acatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaat-atttctatatcataca 94  Q
    |||||||||  |||| || |||| |||||||||| ||| | || |||||||||||||| ||||| ||| |||| |||||||||||    
T  17071119 acatcaacataaacatcttgcaacatagcaacatcaataataacaacttgaatgatataaacaataataatttttatatcataca 17071035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 47094319 - 47094383
Alignment:
Q  30 gcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcataca 94  Q
    |||| ||||||||||  || |||| |||||||||||||| ||||| |||| || |||||||||||    
T  47094319 gcaacatagcaacatcgataacaacaacttgaatgatataaacaataataattttatatcataca 47094383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 184; Significance: 2e-99; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 35 - 274
Target Start/End: Complemental strand, 17259031 - 17258792
Alignment:
Q  35 atagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatca 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  17259031 atagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatacatgtatcttaaattatctaacatca 17258932  T
Q  135 atattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagat 234  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||| |||||||||    
T  17258931 atattcatattaattcagactcactacaaaactatataattatgaacaacttacattcctaccccaaggaccaactcagaacctcacgtgtgaaaaagat 17258832  T
Q  235 cgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    || ||||| ||||||||| ||||||| ||| || ||||||    
T  17258831 cgcaagaacactaaacaaagttgactaccaatgcgtaact 17258792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 300 - 498
Target Start/End: Original strand, 13185633 - 13185831
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactcacctaattccataactctaa 399  Q
    |||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||    || ||||||||||||||||||||||||    
T  13185633 cgcgaggcgagaacagctactcgctatggcgagtgatgaatgtcagctctacgggcagaatgcagtttttccaaaaactcacctaattccataactctaa 13185732  T
Q  400 ccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaaatcaaccaatt 498  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||  ||||| |||||||||||| || |||||    
T  13185733 ccttaaaactgattctaatcattgttctatgaataatctaaggtctggacactatttctacatcaattcaatagattcctactcttaaattaatcaatt 13185831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 282 - 500
Target Start/End: Original strand, 11563456 - 11563664
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactca 380  Q
    |||||||||||||| ||| | ||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  11563456 agcgatgaagatgaccactcacgaggcgagagaagttactcgctatggcgagcgatgaatgtcagttctgcgggcagaatgcagttttcaacaaaactca 11563555  T
Q  381 cctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttcta 480  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||           ||||| ||||||||||    
T  11563556 cctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctggacatta-----------attcaacagatttcta 11563644  T
Q  481 ctcttaaatcaaccaattac 500  Q
    ||||||| ||||||||||||    
T  11563645 ctcttaattcaaccaattac 11563664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 50 - 248
Target Start/End: Original strand, 11562880 - 11563078
Alignment:
Q  50 acaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaatt 149  Q
    |||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||  ||||| |||||||||||||||||    
T  11562880 acaacaacttgaatgatatgaataacaatatttctatatcattcaatattcacataatatatgtatctcaaattagtcaacaacaatattcatattaatt 11562979  T
Q  150 cagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaa 248  Q
    ||||||||||  |    ||||  ||||| |||||||| |||||||||||||| ||||||||| ||||||||||||||| |||||||| ||||| |||||    
T  11562980 cagactcactgaaagctaataccattataaacaactttcattcctaccccaaagaccaactcagaacgtcacgtgcgacaaagatcgcaagaacactaa 11563078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 10 - 159
Target Start/End: Original strand, 11192158 - 11192307
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||  ||| |||||||||   ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11192158 gacagcaacaataacaacttgcatcataacaacattaacagcaacaacttgaatgatatgaacaataatatttctatatcatacaatattcacataatat 11192257  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcact 159  Q
    |||||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  11192258 atgtatctcaaattattcaacaacaatattcatattaattcagactcact 11192307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 10 - 159
Target Start/End: Original strand, 11562646 - 11562795
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| ||||||||| | || |||  ||| |||||||||  |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11562646 gacaacaacaataaaaccttgcatcataacaacattaacaacaacaatttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 11562745  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcact 159  Q
    ||||||||  |||||| ||||| |||||||||||||||||||||||||||    
T  11562746 atgtatctctaattattcaacaacaatattcatattaattcagactcact 11562795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 10 - 153
Target Start/End: Original strand, 6155854 - 6155998
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatca-caataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataata 108  Q
    |||| |||||||||||||| ||||  || |||||||||  | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6155854 gacagcaacaataacaacttgcaacttaacaacattaacaatcaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataaca 6155953  T
Q  109 tatgtatcttaaattatccaacatcaatattcatattaattcaga 153  Q
    ||||||||| ||||||| ||||| |||||||||||||||||||||    
T  6155954 tatgtatctcaaattattcaacaacaatattcatattaattcaga 6155998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 13179407 - 13179623
Alignment:
Q  55 aacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaattcaga 153  Q
    |||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||| || |||||| |||||| ||||| ||||||||||| |||    
T  13179407 aacttgaatgatatgaacaacaatattttctatatcatacatttttcacataatatatgtagctcaaattaaccaacaacaataatcatattaatttaga 13179506  T
Q  154 ctcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaag 253  Q
    ||||||  |   | |||   |||| |||||||| |||||||| |||||||||||||||  ||| | |||||||| |||||||| ||||| |||||  |||    
T  13179507 ctcactgaaaggctatacctttataaacaactttcattcctatcccaaggaccaactcataacattacgtgcgacaaagatcgcaagaacactaagtaag 13179606  T
Q  254 gttgactgccagtgagt 270  Q
    | ||||||||| |||||    
T  13179607 gctgactgccactgagt 13179623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 17691590 - 17691469
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    ||||||||||||||||||| |||  ||| ||| |||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691590 gacatcaacaataacaacttgcatcataacaatattaacaacaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 17691491  T
Q  110 atgtatcttaaattatccaaca 131  Q
    |||||| | |||||||||||||    
T  17691490 atgtatatcaaattatccaaca 17691469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 19569154 - 19569033
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||  ||| |||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19569154 gacagcaacaataacaacttgcatcataacaacattaacagcaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 19569055  T
Q  110 atgtatcttaaattatccaaca 131  Q
    |||||||| ||||||| |||||    
T  19569054 atgtatctcaaattattcaaca 19569033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 54876268 - 54876147
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||  ||| ||| |||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54876268 gacaacaacaataacaacttgcatcataacaatattaacaacaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 54876169  T
Q  110 atgtatcttaaattatccaaca 131  Q
    |||||||| |||||||||||||    
T  54876168 atgtatctcaaattatccaaca 54876147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 11192348 - 11192469
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||  ||| |||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  11192348 gacagcaacaataacaacttgcatcataacaacattaacagcaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataataa 11192447  T
Q  110 atgtatcttaaattatccaaca 131  Q
    |||||||| |||||||||||||    
T  11192448 atgtatctcaaattatccaaca 11192469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 17046429 - 17046550
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||  ||| ||| |||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17046429 gacaacaacaataacaacttgcatcataacaatattaacagcaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 17046528  T
Q  110 atgtatcttaaattatccaaca 131  Q
    |||||||| |||||||||||||    
T  17046529 atgtatctcaaattatccaaca 17046550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 304 - 487
Target Start/End: Complemental strand, 11885864 - 11885683
Alignment:
Q  304 aggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaaga-ctcacctaattccataactctaacct 402  Q
    |||| ||| ||| ||||||||| || |||||||||||||||| ||   |||||||||||| |||| | ||| | |||||| ||| ||||   |||||| |    
T  11885864 aggctagatcagctactcgctacggtgagcgatgaatgtcagctc---gggcagaatgcaatttttatcaaaaactcacccaatcccatggttctaacat 11885768  T
Q  403 taaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    ||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| ||| || ||||||||||    
T  11885767 taaaactgattctaatcattgttctatgaatagtctaaggtctggacactatttctacatcaattcaacaggttcctactcttaa 11885683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 14441435 - 14441556
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| ||| |||||||||| |||  ||| ||| |||||   ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14441435 gacagcaataataacaacttgcatcataacaatattaacagcaacaacttgaatgacatgaacaacaatatttctatatcatacaatattcacataatat 14441534  T
Q  110 atgtatcttaaattatccaaca 131  Q
    |||||||| |||||||||||||    
T  14441535 atgtatctcaaattatccaaca 14441556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 17685628 - 17685507
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    ||||||||||||||||||| | |  ||| ||| |||||  |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17685628 gacatcaacaataacaacttggatcataacaatattaacaacaacaacttgaatgctatgaacaacaatatttctatatcatacaatattcacataatat 17685529  T
Q  110 atgtatcttaaattatccaaca 131  Q
    |||||| |  ||||||||||||    
T  17685528 atgtatttctaattatccaaca 17685507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 6156002 - 6156094
Alignment:
Q  39 caacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||| |||||    
T  6156002 caacattaacaacaacaacttgaatgatatgaacaacaacatttctatatcatacaatattcacataacatatgtatctcaaattattcaaca 6156094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 395 - 487
Target Start/End: Original strand, 16050762 - 16050854
Alignment:
Q  395 tctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||| ||| || ||||||||||    
T  16050762 tctaacattaaaactgattctaatcattgttctatgaataatctaaggtatggacactatttctacatcaattcaacaggttcctactcttaa 16050854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 9511905 - 9511829
Alignment:
Q  55 aacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    ||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||| | |||||||||||||    
T  9511905 aacttgaatgatatgaacaacaatatttctacaacataccatattcacataatatatgtatttcaaattatccaaca 9511829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 9519880 - 9519804
Alignment:
Q  55 aacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    ||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||| | |||||||||||||    
T  9519880 aacttgaatgatatgaacaacaatatttctacaacataccatattcacataatatatgtatttcaaattatccaaca 9519804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 395 - 487
Target Start/End: Complemental strand, 12509568 - 12509476
Alignment:
Q  395 tctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    |||||||||||||||||||||||||||| ||||||||||   ||||||||| ||||||| ||||||||||||| | ||| |||||||||||||    
T  12509568 tctaaccttaaaactgattctaatcattattctatgaattgtctaaggtctggacactagttctacatcaatttaacaggtttctactcttaa 12509476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 42353438 - 42353367
Alignment:
Q  70 aacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattca 141  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||    
T  42353438 aacaacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaacattca 42353367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 22 - 211
Target Start/End: Original strand, 20417311 - 20417501
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatat-ttctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||| ||| ||| |||||| | || |||||||||||||| ||||||||||| || ||||||||||| | | ||||||||||||||| || ||    
T  20417311 aacaacttgcaacatatcaatattaataataacaacttgaatgatataaacaacaatatcttttatatcatacattttccacataatatatgtagctcaa 20417410  T
Q  121 attatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||| |||||| || || |||||||| || ||| |||||  |   | ||| | |||| |||||||||||  |||||||||| |||||||||    
T  20417411 attaaccaacaacattaatcatattagtttagattcactgaaaggctatacatttataaacaacttccaaccctaccccaaagaccaactc 20417501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 12470126 - 12470190
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  12470126 atgaacaacattatatctatatcatacaatattcacataatatatgtatctcaaattattcaaca 12470190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 14671148 - 14671212
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  14671148 atgaacaacattatgtctatatcatacaatattcacataatatatgtatctcaaattattcaaca 14671212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 14682647 - 14682711
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  14682647 atgaacaacattatgtctatatcatacaatattcacataatatatgtatctcaaattattcaaca 14682711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 211
Target Start/End: Original strand, 14818259 - 14818447
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||||| ||||| |||||| | || |||||||||||||| |||||| |||||| |||||||||||| | | |||||||||||| || |||||||    
T  14818259 caacttgcaatacagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacataatatatatagcttaaat 14818358  T
Q  123 tatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    || |||||| ||  | | |||||| || ||| |||||  | | | |||   |||| ||||||| ||||||||||||||| |||||||||    
T  14818359 taaccaacaacatcaattatattagtttagattcactgaaaagctatacctttataaacaactcccattcctaccccaaagaccaactc 14818447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 18700201 - 18700137
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  18700201 atgaacaacattacttctatatcatacaatattcacataatatatgtatctcaaattattcaaca 18700137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 70 - 144
Target Start/End: Original strand, 13519570 - 13519644
Alignment:
Q  70 aacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatat 144  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| || ||||||| ||||| ||| ||||||||    
T  13519570 aacaacattatttctatatcatacgatattcacataatatatgtacctcaaattattcaacaacaacattcatat 13519644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 274
Target Start/End: Original strand, 16059494 - 16059715
Alignment:
Q  52 aataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaattca 151  Q
    ||||||||||||||| | |||||||  |||||||||||||||| | | |||||||||||||||| | ||| || |||||| || || |||| ||||||||    
T  16059494 aataacttgaatgattt-aacaacatcatttctatatcatacactttccacataatatatgtatttcaaaataaccaacaacattaatcattttaattca 16059592  T
Q  152 gactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaaca 251  Q
     |||| ||  |     |||   || | ||||||||||||||||||||||| |||||||||  ||| |||||||||| || ||||| ||||| ||||   |    
T  16059593 aactctctgaaaggttatacctttgtaaacaacttccattcctaccccaaagaccaactcataacatcacgtgcgacaatgatcgcaagaacactaggta 16059692  T
Q  252 aggttgactgccagtgagtaact 274  Q
    ||| ||| ||||| |||||||||    
T  16059693 aggctgattgccaatgagtaact 16059715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 43889523 - 43889463
Alignment:
Q  71 acaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||| ||||||| |||||    
T  43889523 acaacattatttctaaatcatacaatattcacataatatatgtatctcaaattattcaaca 43889463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 211
Target Start/End: Complemental strand, 52338782 - 52338594
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| |||| |||||||||||||| || ||| | |||| |||||||||||| | | |||||||||||| || |||||||    
T  52338782 caacttgcaacatagcaatattaataacaacaacttgaatgatataaataacgacattttctatatcatacattttccacataatatatatagcttaaat 52338683  T
Q  123 tatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    || |||||| ||  | | ||||||  | ||| |||||  | | | |||   |||| ||||||||||||||||||||||| |||||||||    
T  52338682 taaccaacaacatcaattatattagcttagattcactgaaaagctatacctttataaacaacttccattcctaccccaatgaccaactc 52338594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 23395879 - 23395776
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||||||| |||| ||||| | || |||| ||||||||| |||||||||| ||||||||||||||| | | ||||||||||||||| ||| |    
T  23395879 aacaacttgcaatataacaacgttaataataacaactcgaatgatataaacaacaatattttctatatcatacattttccacataatatatgtagcttga 23395780  T
Q  121 atta 124  Q
    ||||    
T  23395779 atta 23395776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 45531315 - 45531248
Alignment:
Q  144 ttaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    ||||||||||||||||  |  |||||||||||||||||||||| |||||||||||||| |||||||||    
T  45531315 ttaattcagactcactgaaacacaatataattatgaacaactttcattcctaccccaaagaccaactc 45531248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 10550503 - 10550611
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| | || |||||||||||||| |||||| ||| ||||||||||||||| | | ||||||| |||| || |||||||    
T  10550503 caacttgcaacatagcaatattaataataacaacttgaatgatataaacaacgataatttctatatcatacattttccacataaaatatatagcttaaat 10550602  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  10550603 taaccaaca 10550611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 17548368 - 17548260
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaac-aatatttctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| |||| |||||||||||||| |||||| | | ||||||||||||||| | | |||||||||||| || ||| |||    
T  17548368 caacttgcaacatagcaatattaataacaacaacttgaatgatataaacaacgattttttctatatcatacattttccacataatatatatagcttgaat 17548269  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  17548268 taaccaaca 17548260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 13523230 - 13523120
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||| ||||||| |||||| | || |||||||||||||| |||||| ||| ||||||||||||||| | | | |||||||||  ||||||||    
T  13523230 aacaacttgcaacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttcctcataatataaatatcttaa 13523131  T
Q  121 attatccaaca 131  Q
    | || ||||||    
T  13523130 actaaccaaca 13523120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 466
Target Start/End: Complemental strand, 15447075 - 15447013
Alignment:
Q  404 aaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaat 466  Q
    ||||||||||||||  |||||||||||||||  |||||| || ||||||||||||||||||||    
T  15447075 aaaactgattctaagaattgttctatgaatagtctaaggactggacactatttctacatcaat 15447013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 12512476 - 12512388
Alignment:
Q  182 aacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagta 271  Q
    ||||| |||| |||||||||| | ||||||  ||| |||||||||| |||||||| |||||  |||||||||||||||||||| ||||||    
T  12512476 aactttcatttctaccccaag-atcaactctcaacatcacgtgcgacaaagatcgcaagaaccctaaacaaggttgactgccactgagta 12512388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 345
Target Start/End: Original strand, 16050702 - 16050747
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcag 345  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||    
T  16050702 cgcgaggcgagagcagctactcgctatggcgagcgatgaatgtcag 16050747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 3394819 - 3394711
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| | || |||||||||||||| |||||| ||| ||||||||||||||| | | ||||||||||   |||||||||     
T  3394819 caacttgcaacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacataatatgaatatcttaaac 3394720  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  3394719 taaccaaca 3394711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 487
Target Start/End: Complemental strand, 14250299 - 14250207
Alignment:
Q  395 tctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    |||||||||||||||||||||||||||  |  | ||||||  ||||||||| ||||||| ||||||||||| | | ||  |||||||||||||    
T  14250299 tctaaccttaaaactgattctaatcatcatcttgtgaatattctaaggtctggacactaattctacatcaacttaacaagtttctactcttaa 14250207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 12158648 - 12158690
Alignment:
Q  169 tataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||||| || |||||||||||||||||||||||||||||||||    
T  12158648 tataatcattaacaacttccattcctaccccaaggaccaactc 12158690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 274
Target Start/End: Original strand, 16044634 - 16044855
Alignment:
Q  52 aataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaattca 151  Q
    ||||||||||||||| | |||||||  |||||||||||||||| | | | |||||||||||||| | ||| || |||||| || || |||| ||||||||    
T  16044634 aataacttgaatgattt-aacaacatcatttctatatcatacactttccgcataatatatgtatttcaaaataaccaacaacattaatcattttaattca 16044732  T
Q  152 gactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaaca 251  Q
     |||| ||  |     |||   || | |||||||| |||||||||||||| |||||| ||  ||| |||||||||| || ||||| ||||| ||||   |    
T  16044733 aactctctgaaaggttatacctttgtaaacaactttcattcctaccccaaagaccaattcataacatcacgtgcgacaatgatcgcaagaacactaggta 16044832  T
Q  252 aggttgactgccagtgagtaact 274  Q
    ||| ||| ||||| |||||||||    
T  16044833 aggctgattgccactgagtaact 16044855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 16050113 - 16050190
Alignment:
Q  54 taacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacat 132  Q
    ||||||||||||||| |||||||  |||||||||||||||| | | |||||||||||||||| | ||| || |||||||    
T  16050113 taacttgaatgatat-aacaacatcatttctatatcatacactttccacataatatatgtatatcaaaataaccaacat 16050190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 17548213 - 17548176
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||| |||||||||||||||||||||||||||||||||    
T  17548213 ttataaacaacttccattcctaccccaaggaccaactc 17548176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 18367575 - 18367467
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||| ||| |||||| | || |||||||||||||| |||||| ||| |||| |||||||||| | | |||||||||||  |||||||||     
T  18367575 caacttgcaacataacaatattaataataacaacttgaatgatataaacaacgatattttcaatatcatacattttccacataatataaatatcttaaac 18367476  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  18367475 taaccaaca 18367467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 274
Target Start/End: Complemental strand, 11886332 - 11886238
Alignment:
Q  179 aacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    ||||||||||||||||| |||||| | ||||||  ||| ||||||||||  || |||| ||| |  |||||||||||||||| ||| |||||||||    
T  11886332 aacaacttccattcctatcccaag-atcaactcacaacatcacgtgcgacgaacatcgcaaggaccctaaacaaggttgactaccactgagtaact 11886238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 469
Target Start/End: Complemental strand, 42324186 - 42324115
Alignment:
Q  398 aaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattca 469  Q
    |||| ||||| || ||||||||||| | |||||||||| |||||||||| ||||| ||||| ||| ||||||    
T  42324186 aaccctaaaattggttctaatcattatactatgaataatctaaggtctaaacactgtttcttcattaattca 42324115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 13520598 - 13520500
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaa 121  Q
    ||||| |||| ||||||| |||||| | || || ||||||||||| |||||| ||| ||||||||||||||| | | | |||||||||  |||||||||    
T  13520598 caacttgcaacatagcaatattaataataacaatttgaatgatataaacaacgatattttctatatcatacattttcctcataatataaatatcttaaa 13520500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 15447654 - 15447584
Alignment:
Q  188 cattcctaccccaaggaccaactcggaacgtcacgtgcga-aaaagatcgtaagaaaactaaacaaggttg 257  Q
    ||||||||||| ||||| ||||||  ||| ||| |||||| ||||||||| |||||| |||||||||||||    
T  15447654 cattcctaccctaaggatcaactcataacatcatgtgcgacaaaagatcgcaagaaacctaaacaaggttg 15447584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 6158636 - 6158701
Alignment:
Q  30 gcaatatagcaacattaatcacaataacttgaatgatatgaacaacaat-atttctatatcataca 94  Q
    |||| |||||||||| ||| | || |||||||||||||| ||||| ||| ||||||||||||||||    
T  6158636 gcaacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcataca 6158701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 6819375 - 6819452
Alignment:
Q  55 aacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||||||  |||||| |||||| |||||||||||| | | |||||||||||  ||||||||| || ||||||    
T  6819375 aacttgaatgataataacaacgatattttctatatcatacattttccacataatataaatatcttaaactaaccaaca 6819452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 10550654 - 10550691
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  10550654 ttataaacaacttccattcctatcccaaggaccaactc 10550691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 14250746 - 14250693
Alignment:
Q  218 tcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagta 271  Q
    |||||||||| |||||||| |||||   ||||||||||||||||||| ||||||    
T  14250746 tcacgtgcgacaaagatcgcaagaaccttaaacaaggttgactgccactgagta 14250693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 14642363 - 14642298
Alignment:
Q  30 gcaatatagcaacattaatcacaataacttgaatgatatgaacaacaat-atttctatatcataca 94  Q
    |||| |||||||||| ||| | || |||||||||||||| ||||| ||| ||||||||||||||||    
T  14642363 gcaacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcataca 14642298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 22146966 - 22146901
Alignment:
Q  404 aaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattca 469  Q
    ||||||| ||||||||||||| ||||||| || ||||||| |  ||||||||||| ||| ||||||    
T  22146966 aaaactggttctaatcattgtactatgaacaatctaaggtatgaacactatttcttcattaattca 22146901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 368
Target Start/End: Complemental strand, 23052608 - 23052524
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagtttt 368  Q
    |||||||||| | ||||| |||||||||||||   | | ||||||||||||||||||||||||    || ||||||||||||||||||    
T  23052608 agcgatgaagttcatcactcgcgaggcgagaatcatcattcgctatggcgagcgatgaatgtc---gcttcgggcagaatgcagtttt 23052524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 37641702 - 37641637
Alignment:
Q  404 aaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattca 469  Q
    ||||||| ||||||||||||| ||||||| || ||||||| |  ||||||||||| ||| ||||||    
T  37641702 aaaactggttctaatcattgtactatgaacaatctaaggtatgaacactatttcttcattaattca 37641637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 179524 - 179416
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| ||||||   || |||||||||||||  |||||| |||||| |||||||| ||| | | |||||||||||  |||||||||     
T  179524 caacttgcaacatagcaatattaatagtaacaacttgaatgataataacaacgatattttctatatcaaacattttgcacataatataaatatcttaaac 179425  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  179424 taaccaaca 179416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 141
Target Start/End: Complemental strand, 15932308 - 15932201
Alignment:
Q  35 atagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacat-aatatatgtatcttaaattatccaacat 132  Q
    |||||| ||||||| | || |||||||||| ||| ||||||| ||||| |||||||||||||| | ||||| || ||||||| || ||||||| |||||     
T  15932308 atagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcatacaatttccacataaacatatgtaactcaaattattcaacaa 15932210  T
Q  133 caatattca 141  Q
    ||| |||||    
T  15932209 caacattca 15932201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 141
Target Start/End: Complemental strand, 17519678 - 17519567
Alignment:
Q  31 caatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacat-aatatatgtatcttaaattatcca 128  Q
    ||||||| || ||||||| | || |||||||||| ||||| || || ||||| |||||||||||| | ||||||| |||||||||| || ||||||| ||    
T  17519678 caatataacatcattaataataacaacttgaatggtatgacca-cattattttctatatcatacatttttcacataaatatatgtaactcaaattattca 17519580  T
Q  129 acatcaatattca 141  Q
    ||| ||| |||||    
T  17519579 acaacaacattca 17519567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 141
Target Start/End: Complemental strand, 17534540 - 17534429
Alignment:
Q  31 caatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacat-aatatatgtatcttaaattatcca 128  Q
    ||||||| || ||||||| | || |||||||||| ||||| || || ||||| |||||||||||| | ||||||| |||||||||| || ||||||| ||    
T  17534540 caatataacatcattaataataacaacttgaatggtatgacca-cattattttctatatcatacatttttcacataaatatatgtaactcaaattattca 17534442  T
Q  129 acatcaatattca 141  Q
    ||| ||| |||||    
T  17534441 acaacaacattca 17534429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 141
Target Start/End: Complemental strand, 41173172 - 41173065
Alignment:
Q  35 atagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacat-aatatatgtatcttaaattatccaacat 132  Q
    |||||| ||||||| | || |||||||||||||| ||||||| || ||||||||||||||| | | ||||| |||||||||| || ||||| | |||||     
T  41173172 atagcatcattaataataacaacttgaatgatat-aacaacattattttctatatcatacattttccacataaatatatgtaactcaaattcttcaacaa 41173074  T
Q  133 caatattca 141  Q
    ||| |||||    
T  41173073 caacattca 41173065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 42325053 - 42324969
Alignment:
Q  11 acatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaat-atttctatatcataca 94  Q
    |||||||||  |||| || |||| |||||||||| ||| | || |||||||||||||| ||||| ||| ||||| ||||||||||    
T  42325053 acatcaacataaacatcttgcaacatagcaacatgaataataacaacttgaatgatataaacaataataatttccatatcataca 42324969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 52213294 - 52213186
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| |||||||| | ||| | || || ||||||||||| |||||| |||||| |||||| ||||| | | ||||||||||||  | |||||||    
T  52213294 caacttgcaaaatagcaacttcaataataacaatttgaatgatataaacaacgatattttctatataatacattttccacataatatatacaacttaaat 52213195  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  52213194 taaccaaca 52213186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 172; Significance: 3e-92; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 282 - 500
Target Start/End: Original strand, 3539557 - 3539776
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactca 380  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  3539557 agcggtgaagatgatcactcgcgaggcgagaacagttacttgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttgaacaaaactca 3539656  T
Q  381 cctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttcta 480  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||| || |||||||    
T  3539657 cctaattccataactctaactttaaaactgattctaatcattgttctatgaataacctaaggtttggacactatctctacatcaattcaacatatttcta 3539756  T
Q  481 ctcttaaatcaaccaattac 500  Q
    ||||||||||||||||||||    
T  3539757 ctcttaaatcaaccaattac 3539776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 10 - 274
Target Start/End: Original strand, 3538960 - 3539225
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||| ||||||| |||| ||| |||||| ||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3538960 gacagcaacaacaacaacttgcaacataacaacatcaacaacaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 3539059  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagac-tcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaa 208  Q
    |||||||| ||||||||||||| ||| |||||||||||||||||| |||||  |||||||||||||||| |||||||| |||||||||||||| ||||||    
T  3539060 atgtatctcaaattatccaacaacaacattcatattaattcagacttcactgaacaacaatataattataaacaactttcattcctaccccaaagaccaa 3539159  T
Q  209 ctcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    ||| ||| || |||||||| | |||||| |||||  |||||||||||||||||||| |||||||||    
T  3539160 ctcagaatgttacgtgcgacagagatcgcaagaaccctaaacaaggttgactgccactgagtaact 3539225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 283 - 489
Target Start/End: Complemental strand, 18390545 - 18390338
Alignment:
Q  283 gcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactcac 381  Q
    ||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||  || ||| ||    
T  18390545 gcgatgaagatgatcactcgcgaggcgagaatagctactcgctatggcgagcgatgaatgtcagctctacgggcagaatgcagttttcacaaaaactaac 18390446  T
Q  382 ctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctac 481  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||| |||||| || |    
T  18390445 ctaattccacaactctaaccttaaaactgattctaatcattgttctatgaataatctaaagtctggacactatttctacatcaattcaacagattcctgc 18390346  T
Q  482 tcttaaat 489  Q
    ||||||||    
T  18390345 tcttaaat 18390338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 282 - 500
Target Start/End: Original strand, 25141924 - 25142143
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactca 380  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||| || |||||||||||| ||||||||||||||||||||||||  || |||||    
T  25141924 agcgatgaagatgatcactcgcgaggcgagaacaactactcgctatggcaagtgatgaatgtcagctctacgggcagaatgcagttttcacaaaaactca 25142023  T
Q  381 cctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttcta 480  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||| | ||||||| ||||||||||||||||||||| | |||||| |||    
T  25142024 cctaattccacaactctaaccttaaaactgattctaatcattcttctatgaataatccaaggtctggacactatttctacatcaatttaacagattccta 25142123  T
Q  481 ctcttaaatcaaccaattac 500  Q
    ||||||| ||||||||||||    
T  25142124 ctcttaattcaaccaattac 25142143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 10 - 274
Target Start/End: Original strand, 22259193 - 22259457
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| ||| |||||||||| |||| ||| ||||||| |  |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22259193 gacagcaataataacaacttgcaacataacaacatttacaacaacaacttgaataatatgaacaacaatatttctatatcatacaatattcacataatat 22259292  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaac 209  Q
    ||| |||| |||||||| | || |||||||||||||||||||||||||||  |  |||||| |||||| |||||||| |||||||||||||| |||||||    
T  22259293 atgcatctcaaattatctagcaacaatattcatattaattcagactcactgaaagacaatacaattataaacaactttcattcctaccccaaagaccaac 22259392  T
Q  210 tcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    |  ||||| |||||||||||||||||| |||||  ||||| |||| ||||||||| | |||||||    
T  22259393 ttagaacgccacgtgcgaaaaagatcgcaagaacgctaaataaggctgactgccactaagtaact 22259457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 317 - 497
Target Start/End: Original strand, 27852423 - 27852603
Alignment:
Q  317 tactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactcacctaattccataactctaaccttaaaactgattcta 416  Q
    ||||||| | ||||||||||||||| |||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27852423 tactcgcaacggcgagcgatgaatgacagttctacgggcagaatgcaaatttcaacaaaactcacctaattccataactctaaccttaaaactgattcta 27852522  T
Q  417 atcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaaatcaaccaat 497  Q
    |||| | |||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  27852523 atcaattttctatgaataatctaaggtctggacactatttctacatcaattcaacagatttctactcttaaatccaccaat 27852603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 22 - 275
Target Start/End: Original strand, 44071724 - 44071977
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaa 121  Q
    ||||||| |||| ||| ||||| |||| | || |||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||    
T  44071724 aacaacttgcaacataacaacactaataataacaacttgaacgatatgaacaacaatatttctatatcatacaatttccacataatatatgtatctcaaa 44071823  T
Q  122 ttatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcac 221  Q
    |||||||||| ||||| |||| ||||||||||||||||  |  |||||| |||||| |||||||| |||||||||||||| ||||||||| |||| ||||    
T  44071824 ttatccaacaacaataatcatgttaattcagactcactgaaagacaatacaattataaacaacttacattcctaccccaaagaccaactcagaacatcac 44071923  T
Q  222 gtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaactt 275  Q
    |||||| |||||||| ||||| |||||  |||| ||||||||| ||||||||||    
T  44071924 gtgcgacaaagatcgcaagaacactaagtaaggctgactgccactgagtaactt 44071977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 25141307 - 25141561
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||  ||| |||||||||   ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25141307 gacaacaacaataacaacttgcatcataacaacattaacagcaacaacttgaatgatatgaacaacaatatttctatatcataaaatattcacataatat 25141406  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaac 209  Q
    |||||||| ||||||| ||||| ||||| | ||||||||||||||||| |  |  |||||| |||||| |||||||| |||| ||||||||| |||||||    
T  25141407 atgtatctcaaattattcaacaacaataattatattaattcagactcagtgaaagacaatacaattataaacaactttcatttctaccccaaagaccaac 25141506  T
Q  210 tcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgcca 264  Q
    || ||||||||||||||| |||||||| ||||| |||||  |||| |||||||||    
T  25141507 tcagaacgtcacgtgcgacaaagatcgcaagaacactaattaaggctgactgcca 25141561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 55 - 274
Target Start/End: Original strand, 27851844 - 27852063
Alignment:
Q  55 aacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaattcagac 154  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| | |||||| |||||| | ||| || |||||||||||||    
T  27851844 aacttgaatgatatgaacaacaatatttctatatcatacaatttccacataatatatgtatttcaaattaaccaacaactataatcttattaattcagac 27851943  T
Q  155 tcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaagg 254  Q
    |||||  |  || ||| | |||| || |||||||||||||||||||| ||||||||| |||| |||||||||| |||||||| ||||| |||||  ||||    
T  27851944 tcactgaaagactatacatttataaagaacttccattcctaccccaaagaccaactcagaacatcacgtgcgacaaagatcgcaagaacactaagtaagg 27852043  T
Q  255 ttgactgccagtgagtaact 274  Q
     ||||||| | |||||||||    
T  27852044 ctgactgcgattgagtaact 27852063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 22 - 274
Target Start/End: Original strand, 27860517 - 27860769
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaa 121  Q
    ||||||| |||| ||| ||||| | || | || |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||| ||     
T  27860517 aacaacttgcaacataacaacactgataataacaacttgaatgatatgaacaacaatatttctatatcatacaatttccacataatatatctatctcaat 27860616  T
Q  122 ttatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcac 221  Q
    ||| |||||| || || |||||||||||||||||||||  |  || ||| | |||  ||||||||||||||||||||||| ||||||||| |||| | ||    
T  27860617 ttaaccaacaacattaatcatattaattcagactcacttaaagactatacatttaaaaacaacttccattcctaccccaatgaccaactcagaacattac 27860716  T
Q  222 gtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    |||||| |||||||| ||||| |||||  |||| ||||| | | |||||||||    
T  27860717 gtgcgataaagatcgcaagaacactaagtaaggctgactactactgagtaact 27860769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 300 - 496
Target Start/End: Original strand, 44072297 - 44072493
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactcacctaattccataactctaa 399  Q
    |||||||||| ||  ||||||||||||||||||||||||   |  | |||||||||||||  ||| ||||| ||| |||| || ||||||||| ||||||    
T  44072297 cgcgaggcgacaagggttactcgctatggcgagcgatgacgatatgctctacgggcagaacccaggtttcagcaaaactctcccaattccatatctctaa 44072396  T
Q  400 ccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaaatcaaccaa 496  Q
    ||  ||||||||||||||||||||| |||||||| | |||||||||  |||||||||||||||||||||| |||||||||||| |||||| ||||||    
T  44072397 ccccaaaactgattctaatcattgtactatgaatcatctaaggtctgaacactatttctacatcaattcaacagatttctactattaaattaaccaa 44072493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 282 - 487
Target Start/End: Original strand, 5985899 - 5986103
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcag-ttttcaacaagactc 379  Q
    |||||||||| | ||||| |||||||||||| ||| ||||||||||||| ||||||||||||||| ||   ||||||||||||| |||||   || ||||    
T  5985899 agcgatgaagttcatcactcgcgaggcgagatcagctactcgctatggcaagcgatgaatgtcagctc---gggcagaatgcagattttctcaaaaactc 5985995  T
Q  380 acctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttct 479  Q
    ||| ||   |||   ||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||| ||| || ||    
T  5985996 acccaaactcatggttctaaccttaaaactgattctaatcatggttctatgaataatctaaggtctggacactatttctacatcaattcaacaggttcct 5986095  T
Q  480 actcttaa 487  Q
    ||||||||    
T  5986096 actcttaa 5986103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 10 - 159
Target Start/End: Original strand, 25141117 - 25141266
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    ||||||||||||||||||| | |  ||| |||||||||   ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  25141117 gacatcaacaataacaacttgtatcataacaacattaacagcaacaacttgaatgatatgaacaataatatttctatatcatataatattcacataatat 25141216  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcact 159  Q
    |||||||| ||||||| ||||| |||||||||| |||||| |||||||||    
T  25141217 atgtatctcaaattattcaacaacaatattcatgttaatttagactcact 25141266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 327 - 487
Target Start/End: Original strand, 14694094 - 14694252
Alignment:
Q  327 ggcgagcgatgaatgtcagttctacgggcagaat-gcagttttcaacaagactcacctaattccataactctaaccttaaaactgattctaatcattgtt 425  Q
    ||||||||||||||||||| ||   ||||||||| |||| |||   ||| ||||| ||| ||||||   |||||||||||||||||||||||||||||||    
T  14694094 ggcgagcgatgaatgtcagctc---gggcagaattgcagattttctcaaaactcatctagttccatggttctaaccttaaaactgattctaatcattgtt 14694190  T
Q  426 ctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    |||||||||  ||||||||| ||||||||||||||||||||||| ||| |||||||||||||    
T  14694191 ctatgaatagtctaaggtctggacactatttctacatcaattcaacaggtttctactcttaa 14694252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 55 - 274
Target Start/End: Complemental strand, 18391116 - 18390896
Alignment:
Q  55 aacttgaatgatatgaacaacaatatttct-atatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaattcaga 153  Q
    |||||||||||||||||||||||||||||  |||||||| | | | ||||||||||||||| || |||||| ||||||  |||| ||||||||||| |||    
T  18391116 aacttgaatgatatgaacaacaatatttccgatatcatatattttccacataatatatgtagctcaaattaaccaacaaaaataatcatattaatttaga 18391017  T
Q  154 ctcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaag 253  Q
    ||||||  |   | |||   |||| |||||||| ||||||||||||||||||||||||  ||| |||||||||| |||||||| || || |||||  |||    
T  18391016 ctcactgaaaggctatacctttataaacaactttcattcctaccccaaggaccaactcataacatcacgtgcgacaaagatcgcaacaacactaagtaag 18390917  T
Q  254 gttgactgccagtgagtaact 274  Q
    | | ||||||| |||||||||    
T  18390916 gctaactgccactgagtaact 18390896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 347 - 493
Target Start/End: Original strand, 22259825 - 22259971
Alignment:
Q  347 tctacgggcagaatgcagttttcaacaaga-ctcacctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtct 445  Q
    |||||||||||||| ||| ||||| ||| | ||| || |||| |||| |||||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  22259825 tctacgggcagaatacaggtttcagcaaaaactc-ccaaatttcatatctctaaccctaaaactgattctaatcattgtactatgaataatctaaggtct 22259923  T
Q  446 agacactatttctacatcaattcatcagatttctactcttaaatcaac 493  Q
      |||||||||||||||||||||| || |||||||||  |||||||||    
T  22259924 gaacactatttctacatcaattcaacatatttctactactaaatcaac 22259971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 300 - 487
Target Start/End: Original strand, 25045860 - 25046045
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaat-gcagttttcaacaagactcacctaattccataactcta 398  Q
    ||||||||| | |||| ||||||||||||| ||||||||||||||| ||   ||||||||| |||  |||   ||| ||||| | ||||| ||   ||||    
T  25045860 cgcgaggcggggacagctactcgctatggcaagcgatgaatgtcagctc---gggcagaattgcatattttctcaaaactcaaccaattcaatggttcta 25045956  T
Q  399 accttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| ||||||| ||||||| ||||| | ||| |||||||||||||    
T  25045957 accttaaaactgattctaatcattgttctatgaatagtctaaggtctggacactaattctacaccaatttaacaggtttctactcttaa 25046045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 9784906 - 9784970
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  9784906 atgaacaacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaaca 9784970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 242
Target Start/End: Complemental strand, 10897260 - 10897138
Alignment:
Q  120 aattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtc 219  Q
    |||||| ||||| |||||||||||||||||||||||||||  |    ||||||||||| |||||||| | ||| |||||||| ||||||||| |||  ||    
T  10897260 aattattcaacaacaatattcatattaattcagactcactgaaagctaatataattataaacaactttccttcttaccccaaagaccaactcagaatatc 10897161  T
Q  220 acgtgcgaaaaagatcgtaagaa 242  Q
    |||||||| | |||||| |||||    
T  10897160 acgtgcgacacagatcgcaagaa 10897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 35 - 274
Target Start/End: Original strand, 14693457 - 14693696
Alignment:
Q  35 atagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataata-tatgtatcttaaattatccaacat 132  Q
    |||||||||||||||| || |||||||||||||| |||| |||||||| |||||||||||| | | ||||||||  ||| || || |||||| |||||      
T  14693457 atagcaacattaatcataacaacttgaatgatat-aacatcaatattttctatatcatacattttccacataattgtatatagctcaaattaaccaacca 14693555  T
Q  133 caatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaag 232  Q
    || ||  ||  ||||||||||||| ||  |  ||  ||||||  | |||||||| |||||||||||||||||||||||| |||| |||  |||||| | |    
T  14693556 cattaa-cagcttaattcagactctctgaaacaccttataatagtcaacaactttcattcctaccccaaggaccaactcagaacatcatatgcgaagagg 14693654  T
Q  233 atcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    |||| |||||  ||||||||||||| ||| || | |||||||    
T  14693655 atcgcaagaaccctaaacaaggttgtctgtcactaagtaact 14693696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 23069166 - 23069114
Alignment:
Q  79 atttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| |||||    
T  23069166 atttctatatcataaaatattcacataatatatgtatctcaaattattcaaca 23069114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 5985470 - 5985532
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcg 236  Q
    |||| ||||||||||||||||||||||| |||||||||  ||| |||||| ||||||||||||    
T  5985470 ttataaacaacttccattcctaccccaaagaccaactcataacttcacgttcgaaaaagatcg 5985532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 211
Target Start/End: Original strand, 19358182 - 19358356
Alignment:
Q  35 atagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataa-tatatgtatcttaaattatccaacat 132  Q
    |||||| ||||||| | || |||||||||||||| ||||||| ||||| |||||||||||  | | ||||||| |||||||| || |||||| | ||||     
T  19358182 atagcatcattaataataacaacttgaatgatat-aacaacattattttctatatcataccttttccacataaatatatgtaactcaaattaac-aacaa 19358279  T
Q  133 caatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |  || |||| ||||||||||||| ||  |  |||||||||||||||||||||| ||||| | |||||| |||||||||    
T  19358280 ct-taatcat-ttaattcagactcgctgaaacacaatataattatgaacaactttcattcatgccccaaagaccaactc 19358356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 6477958 - 6477921
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||| |||||||||||||||||||||||||||||||||    
T  6477958 ttataaacaacttccattcctaccccaaggaccaactc 6477921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 6478117 - 6478029
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatat 111  Q
    ||||| |||| ||||||| |||||| |||| |||||||||||||| |||||| | | |||||||||||| || | | ||||||||||||    
T  6478117 caacttgcaacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatccattttccacataatatat 6478029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 25045396 - 25045486
Alignment:
Q  179 aacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagta 271  Q
    |||||||| |||||||| |||||| | ||||||  ||| |||||| ||| |||||||| |||||  |||||||||| ||||||||| ||||||    
T  25045396 aacaacttacattcctaacccaag-atcaactcacaacatcacgtacgacaaagatcgcaagaaccctaaacaagg-tgactgccactgagta 25045486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1695 (Bit Score: 164; Significance: 2e-87; HSPs: 2)
Name: scaffold1695
Description:

