View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12678_high_9 (Length: 228)
Name: NF12678_high_9
Description: NF12678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12678_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 18 - 215
Target Start/End: Original strand, 45695227 - 45695424
Alignment:
| Q |
18 |
acttgaatacaattactttctctatcaagcaaagaaaatttatttgtggcagcaaagtcatttgttttggcaccaggttcatgtacgaaaccagaactat |
117 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |
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| T |
45695227 |
acttgaatacaattactttttctatcaagcaaagaaaatttatttgtggcagcaaagtcatttgttctggcaccaggttcatgtacgaaacaagaactat |
45695326 |
T |
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| Q |
118 |
aatgtaaagagtgttcatcatccattgcacaattcaaccaaggcatcatcgtcatcaaatcttcatcttgacttgaagaaacaggccttgtaataatt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
45695327 |
aatgtaaagagtgttcatcatccattgcacaattcaaccaaggcatcatcgtcatcaaatcttcatcttgacttgaagaaacagaccttgtaataatt |
45695424 |
T |
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