View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12672_high_5 (Length: 283)
Name: NF12672_high_5
Description: NF12672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12672_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 273; Significance: 1e-153; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 273; E-Value: 1e-153
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 9433351 - 9433627
Alignment:
| Q |
1 |
agtggtggtggaggtgatggtgtggttgaagttgttgaaccggagccttgcatggggtttttacaaagagagaatttctcgacggagattattgagagta |
100 |
Q |
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| T |
9433351 |
agtggtgttggaggtgatggtgtggttgaagttgttgaaccggagccttgcatggggtttttacaaagagagaatttctcgacggagattattgagagta |
9433450 |
T |
|
| Q |
101 |
tttcgccggaggatcttcaaccgacggtgaagctttgtgtggatggtttacagtcttcttcagtggctgtgaaacggtctgctgcggcgaaattgaggtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9433451 |
tttcgccggaggatcttcaaccgacggtgaagctttgtgtggatggtttacagtcttcttcagtggctgtgaaacggtctgctgcggcgaaattgaggtt |
9433550 |
T |
|
| Q |
201 |
gcttgcaaagaatcgagctgataatcgtgttttgatcggtgaatccggtgctgtacctttgcttgttcctttgcttc |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9433551 |
gcttgcaaagaatcgagctgataatcgtgttttgatcggtgaatccggtgctgtacctttgcttgttcctttgcttc |
9433627 |
T |
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