Target: scaffold1695; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 7 - 274
Target Start/End: Original strand, 580 - 847
Alignment:
Q  7 atggacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataa 106  Q
    ||||||| |||||||||||||| | || ||| |||||| ||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  580 atggacaacaacaataacaacttgtaacataacaacatcaacaacaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataa 679  T
Q  107 tatatgtatcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggacc 206  Q
    ||||||||||| ||||||||||||| ||| ||||||| |||||||||||||||  ||||||| ||||| || |||||||| |||||||||||||| ||||    
T  680 tatatgtatctcaaattatccaacaacaacattcataataattcagactcactgaacaacaacataataataaacaactttcattcctaccccaaagacc 779  T
Q  207 aactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    ||||| |||||| ||||||||||||||||| |||||  |||||||||||||||||||||| |||||||    
T  780 aactcagaacgttacgtgcgaaaaagatcgcaagaaccctaaacaaggttgactgccagtaagtaact 847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1695; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 342
Target Start/End: Original strand, 1147 - 1189
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgt 342  Q
    ||||||||||||  | |||||||||||||||||||||||||||    
T  1147 cgcgaggcgagaggaattactcgctatggcgagcgatgaatgt 1189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 164; Significance: 2e-87; HSPs: 3)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 282 - 500
Target Start/End: Complemental strand, 1390 - 1171
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactca 380  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||    
T  1390 agcgatgaagatgatcactcgcgaggcgagaacagttactcgctatggcgagcgatggatgtcagttctacgggcagaatggagttttcaacaaaactca 1291  T
Q  381 cctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttcta 480  Q
    ||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||  |||||||| |||| |||||||||||||||||| ||||||||||    
T  1290 cctaattccgtaactctaaccttaaaagtgattataatcattgttctatgaataatgtaaggtctggacattatttctacatcaattcaacagatttcta 1191  T
Q  481 ctcttaaatcaaccaattac 500  Q
    ||||||||||||| ||||||    
T  1190 ctcttaaatcaactaattac 1171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 108 - 274
Target Start/End: Complemental strand, 4260 - 4096
Alignment:
Q  108 atatgtatcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggacca 207  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||||||  |  ||  || |||||| |||||||| |||||||||||||| |||||    
T  4260 atatgtatctcaaattatccaacaacaatcttcatattaattcagactcactgaaagac--tacaattataaacaactttcattcctaccccaaagacca 4163  T
Q  208 actcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    |||| ||| ||||||||||| |||||||| ||||| |||||||||||||||||| || |||||||||    
T  4162 actcagaatgtcacgtgcgacaaagatcgcaagaacactaaacaaggttgactgacactgagtaact 4096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 108 - 274
Target Start/End: Complemental strand, 8820 - 8656
Alignment:
Q  108 atatgtatcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggacca 207  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||||||  |  ||  || |||||| |||||||| |||||||||||||| |||||    
T  8820 atatgtatctcaaattatccaacaacaatcttcatattaattcagactcactgaaagac--tacaattataaacaactttcattcctaccccaaagacca 8723  T
Q  208 actcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    |||| ||| ||||||||||| |||||||| ||||| |||||||||||||||||| || |||||||||    
T  8722 actcagaatgtcacgtgcgacaaagatcgcaagaacactaaacaaggttgactgacactgagtaact 8656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 149; Significance: 2e-78; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 10 - 274
Target Start/End: Complemental strand, 136448 - 136184
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| ||||||| |||||| |||| |||  ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  136448 gacaacaacaatgacaacttgcaacataataacattaataacaacaacttgaatgatatgaacaacaatatttctatatcatacaattttcacataatat 136349  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaac 209  Q
    |||||||| ||||||||||||  ||||| |||||||||||||||||||||  | |||||| ||||||| |||||||| |||||||||||||| |||||||    
T  136348 atgtatctcaaattatccaactacaataatcatattaattcagactcactgaaaaacaatgtaattataaacaactttcattcctaccccaaagaccaac 136249  T
Q  210 tcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    || |||| |||||||||| |||||||| ||||| |||||| |||| |||||| || |||||||||    
T  136248 tcagaacatcacgtgcgacaaagatcgcaagaacactaaataaggatgactgtcactgagtaact 136184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 315 - 498
Target Start/End: Complemental strand, 135801 - 135618
Alignment:
Q  315 gttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactcacctaattccataactctaaccttaaaactgattc 414  Q
    |||||||||||||||||||||||    || | |||||||||||||   || ||||| ||| |||| || ||||||||| ||||||||  |||||||||||    
T  135801 gttactcgctatggcgagcgatggcgatctgctctacgggcagaacttaggtttcagcaaaactctcccaattccatatctctaaccccaaaactgattc 135702  T
Q  415 taatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaaatcaaccaatt 498  Q
    |||||||||| |||||||| | |||||||||  |||||||||||||||||||||| |||||||||||| |||||| ||||||||    
T  135701 taatcattgtactatgaatcatctaaggtctgaacactatttctacatcaattcaacagatttctactattaaattaaccaatt 135618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 341
Target Start/End: Complemental strand, 135866 - 135825
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatg 341  Q
    |||||||||| ||  |||||||||||||||||||||||||||    
T  135866 cgcgaggcgacaagggttactcgctatggcgagcgatgaatg 135825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 1e-73; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 10 - 274
Target Start/End: Complemental strand, 21618871 - 21618608
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||| ||||| | || ||| |||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21618871 gacagcaacaatagcaacttgtaacataacaacatcaacaacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 21618772  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaac 209  Q
    || ||||| |||||||||||||  |||||||||| |||||||||||||||  ||||||| |||||||| ||||||||||||||||| ||||| |||||||    
T  21618771 atttatctcaaattatccaacaagaatattcataataattcagactcactgaacaacaacataattataaacaacttccattccta-cccaaagaccaac 21618673  T
Q  210 tcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    |  |||||| ||||||||||||||||| |||||  |||||||| ||||| | ||| |||||||||    
T  21618672 ttagaacgttacgtgcgaaaaagatcgcaagaaccctaaacaaagttgaattccactgagtaact 21618608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 38 - 274
Target Start/End: Original strand, 29914523 - 29914759
Alignment:
Q  38 gcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaata 137  Q
    |||||||||| ||||| |||||||||||||||||| || |||||||||||| ||||||||||| |||||||||||||||| |||| |||||| | ||| |    
T  29914523 gcaacattaaccacaacaacttgaatgatatgaacgactatatttctatattatacaatattcgcataatatatgtatctcaaatcatccaaaaacaaca 29914622  T
Q  138 ttcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgt 237  Q
    ||||||||||||||||||||||  |||||||||||||||| ||| |||| ||||||||||  || ||| ||||  ||||||||||||||| || ||||      
T  29914623 ttcatattaattcagactcactgaacaacaatataattataaaccactttcattcctacctgaaagactaacttagaacgtcacgtgcgacaaggatcac 29914722  T
Q  238 aagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  29914723 aagaacactaaacaaggttgactgccactgagtaact 29914759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 282 - 498
Target Start/End: Complemental strand, 21618257 - 21618043
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactca 380  Q
    ||||||||| |||||||| |||||||||||||||| |||||||||| |||||||||||||||  | |||||||||||||||||| ||||| ||| |||||    
T  21618257 agcgatgaatatgatcactcgcgaggcgagaacagctactcgctatagcgagcgatgaatgttggctctacgggcagaatgcagatttca-caaaactca 21618159  T
Q  381 cctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttcta 480  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||| | |||||||  |||||||||||||| || ||| |||    
T  21618158 cctaattccataactctaaccttaaaattgattctaatcattgtgctatgaataatctaaggtttggacacta--tctacatcaattcaacatattccta 21618061  T
Q  481 ctcttaaatcaaccaatt 498  Q
    |||| |||| || |||||    
T  21618060 ctctcaaattaatcaatt 21618043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 20565639 - 20565778
Alignment:
Q  18 caataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatct 117  Q
    ||||||||||| |||  ||| |||||||||   ||| || || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20565639 caataacaacttgcatcataacaacattaacagcaacaatttcaatgatatgatcaacaatatttctatatcatacaatattcacataatatatgtatct 20565738  T
Q  118 taaattatccaacatcaatattcatattaattcagactca 157  Q
     ||||||| ||||| ||| |||||||||||||||||||||    
T  20565739 caaattattcaacaacaacattcatattaattcagactca 20565778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 300 - 487
Target Start/End: Original strand, 10953831 - 10954016
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaat-gcagttttcaacaagactcacctaattccataactcta 398  Q
    |||||||||| | ||||||||||||||||||||||||||||||||| ||   ||||||||| | || |||   ||| ||||| | ||||| ||   ||||    
T  10953831 cgcgaggcgatatcagttactcgctatggcgagcgatgaatgtcagctc---gggcagaattgtagattttctcaaaactcatccaattcaatggttcta 10953927  T
Q  399 accttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||| | ||  |||||||||||||    
T  10953928 accttaaaactgattctaatcattgttctatgaatagtctaaggtctggacactatttctacatcaatttaacaagtttctactcttaa 10954016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 55 - 274
Target Start/End: Complemental strand, 20469912 - 20469692
Alignment:
Q  55 aacttgaatgata-tgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaattcaga 153  Q
    ||||||||||||| |||||| |||||| ||||||||||||||| | |||||||||||||||||| |||||| |||||| || || |||| ||||||||||    
T  20469912 aacttgaatgataatgaacatcaatatctctatatcatacaatttccacataatatatgtatctcaaattaaccaacaacattaatcattttaattcaga 20469813  T
Q  154 ctcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaag 253  Q
    ||| ||  |   | ||| | |||| |||||||||| ||||| |||||| |||||||||  ||  |||||||||| |||||||| |||||  ||||   ||    
T  20469812 ctctctgaaaggctatacatttataaacaacttcctttcctgccccaaagaccaactcataatatcacgtgcgacaaagatcgcaagaactctaagtgag 20469713  T
Q  254 gttgactgccagtgagtaact 274  Q
    | ||||||||| |||||||||    
T  20469712 gctgactgccactgagtaact 20469692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 20565821 - 20565952
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||| ||| |||||| ||  |||| |||| |||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  20565821 gacaacaacaataacaacttgcaacataacaacataaacaacaacaactcgaatgatatgaacaacaatatttctacaacatacaacattcacataatat 20565920  T
Q  110 atgtatcttaaattatccaacatcaatattca 141  Q
    |||||| | ||||||||||||||  |||||||    
T  20565921 atgtatttcaaattatccaacatagatattca 20565952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 301 - 487
Target Start/End: Complemental strand, 25250137 - 25249953
Alignment:
Q  301 gcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcag-ttttcaacaagactcacctaattccataactctaa 399  Q
    |||||||||| |||| | ||||||||||||||||||||||||||| ||   ||||||||| ||| |||||   || ||||||| || |||||    ||||    
T  25250137 gcgaggcgaggacagctgctcgctatggcgagcgatgaatgtcagctc---gggcagaatacaggttttctcaaaaactcacccaaatccatggtcctaa 25250041  T
Q  400 ccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    |||||||||||||| || || ||||||||||||||  ||||||||| ||||||||||||||||||||| | ||| || ||||||||||    
T  25250040 ccttaaaactgattatagtcgttgttctatgaatagtctaaggtctggacactatttctacatcaatttaacaggttcctactcttaa 25249953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 301 - 487
Target Start/End: Complemental strand, 25313921 - 25313737
Alignment:
Q  301 gcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcag-ttttcaacaagactcacctaattccataactctaa 399  Q
    |||||||||| |||| | ||||||||||||||||||||||||||| ||   ||||||||| ||| |||||   || ||||||| || |||||    ||||    
T  25313921 gcgaggcgaggacagctgctcgctatggcgagcgatgaatgtcagctc---gggcagaatacaggttttctcaaaaactcacccaaatccatggtcctaa 25313825  T
Q  400 ccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    |||||||||||||| || || ||||||||||||||  ||||||||| ||||||||||||||||||||| | ||| || ||||||||||    
T  25313824 ccttaaaactgattatagtcgttgttctatgaatagtctaaggtctggacactatttctacatcaatttaacaggttcctactcttaa 25313737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 406 - 487
Target Start/End: Complemental strand, 20469383 - 20469302
Alignment:
Q  406 aactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||| | ||||||||||    
T  20469383 aactgattctaatcattgttctatgaataatctaaggtctggacactatttctacatcaattcaacagagtcctactcttaa 20469302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 32608163 - 32608055
Alignment:
Q  35 atagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatca 134  Q
    |||||||||||||| | ||  ||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  32608163 atagcaacattaataataaccacttggatgatat-aacaacattatttctatatcatacaatattcacataatatatgtatctaaaattattcaacaaca 32608065  T
Q  135 atattcatat 144  Q
    | ||||||||    
T  32608064 acattcatat 32608055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 50 - 211
Target Start/End: Complemental strand, 22357749 - 22357587
Alignment:
Q  50 acaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaat 148  Q
    |||| |||||||||||||| |||||||| |||| |||||||||||| | | |||||||||||| || ||||||||| |||||| ||  | | |||||| |    
T  22357749 acaacaacttgaatgatataaacaacaacattttctatatcatacattttccacataatatatatagcttaaattaaccaacaacatcaattatattagt 22357650  T
Q  149 tcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    | ||| |||||  | | | |||   |||| |||||||||||||||||||||||||||||||||    
T  22357649 ttagattcactgaaaagctatacctttataaacaacttccattcctaccccaaggaccaactc 22357587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 201
Target Start/End: Complemental strand, 21406489 - 21406324
Alignment:
Q  35 atagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatca 134  Q
    |||||||||||||| | ||  ||||| ||| ||| ||||||| ||||| ||||||||||||||||||| ||||||||  |||| |||||| |||||| ||    
T  21406489 atagcaacattaataataaccacttggatggtat-aacaacattatttgtatatcatacaatattcacgtaatatatacatctcaaattacccaacaaca 21406391  T
Q  135 atattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaa 201  Q
       |||||||||||||||| ||| |  |  |||||| ||||||  ||||||| ||||| ||||||||    
T  21406390 tacttcatattaattcagattcattgtaagacaatacaattatatacaactttcattcataccccaa 21406324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 282 - 423
Target Start/End: Original strand, 29915010 - 29915152
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactc- 379  Q
    |||||||||||||||||| ||||||||| |||   |||||||||||||||||||||||   || | ||||||| |||||  || ||| || ||| | |      
T  29915010 agcgatgaagatgatcactcgcgaggcgggaaggattactcgctatggcgagcgatgacgatctgctctacggacagaacacaattt-cagcaaaaattt 29915108  T
Q  380 acctaattccataactctaaccttaaaactgattctaatcattg 423  Q
    |||||||||||||| ||||||||||||||||||| |||||||||    
T  29915109 acctaattccataattctaaccttaaaactgattttaatcattg 29915152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 36509573 - 36509507
Alignment:
Q  78 tatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatat 144  Q
    |||||||||||||||| |||||||||||||||||||| || ||||||| ||||| ||| ||||||||    
T  36509573 tatttctatatcatacgatattcacataatatatgtacctcaaattattcaacaacaacattcatat 36509507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 271
Target Start/End: Complemental strand, 25250565 - 25250468
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagta 271  Q
    |||| |||||||| |||||||||||||| |||||||||  ||| |||||||||| |||||| | ||||| ||||| || || ||||||||| ||||||    
T  25250565 ttataaacaactttcattcctaccccaaagaccaactcataacatcacgtgcgacaaagattgcaagaacactaagcagggctgactgccactgagta 25250468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 271
Target Start/End: Complemental strand, 25314350 - 25314253
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagta 271  Q
    |||| |||||||| |||||||||||||| |||||||||  ||| |||||||||| |||||| | ||||| ||||| || || ||||||||| ||||||    
T  25314350 ttataaacaactttcattcctaccccaaagaccaactcataacatcacgtgcgacaaagattgcaagaacactaagcagggctgactgccactgagta 25314253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 30616449 - 30616520
Alignment:
Q  395 tctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaat 466  Q
    |||||| | |||||||||||||| ||||||||||||||||   |||||||| |||||||| |||||||||||    
T  30616449 tctaacatcaaaactgattctaaacattgttctatgaatattataaggtctggacactatctctacatcaat 30616520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 24277423 - 24277325
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaa 121  Q
    ||||| |||| ||||||| |||||| | || |||||||||| ||| |||||| |||||| |||||||||||| | | | |||||||||| |||||||||    
T  24277423 caacttgcaacatagcaatattaataataacaacttgaatggtataaacaacgatattttctatatcatacattttcctcataatatatatatcttaaa 24277325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 24384790 - 24384888
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaa 121  Q
    ||||| |||| ||||||| |||||| | || |||||||||| ||| |||||| |||||| |||||||||||| | | | |||||||||| |||||||||    
T  24384790 caacttgcaacatagcaatattaataataacaacttgaatggtataaacaacgatattttctatatcatacattttcctcataatatatatatcttaaa 24384888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 8952867 - 8952761
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| |||| |||||||||||||| |||||| | | ||||||||||||||| | | |||  ||||||| || |||||||    
T  8952867 caacttgcaacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccac--aatatatatagcttaaat 8952770  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  8952769 taaccaaca 8952761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 10953368 - 10953448
Alignment:
Q  182 aacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgcc 263  Q
    |||||||||||||| |||||||  ||||||  ||| |||||||||| |||||||| |||||  ||||||||| |||||||||    
T  10953368 aacttccattcctatcccaagg-tcaactcacaacttcacgtgcgacaaagatcgcaagaaccctaaacaagattgactgcc 10953448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 25576751 - 25576696
Alignment:
Q  181 caacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcg 236  Q
    |||| ||||||||||||||||||| ||||||  ||| |||||||||| ||||||||    
T  25576751 caacctccattcctaccccaaggatcaactcataacctcacgtgcgacaaagatcg 25576696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 8952718 - 8952681
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  8952718 ttataaacaacttccattcctaccccaatgaccaactc 8952681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 17812614 - 17812698
Alignment:
Q  7 atggacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatca 90  Q
    ||||||| |||||  | ||||| |||| ||||||| |||||| | || |||||||||||||| |||||| ||| |||||||||||    
T  17812614 atggacaacaacataagcaacttgcaacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatca 17812698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 25250709 - 25250623
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatat 109  Q
    ||||||| |||| |||||||||||||| |||| || ||| ||||||| | ||||| || |||||||||||||| || ||||||||||||    
T  25250709 aacaacttgcaacatagcaacattaataacaacaaattggatgatat-atcaacattattttctatatcatac-attttcacataatat 25250623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 25314494 - 25314408
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatat 109  Q
    ||||||| |||| |||||||||||||| |||| || ||| ||||||| | ||||| || |||||||||||||| || ||||||||||||    
T  25314494 aacaacttgcaacatagcaacattaataacaacaaattggatgatat-atcaacattattttctatatcatac-attttcacataatat 25314408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 189 - 257
Target Start/End: Complemental strand, 25574357 - 25574290
Alignment:
Q  189 attcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttg 257  Q
    |||||||||||||||| ||||||  ||| |||||||||| |||||||| || ||  |||||||||||||    
T  25574357 attcctaccccaaggatcaactcataacctcacgtgcgacaaagatcgcaa-aaccctaaacaaggttg 25574290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 189 - 257
Target Start/End: Complemental strand, 25575550 - 25575483
Alignment:
Q  189 attcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttg 257  Q
    |||||||||||||||| ||||||  ||| |||||||||| |||||||| || ||  |||||||||||||    
T  25575550 attcctaccccaaggatcaactcataacctcacgtgcgacaaagatcgcaa-aaccctaaacaaggttg 25575483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 282 - 498
Target Start/End: Original strand, 108017 - 108229
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactca 380  Q
    |||||||||||||||||| |||||||||| ||| |||||||||    |||||||||||||||||||| |||||||| ||||||||||||   || |||||    
T  108017 agcgatgaagatgatcactcgcgaggcgaaaactgttactcgc----gcgagcgatgaatgtcagttatacgggcataatgcagttttcccaaaaactca 108112  T
Q  381 cctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttcta 480  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||| |||||    
T  108113 cctaattccataactctaaccttaaaactgattttaatcattgttctatgaataatctaaggtctggacactatttctacatcaattcaacaga-ttcta 108211  T
Q  481 ctcttaaatcaaccaatt 498  Q
    ||||||||||||||||||    
T  108212 ctcttaaatcaaccaatt 108229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 136; Significance: 1e-70; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 282 - 500
Target Start/End: Original strand, 23501392 - 23501611
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactca 380  Q
    |||||||||||| ||| | |||||||||||||  ||| ||| |||||||||||||||||||||||||||||||||||||| || |||||| ||| | |||    
T  23501392 agcgatgaagatcatcgctcgcgaggcgagaagtgttgctcactatggcgagcgatgaatgtcagttctacgggcagaatacaattttcagcaaaattca 23501491  T
Q  381 cctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttcta 480  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||  |||||||||    
T  23501492 cctaattccatgactctaaccttaaaactgattctaatcattgttatatgaataatctaaggtctggacactatttctacatcaattcaatagatttcta 23501591  T
Q  481 ctcttaaatcaaccaattac 500  Q
    || |||||||||| ||||||    
T  23501592 cttttaaatcaacaaattac 23501611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 50 - 274
Target Start/End: Original strand, 23500888 - 23501112
Alignment:
Q  50 acaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaatt 149  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||    
T  23500888 acaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatataagtatctcaaattatccaacaacaatattcatattaatt 23500987  T
Q  150 cagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaa 249  Q
    |||  |||||  |  ||| |  || ||| || ||||| || ||||||||||||||||||||| |||||| |||||||| | |||||| |||||  |||||    
T  23500988 caggatcactgaaagacagtccaactataaataactttcactcctaccccaaggaccaactcagaacgttacgtgcgacagagatcgcaagaaccctaaa 23501087  T
Q  250 caaggttgactgccagtgagtaact 274  Q
    ||||||||||||||| |||||||||    
T  23501088 caaggttgactgccactgagtaact 23501112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 282 - 487
Target Start/End: Complemental strand, 31732235 - 31732031
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaaga-ctc 379  Q
    |||||||| ||| ||||| |||||||||||| ||| ||||||||||||||||||||||||||||| ||   ||||||||||||||||||| ||| | |||    
T  31732235 agcgatgaggatcatcactcgcgaggcgagagcagctactcgctatggcgagcgatgaatgtcagctc---gggcagaatgcagttttcaccaaaaactc 31732139  T
Q  380 acctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttct 479  Q
    ||||||||||| |||||||||| |||||||||| |||||||||||||||||||| | ||||||||| ||||||||||||||||||||||| || ||| ||    
T  31732138 acctaattccacaactctaaccataaaactgatactaatcattgttctatgaatgatctaaggtctggacactatttctacatcaattcaacatattcct 31732039  T
Q  480 actcttaa 487  Q
    ||||||||    
T  31732038 actcttaa 31732031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 10 - 274
Target Start/End: Complemental strand, 6083617 - 6083355
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| ||||||||||| || ||||  ||||||| ||||  |||| || |||||||||||||||||||||  ||||| | |||||||||||||||||||||    
T  6083617 gacagcaacaataacatcttgcaacttagcaactttaacaacaacaatttgaatgatatgaacaacaat--ttctacaacatacaatattcacataatat 6083520  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaac 209  Q
    ||| || | || |||||||||| || |||||| ||||||||||||||| |  |  | |||| |||||| |||||||| ||||||||||| || |||||||    
T  6083519 atgcatttcaatttatccaacaacattattcagattaattcagactcattgaaagataatacaattataaacaactttcattcctaccctaaagaccaac 6083420  T
Q  210 tcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    || ||||| ||||||||| ||||| || ||||| ||||| ||||||||||||||| |||||||||    
T  6083419 tcagaacgacacgtgcgacaaagaacgcaagaacactaagcaaggttgactgccattgagtaact 6083355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 22 - 242
Target Start/End: Complemental strand, 31735742 - 31735522
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| | || |||||||||||||| | || || ||||||||||| ||||||||||||| |||||||| ||| | | |||||||||||||||| | ||    
T  31735742 aacaacttgtaacatagcaacattaataataacaatttgaatgatataaacaacaatattttctatatcaaacattttccacataatatatgtatttcaa 31735643  T
Q  121 attatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtca 220  Q
    |||| |||||| || || |||| ||||||||||||||||  || ||||||||||||| |||||||| |||||||||||||| ||||||||| |||| |||    
T  31735642 attaaccaacaacattaatcattttaattcagactcactgaaccacaatataattataaacaactt-cattcctaccccaaagaccaactcagaacatca 31735544  T
Q  221 cgtgcgaaaaagatcgtaagaa 242  Q
    ||||||| |||||||| |||||    
T  31735543 cgtgcgacaaagatcgcaagaa 31735522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 10 - 159
Target Start/End: Complemental strand, 23492146 - 23491997
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||  ||| |||||||||   ||| |||||||||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  23492146 gacagcaacaataacaacttgcatcataacaacattaaaagcaacaacttgaatgatatgaacaacactctttttatatcatacaatattcacataatat 23492047  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcact 159  Q
    |||||||| ||||||| ||||| ||| |||||||||||||||||||||||    
T  23492046 atgtatctcaaattattcaacaacaaaattcatattaattcagactcact 23491997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 10 - 159
Target Start/End: Complemental strand, 23497744 - 23497595
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||  ||| |||||||||   ||| |||||||||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  23497744 gacagcaacaataacaacttgcatcataacaacattaaaagcaacaacttgaatgatatgaacaacactctttttatatcatacaatattcacataatat 23497645  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcact 159  Q
    |||||||| ||||||| ||||| ||| |||||||||||||||||||||||    
T  23497644 atgtatctcaaattattcaacaacaacattcatattaattcagactcact 23497595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 19656014 - 19655893
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||  ||| ||| |||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19656014 gacagcaacaataacaacttgcatcataacaatattaacagcaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 19655915  T
Q  110 atgtatcttaaattatccaaca 131  Q
    ||||||||  ||||||||||||    
T  19655914 atgtatctcgaattatccaaca 19655893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 282 - 467
Target Start/End: Complemental strand, 24550497 - 24550313
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaa-tgcagttttcaacaagactc 379  Q
    |||||||||| | ||||| |||||||||||| ||  | ||||||||||||||||||||||| ||| ||   |||||||| ||||| |||   ||| ||||    
T  24550497 agcgatgaagttcatcactcgcgaggcgagatcatctgctcgctatggcgagcgatgaatgacagctc---gggcagaagtgcagattttctcaaaactc 24550401  T
Q  380 acctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaatt 467  Q
    | | ||||| ||   ||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||| ||||||||||    
T  24550400 atccaattcaatggttctaaccttaaaactgattctaatcattgttctatgaatagtctaaggtcttgacactatttttacatcaatt 24550313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 208
Target Start/End: Complemental strand, 22212327 - 22212139
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||| | | |||||| ||| | || |||||||||||||| ||||| | ||||| |||||||||||||| |||||||||||||||||||| ||    
T  22212327 aacaacttgcaacacaacaacatcaataataacaacttgaatgatataaacaaaattattttctatatcatacaattttcacataatatatgtatctcaa 22212228  T
Q  121 attatccaacatcaatattcatatta-attcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaa 208  Q
    |||| |||||| || |||||||||||  ||||||||||||  |  |||||  |||||| ||| |||| |||||||||||||| ||||||    
T  22212227 attaaccaacaacattattcatattactttcagactcactgtaagacaatgcaattataaacgactttcattcctaccccaaagaccaa 22212139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 23491951 - 23491835
Alignment:
Q  15 caacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgta 114  Q
    ||||||||||||||  ||  ||| |||||||||   ||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  23491951 caacaataacaactttcatcataacaacattaacatcaacaacttgaatgatatgaaaaataatatttctatatcatacaatattcacataatatatgta 23491852  T
Q  115 tcttaaattatccaaca 131  Q
    ||| ||||||| |||||    
T  23491851 tctcaaattattcaaca 23491835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 23497549 - 23497433
Alignment:
Q  15 caacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgta 114  Q
    ||||||||||||||  ||  ||| |||||||||   ||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  23497549 caacaataacaactttcatcataacaacattaacatcaacaacttgaatgatatgaaaaataatatttctatatcatacaatattcacataatatatgta 23497450  T
Q  115 tcttaaattatccaaca 131  Q
    ||| ||||||| |||||    
T  23497449 tctcaaattattcaaca 23497433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 15705339 - 15705265
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattca 141  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||  ||||||||    
T  15705339 atgaacaacaatatttttatatcatacaatattcacataatatatgtatctcaaattattcaacaaaaatattca 15705265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 22806160 - 22806221
Alignment:
Q  70 aacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22806160 aacaacattatttctatatcatacaatattcacataatatatgtatcttaaattattcaaca 22806221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 19773437 - 19773373
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  19773437 atgaacaacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaaca 19773373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 141
Target Start/End: Original strand, 28947663 - 28947742
Alignment:
Q  62 atgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattca 141  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||||||| | |||||||||||||  ||||||||    
T  28947663 atgatatgaacaacaatatttctacagcatacaacattcacataatatatgtatttcaaattatccaacaaaaatattca 28947742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 70 - 144
Target Start/End: Original strand, 23655665 - 23655739
Alignment:
Q  70 aacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatat 144  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||| ||||| ||| ||||||||    
T  23655665 aacaacattatttctatatcatacaatattcacataatatatgtacctcaaaatattcaacaacaacattcatat 23655739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 19444099 - 19443991
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| |||| |||||||||||||| |||||| ||| ||||||||||||||| | | |||||||||||| || ||| |||    
T  19444099 caacttgcaacatagcaatattaataacaacaacttgaatgatataaacaacgatattttctatatcatacattttccacataatatatatagcttgaat 19444000  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  19443999 taaccaaca 19443991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 13751171 - 13751063
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| | || ||||||||||| || |||||| |||||| |||||||||||| | | |||||||||||| || |||||||    
T  13751171 caacttgcaacatagcaatattaataataacaacttgaatgaaataaacaacgatattttctatatcatacattttccacataatatatatagcttaaat 13751072  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  13751071 taaccaaca 13751063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 16133483 - 16133381
Alignment:
Q  30 gcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaattatcca 128  Q
    |||| ||||||| |||||| |||| |||||||||||||| |||||| | | ||||||||||||||| | | |||||||||||| || ||| ||||| |||    
T  16133483 gcaacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccacataatatatatagcttgaattaacca 16133384  T
Q  129 aca 131  Q
    |||    
T  16133383 aca 16133381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 18658447 - 18658549
Alignment:
Q  30 gcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaattatcca 128  Q
