View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12672_low_7 (Length: 271)
Name: NF12672_low_7
Description: NF12672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12672_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 49 - 258
Target Start/End: Original strand, 38505941 - 38506150
Alignment:
| Q |
49 |
ggaatcagaagtaactgcattgtgactcgaatgaattagtgtaaagtgtagaagacaacattagaagacgaagcttgtgagttgctataaactctcaaac |
148 |
Q |
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| T |
38505941 |
ggaatcaaaagtaacttcattgtgactcgaatgagttagtgtaaagtgtagaagacaacattagaagacgaagcttgtgagttgttataaactctcaaac |
38506040 |
T |
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| Q |
149 |
agattattacatcaagtatccataatgaattttaagcatgttgaattttttaagtgataagctacttgtagagttcatgctcttacatgagcatctaatt |
248 |
Q |
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| T |
38506041 |
agattattacatcaagtatccataatgaattttaagcatgttgaattttttaagtgataagctacttgtagagttcacgctcttacaagagcatctaatt |
38506140 |
T |
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| Q |
249 |
cttatgcttc |
258 |
Q |
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| T |
38506141 |
cttatgcttc |
38506150 |
T |
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