View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12677_low_5 (Length: 326)
Name: NF12677_low_5
Description: NF12677
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12677_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 19 - 308
Target Start/End: Original strand, 45961752 - 45962041
Alignment:
| Q |
19 |
gtactcaagttgaaatgccacctttgatggccattgaggtaataattatgcgattatttgcaattcatatgagtcaatgttatgtttttcctttaaccat |
118 |
Q |
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| T |
45961752 |
gtactcaagttgaaatgccacctttgatggccattgaggtaataattatgcgattatttgcaattcatatgaatcaatgttatgtttttcctttaaccat |
45961851 |
T |
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| Q |
119 |
tcatttttagttcctttgtagggtagctgatgtaatcaatgattatcttggcggattgaatgaagattccatcaaagacaactttgttattgtctatgag |
218 |
Q |
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| T |
45961852 |
tcatttttagttcctttgtagggtagctgatgtaatcaatgattatcttggcggattgaatgaagattccatcaaagacaactttgttattgtctatgag |
45961951 |
T |
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| Q |
219 |
gtgaggctatttctattctatgcaagtgattgtatgtaacaattgggttggttggtgtcagacatcgagatgtgtcgttgcaatagtcac |
308 |
Q |
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| T |
45961952 |
gtgaggctatttctattctatgcaagtgattgtatgtaacaattgggttggttggtgtcagacatcgatatgtgtcgatgcaatagtcac |
45962041 |
T |
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