    |||| ||||||| |||||| | || |||||||||||||| |||||| ||| ||||||||||||||| | | |||||||||||  ||||||||| || |||    
T  18658447 gcaacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacataatataaatatcttaaactagcca 18658546  T
Q  129 aca 131  Q
    |||    
T  18658547 aca 18658549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 466
Target Start/End: Original strand, 20177839 - 20177901
Alignment:
Q  404 aaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaat 466  Q
    ||||||| ||||||||||||| |||||||||| |||||||||  ||||| |||||||||||||    
T  20177839 aaaactggttctaatcattgtactatgaataatctaaggtctgaacactgtttctacatcaat 20177901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 466
Target Start/End: Complemental strand, 22158152 - 22158090
Alignment:
Q  404 aaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaat 466  Q
    ||||||| ||||||||||||| |||||||||| |||||||||  ||||| |||||||||||||    
T  22158152 aaaactggttctaatcattgtactatgaataatctaaggtctgaacactgtttctacatcaat 22158090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 274
Target Start/End: Complemental strand, 22376605 - 22376480
Alignment:
Q  149 tcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaa 248  Q
    |||||||| ||  |||||||||  ||| | |||||||  ||||||||||||||||||||||||  ||| ||  |||||| |||||||| |||||  ||||    
T  22376605 tcagactctctgaacaacaataatattttaaacaactctcattcctaccccaaggaccaactcataacatcttgtgcgacaaagatcgcaagaaccctaa 22376506  T
Q  249 acaaggttgactgccagtgagtaact 274  Q
    ||||| | | |||||| |||||||||    
T  22376505 acaagatagtctgccactgagtaact 22376480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 211
Target Start/End: Original strand, 24267000 - 24267188
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttct-atatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||| ||| |||||| |||| |||||||||||||| |||||  | |||| | |||||||||| | |||||||||||||| || |||||||    
T  24267000 caacttgcaacataacaatattaataacaacaacttgaatgatataaacaaggacattttttatatcatacatttttcacataatatatatagcttaaat 24267099  T
Q  123 tatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    || |||||| ||  | | ||||||  | ||| |||||  |     |||   |||| |||||||||||||||||||||||||||||||||    
T  24267100 taaccaacaacatcaattatattagcttagattcactgaaaggttatacctttataaacaacttccattcctaccccaaggaccaactc 24267188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 29848322 - 29848224
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaa 121  Q
    ||||| |||| ||||||| |||||| | || |||||||||||||| |||||||||| ||||||||||| ||| | | | |||||||||  |||||||||    
T  29848322 caacttgcaacatagcaatattaataataacaacttgaatgatataaacaacaatattttctatatcacacattttcctcataatataaatatcttaaa 29848224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 610975 - 611071
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatctta 119  Q
    ||||| |||| ||||||| |||||| | || |||||||||||||| |||||| ||| ||||||||||||||| | | | |||||||||  |||||||    
T  610975 caacttgcaacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttcctcataatataaatatctta 611071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 253
Target Start/End: Complemental strand, 20078102 - 20077998
Alignment:
Q  149 tcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaa 248  Q
    |||||||||||  ||| | |||  ||||| | |||| ||||||||||||||||||| ||||||  ||| || ||||||| |||||||| |||||  ||||    
T  20078102 tcagactcactgaacatcgatagtattataatcaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaagaaccctaa 20078003  T
Q  249 acaag 253  Q
    |||||    
T  20078002 acaag 20077998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 17318825 - 17318786
Alignment:
Q  92 acaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  17318825 acaatattcacataatatatgtatttcaaattatccaaca 17318786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 8226938 - 8226873
Alignment:
Q  404 aaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattca 469  Q
    ||||||| ||||||||||||| ||||||| || ||||||| |  ||||||||||| ||| ||||||    
T  8226938 aaaactggttctaatcattgtactatgaacaatctaaggtatgaacactatttcttcattaattca 8226873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 23532094 - 23532029
Alignment:
Q  404 aaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattca 469  Q
    ||||||| ||||||||||||| ||||||| || ||||||| |  ||||||||||| ||| ||||||    
T  23532094 aaaactggttctaatcattgtactatgaacaatctaaggtatgaacactatttcttcattaattca 23532029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 24550939 - 24550851
Alignment:
Q  182 aacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagta 271  Q
    |||||||||  |||||||||| | ||||||  ||| ||| | |||| |||||||| |||||  |||||||||||||||||||| ||||||    
T  24550939 aacttccatctctaccccaag-atcaactctcaacatcatgcgcgacaaagatcgcaagaaccctaaacaaggttgactgccactgagta 24550851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 19829780 - 19829700
Alignment:
Q  15 caacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaat-atttctatatcataca 94  Q
    |||||| |||| || |||| |||||||||| ||| | |  |||||||||||||| ||||| ||| ||||||||||||||||    
T  19829780 caacaacaacatcttgcaacatagcaacatcaataatatcaacttgaatgatataaacaataataatttctatatcataca 19829700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 23655727 - 23655779
Alignment:
Q  92 acaatattcacataatatatgtatcttaaattatccaacatcaatattcatat 144  Q
    |||| ||||| ||||||||||||| ||||||||| ||||| ||| ||||||||    
T  23655727 acaacattcatataatatatgtattttaaattattcaacaacaacattcatat 23655779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 480
Target Start/End: Original strand, 25753282 - 25753358
Alignment:
Q  404 aaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttcta 480  Q
    ||||||| ||||||||||||| |||| || || ||| |||||||||| | ||||| ||| |||||| ||| ||||||    
T  25753282 aaaactggttctaatcattgtactataaacaatctacggtctagacattgtttcttcattaattcaacaggtttcta 25753358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 480
Target Start/End: Original strand, 25755452 - 25755528
Alignment:
Q  404 aaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttcta 480  Q
    ||||||| ||||||||||||| |||| || || ||| |||||||||| | ||||| ||| |||||| ||| ||||||    
T  25755452 aaaactggttctaatcattgtactataaacaatctacggtctagacattgtttcttcattaattcaacaggtttcta 25755528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 129; Significance: 1e-66; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 22 - 274
Target Start/End: Complemental strand, 20843 - 20591
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaa 121  Q
    ||||||| |||| ||| ||||||| |  ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||    
T  20843 aacaacttgcaacataacaacattgacaacaataacttgaatgatatgaacgacaatatttctatatcatacaattttcacataatatatgtatctcaaa 20744  T
Q  122 ttatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcac 221  Q
    |||||||||  ||||| |||||||||||||||||||||  |  |||||  |||||| |||||||| |||||||||||||| ||||||||| |||| |||     
T  20743 ttatccaactacaataatcatattaattcagactcactgaaagacaatgcaattataaacaactttcattcctaccccaaagaccaactcagaacatcat 20644  T
Q  222 gtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    |||||| |||||||| ||||| |||||| |||  ||||||||| |||||||||    
T  20643 gtgcgacaaagatcgcaagaacactaaataagcctgactgccactgagtaact 20591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 347 - 496
Target Start/End: Complemental strand, 20348 - 20202
Alignment:
Q  347 tctacgggcagaatgcagttttcaacaagactcacctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtcta 446  Q
    |||||||||||||  ||| ||||| ||| |||| || ||||||||| ||||||||  |||||||||||||||||||||||||||||| | ||||   |||    
T  20348 tctacgggcagaactcaggtttcagcaaaactctcccaattccatatctctaaccccaaaactgattctaatcattgttctatgaatcatctaa---cta 20252  T
Q  447 gacactatttctacatcaattcatcagatttctactcttaaatcaaccaa 496  Q
     ||||||||| ||||| |||||| ||||||||||||||||||||||||||    
T  20251 aacactatttatacattaattcaacagatttctactcttaaatcaaccaa 20202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 121; Significance: 9e-62; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 20 - 264
Target Start/End: Complemental strand, 3909 - 3665
Alignment:
Q  20 ataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatctta 119  Q
    |||| |||| |||| ||| |||||||||  |||| ||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |    
T  3909 ataataacttgcaacataacaacattaacaacaacaacctgaatgatatgaacaacaatatttctatatcatatattattcacataatatatgtatctca 3810  T
Q  120 aattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtc 219  Q
    |||||||||||| || | |||||||||||||||| |||||  |  |||||| | || | ||| |||| |||||||||||||| ||||||||| |||||||    
T  3809 aattatccaacaacattcttcatattaattcagattcactgaaagacaatacatttgtaaacgactttcattcctaccccaaagaccaactcagaacgtc 3710  T
Q  220 acgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgcca 264  Q
    |||||||| |||||||| ||||| ||||||||||| |||||||||    
T  3709 acgtgcgacaaagatcgcaagaacactaaacaaggctgactgcca 3665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 394 - 500
Target Start/End: Complemental strand, 3269 - 3164
Alignment:
Q  394 ctctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaaatcaac 493  Q
    |||||||| ||||| | |||||||||||||| |||||||||  ||||||| |  ||||  |||||||||||||||| |||||||||||  || |||||||    
T  3269 ctctaaccctaaaatt-attctaatcattgtactatgaatactctaaggtttgtacacagtttctacatcaattcaacagatttctaccatttaatcaac 3171  T
Q  494 caattac 500  Q
    |||||||    
T  3170 caattac 3164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 116; Significance: 8e-59; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 300 - 487
Target Start/End: Original strand, 109914 - 110100
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactcacctaattccataactctaa 399  Q
    ||||||||||||  | |||||||||| |||||| |||||||||||| ||||||||||||||||||||||||  || ||||||||| ||||| ||| ||||    
T  109914 cgcgaggcgagaggaattactcgcta-ggcgagtgatgaatgtcagctctacgggcagaatgcagttttcacaaaaactcacctatttccacaaccctaa 110012  T
Q  400 ccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||| |||||| ||||||||||    
T  110013 ccttaaaactgattctaatcattgttctatgaataacctaaggtttggacattatttctacatcaattcaacagattcctactcttaa 110100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 55 - 274
Target Start/End: Original strand, 109431 - 109650
Alignment:
Q  55 aacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaattcagac 154  Q
    |||||||||||||||||||  ||||| |||| |||||||||| | |||||||||||||||||| |||||| |||||| || || |||| |||||||||||    
T  109431 aacttgaatgatatgaacattaatatctctacatcatacaatttccacataatatatgtatctcaaattaaccaacaacattaatcattttaattcagac 109530  T
Q  155 tcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaagg 254  Q
    || ||  |   | |||   |||| ||||||||||||| ||||||||| | |||||||  ||| ||||||| || |||||||| |||||  ||||  ||||    
T  109531 tctctgtaaggctatacctttataaacaacttccatttctaccccaaaggccaactcataacatcacgtgtgacaaagatcgcaagaaccctaagtaagg 109630  T
Q  255 ttgactgccagtgagtaact 274  Q
     ||||||||| |||||||||    
T  109631 ctgactgccactgagtaact 109650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 59576 - 59686
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||| ||| |||| ||||| | || |||| ||||||||| || |||||||||| |||||||||||| | | ||||||||||||||| ||| |    
T  59576 aacaacttgcaacataacaacgttaataataacaactcgaatgatataaaaaacaatattttctatatcatacattttccacataatatatgtagcttga 59675  T
Q  121 attatccaaca 131  Q
    |||| ||||||    
T  59676 attaaccaaca 59686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 59733 - 59770
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  59733 ttataaacaacttccattcctaccccaagaaccaactc 59770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 113; Significance: 5e-57; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 22 - 274
Target Start/End: Original strand, 66244 - 66496
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaa 121  Q
    ||||||| |||| ||| |||||||||| | || ||||| |||||||||||||||||||||||||||||||||||| | ||||| |||||||||||| |||    
T  66244 aacaacttgcaacataacaacattaataataacaactttaatgatatgaacaacaatatttctatatcatacaatttccacatcatatatgtatctcaaa 66343  T
Q  122 ttatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcac 221  Q
    ||| |||||| ||||| |||||||||||||||||||||  |  |  |||   |||| |||||||| |||||||||||||| ||||||||| |||| ||||    
T  66344 ttaaccaacaacaataatcatattaattcagactcactgaaagattatacttttataaacaactttcattcctaccccaaagaccaactcagaacatcac 66443  T
Q  222 gtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    |||||| |||||||| ||||| |||||  |||| ||||||||| |||||||||    
T  66444 gtgcgacaaagatcgcaagaacactaagtaaggctgactgccactgagtaact 66496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 282 - 498
Target Start/End: Original strand, 66841 - 67057
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactc- 379  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||  ||| | |||||||||||||  |||||| ||  || | ||     
T  66841 agcgatgaagatgatcactcgcgaggcgagagcagttactcgctatggcgagcgatgacggtctgctctacgggcagaacacagttt-cattaaaaatcc 66939  T
Q  380 acctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttct 479  Q
    | ||||||| ||||||  |||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| || | || |    
T  66940 atctaattcaataacttcaaccttaaaactaattctaatcgttgttctatgaataatctaaggtctagacactatttctacatcaattcaaca-aattat 67038  T
Q  480 actcttaaatcaaccaatt 498  Q
    ||||||||| |||||||||    
T  67039 actcttaaaccaaccaatt 67057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 1e-48; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 282 - 498
Target Start/End: Original strand, 13302625 - 13302841
Alignment:
Q  282 agcgatgaagatgatcacc-gcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactc- 379  Q
    ||||||||||||||||||  ||||||| | | ||||||||||||||||||||||||||   || | |||||||||||||  |||||| || ||| | ||     
T  13302625 agcgatgaagatgatcacttgcgaggcaatagcagttactcgctatggcgagcgatgacgatctgctctacgggcagaacacagttt-cagcaaaaatcc 13302723  T
Q  380 acctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttct 479  Q
    |  |||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || | ||||    
T  13302724 atttaattccataactccaaccttaatactgattctaatcattgttctatgaataatctaaggtctggacactatttctacatcaattcaaca-aattct 13302822  T
Q  480 actcttaaatcaaccaatt 498  Q
    |||||||||||||||||||    
T  13302823 actcttaaatcaaccaatt 13302841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 55 - 274
Target Start/End: Original strand, 13302053 - 13302272
Alignment:
Q  55 aacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaattcagac 154  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||  |||| ||||||  ||||| ||| | ||||||||||||||||    
T  13302053 aacttgaatgatatgaacaacaatatttctatatcatacaatttccacataatatatagatctcaaattaaacaacaacaacaatcatattaattcagac 13302152  T
Q  155 tcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaagg 254  Q
    |||||  |  || ||| | |||| | |||||||||||| |||||||| ||||||||| |||  ||| |||||| |||||||| ||||| |||||  ||||    
T  13302153 tcactgaaagactatacatttataatcaacttccattcataccccaaagaccaactcagaaaatcaagtgcgacaaagatcgcaagaacactaagtaagg 13302252  T
Q  255 ttgactgccagtgagtaact 274  Q
     ||||||||| |||||||||    
T  13302253 ctgactgccactgagtaact 13302272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 283 - 487
Target Start/End: Original strand, 45755244 - 45755447
Alignment:
Q  283 gcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcag-ttttcaacaagactca 380  Q
    ||||||||| | ||||| ||| |||||||| ||| |||||| |||||||||||||||||||||| ||   ||||||||||||| |||||   || |||||    
T  45755244 gcgatgaagttcatcactcgctaggcgagatcagctactcgttatggcgagcgatgaatgtcagctc---gggcagaatgcagattttctcaaaaactca 45755340  T
Q  381 cctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttcta 480  Q
    |  || |||||   ||||||| ||||||||||||||||||||||||||| ||||  |||| |||| ||||||||||||||||||||||| || ||| |||    
T  45755341 ctcaaatccatggttctaaccgtaaaactgattctaatcattgttctattaatagtctaaagtctggacactatttctacatcaattcaacaaattccta 45755440  T
Q  481 ctcttaa 487  Q
    |||||||    
T  45755441 ctcttaa 45755447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 392 - 500
Target Start/End: Complemental strand, 7320814 - 7320706
Alignment:
Q  392 aactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaaatca 491  Q
    ||||| |||| |||||||||||||||||||||| |||||||||| |||||||||  ||||| |||||||||||||||| || ||||||||| ||||||||    
T  7320814 aactcaaaccctaaaactgattctaatcattgtactatgaataatctaaggtctgaacactgtttctacatcaattcaacaaatttctactattaaatca 7320715  T
Q  492 accaattac 500  Q
    |||||||||    
T  7320714 accaattac 7320706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 300 - 487
Target Start/End: Original strand, 24727124 - 24727309
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaat-gcagttttcaacaagactcacctaattccataactcta 398  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||| ||   ||||||||| |||  |||   ||| ||||| | ||||| ||   |||     
T  24727124 cgcgaggcgagatcagttactcgctatggcgagcaatgaatgtcagctc---gggcagaattgcaaattttctcaaaactcatcaaattcaatggttctg 24727220  T
Q  399 accttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    || |||||||||| ||||||||||||||||||||||  ||||||||| ||||||| ||||||||||||| | |||||| ||||||||||    
T  24727221 actttaaaactgactctaatcattgttctatgaatagtctaaggtctggacactaattctacatcaatttaacagattcctactcttaa 24727309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 467
Target Start/End: Original strand, 42697506 - 42697690
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcag-ttttcaacaagactc 379  Q
    |||||||||| | ||||| |||||||||||| ||||||||||||| || |||||||||||||||| ||   ||| ||||||||| |||||   || ||||    
T  42697506 agcgatgaagttcatcactcgcgaggcgagatcagttactcgctaaggggagcgatgaatgtcagctc---gggtagaatgcagattttctcaaaaactc 42697602  T
Q  380 acctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaatt 467  Q
    | | |||| |||   ||||||  ||||||||||||||||||||||| ||||||||  ||||||| | ||||||| |||||||||||||    
T  42697603 atccaatttcatggttctaactataaaactgattctaatcattgttttatgaatagtctaaggtatggacactaattctacatcaatt 42697690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 211
Target Start/End: Original strand, 52983366 - 52983568
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataata 108  Q
    ||||||||||  | ||||| |||| ||| |||||||||| | || |||||||||||||| |||||| |||||| |||||||||||| | | |||||||||    
T  52983366 gacatcaacataagcaacttgcaacataacaacattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacataata 52983465  T
Q  109 tatgtatcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaa 208  Q
    |||||| ||||||||| |||||| ||  | | ||||||  | ||| ||| |  | | | |||   |||| ||||||||||||||||||||||||||||||    
T  52983466 tatgtagcttaaattaaccaacaacatcaattatattagcttagattcagtgaaaagctatacctttataaacaacttccattcctaccccaaggaccaa 52983565  T
Q  209 ctc 211  Q
    |||    
T  52983566 ctc 52983568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 38887926 - 38887818
Alignment:
Q  35 atagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatca 134  Q
    |||||||||||||| | ||  ||||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||||||| || ||||||| ||||| ||    
T  38887926 atagcaacattaataataaccacttggatggtat-aacaacattatttctatatcatacaatattcacataatatatgtacctcaaattattcaacaaca 38887828  T
Q  135 atattcatat 144  Q
    | ||||||||    
T  38887827 acattcatat 38887818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 21240069 - 21239949
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaa-tatttctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||| ||| |||||| ||  | || ||||||||||||||||||||||| |||||||| | ||||||| ||||||||||||||||||| | ||    
T  21240069 aacaacttgcaacataacaacatcaacaataacaacttgaatgatatgaacaacaaatatttctacaacatacaacattcacataatatatgtatttcaa 21239970  T
Q  121 attatccaacatcaatattca 141  Q
    |||||||||||  ||||||||    
T  21239969 attatccaacaaaaatattca 21239949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 14238377 - 14238306
Alignment:
Q  70 aacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattca 141  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||    
T  14238377 aacaacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaacattca 14238306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 131
Target Start/End: Original strand, 18275135 - 18275258
Alignment:
Q  9 ggacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataat 107  Q
    ||||| |||||  ||||||| |||| |||||||| ||||| | || |||||||||||||| |||||||||| ||||||||||||||| | | ||||||||    
T  18275135 ggacaacaacataaacaacttgcaacatagcaacgttaataataacaacttgaatgatataaacaacaatattttctatatcatacattttccacataat 18275234  T
Q  108 atatgtatcttaaattatccaaca 131  Q
    ||||||| ||| ||||| ||||||    
T  18275235 atatgtagcttgaattaaccaaca 18275258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 51082503 - 51082574
Alignment:
Q  70 aacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattca 141  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||    
T  51082503 aacaacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaacattca 51082574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 51336334 - 51336405
Alignment:
Q  395 tctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaat 466  Q
    |||||||| |||||||||||||| ||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  51336334 tctaacctcaaaactgattctaaacattgttctatgaatagtctaaggtctggacactatttctacatcaat 51336405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 35 - 141
Target Start/End: Complemental strand, 7052854 - 7052749
Alignment:
Q  35 atagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatca 134  Q
    |||||||||||||| | ||  ||||| ||| ||| ||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||| ||||| ||    
T  7052854 atagcaacattaataataaccacttggatggtat-aacaacattatttctatatcatacaatattcacctaatatatgtatctcaaattattcaacaaca 7052756  T
Q  135 atattca 141  Q
    | |||||    
T  7052755 acattca 7052749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 22 - 159
Target Start/End: Original strand, 51476209 - 51476347
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatt-tctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||| |||||||||||||| | || ||||||||| |||| ||||||  |||| ||||||||||||| | | ||||||||||||||| |||||    
T  51476209 aacaacttgcaacatagcaacattaataataacaacttgaataatataaacaacggtattatctatatcatacattttccacataatatatgtagcttaa 51476308  T
Q  121 attatccaacatcaatattcatattaattcagactcact 159  Q
    |||| |||||| || || |||||||| || ||| |||||    
T  51476309 attaaccaacaacattaatcatattagtttagattcact 51476347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 51323582 - 51323663
Alignment:
Q  50 acaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||| ||||| ||||||||||||| ||||||||||| | ||||||  ||||||||||||||||||| | |||||||||||||    
T  51323582 acaacaacttaaatgatatgaacatcaatatttctacaacatacatcattcacataatatatgtatttcaaattatccaaca 51323663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 395 - 466
Target Start/End: Complemental strand, 12327960 - 12327889
Alignment:
Q  395 tctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaat 466  Q
    |||||||| |||||||||||||| ||||||||| ||||||  ||||||||| || |||||||||||||||||    
T  12327960 tctaacctcaaaactgattctaaacattgttctctgaatagtctaaggtctggatactatttctacatcaat 12327889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 13528611 - 13528503
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| |||| |||||||||||||| |||||| | | ||||||||||||||| | | |||||||||||| || ||| |||    
T  13528611 caacttgcaacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccacataatatatatagcttgaat 13528512  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  13528511 taaccaaca 13528503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 45754850 - 45754941
Alignment:
Q  179 aacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagta 271  Q
    ||||||||||||||||| |||||| | ||||||  ||| |||| ||||| |||||||| |||||  |||||||||||||||||||| ||||||    
T  45754850 aacaacttccattcctatcccaag-atcaactcacaacatcacatgcgacaaagatcgcaagaaccctaaacaaggttgactgccactgagta 45754941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 42697105 - 42697179
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaa 248  Q
    |||| |||||||||||||||||||||||||| ||||||  ||| | |||||| |||||||||| ||||| |||||    
T  42697105 ttataaacaacttccattcctaccccaaggatcaactcataacataacgtgcaaaaaagatcgcaagaacactaa 42697179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 18823841 - 18823949
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||| ||| |||||| |||| |||||||||||||| |||||| | | ||||||||||||| | | | |||||||||||| || |||||||    
T  18823841 caacttgcaacataacaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatatattttccacataatatatatagcttaaat 18823940  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  18823941 taaccaaca 18823949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 7321554 - 7321491
Alignment:
Q  89 catacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaattcag 152  Q
    |||| |||||||||||||||||||||| | || ||||| |||  ||||||||||||||||||||    
T  7321554 catataatattcacataatatatgtatttcaatttatctaacgacaatattcatattaattcag 7321491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 131
Target Start/End: Original strand, 18270481 - 18270604
Alignment:
Q  9 ggacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataat 107  Q
    ||||| |||||  ||||||| |||| ||| |||| | ||| | || |||| ||||||||| || |||||||||| |||||||||||| | | ||||||||    
T  18270481 ggacaacaacataaacaacttgcaacataacaacgtaaataataacaactagaatgatataaaaaacaatattttctatatcatacattttccacataat 18270580  T
Q  108 atatgtatcttaaattatccaaca 131  Q
    ||||||| ||| ||||| ||||||    
T  18270581 atatgtagcttgaattaaccaaca 18270604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 13528456 - 13528419
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||| |||||||||||||||||||||||||||||||||    
T  13528456 ttataaacaacttccattcctaccccaaggaccaactc 13528419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 21181142 - 21181045
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||| |||| ||||||| |||||| | || |||||||||||||| |||||| ||| ||||||||||||| | | ||| |||||||||  ||||||||    
T  21181142 caacttgcaacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatatatttttctcataatataaatatcttaa 21181045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 7792669 - 7792561
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| | || ||||||||||||||  ||||| ||| ||||||||||||||| | | | |||||||||  |||||||||     
T  7792669 caacttgcaacatagcaatattaataataacaacttgaatgatatttacaacgatattttctatatcatacattttcctcataatataaatatcttaaac 7792570  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  7792569 taaccaaca 7792561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 4596548 - 4596509
Alignment:
Q  92 acaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  4596548 acaatattcacataatatatgtatttcaaattatccaaca 4596509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 264
Target Start/End: Complemental strand, 12328517 - 12328432
Alignment:
Q  179 aacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcga-aaaagatcgtaagaaaactaaacaaggttgactgcca 264  Q
    ||||||||| |||| ||||||||||  | ||||  ||| |||||||||| ||||||||| |||||| ||||||||||||| ||||||    
T  12328517 aacaacttc-attcataccccaagggtcgactcataacatcacgtgcgacaaaagatcgcaagaaacctaaacaaggttgtctgcca 12328432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 22124517 - 22124583
Alignment:
Q  188 cattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaagg 254  Q
    ||||||||||||||||| ||||||  ||| |||||||||| || ||||| |||||  ||||||||||    
T  22124517 cattcctaccccaaggatcaactcataacctcacgtgcgacaaggatcgcaagaaccctaaacaagg 22124583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 42696954 - 42697046
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtat 115  Q
    ||||||| ||||  ||||||||||||| |||| | |||| ||||||| ||||||| || ||||||||||||||  | ||||||||||||||||||    
T  42696954 aacaacttgcaacgtagcaacattaataacaacatcttggatgatat-aacaacattattttctatatcatac-cttttcacataatatatgtat 42697046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 500
Target Start/End: Complemental strand, 8276139 - 8276102
Alignment:
Q  464 aattcatcagatt-tctactcttaaatcaaccaattac 500  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  8276139 aattcatcagattatctactcttaaatcaaccaattac 8276102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 10813357 - 10813268
Alignment:
Q  7 atggacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaa 95  Q
    ||||||| |||||  | ||||| |||| ||||||| |||||| | || |||||||||||||| |||||| ||| ||||||||||| ||||    
T  10813357 atggacaacaacataagcaacttgcaacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcacacaa 10813268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 500
Target Start/End: Complemental strand, 38056822 - 38056785
Alignment:
Q  464 aattcatcagatt-tctactcttaaatcaaccaattac 500  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  38056822 aattcatcagattatctactcttaaatcaaccaattac 38056785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 38057464 - 38057399
Alignment:
Q  30 gcaatatagcaacattaatcacaataacttgaatgatatgaacaacaat-atttctatatcataca 94  Q
    |||| |||||||||| ||| | || |||||||||||||| ||||| ||| ||||||||||||||||    
T  38057464 gcaacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcataca 38057399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 51476836 - 51476901
Alignment:
Q  404 aaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattca 469  Q
    ||||||| ||||||||||||| ||||||| || |||||||||  ||||| ||||| ||| ||||||    
T  51476836 aaaactggttctaatcattgtactatgaacaatctaaggtcttaacactgtttcttcattaattca 51476901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 18823997 - 18824029
Alignment:
Q  179 aacaacttccattcctaccccaaggaccaactc 211  Q
    |||||||||||||||||||| ||||||||||||    
T  18823997 aacaacttccattcctaccctaaggaccaactc 18824029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 141
Target Start/End: Complemental strand, 21046850 - 21046743
Alignment:
Q  35 atagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacata-atatatgtatcttaaattatccaacat 132  Q
    |||||| ||||||| | || |||||||||||||| ||||||| || ||||||||||||||  | | |||||| ||||||||| || ||||||| |||||     
T  21046850 atagcatcattaataataacaacttgaatgatat-aacaacattattttctatatcataccttttccacatagatatatgtaactcaaattattcaacaa 21046752  T
Q  133 caatattca 141  Q
    ||| |||||    
T  21046751 caacattca 21046743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 51327010 - 51327105
Alignment:
Q  169 tataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcga-aaaagatcgtaagaaaactaaacaaggttgactgcca 264  Q
    |||||| || ||||||||| || ||||||||||||  | ||||  ||| |||||||||| ||||||| | |||||| ||||||||||||| ||||||    
T  51327010 tataatcattaacaacttc-atccctaccccaagggtcgactcataacatcacgtgcgacaaaagattgcaagaaacctaaacaaggttgtctgcca 51327105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 10 - 159
Target Start/End: Original strand, 788 - 937
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||  ||| |||||||||    || |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  788 gacagcaacaataacaacttgcatcataacaacattaacaggaacaacttgaatgatataaacaataatatttctatatcatacaatattcacataatat 887  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcact 159  Q
    |||||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  888 atgtatctcaaattattcaacaacaatattcatattaattcagactcact 937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 978 - 1099
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||| ||| |||||| ||  |||| ||||||||||||||||||||||||||||||| | |||| || |||||||||||||    
T  978 gacagcaacaataacaacttgcaacataacaacatcaacaacaacaacttgaatgatatgaacaacaatatttctacaacatataacattcacataatat 1077  T
Q  110 atgtatcttaaattatccaaca 131  Q
    |||||| | |||||||||||||    
T  1078 atgtatttcaaattatccaaca 1099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 10 - 159
Target Start/End: Original strand, 16825 - 16974
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||| | |||| ||| |||||||||| |||| ||||| |||||||||||||| ||||||||||||||| ||||| ||||||||||||    
T  16825 gacaacaacaataacaatttgcaacataacaacattaataacaacaacttaaatgatatgaacaagaatatttctatatcaaacaattttcacataatat 16924  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcact 159  Q
    |||||||| ||||||||||||| ||||| |||||||||||| ||||||||    
T  16925 atgtatctcaaattatccaacaacaataatcatattaattccgactcact 16974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 3243 - 3285
Alignment:
Q  169 tataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||||| || ||||||||||||||| |||||||||||||||||    
T  3243 tataatcattaacaacttccattccaaccccaaggaccaactc 3285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 10 - 159
