View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12673_low_10 (Length: 333)
Name: NF12673_low_10
Description: NF12673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12673_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 33904811 - 33904495
Alignment:
| Q |
1 |
ctttagcccttgtatgtatatgtaacgtacccaaggaagcatgggagaacagaatttctcttaaagtgaggatcagaagagtaacaacaattcagaaaat |
100 |
Q |
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| T |
33904811 |
ctttagcccttgtatgtatatgtaacgaacccaaggaagcatgggagaacagaatttctcttaaagtgaggatcagaagagtaacaacaattcagaaaat |
33904712 |
T |
|
| Q |
101 |
aatccagttaatagtattttttgtttacatagtaatatagaattgaatgctacatatagaggttgaaggtagttaatttactagacaaaactattttatt |
200 |
Q |
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| T |
33904711 |
aatccagttaatagtattttttgtttacatagtaatatagaattgaatgctacatatagaggttgaaggtagttaatttactagacaaaactattttatt |
33904612 |
T |
|
| Q |
201 |
ttctttagtgatgttagtaaaatcacaggtttaacttcttagctatgcttgctacatcaaatagatgtgctcgattatgcgactaggacggctaaaccaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||| |
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| T |
33904611 |
ttctttagtgatgttagtaaaatcacaggtttaacttcttagctatgcttgctaaatcaaatagatgtgctcaattatgcgactaggacggttaaaccaa |
33904512 |
T |
|
| Q |
301 |
cattttacctaacaaat |
317 |
Q |
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||||||||||||||||| |
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| T |
33904511 |
cattttacctaacaaat |
33904495 |
T |
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