Target Start/End: Complemental strand, 187480 - 187331
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||  ||| |||||||||    || |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  187480 gacagcaacaataacaacttgcatcataacaacattaacaggaacaacttgaatgatataaacaataatatttctatatcatacaatattcacataatat 187381  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcact 159  Q
    |||||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  187380 atgtatctcaaattattcaacaacaatattcatattaattcagactcact 187331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 187290 - 187169
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||| ||| |||||| ||  |||| ||||||||||||||||||||||||||||||| | |||| || |||||||||||||    
T  187290 gacagcaacaataacaacttgcaacataacaacatcaacaacaacaacttgaatgatatgaacaacaatatttctacaacatataacattcacataatat 187191  T
Q  110 atgtatcttaaattatccaaca 131  Q
    |||||| | |||||||||||||    
T  187190 atgtatttcaaattatccaaca 187169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 3e-43; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 10 - 159
Target Start/End: Original strand, 14629903 - 14630052
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||  ||| |||||||||    || |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  14629903 gacagcaacaataacaacttgcatcataacaacattaacaggaacaacttgaatgatataaacaataatatttctatatcatacaatattcacataatat 14630002  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcact 159  Q
    |||||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  14630003 atgtatctcaaattattcaacaacaatattcatattaattcagactcact 14630052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 16026874 - 16026770
Alignment:
Q  55 aacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaattcagac 154  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  16026874 aacttgaatgatatgaacaacaatatttctatatcacacaatattcacataatatatgtatctcaaattattcaacaacaatattcatattaattcagac 16026775  T
Q  155 tcact 159  Q
    |||||    
T  16026774 tcact 16026770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 9638046 - 9638185
Alignment:
Q  18 caataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatct 117  Q
    ||||||||| | |||  ||| |||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9638046 caataacaatttgcatcataacaacattaacagcaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatct 9638145  T
Q  118 taaattatccaacatcaatattcatattaattcagactca 157  Q
     ||||||| ||||| ||| |||||||||||||||||||||    
T  9638146 caaattattcaacaacaacattcatattaattcagactca 9638185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 282 - 487
Target Start/End: Complemental strand, 32466525 - 32466321
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaat-gcagttttcaacaagactc 379  Q
    |||||||||| | ||||| ||||||| |||| ||||||||||||||||||||||||||||||||| ||   ||||||||| || | |||   ||| ||||    
T  32466525 agcgatgaagttcatcactcgcgaggtgagatcagttactcgctatggcgagcgatgaatgtcagctc---gggcagaattgctgattttctcaaaactc 32466429  T
Q  380 acctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttct 479  Q
    | | ||||| ||   ||||||||||||||| ||||||||||||||||||||||||  ||||||||| ||||||| ||||||||||||| | ||| |||||    
T  32466428 atccaattcaatggttctaaccttaaaacttattctaatcattgttctatgaatagtctaaggtctggacactaattctacatcaatttaacaggtttct 32466329  T
Q  480 actcttaa 487  Q
    ||||||||    
T  32466328 actcttaa 32466321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 53631258 - 53631137
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||  ||| ||| |||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53631258 gacaacaacaataacaacttgcatcataacaatattaacagcaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 53631159  T
Q  110 atgtatcttaaattatccaaca 131  Q
    |||||||| |||||||||||||    
T  53631158 atgtatctcaaattatccaaca 53631137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 16026736 - 16026619
Alignment:
Q  15 caacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgta 114  Q
    |||||||||||||| |||  ||| |||||||||   ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16026736 caacaataacaacttgcatcataacaacattaacagcaacaatttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgta 16026637  T
Q  115 tcttaaattatccaacat 132  Q
    ||| ||||||| ||||||    
T  16026636 tctcaaattattcaacat 16026619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 282 - 482
Target Start/End: Original strand, 15612815 - 15613013
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactca 380  Q
    |||||||||| | ||||| ||||||| ||| |||| ||||||||||||||||||||||||||||| ||    |||||||||||| |||   ||| |||||    
T  15612815 agcgatgaagttcatcactcgcgaggggaggacagctactcgctatggcgagcgatgaatgtcagctca---ggcagaatgcagattttctcaaaactca 15612911  T
Q  381 cctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttcta 480  Q
     | ||||||||   ||||||||||||||||||  ||||||||||||||||||||  |||||||||  |||||| ||||||||||||| | ||| ||||||    
T  15612912 tccaattccatggttctaaccttaaaactgatcataatcattgttctatgaatagtctaaggtctgaacactaattctacatcaatttaacaggtttcta 15613011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 303 - 487
Target Start/End: Original strand, 21062385 - 21062567
Alignment:
Q  303 gaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaaga-ctcacctaattccataactctaacc 401  Q
    |||||||||| || ||||||||| |||||| ||||||||||||    ||||| |||||||||||||   ||| | |||||| || |||||   |||||||    
T  21062385 gaggcgagaatagctactcgctaaggcgagtgatgaatgtcagc---acgggaagaatgcagtttttctcaaaaactcacccaaatccatggttctaacc 21062481  T
Q  402 ttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    |||| ||| ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| ||| || |||| |||||    
T  21062482 ttaacactaattctaatcattgttctatgaatagtctaaggtctggacactatttctacatcaattcaacaggttcctacccttaa 21062567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 14630093 - 14630214
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||| ||| |||||| ||  |||| ||||||||||||||||||||||||||||||| | |||| || |||||||||||||    
T  14630093 gacagcaacaataacaacttgcaacataacaacatcaacaacaacaacttgaatgatatgaacaacaatatttctacaacatataacattcacataatat 14630192  T
Q  110 atgtatcttaaattatccaaca 131  Q
    |||||| | |||||||||||||    
T  14630193 atgtatttcaaattatccaaca 14630214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 22 - 271
Target Start/End: Original strand, 21061759 - 21062009
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||| |||||||||||||| |||| |||||||||||||| |||| |||||||| |||||||| ||| | | ||||||||| |||||  | ||    
T  21061759 aacaacttgcaacatagcaacattaataacaacaacttgaatgatataaacatcaatattttctatatcaaacattttccacataataaatgtaattgaa 21061858  T
Q  121 attatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtca 220  Q
    | || |||||| || |  |||| | ||||||||||| ||  |   |||||   || | ||||||||||| ||||||||||| |||||||||  ||| |||    
T  21061859 aataaccaacaacattgatcatttaaattcagactctctgaaaggcaatacctttgtaaacaacttccactcctaccccaaagaccaactcataacatca 21061958  T
Q  221 cgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagta 271  Q
     |||||| ||||||||||| ||  |||||||||| ||||||||| ||||||    
T  21061959 tgtgcgacaaagatcgtaataatcctaaacaaggctgactgccactgagta 21062009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 13036522 - 13036441
Alignment:
Q  50 acaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||| ||||||||||||||||||||||||||||||| | ||| ||| ||||||||||||||||||| |||||||||||||||    
T  13036522 acaacaacttgaatgatatgaacaacaatatttctacaacattcaacattcacataatatatgtattttaaattatccaaca 13036441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 282 - 465
Target Start/End: Original strand, 51993284 - 51993466
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaat-gcagttttcaacaagactc 379  Q
    |||||||||| | ||||| |||||||||||| |   | ||||||||||||||||||||||||||| ||   ||||||||| || | |||   ||| ||||    
T  51993284 agcgatgaagttcatcactcgcgaggcgagatcgtctgctcgctatggcgagcgatgaatgtcagctc---gggcagaattgccgattttctcaaaactc 51993380  T
Q  380 acctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaa 465  Q
    | | ||||| ||   | ||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||| |||||||||||    
T  51993381 atccaattcaatggttttaaccttaaaactgattctaatcattgttctatgaatagtctaaggtctggacactaattctacatcaa 51993466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 35 - 141
Target Start/End: Original strand, 3485164 - 3485269
Alignment:
Q  35 atagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatca 134  Q
    |||||||||||||| | ||  ||||| ||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  3485164 atagcaacattaataataaccacttggatggtat-aacaacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaaca 3485262  T
Q  135 atattca 141  Q
    | |||||    
T  3485263 acattca 3485269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 4615883 - 4615775
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| | || |||||||||||||| |||||| |||||| |||||||||||| | | ||||||||||||||| || ||||    
T  4615883 caacttgcaacatagcaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttccacataatatatgtaactcaaat 4615784  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  4615783 taaccaaca 4615775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 467
Target Start/End: Complemental strand, 35811592 - 35811520
Alignment:
Q  395 tctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaatt 467  Q
    |||||||| |||||||||||||| | ||||||||||||||  ||||||| | |||||||||||||||||||||    
T  35811592 tctaacctcaaaactgattctaaactttgttctatgaatattctaaggtatggacactatttctacatcaatt 35811520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 2585030 - 2584920
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||| ||| |||| ||||| | || |||| ||||||||| ||||||||||||| |||||||||||| | | ||||||||||||||| ||| |    
T  2585030 aacaacttgcaacataacaacgttaataataacaactcgaatgatataaacaacaatattttctatatcatacattttccacataatatatgtagcttga 2584931  T
Q  121 attatccaaca 131  Q
    |||| ||||||    
T  2584930 attaaccaaca 2584920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 6511807 - 6511917
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| | ||||||||||| ||||| | || |||| ||||||||| |||||||||| ||||||||||||||| | |  |||||||||||||| ||| |    
T  6511807 aacaacttgaaatatagcaacgttaataataacaactcgaatgatataaacaacaatattttctatatcatacattttctacataatatatgtagcttga 6511906  T
Q  121 attatccaaca 131  Q
    |||| ||||||    
T  6511907 attaaccaaca 6511917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 209
Target Start/End: Original strand, 27027970 - 27028156
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| | || |||||||||||||| |||||| ||| ||||||||||||||| | | |||||||||||| ||  ||||||    
T  27027970 caacttgcaacatagcaatattaataataacaacttgaatgatataaacaacgatactttctatatcatacattttccacataatatatatagtttaaat 27028069  T
Q  123 tatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaac 209  Q
    || |||||| ||  | | |||||| || ||| |||||  |   | |||   |||| | |||||||||||||||||||||||||||||    
T  27028070 taaccaacaacatcaattatattagtttagattcactgaaaggctatacctttataaccaacttccattcctaccccaaggaccaac 27028156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 141
Target Start/End: Original strand, 19734587 - 19734644
Alignment:
Q  84 tatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattca 141  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||    
T  19734587 tatatcatacaatattcacataatatatgtatctcaaattattcaacaacaacattca 19734644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 411 - 487
Target Start/End: Original strand, 21046 - 21122
Alignment:
Q  411 attctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    ||||||||||||||||||||||||  ||||||||| | ||||| ||||||||||||| | ||| || ||||||||||    
T  21046 attctaatcattgttctatgaatagtctaaggtctggtcactaattctacatcaatttaacaggttcctactcttaa 21122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 13446687 - 13446795
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| |||||||| ||||| | || |||| ||||||||| |||||| |||||| |||| ||||||| | ||||||||||||||||| ||| |||    
T  13446687 caacttgcaacatagcaacgttaataataacaactcgaatgatataaacaacgatattttctatctcatacatttttcacataatatatgtagcttgaat 13446786  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  13446787 taaccaaca 13446795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 211
Target Start/End: Complemental strand, 14933258 - 14933070
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| | || |||||||||||| | |||||| |||||| |||||||||||| | | ||||||| |||| || |||||||    
T  14933258 caacttgcaacatagcaatattaataataacaacttgaatgatgtaaacaacgatattttctatatcatacattttccacataacatatatagcttaaat 14933159  T
Q  123 tatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    || |||||| ||  | | ||||||  | ||| |||||  |   | |||   |||| |||||||||||||||||||||||||||||||||    
T  14933158 taaccaacaacatcaattatattagcttagattcactgaaaggctatacctttataaacaacttccattcctaccccaaggaccaactc 14933070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 20899577 - 20899469
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||| ||| |||||| |||| |||||||||||||| |||||| | |||| |||||||||||| | | |||||||||||| || |||||||    
T  20899577 caacttgcaacataacaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccacataatatatatagcttaaat 20899478  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  20899477 taaccaaca 20899469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 141
Target Start/End: Complemental strand, 33244056 - 33243950
Alignment:
Q  35 atagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaattatccaacatc 133  Q
    |||||| ||||||| | || |||||||||| ||| ||||||| ||||| |||||||||||  |||||||| ||||||||||||| ||||||| |||||      
T  33244056 atagcatcattaataataacaacttgaatggtat-aacaacattattttctatatcataccttattcacacaatatatgtatctcaaattattcaacaaa 33243958  T
Q  134 aatattca 141  Q
    ||||||||    
T  33243957 aatattca 33243950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 274
Target Start/End: Original strand, 50160346 - 50160480
Alignment:
Q  139 tcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgta 238  Q
    |||| ||||||||||||| ||  |||||| ||  || || |||||||  ||||||||||||||||||||||||  ||| || ||||||| ||||||||      
T  50160346 tcatcttaattcagactctctgaacaacattaatatcataaacaactatcattcctaccccaaggaccaactcataacatctcgtgcgacaaagatcgcc 50160445  T
Q  239 agaaaactaaacaaggttgactgccagtgagtaact 274  Q
    | ||  |||||||||||| ||||||| |||||||||    
T  50160446 aaaaccctaaacaaggtt-actgccaatgagtaact 50160480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 9638226 - 9638311
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaat-atttctatatcataca 94  Q
    |||| ||||||||||| || |||| |||||||||| ||| | || |||||||||||||| ||||| ||| ||||||||||||||||    
T  9638226 gacaacaacaataacatcttgcaacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcataca 9638311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 15448228 - 15448120
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| |||| || |||||| | || |||||||||||||| |||||| |||||| |||||||||||| | | |||||||||||  |||||||||     
T  15448228 caacttgcaacatagaaatattaataataaaaacttgaatgatataaacaacgatattttctatatcatacattttccacataatataaatatcttaaac 15448129  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  15448128 taaccaaca 15448120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 26050413 - 26050295
Alignment:
Q  139 tcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgta 238  Q
    ||||||||  ||||||||| |  ||| |||||  ||||| | |||| |||||||||| |||||||| ||||||  ||| ||| |||||| |||||||| |    
T  26050413 tcatattatatcagactcattgaacatcaataatattataatcaacctccattcctaacccaaggatcaactcaaaacctcatgtgcgacaaagatcgca 26050314  T
Q  239 agaaaactaaacaaggttg 257  Q
    ||||  |||||||||||||    
T  26050313 agaaccctaaacaaggttg 26050295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 14942312 - 14942275
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||| |||||||||||||||||||||||||||||||||    
T  14942312 ttataaacaacttccattcctaccccaaggaccaactc 14942275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 20936 - 21000
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcag 345  Q
    |||||||||| | ||||| ||||||||||| |||  ||||||||| |||||||||||||||||||    
T  20936 agcgatgaagttcatcactcgcgaggcgaggacaactactcgctaaggcgagcgatgaatgtcag 21000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 480
Target Start/End: Complemental strand, 9870654 - 9870578
Alignment:
Q  404 aaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttcta 480  Q
    ||||||| ||||||||||||| ||||||||||  ||||||||  ||||| ||||| ||| |||||| ||| ||||||    
T  9870654 aaaactggttctaatcattgtactatgaataatataaggtctgaacactgtttcttcattaattcaacaggtttcta 9870578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 51992914 - 51993004
Alignment:
Q  179 aacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagta 271  Q
    ||||||||||||||||| ||||| || ||||||  ||| |||||||||| |||||||  |||||  |||||||||| ||||||||| ||||||    
T  51992914 aacaacttccattcctaacccaa-gatcaactcacaacatcacgtgcgacaaagatcacaagaaccctaaacaagg-tgactgccactgagta 51993004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 4615732 - 4615695
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  4615732 ttataaacaacttccattcctaccccaaagaccaactc 4615695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 500
Target Start/End: Original strand, 9638912 - 9638949
Alignment:
Q  464 aattcatcagatt-tctactcttaaatcaaccaattac 500  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  9638912 aattcatcagattatctactcttaaatcaaccaattac 9638949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 20899426 - 20899389
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  20899426 ttataaacaactttcattcctaccccaaggaccaactc 20899389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 22354522 - 22354587
Alignment:
Q  404 aaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattca 469  Q
    ||||||| ||||||||||||| ||||||| || ||||||| |  ||||||||||| ||| ||||||    
T  22354522 aaaactggttctaatcattgtactatgaacaatctaaggtatgaacactatttcttcattaattca 22354587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 19609673 - 19609721
Alignment:
Q  92 acaatattcacataatatatgtatcttaaattatccaacatcaatattc 140  Q
    |||| ||||||||||||||||||| | |||||||||||||  |||||||    
T  19609673 acaacattcacataatatatgtatttcaaattatccaacaaaaatattc 19609721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 89; Significance: 1e-42; HSPs: 4)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 1620 - 1784
Alignment:
Q  18 caataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatct 117  Q
    ||||||||||| |||  ||| |||||||||   ||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1620 caataacaacttgcatcataacaacattaacagcaacaatttgaatgatatgaacaacaatatttctatatcatacaatattcacatagtatatgtatct 1719  T
Q  118 taaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaaca 182  Q
     ||||||| ||||| ||| |||||||||||||||||||||||| |  |||||| |||||| ||||    
T  1720 caaattattcaacaacaacattcatattaattcagactcactaaaagacaatacaattataaaca 1784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 4955 - 5077
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||  ||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4955 gacaacaacaataacaacttgcatcataacaacattaacaacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 5054  T
Q  110 atgtatcttaaattatccaacat 132  Q
    |||||||| ||||||| ||||||    
T  5055 atgtatctcaaattattcaacat 5077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 1807 - 1924
Alignment:
Q  15 caacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgta 114  Q
    |||||||||||||| |||  ||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1807 caacaataacaacttgcatcataacaacattaacaacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacacaatatatgta 1906  T
Q  115 tcttaaattatccaacat 132  Q
    ||| ||||||| ||||||    
T  1907 tctcaaattattcaacat 1924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 4773 - 4914
Alignment:
Q  18 caataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatct 117  Q
    |||||| |||| |||  ||| |||||||||  |||| || || |||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  4773 caataataacttgcatcataacaacattaacaacaacaatttaaatgatataaacaacaatatttatatattatacaatattcacataatatatgtatct 4872  T
Q  118 taaattatccaacatcaatattcatattaattcagactcact 159  Q
     ||||||  ||||| ||| |||||||||||||||||||||||    
T  4873 caaattaatcaacaacaacattcatattaattcagactcact 4914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 86; Significance: 7e-41; HSPs: 3)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 7572 - 7713
Alignment:
Q  18 caataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatct 117  Q
    |||||||||||  ||  ||| |||||||||  |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7572 caataacaacttccatcataacaacattaacaacaacaatttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatct 7671  T
Q  118 taaattatccaacatcaatattcatattaattcagactcact 159  Q
      |||||| ||||| ||| |||||||||||||||||||||||    
T  7672 cgaattattcaacaacaacattcatattaattcagactcact 7713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 7761 - 7870
Alignment:
Q  16 aacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtat 115  Q
    ||||||||||||| |||  ||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7761 aacaataacaacttgcatcataacaacattaacaacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcaaataatatatgtat 7860  T
Q  116 cttaaattat 125  Q
     | |||||||    
T  7861 atcaaattat 7870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 478
Target Start/End: Original strand, 4002 - 4085
Alignment:
Q  395 tctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttc 478  Q
    |||||||||| |||||||||||| |||  | |||||||| | ||||||| |  |||| ||||||||||||||||| ||| ||||    
T  4002 tctaaccttagaactgattctaaacatcatcctatgaattatctaaggtttgtacacaatttctacatcaattcaacagttttc 4085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 86; Significance: 7e-41; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 10 - 211
Target Start/End: Complemental strand, 290 - 89
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    ||||||||||||||||||| ||||  || |||||||||  |||| ||||||||| ||||||||||||||||||||| | |||||||| | |||||||||     
T  290 gacatcaacaataacaacttgcaacttaacaacattaacaacaacaacttgaataatatgaacaacaatatttctacaacatacaatttccacataatag 191  T
Q  110 atgtatcttaaattatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaac 209  Q
    |||||| | || |||||||||| |||||||||||||||||||||||||||  |  |||||| ||||||  |||| || |  ||||||||||| |||||||    
T  190 atgtatttaaatttatccaacaacaatattcatattaattcagactcactgtaagacaatacaattatatacaattttcgatcctaccccaaagaccaac 91  T
Q  210 tc 211  Q
    ||    
T  90 tc 89  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 55 - 270
Target Start/End: Complemental strand, 127581 - 127365
Alignment:
Q  55 aacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaattcaga 153  Q
    |||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||| || |||||| |||||| ||||| ||||||||||| |||    
T  127581 aacttgaatgatatgaacaacaatattttctatatcatacatttttcacataatatatgtagctcaaattaaccaacaacaataatcatattaatttaga 127482  T
Q  154 ctcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaag 253  Q
    ||||||  |   | |||   |||| |||||||| |||||||| |||||||||||||||  ||| | |||||||| |||||||| ||||| |||||  |||    
T  127481 ctcactgaaaggctatacctttataaacaactttcattcctatcccaaggaccaactcataacattacgtgcgacaaagatcgcaagaacactaagtaag 127382  T
Q  254 gttgactgccagtgagt 270  Q
    | ||||||||| |||||    
T  127381 gctgactgccactgagt 127365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 300 - 467
Target Start/End: Original strand, 398303 - 398468
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaat-gcagttttcaacaagactcacctaattccataactcta 398  Q
    ||||||||||||  || |||| |||||||||||||||||||||||| ||   ||||||||| |||| |||   ||| ||||| | ||||| || ||||||    
T  398303 cgcgaggcgagacaagctacttgctatggcgagcgatgaatgtcagctc---gggcagaattgcagattttctcaaaactcatccaattcaatgactcta 398399  T
Q  399 accttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaatt 467  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||| | ||||||| |||||||||||||    
T  398400 accttaaaactgattctaatcatcgttctatgaatagtctaaggtttggacactaattctacatcaatt 398468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 50 - 274
Target Start/End: Original strand, 3942 - 4166
Alignment:
Q  50 acaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatatta-at 148  Q
    |||| |||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||  |    
T  3942 acaacaacttgaatgatatgaacaacaatatctctacaacatacaatattcacataatatatgtatttcaaattatccaacaacaatattcatattactt 4041  T
Q  149 tcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaa 248  Q
    || |||||||| ||   ||| | |||||| | |||||| |||||||||||||| ||||||||| ||||  |||| |||| ||||  || ||||| || ||    
T  4042 tctgactcactgcaaggcaacacaattataagcaactttcattcctaccccaa-gaccaactcagaactacacgcgcgacaaaggacgcaagaacaccaa 4140  T
Q  249 acaaggttgactgccagtgagtaact 274  Q
    |||||| |||| || | |||||||||    
T  4141 acaaggctgacagcgattgagtaact 4166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 500
Target Start/End: Original strand, 4440 - 4622
Alignment:
Q  318 actcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactcacctaattccataactctaaccttaaaactgattctaa 417  Q
    |||||||||||||||||||||   |  | |||| ||||||||  ||| ||||| ||| |||| || ||||||||| ||| |||| ||||||||||| |||    
T  4440 actcgctatggcgagcgatgacgatttggtctatgggcagaacacagatttcagcaaaactctccaaattccatatctcaaaccctaaaactgattataa 4539  T
Q  418 tcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaaatcaaccaattac 500  Q
     ||||   |||||||||| |||||||||  |||||| ||||||||||||||| |||||||  ||| ||||| |||| ||||||    
T  4540 acattacactatgaataatctaaggtctgaacactaattctacatcaattcaacagattttcactattaaaccaactaattac 4622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 282 - 487
Target Start/End: Complemental strand, 126633 - 126429
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcag-ttttcaacaagactc 379  Q
    |||||||||| | ||||| |||||||||||| ||  ||||||||| ||||||||||||||||||| ||   |||||||||| || |||||   || ||||    
T  126633 agcgatgaagttcatcactcgcgaggcgagatcaactactcgctaaggcgagcgatgaatgtcagctc---gggcagaatgtagattttctcaaaaactc 126537  T
Q  380 acctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttct 479  Q
    ||| |||| ||||  ||||||||||||||||||| ||||||||||||||||||||  ||||||||| |||||||||||||||||||||||  || || ||    
T  126536 acccaattacatagttctaaccttaaaactgattataatcattgttctatgaatagtctaaggtctggacactatttctacatcaattcaataggttcct 126437  T
Q  480 actcttaa 487  Q
    ||||||||    
T  126436 actcttaa 126429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 127084 - 127022
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcg 236  Q
    |||| ||||||||||||||||||| |||||||||||||  ||| |||||||||| ||||||||    
T  127084 ttataaacaacttccattcctaccgcaaggaccaactcataacatcacgtgcgacaaagatcg 127022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 1252 - 1131
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||||||| |||||||||| |||  ||| ||| |||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1252 gacatcaataataacaacttgcatcataacaatattaacagcaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 1153  T
Q  110 atgtatcttaaattatccaaca 131  Q
    |||||||| |||||||||||||    
T  1152 atgtatctcaaattatccaaca 1131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 15371 - 15250
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||  ||| ||| |||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15371 gacagcaacaataacaacttgcatcataacaatattaacagcaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 15272  T
Q  110 atgtatcttaaattatccaaca 131  Q
    |||||||| |||||||||||||    
T  15271 atgtatctcaaattatccaaca 15250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 24429 - 24308
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||||| |||  ||| ||| |||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24429 gacagcaacaataacaacttgcatcataacaatattaacagcaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 24330  T
Q  110 atgtatcttaaattatccaaca 131  Q
    |||||||| |||||||||||||    
T  24329 atgtatctcaaattatccaaca 24308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 76; Significance: 6e-35; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 349 - 500
Target Start/End: Original strand, 8430 - 8581
Alignment:
Q  349 tacgggcagaatgcagttttcaacaagactcacctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctaga 448  Q
    |||||||||||  |||  |||| ||| |||| || ||||||||| |||||||| |||||||||||||| ||||||| |||||||||| |||||||||  |    
T  8430 tacgggcagaacacagaattcagcaaaactctcccaattccatatctctaaccctaaaactgattctagtcattgtactatgaataatctaaggtctgaa 8529  T
Q  449 cactatttctacatcaattcatcagatttctactcttaaatcaaccaattac 500  Q
    |||  |||||||||||||||| |||||||||||| |||||||||||||||||    
T  8530 caccgtttctacatcaattcaacagatttctactattaaatcaaccaattac 8581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 18142 - 18262
Alignment:
Q  97 attcacataatatatgtatcttaaattatccaacatcaatattcatattaattcagactcactac-acaacaatataattatgaacaacttccattccta 195  Q
    ||||| |||||||| |||| | || |||||||||  ||||||||||||||||||||  ||||||| | || |||||| ||||   |||||| |||  |||    
T  18142 attcatataatataagtatttcaagttatccaacgacaatattcatattaattcaggttcactacaaaaaaaatatagttatatgcaactttcatctcta 18241  T
Q  196 ccccaaggaccaactcggaac 216  Q
    |||||| ||||||||| ||||    
T  18242 ccccaaagaccaactcagaac 18262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 300 - 487
Target Start/End: Original strand, 4682 - 4867
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaat-gcagttttcaacaagactcacctaattccataactcta 398  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||   ||||| ||| |||  |||   ||| ||||| | ||||| ||   ||||    
T  4682 cgcgaggcgagatcagttactcgctatggcgagcgatgaatgtcagctc---gggcataattgcatattttctcaaaactcatccaattcaatggttcta 4778  T
Q  399 accttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| ||||||| ||||||||||||| | ||| ||||| |||||||    
T  4779 accttaaaactgattctaatcattgttctatgaatagtctaaggtctggacactaattctacatcaatttaacaggtttctcctcttaa 4867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 3686 - 3807
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    ||||| ||||||||||| | ||   ||| |||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3686 gacataaacaataacaagttgcttcataacaacattaacaacaacaacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 3785  T
Q  110 atgtatcttaaattatccaaca 131  Q
    |||||| | |||||||||||||    
T  3786 atgtatttcaaattatccaaca 3807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 70 - 144
Target Start/End: Original strand, 11447 - 11521
Alignment:
Q  70 aacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatat 144  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || ||||||| ||||| ||| ||||||||    
T  11447 aacaacattatttctatatcatacaatattcacataatatatgtacctcaaattattcaacaacaacattcatat 11521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 71; Significance: 6e-32; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 282 - 487
Target Start/End: Original strand, 29112 - 29314
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcag-ttttcaacaagactc 379  Q
    |||||||||| | ||||| || ||| ||||| ||| || |||||| ||||||||||||||||||| ||   ||||||||||||| |||||   || ||||    
T  29112 agcgatgaagttcatcactcgtgagacgagatcagctattcgctaaggcgagcgatgaatgtcagctc---gggcagaatgcagattttctcaaaaactc 29208  T
Q  380 acctaattccataactctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttct 479  Q
    ||| ||||||||   |||||||||||||||||||||||||||||||||||||  |  |||||||||||||| |||||||||||||||||| ||  || ||    
T  29209 acccaattccatggttctaaccttaaaactgattctaatcattgttctatga--agtctaaggtctagacattatttctacatcaattcaacatgttcct 29306  T
Q  480 actcttaa 487  Q
    ||||||||    
T  29307 actcttaa 29314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 264
Target Start/End: Original strand, 28531 - 28751
Alignment:
Q  41 acattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatatt 139  Q
    |||||||| | || |||||||||||||| ||||||| || ||||| ||||||||| | |||||||||||||||||| | | |||| |||||| || || |    
T  28531 acattaataataacaacttgaatgatat-aacaacattagtttctgtatcatacatt-ttcacataatatatgtatttcacattaaccaacaacattaat 28628  T
Q  140 catattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtca-cgtgcgaaaaagatcgta 238  Q
    ||| |||||| ||| || ||  |   | | |   |||| ||||||||||||||||||||||| |||||||||  |  |||| | ||||| |||||||| |    
T  28629 cattttaatttaga-tctctgaaaggctaaacctttataaacaacttccattcctaccccaaagaccaactc--attgtcatcatgcgataaagatcgca 28725  T
Q  239 agaaaactaaacaaggttgactgcca 264  Q
    ||||  ||||||||||||||||||||    
T  28726 agaaccctaaacaaggttgactgcca 28751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 47241 - 47195
Alignment:
Q  165 acaatataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||||||||| || |||||||| | ||||||||||||||||||||||    
T  47241 acaatataatcatcaacaactttctttcctaccccaaggaccaactc 47195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 36 - 264
Target Start/End: Original strand, 474 - 702
Alignment:
Q  36 tagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaattatccaacatca 134  Q
    ||||||||| ||| | || |||||  |||||||  |||| ||||||| |||||||||||| | | ||||||||||||||| || |||||  |||||| ||    
T  474 tagcaacatgaataataacaacttagatgatatacacaataatattttctatatcatacattttccacataatatatgtagctcaaatttaccaacaaca 573  T
Q  135 atattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagat 234  Q
     || |||| |||||||| |||||||  || ||| ||||||||| |||||||| ||||| || ||||| ||||||||| |||| |||||||||| ||||||    
T  574 ttaatcat-ttaattcaaactcactgaaccacagtataattataaacaactttcattcttatcccaaagaccaactcagaacatcacgtgcgacaaagat 672  T
Q  235 cgtaagaaaactaaacaaggttgactgcca 264  Q
    || |||||  |||||||||||| |||||||    
T  673 cgcaagaaccctaaacaaggttaactgcca 702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 36 - 264
Target Start/End: Original strand, 8729 - 8957
Alignment:
Q  36 tagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaattatccaacatca 134  Q
    ||||||||| ||| | || |||||  |||||||  |||| ||||||| |||||||||||| | | ||||||||||||||| || |||||  |||||| ||    
T  8729 tagcaacatgaataataacaacttagatgatatacacaataatattttctatatcatacattttccacataatatatgtagctcaaatttaccaacaaca 8828  T
Q  135 atattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagat 234  Q
     || |||| |||||||| |||||||  || ||| ||||||||| |||||||| ||||| || ||||| ||||||||| |||| |||||||||| ||||||    
T  8829 ttaatcat-ttaattcaaactcactgaaccacagtataattataaacaactttcattcttatcccaaagaccaactcagaacatcacgtgcgacaaagat 8927  T
Q  235 cgtaagaaaactaaacaaggttgactgcca 264  Q
    || |||||  |||||||||||| |||||||    
T  8928 cgcaagaaccctaaacaaggttaactgcca 8957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 34496 - 34617
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| ||||||||| || |  ||| |||||||||||||  |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||     
T  34496 gacagcaacaataaaaaatttcaacatagcaacattaacaacaacaacttgaatgatatgaataacaatatttctatatcataaaatattcacataatac 34595  T
Q  110 atgtatcttaaattatccaaca 131  Q
    |||||||| |||||||||||||    
T  34596 atgtatctcaaattatccaaca 34617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 32690 - 32730
Alignment:
Q  327 ggcgagcgatgaatgtcagttctacgggcagaatgcagttttca 370  Q
    ||||||||||||||||||   |||||||||||||||||||||||    
T  32690 ggcgagcgatgaatgtca---ctacgggcagaatgcagttttca 32730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 168704 - 168825
Alignment:
Q  10 gacatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatat 109  Q
    |||| |||||||||||| | |||| ||| |||||||||  |||| ||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||    
T  168704 gacaacaacaataacaaattgcaacataacaacattaacaacaacaacttgaataatatgaacaacaatatttcaatatcatacaatattaacataatat 168803  T
Q  110 atgtatcttaaattatccaaca 131  Q
    |||||| | |||||||||||||    
T  168804 atgtatttcaaattatccaaca 168825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 68; Significance: 4e-30; HSPs: 4)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 300 - 487
Target Start/End: Original strand, 5690 - 5876
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaat-gcag-ttttcaacaagactcacctaattccataactct 397  Q
    |||||||||||| |||||||||||||||||||||||| |||||||  ||   ||||||||| |||| ||||   ||| ||||| | ||||| ||   |||    
T  5690 cgcgaggcgagatcagttactcgctatggcgagcgattaatgtcaactc---gggcagaattgcagatttttctcaaaactcatccaattcaatggttct 5786  T
Q  398 aaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    |||||||||||||||||||||||||| | ||||||||  ||||||||| ||||||| ||||||||||||| | ||| |||||||||||||    
T  5787 aaccttaaaactgattctaatcattgctatatgaatagtctaaggtctggacactaattctacatcaatttaacaggtttctactcttaa 5876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 35 - 141
Target Start/End: Original strand, 33603 - 33708
Alignment:
Q  35 atagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatca 134  Q
    |||||||||||||| | ||  ||||| ||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  33603 atagcaacattaataataaccacttggatggtat-aacaacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaaca 33701  T
Q  135 atattca 141  Q
    | |||||    
T  33702 acattca 33708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 14334 - 14437
Alignment:
Q  50 acaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaatt 149  Q
    |||| ||||||| |||| ||||| |||||||||| || ||| | ||||||||||||||| ||  |||| |||||| |||||| ||   ||||||||||||    
T  14334 acaacaacttgagtgatgtgaaccacaatatttcaatgtcacataatattcacataatacatacatctcaaattacccaacaacatacttcatattaatt 14433  T
Q  150 caga 153  Q
    ||||    
T  14434 caga 14437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 179 - 264
Target Start/End: Original strand, 3105 - 3189
Alignment:
Q  179 aacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgcca 264  Q
    ||||||||||||| ||| ||||||| | |||||  ||| ||| |||||| |||||||| |||||  ||||||||||||||||||||    
T  3105 aacaacttccatttctatcccaaggtc-aactcacaacatcatgtgcgacaaagatcgcaagaaccctaaacaaggttgactgcca 3189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 300 - 467
Target Start/End: Original strand, 4126 - 4291
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcag-ttttcaacaagactcacctaattccataactcta 398  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||| ||   ||||||||||||| |||||   || ||||| | ||||||||   ||||    
T  4126 cgcgaggcgagatcagctactcgctatggcgagtgatgaatgtcagctc---gggcagaatgcagattttctcaaaaactcatccaattccatggttcta 4222  T
Q  399 accttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaatt 467  Q
    || |||||||||||||||||||||||| ||||||||  ||||||||| |||| || |||||||||||||    
T  4223 acattaaaactgattctaatcattgttttatgaatagtctaaggtctggacattaattctacatcaatt 4291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 3701 - 3754
Alignment:
Q  218 tcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagta 271  Q
    |||||||||| |||||| | |||||  |||||||||||||||||||| ||||||    
T  3701 tcacgtgcgacaaagattgcaagaatcctaaacaaggttgactgccactgagta 3754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 58 - 274
Target Start/End: Complemental strand, 2716 - 2498
Alignment:
Q  58 ttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatct-taaattatccaacatcaatattcatattaattcagact 155  Q
    ||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||  |||||| ||||||||| || | || ||||||||||||    
T  2716 ttgaatgatatgaacaacaatattttctatatcatacaatttccacataatatatgtatctcaaaattaaccaacatcattaatgattttaattcagact 2617  T
Q  156 cactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggt 255  Q
    | ||  |   | |||   |||| |||||||||||||| ||||| |  |||||||||| ||| |||| ||||| |||||||| |||||  ||||  ||||     
T  2616 ctctgaaaggctatacctttataaacaacttccattcataccctacagaccaactcgtaacatcacatgcgacaaagatcgcaagaactctaagtaaggc 2517  T
Q  256 tgactgccagtgagtaact 274  Q
    ||||||||| |||||||||    
T  2516 tgactgccactgagtaact 2498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 60; Significance: 2e-25; HSPs: 3)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 304 - 487
Target Start/End: Original strand, 19695 - 19881
Alignment:
Q  304 aggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaaga-ctcacctaattccataactctaacct 402  Q
    ||||| || ||| ||||||||| ||||||||||||||||||| ||   |||||||||||| |||| | ||| | |||||| ||| ||||   ||||||||    
T  19695 aggcgggatcagctactcgctacggcgagcgatgaatgtcagctc---gggcagaatgcaatttttatcaaaaactcacccaatcccatggttctaacct 19791  T
Q  403 taaaactgattctaatcattgttctatgaa-----taacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    |||||||||||||||||||||||||| |||     |||  |||||||| ||||||||||||||||||||||| ||  || ||||||||||    
T  19792 taaaactgattctaatcattgttctacgaatagtctaaggtaaggtctggacactatttctacatcaattcaacaagttcctactcttaa 19881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 15984 - 16068
Alignment:
Q  11 acatcaacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaat-atttctatatcataca 94  Q
    |||||||||  |||| || |||| |||||||||| ||| | || |||||||||||||| ||||| ||| ||||||||||||||||    
T  15984 acatcaacataaacatcttgcaacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcataca 16068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 463 - 500
Target Start/End: Original strand, 13850 - 13888
Alignment:
Q  463 caattcatcagatt-tctactcttaaatcaaccaattac 500  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  13850 caattcatcagattatctactcttaaatcaaccaattac 13888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 50 - 242
Target Start/End: Original strand, 18973 - 19166
Alignment:
Q  50 acaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaat 148  Q
    |||| |||||||||| |||||| ||||  |||| ||| | |||||||||| ||||||||||| | || | || |||||||||  ||||||||||||||||    
T  18973 acaacaacttgaatggtatgaataacatcattttctacaacatacaatatccacataatatacgcatttcaatttatccaaccacaatattcatattaat 19072  T
Q  149 tcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaa 242  Q
    ||||  |||||| | |||| || | ||||   ||||||  ||||||||||||| ||||||||| ||||| ||||||||||||||| || |||||    
T  19073 tcaggttcactataaaacagtacatttatatgcaactttgattcctaccccaaagaccaactcagaacgacacgtgcgaaaaagaacgcaagaa 19166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 395 - 476
Target Start/End: Original strand, 96233 - 96314
Alignment:
Q  395 tctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatt 476  Q
    ||||||||||||||||||||||||||| ||||||||||||  ||||||||| |||| |||||||||||||||||| ||||||    
T  96233 tctaaccttaaaactgattctaatcatggttctatgaatagtctaaggtctggacattatttctacatcaattcaacagatt 96314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 274
Target Start/End: Original strand, 95676 - 95771
Alignment:
Q  179 aacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    ||||||||  ||||||| ||||| |||||||||  ||  |||||||||| || ||||| |||||  |||||||||||||||||||| |||||||||    
T  95676 aacaactttgattcctatcccaaagaccaactcataagctcacgtgcgacaatgatcgcaagaaccctaaacaaggttgactgccactgagtaact 95771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 34210 - 34100
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatat-ttctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||| |||||||||||||| | || |||||||||||||| ||||||||||| |||||||||||||| | | ||||||||||||||| || ||    
T  34210 aacaactagcaacatagcaacattaataataacaacttgaatgatataaacaacaatatcttctatatcatacattttccacataatatatgtaactcaa 34111  T
Q  121 attatccaaca 131  Q
    |||| ||||||    
T  34110 attaaccaaca 34100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 57 - 131
Target Start/End: Original strand, 25830 - 25904
Alignment:
Q  57 cttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    ||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||| | |||||||||||||    
T  25830 cttgaatgatatgaacaacaatatttctacaacatacaacattcacataatatatgtatttcaaattatccaaca 25904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 395 - 484
Target Start/End: Complemental strand, 52762 - 52673
Alignment:
Q  395 tctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactct 484  Q
    |||||| |||||||||||||||||||||||||||||||||  ||||||||| ||||||| || |||||||||| | ||| ||||||||||    
T  52762 tctaactttaaaactgattctaatcattgttctatgaatagtctaaggtctggacactaattttacatcaatttaacaggtttctactct 52673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 55710 - 55850
Alignment:
Q  327 ggcgagcgatgaatgtcagttctacgggcagaat-gcagttttcaacaagactcacctaattccataactctaaccttaaaactgattctaatcattgtt 425  Q
    ||||||||||||||||||| ||   ||||||||| |||| |||  |||| ||||| |||||  ||||  |||||||||||||  ||||||||| ||  |     
T  55710 ggcgagcgatgaatgtcagctc---gggcagaattgcagattttcacaaaactcatctaatctcatagttctaaccttaaaatcgattctaattatcatc 55806  T
Q  426 ctatgaataacctaaggtctagacactatttctacatcaattca 469  Q
    ||||| || | ||||||| |  |||| |||||||||||||||||    
T  55807 ctatggattatctaaggtttgtacacaatttctacatcaattca 55850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 141
Target Start/End: Original strand, 145987 - 146091
Alignment:
Q  36 tagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaa 135  Q
    ||||||||||||| | ||  ||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||  ||||| |||    
T  145987 tagcaacattaataataaccacttggatgatat-aacaacattatttctatatcatacaatattcacataatatatgtatctcaaattaatcaacaacaa 146085  T
Q  136 tattca 141  Q
     |||||    
T  146086 cattca 146091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 6837 - 6901
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  6837 atgaacaacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaaca 6901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 20976 - 21040
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  20976 atgaacaacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaaca 21040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 22345 - 22416
Alignment:
Q  70 aacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattca 141  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||    
T  22345 aacaacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaacattca 22416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 29445 - 29516
Alignment:
Q  70 aacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattca 141  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||    
T  29445 aacaacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaacattca 29516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 51; Significance: 5e-20; HSPs: 4)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 6139 - 6249
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||| ||||||| |||||| | ||||||||||||||||| |||||||||| ||||||||||||||| | | ||||||| |||| || |||||    
T  6139 aacaacttgcaacatagcaatattaataataataacttgaatgatataaacaacaatactttctatatcatacattttccacataaaatatatagcttaa 6238  T
Q  121 attatccaaca 131  Q
    |||| ||||||    
T  6239 attaaccaaca 6249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 8291 - 8401
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||| ||||||| |||||| | ||||||||||||||||| |||||||||| ||||||||||||||| | | ||||||| |||| || |||||    
T  8291 aacaacttgcaacatagcaatattaataataataacttgaatgatataaacaacaatactttctatatcatacattttccacataaaatatatagcttaa 8390  T
Q  121 attatccaaca 131  Q
    |||| ||||||    
T  8391 attaaccaaca 8401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 6292 - 6329
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  6292 ttataaacaacttccattccaaccccaaggaccaactc 6329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 8444 - 8481
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  8444 ttataaacaacttccattccaaccccaaggaccaactc 8481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 35 - 141
Target Start/End: Complemental strand, 15308 - 15203
Alignment:
Q  35 atagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatca 134  Q
    |||||||||||||| | ||  ||||| ||| ||| || |||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  15308 atagcaacattaataataaccacttggatggtataaa-aacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaaca 15210  T
Q  135 atattca 141  Q
    | |||||    
T  15209 acattca 15203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 30409 - 30503
Alignment:
Q  180 acaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagtaact 274  Q
    |||||||||||||||||||||| |||||||||  ||| |||||||||| |||||||| |||||  ||||||||||||| |||||| |||| ||||    
T  30409 acaacttccattcctaccccaaagaccaactcacaacatcacgtgcgacaaagatcgcaagaaccctaaacaaggttgtctgccaatgagcaact 30503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 282 - 421
Target Start/End: Original strand, 30832 - 30970
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcag-ttttcaacaagactc 379  Q
    |||||||||||| ||||| ||||| |||||||||| |||||||  |||||||| ||||||||||| |   | |||||||||||| |||||   || | ||    
T  30832 agcgatgaagatcatcactcgcgaagcgagaacagctactcgccgtggcgagcaatgaatgtcagct---caggcagaatgcagtttttctcaaaaattc 30928  T
Q  380 acctaattccataactctaaccttaaaactgattctaatcat 421  Q
    ||| ||||||||   |||||||||||||||||||||||||||    
T  30929 acccaattccatggttctaaccttaaaactgattctaatcat 30970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 271
Target Start/End: Complemental strand, 11540 - 11395
Alignment:
Q  126 ccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgc 225  Q
    |||||| || || |||| ||||||||||||| ||  |||||||||  ||||| |||||||| |||| ||||||||| |||||||||  ||| || |||||    
T  11540 ccaacaacattaatcatcttaattcagactctctgaacaacaataatattataaacaactttcatttctaccccaaagaccaactcataacatctcgtgc 11441  T
Q  226 gaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagta 271  Q
    || ||| |||| |||||  ||||||||||||| |||||| ||||||    
T  11440 gacaaatatcgcaagaatcctaaacaaggttgtctgccactgagta 11395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 478
Target Start/End: Complemental strand, 10978 - 10895
Alignment:
Q  395 tctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttc 478  Q
    ||||||||||||||||||||||||||   | ||| |||| | |||||||||  |||| ||||||||||||||||| ||| ||||    
T  10978 tctaaccttaaaactgattctaatcaccatcctaggaattatctaaggtctgtacacaatttctacatcaattcaacaggtttc 10895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 29897 - 29958
Alignment:
Q  70 aacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  29897 aacaacattatttctatatcatacaatattcacataatatatgtatctcaaattattcaaca 29958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 6054 - 5990
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  6054 atgaacaacattatgtctatatcatacaatattcacataatatatgtatctcaaattattcaaca 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 5059 - 5167
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| | ||||||||||||||||| |||||||||| ||||||||||||||| | | ||||||| |||| || |||||||    
T  5059 caacttgcaacatagcaatattaataataataacttgaatgatataaacaacaatactttctatatcatacattttccacataaaatatatagcttaaat 5158  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  5159 taaccaaca 5167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 5210 - 5246
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaact 210  Q
    |||| ||||||||||||||||||||||||||||||||    
T  5210 ttataaacaacttccattcctaccccaaggaccaact 5246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 211
Target Start/End: Original strand, 6855 - 7043
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| |||||||||||||| | || ||||  |||||||| ||||||||||||| |||||||||||| | | ||||||||||||||| |||||||    
T  6855 caacttgcaacatagcaacattaataataacaactcaaatgatataaacaacaatattttctatatcatacattttccacataatatatgtagcttaaat 6954  T
Q  123 tatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    || |||||| ||  | | ||||||  | | | |||||  |   | |||   |||| |||||||||||||||||||||||||||||||||    
T  6955 taaccaacaacatcaattatattagcttaaattcactgaaaggctatacctttataaacaacttccattcctaccccaaggaccaactc 7043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 211
Target Start/End: Original strand, 3113 - 3301
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| |||| |||||||||||||| |||||| | | ||||||||||||||| | | | |||||||||| || |||||||    
T  3113 caacttgcaacatagcaatattaataacaacaacttgaatgatataaacaacgacattttctatatcatacattttccccataatatatatagcttaaat 3212  T
Q  123 tatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    || |||||||||  | | ||||||  | ||| |||||  | | | |||   |||| | |||||||||||||||||||||||||||||||    
T  3213 taaccaacatcatcaattatattagcttagattcactgaaaagctatacctttataatcaacttccattcctaccccaaggaccaactc 3301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 21392 - 21456
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| |||||    
T  21392 atgaacaacattatttctatatcataaaatattcacataatatatgtatctcaaattattcaaca 21456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 11082 - 11153
Alignment:
Q  70 aacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattca 141  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||    
T  11082 aacaacattatttctatgtcatacaatattcacataatatatgtatctcaaattattcaacaacaacattca 11153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 141
Target Start/End: Original strand, 7228 - 7333
Alignment:
Q  35 atagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatca 134  Q
    |||||||||||||| | ||  ||||| ||| ||| ||||||| |||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||| ||    
T  7228 atagcaacattaataataaccacttggatggtat-aacaacattatttccatatcatacaatattcacataatttatgtatctcaaattattcaacaaca 7326  T
Q  135 atattca 141  Q
    | |||||    
T  7327 acattca 7333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 742 - 671
Alignment:
Q  70 aacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatcaatattca 141  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||    
T  742 aacaacattatttctatgtcatacaatattcacataatatatgtatctcaaattattcaacaacaacattca 671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 141
Target Start/End: Complemental strand, 6079 - 5974
Alignment:
Q  35 atagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaacatca 134  Q
    |||||||||||||| | ||  ||||| ||| ||| ||||||| |||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||| ||    
T  6079 atagcaacattaataataaccacttggatggtat-aacaacattatttccatatcatacaatattcacataatttatgtatctcaaattattcaacaaca 5981  T
Q  135 atattca 141  Q
    | |||||    
T  5980 acattca 5974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 78296 - 78410
Alignment:
Q  16 aacaataacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtat 115  Q
    ||||||||||||| | |  ||| |||||||||| | ||  ||||| ||| ||| ||||||| |||||||||| |||||||||||||||||||||||||||    
T  78296 aacaataacaacttgaatcataacaacattaataataaccacttggatggtat-aacaacattatttctataccatacaatattcacataatatatgtat 78394  T
Q  116 cttaaattatccaaca 131  Q
    || ||||||| |||||    
T  78395 ctcaaattattcaaca 78410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 211
Target Start/End: Original strand, 3268 - 3458
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||| ||||||| |||||  | || |||||||||| ||| |||||| |||||| |||||||||||| | | ||||||||||||||| |||||    
T  3268 aacaacttgcaacatagcaatattaacaataacaacttgaatgttataaacaacgatattttctatatcatacattttccacataatatatgtagcttaa 3367  T
Q  121 attatccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||| |||||| |   | | ||||||||| ||| |||||| |   | |||   |||| |||||||| |||||||||||||| |||||||||    
T  3368 attaaccaacaacgtcaattatattaatttagattcactaaaaggctatacctttataaacaactttcattcctaccccaacgaccaactc 3458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 503 - 556
Alignment:
Q  78 tatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  503 tatttctatatcatacaatattcacataatatatgtatctcaaattattcaaca 556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 39406 - 39487
Alignment:
Q  50 acaataacttgaatgatatgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||| ||||||||||||||||||| ||||||||||| | ||| ||| ||||| ||||||||||||| | |||||||||||||    
T  39406 acaacaacttgaatgatatgaacatcaatatttctacaacattcaacattcatataatatatgtatttcaaattatccaaca 39487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 454 - 346
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| | || |||||||||||||| |||||| ||| ||||||||||||||| | ||||||||| |||| || |||||||    
T  454 caacttgcaacatagcaatattaataataacaacttgaatgatataaacaacgatactttctatatcatacatttttcacataaaatatatagcttaaat 355  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  354 taaccaaca 346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 10686 - 10639
Alignment:
Q  78 tatttctatatcatacaatattcacataatatatgtatcttaaattat 125  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  10686 tatttctatatcatacaatattcacataatatatgtatctcaaattat 10639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 1217 - 1302
Alignment:
Q  126 ccaacatcaatattcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||||| || || |||| ||||||||||||| ||  |||||||||  ||| |||||||||| ||||||||||||||||||||||||    
T  1217 ccaacaacattaatcatcttaattcagactctctgaacaacaataatattttgaacaactttcattcctaccccaaggaccaactc 1302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 468
Target Start/End: Original strand, 1805 - 1971
Alignment:
Q  300 cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaatgcag-ttttcaacaagactcacctaattccataactcta 398  Q
    |||||| ||||| ||| | ||||||  |||||||||||| |||||| ||   ||||||||||||| |||||   || | ||||| ||| ||||   ||||    
T  1805 cgcgagccgagaccagctgctcgctgaggcgagcgatgactgtcagctc---gggcagaatgcagattttctcaaaaattcacccaatcccatggttcta 1901  T
Q  399 accttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattc 468  Q
    ||||||||||| |||||||||||    |||||||| | |||||||||  ||||  |||||||||||||||    
T  1902 accttaaaactaattctaatcatcaacctatgaatcatctaaggtctgtacacagtttctacatcaattc 1971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 3609 - 3658
Alignment:
Q  82 tctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  3609 tctatatcatacaatattcacataatatatgtatctcaaattattcaaca 3658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 345 - 453
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||| | || ||||||||||| || |||||| |||||| |||||||||||| | | |||||||||||| || |||||||    
T  345 caacttgcaacatagcaatattaataataacaacttgaatgaaataaacaacgatattttctatatcatacattttccacataatatatatagcttaaat 444  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  445 taaccaaca 453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 13393 - 13329
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||| |||||||||||||||||||  ||| ||||||||||||||| ||||||| |||||    
T  13393 atgaacaacattatttctatatcatacaatcatcaaataatatatgtatctcaaattattcaaca 13329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 411 - 487
Target Start/End: Original strand, 60745 - 60821
Alignment:
Q  411 attctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttctactcttaa 487  Q
    ||||||||||||||||||||||||  ||||||||| | ||||| ||||||||||||| | ||| || ||||||||||    
T  60745 attctaatcattgttctatgaatagtctaaggtctggtcactaattctacatcaatttaacaggttcctactcttaa 60821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 60635 - 60699
Alignment:
Q  282 agcgatgaagatgatcac-cgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcag 345  Q
    |||||||||| | ||||| ||||||||||| |||  ||||||||| |||||||||||||||||||    
T  60635 agcgatgaagttcatcactcgcgaggcgaggacaactactcgctaaggcgagcgatgaatgtcag 60699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 120234 - 120298
Alignment:
Q  67 atgaacaacaatatttctatatcatacaatattcacataatatatgtatcttaaattatccaaca 131  Q
    |||||||||| ||||||||||||||| |||| ||| ||||||||||||||| ||||||| |||||    
T  120234 atgaacaacattatttctatatcataaaataatcaaataatatatgtatctcaaattattcaaca 120298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 417
Target Start/End: Complemental strand, 34209 - 34122
Alignment:
Q  327 ggcgagcgatgaatgtcagttctacgggcagaatgcagttttcaacaagactcacctaattccataactctaaccttaaaactgattctaa 417  Q
    ||||||||||||||||| ||   ||||||||| ||||||||||   || | ||||| ||| ||||   |||||||||||||||||||||||    
T  34209 ggcgagcgatgaatgtctgt---acgggcagattgcagttttcttaaaaattcacccaatcccattgttctaaccttaaaactgattctaa 34122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 137 - 255
Target Start/End: Complemental strand, 12838 - 12721
Alignment:
Q  137 attcatattaattcagactcactacacaacaatataattatgaacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcg 236  Q
    |||||| |||| |||| ||| ||| |||| |||||| |||| |||||||  ||||||||||||||||||||||||  ||| || ||||||| |||||| |    
T  12838 attcatcttaaatcaggctctctaaacaataatata-ttataaacaactctcattcctaccccaaggaccaactcataacctctcgtgcgacaaagatag 12740  T
Q  237 taagaaaactaaacaaggt 255  Q
     |||||  |||||||||||    
T  12739 caagaaccctaaacaaggt 12721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 4086 - 4123
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||| |||||||||||||||||||||||||||||||||    
T  4086 ttataaacaacttccattcctaccccaaggaccaactc 4123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 754 - 646
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaa 120  Q
    |||||||  ||| |||||||| ||||| || | |||||| ||||||| ||||||| ||||| |||||||||||  | |||||||||||||||||||| ||    
T  754 aacaacttccaacatagcaacgttaataactacaacttggatgatat-aacaacattattttctatatcatacctt-ttcacataatatatgtatctcaa 657  T
Q  121 attatccaaca 131  Q
    |||||||||||    
T  656 attatccaaca 646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 6058 - 5950
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaa 120  Q
    |||||||  ||| |||||||| ||||| || | |||||| ||||||| ||||||| ||||| |||||||||||  | |||||||||||||||||||| ||    
T  6058 aacaacttccaacatagcaacgttaataactacaacttggatgatat-aacaacattattttctatatcatacctt-ttcacataatatatgtatctcaa 5961  T
Q  121 attatccaaca 131  Q
    |||||||||||    
T  5960 attatccaaca 5950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 466
Target Start/End: Original strand, 15117 - 15179
Alignment:
Q  404 aaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaat 466  Q
    ||||||||||||||  |||||||||||||||  |||||| || ||||||||||||||||||||    
T  15117 aaaactgattctaagaattgttctatgaatagtctaaggactggacactatttctacatcaat 15179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 14538 - 14608
Alignment:
Q  188 cattcctaccccaaggaccaactcggaacgtcacgtgcga-aaaagatcgtaagaaaactaaacaaggttg 257  Q
    ||||||||||| ||||| ||||||  ||| ||| |||||| ||||||||| |||||| |||||||||||||    
T  14538 cattcctaccctaaggatcaactcataacatcatgtgcgacaaaagatcgcaagaaacctaaacaaggttg 14608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 10910 - 11019
Alignment:
Q  23 acaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatat-ttctatatcatacaatattcacataatatatgtatcttaaa 121  Q
    |||||| |||| |||| ||||||||| | || |||||||||||||| || ||||||||  | ||||||||||| | | ||||||||||||||| || |||    
T  10910 acaacttgcaacatagaaacattaataataacaacttgaatgatataaagaacaatatcatatatatcatacattttccacataatatatgtaactcaaa 11009  T
Q  122 ttatccaaca 131  Q
    ||| ||||||    
T  11010 ttaaccaaca 11019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 11062 - 11100
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactcg 212  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  11062 ttataaacaacttccattcctaccccaaagaccaactcg 11100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 660 - 572
Alignment:
Q  182 aacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttgactgccagtgagta 271  Q
    ||||| |||||||| |||||| | ||||||  ||| |||||||||| |||||||| |||||  |||||||||||||||||||| ||||||    
T  660 aactttcattcctatcccaag-atcaactcacaacttcacgtgcgacaaagatcgcaagaaccctaaacaaggttgactgccactgagta 572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 41042 - 40934
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||| ||| |||||| | || |||||||||||||| |||||| ||| ||||||||||||||| | | ||||||| |||| || |||||||    
T  41042 caacttgcaacatatcaatattaataataacaacttgaatgatataaacaacgatactttctatatcatacattttccacataaaatatatagcttaaat 40943  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  40942 taaccaaca 40934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 40891 - 40854
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||| |||||||||||||||||||||||||||||||||    
T  40891 ttataaacaacttccattcctaccccaaggaccaactc 40854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 388 - 445
Alignment:
Q  95 atattcacataatatatgtatcttaaattatccaacatcaatattcatattaattcag 152  Q
    |||||||||||||||| |||| | |||||||||||||   ||||||||||||||||||    
T  388 atattcacataatataagtatttcaaattatccaacaaagatattcatattaattcag 445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 181 - 254
Target Start/End: Original strand, 17727 - 17800
Alignment:
Q  181 caacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaagg 254  Q
    |||| ||||||||||||||||||| ||||||  ||| || ||||||| |||||||| |||||  ||||||||||    
T  17727 caacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaagaactctaaacaagg 17800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 2807 - 2707
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| ||||||| |||||  | || |||||||||||||| |||||  |||||| |||||||||||| | | |||||||||||| || |||||||    
T  2807 caacttgcaacatagcaatattaaaaataacaacttgaatgatataaacaatgatattttctatatcatacattttccacataatatatatagcttaaat 2708  T
Q  123 t 123  Q
    |    
T  2707 t 2707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 2656 - 2619
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  2656 ttataaacaacatccattcctaccccaaggaccaactc 2619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1815 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1815
Description:

Target: scaffold1815; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 102
Target Start/End: Original strand, 1269 - 1335
Alignment:
Q  35 atagcaacattaatcacaataacttgaatgatatgaacaacaatatttctatatcatacaatattcac 102  Q
    |||||||||||||| | ||  ||||| ||| ||| ||||||| |||||||||||||||||||||||||    
T  1269 atagcaacattaataataaccacttggatggtat-aacaacattatttctatatcatacaatattcac 1335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0356 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 557 - 502
Alignment:
Q  181 caacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcg 236  Q
    |||| ||||||||||||||||||| ||||||| ||| || ||||||| ||||||||    
T  557 caacctccattcctaccccaaggatcaactcgtaacatctcgtgcgacaaagatcg 502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 85770 - 85825
Alignment:
Q  181 caacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcg 236  Q
    |||| ||||||||||||||||||| ||||||| ||| || ||||||| ||||||||    
T  85770 caacctccattcctaccccaaggatcaactcgtaacatctcgtgcgacaaagatcg 85825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 2941 - 3039
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaaa 121  Q
    ||||| |||| |||| || |||||| | || |||||||||||||| |||||| ||| ||||||||||||||| | | | |||||||||  |||||||||    
T  2941 caacttgcaacatagtaatattaataataacaacttgaatgatataaacaacgatattttctatatcatacattttcctcataatataaatatcttaaa 3039  T

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Target: scaffold0379 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 257
Target Start/End: Complemental strand, 14510 - 14432
Alignment:
Q  179 aacaacttccattcctaccccaaggaccaactcggaacgtcacgtgcgaaaaagatcgtaagaaaactaaacaaggttg 257  Q
    |||||||  ||||||||||||||||||||||||  |||    ||||||| |||||||| |||||  |||||||||||||    
T  14510 aacaactctcattcctaccccaaggaccaactcataactcttcgtgcgacaaagatcgcaagaaccctaaacaaggttg 14432  T

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Target: scaffold0377 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 16785 - 16743
Alignment:
Q  169 tataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||||| || |||||||| ||||||||||||||||||||||||    
T  16785 tataatcattaacaactttcattcctaccccaaggaccaactc 16743  T

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Target: scaffold0149 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 36225 - 36183
Alignment:
Q  169 tataattatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||||| || ||||||||| |||||||||||||||||||||||    
T  36225 tataatcattaacaacttctattcctaccccaaggaccaactc 36183  T

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Target: scaffold0149; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 20888 - 20953
Alignment:
Q  30 gcaatatagcaacattaatcacaataacttgaatgatatgaacaacaat-atttctatatcataca 94  Q
    |||| |||||||||| ||| | || |||||||||||||| ||||| ||| ||||||||||||||||    
T  20888 gcaacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcataca 20953  T

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Target: scaffold0070 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 8292 - 8390
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaa 121  Q
    ||||| |||| ||| ||| |||||| | || |||||||||||||  |||||| |||||| |||||||||||| | | |||||||||||  |||||||||    
T  8292 caacttgcaacatatcaatattaataataacaacttgaatgataataacaacgatattttctatatcatacattttccacataatataaatatcttaaa 8390  T

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Target: scaffold0630 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 8303 - 8368
Alignment:
Q  30 gcaatatagcaacattaatcacaataacttgaatgatatgaacaacaat-atttctatatcataca 94  Q
    |||| |||||||||| ||| | || |||||||||||||| ||||| ||| ||||||||||||||||    
T  8303 gcaacatagcaacatcaataataacaacttgaatgatataaacaataataatttctatatcataca 8368  T

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Target: scaffold0123 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 1942 - 1905
Alignment:
Q  174 ttatgaacaacttccattcctaccccaaggaccaactc 211  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  1942 ttataaacaacttccattcctaccccaaagaccaactc 1905  T

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Target: scaffold1662 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1662
Description:

Target: scaffold1662; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 141
Target Start/End: Complemental strand, 222 - 115
Alignment:
Q  35 atagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataa-tatatgtatcttaaattatccaacat 132  Q
    |||||| ||||||| | || |||||||||||||| ||||||| || ||||||||||||||| | | |||| || |||||||| || ||||||| |||||     
T  222 atagcatcattaataataacaacttgaatgatat-aacaacattattttctatatcatacattttccacaaaattatatgtaactcaaattattcaacaa 124  T
Q  133 caatattca 141  Q
    ||| |||||    
T  123 caacattca 115  T

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Target: scaffold0825 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 1634 - 1534
Alignment:
Q  22 aacaactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacataatatatgtatcttaa 120  Q
    ||||||| |||| ||| ||| |||||| | || |||||||||||||  |||||| ||| ||||||||||| ||| | | |||||||||||  ||||||||    
T  1634 aacaacttgcaacatatcaatattaataataacaacttgaatgataataacaacgatattttctatatcaaacattttccacataatataaatatcttaa 1535  T
Q  121 a 121  Q
    |    
T  1534 a 1534  T

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Target: scaffold0737 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 141
Target Start/End: Complemental strand, 5514 - 5407
Alignment:
Q  35 atagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacat-aatatatgtatcttaaattatccaacat 132  Q
    |||||||||||||| | || |||||||||| ||| ||||||| || ||||||||||||||  | | ||||| |||||||||| || ||||||| |||||     
T  5514 atagcaacattaataataacaacttgaatggtat-aacaacattattttctatatcatactttttccacataaatatatgtaactcaaattattcaacaa 5416  T
Q  133 caatattca 141  Q
    ||| |||||    
T  5415 caacattca 5407  T

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Target: scaffold0737; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 480
Target Start/End: Complemental strand, 6019 - 5951
Alignment:
Q  412 ttctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcagatttcta 480  Q
    ||||||||||||| |||||||||| |||||||||  ||||| ||||| | | |||||| ||| ||||||    
T  6019 ttctaatcattgtgctatgaataatctaaggtctgaacactgtttcttccttaattcaacaggtttcta 5951  T

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Target: scaffold0375 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 141
Target Start/End: Complemental strand, 9104 - 8997
Alignment:
Q  35 atagcaacattaatcacaataacttgaatgatatgaacaacaata-tttctatatcatacaatattcacat-aatatatgtatcttaaattatccaacat 132  Q
    |||||| ||||||| | || |||||||||||||| ||||||| || ||||||||||||||| | | ||||| |||||||||| || || |||| |||||     
T  9104 atagcatcattaataataacaacttgaatgatat-aacaacattattttctatatcatacattttccacataaatatatgtaactcaatttattcaacaa 9006  T
Q  133 caatattca 141  Q
    ||| |||||    
T  9005 caacattca 8997  T

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Target: scaffold0126 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 6034 - 6142
Alignment:
Q  24 caactcgcaatatagcaacattaatcacaataacttgaatgatatgaacaacaatattt-ctatatcatacaatattcacataatatatgtatcttaaat 122  Q
    ||||| |||| |||| || |||||| | || |||||||||||||  |||||| |||||| |||||||| ||| | | |||||||||||  |||||||||     
T  6034 caacttgcaacatagaaatattaataataacaacttgaatgataataacaacgatattttctatatcacacattttccacataatataaatatcttaaac 6133  T
Q  123 tatccaaca 131  Q
    || ||||||    
T  6134 taaccaaca 6142  T

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Target: scaffold0112 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 2132 - 2193
Alignment:
Q  89 catacaatattcacataatatatgtatcttaaattatccaacatcaatattcatattaattcag 152  Q
    ||||||||||||||||||||||||||| | ||  ||||||||  ||||| ||||||||| ||||    
T  2132 catacaatattcacataatatatgtatttcaa--tatccaacgacaatactcatattaaatcag 2193  T

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