View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12680_high_15 (Length: 299)

Name: NF12680_high_15
Description: NF12680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12680_high_15
NF12680_high_15
[»] chr8 (1 HSPs)
chr8 (1-299)||(29272340-29272638)
[»] chr6 (62 HSPs)
chr6 (1-299)||(27609622-27609920)
chr6 (1-296)||(27717001-27717296)
chr6 (1-299)||(27697091-27697386)
chr6 (1-299)||(31285941-31286236)
chr6 (1-299)||(27704765-27705054)
chr6 (1-296)||(26647864-26648150)
chr6 (1-296)||(26753832-26754118)
chr6 (73-284)||(26144265-26144473)
chr6 (1-289)||(27529809-27530094)
chr6 (2-299)||(26624653-26624941)
chr6 (2-299)||(26730630-26730918)
chr6 (73-284)||(26057319-26057527)
chr6 (73-284)||(26077289-26077497)
chr6 (73-284)||(25512288-25512496)
chr6 (73-284)||(25581119-25581327)
chr6 (157-296)||(26803831-26803970)
chr6 (73-284)||(25484456-25484664)
chr6 (160-296)||(27603365-27603501)
chr6 (159-296)||(28787623-28787760)
chr6 (1-122)||(28787812-28787933)
chr6 (159-296)||(28793744-28793881)
chr6 (1-122)||(28793933-28794054)
chr6 (24-299)||(26862962-26863228)
chr6 (1-115)||(27603197-27603311)
chr6 (1-122)||(27591517-27591638)
chr6 (72-284)||(27215849-27216058)
chr6 (1-122)||(27676116-27676237)
chr6 (1-122)||(27680521-27680642)
chr6 (40-296)||(27426156-27426409)
chr6 (159-296)||(26885452-26885589)
chr6 (12-122)||(26885641-26885751)
chr6 (159-299)||(27680332-27680472)
chr6 (57-122)||(26850283-26850348)
chr6 (43-122)||(25075438-25075517)
chr6 (2-121)||(26804018-26804137)
chr6 (12-122)||(26657533-26657643)
chr6 (12-122)||(26763504-26763614)
chr6 (1-122)||(25491809-25491930)
chr6 (2-122)||(26813108-26813228)
chr6 (43-122)||(26978939-26979018)
chr6 (12-122)||(2186376-2186486)
chr6 (12-122)||(26637199-26637309)
chr6 (12-122)||(26743165-26743275)
chr6 (73-122)||(25546539-25546588)
chr6 (1-122)||(26951302-26951423)
chr6 (1-122)||(27663705-27663826)
chr6 (12-122)||(26960684-26960794)
chr6 (155-299)||(26825201-26825345)
chr6 (61-132)||(26825374-26825445)
chr6 (58-132)||(28141087-28141161)
chr6 (156-289)||(25491976-25492109)
chr6 (57-122)||(29827548-29827613)
chr6 (154-214)||(26657429-26657489)
chr6 (154-214)||(26763400-26763460)
chr6 (54-122)||(26938582-26938650)
chr6 (58-122)||(28150734-28150798)
chr6 (57-121)||(29842547-29842611)
chr6 (244-299)||(27663959-27664014)
chr6 (205-299)||(27591727-27591821)
chr6 (156-287)||(26938423-26938554)
chr6 (205-296)||(27676326-27676417)
chr6 (72-122)||(28097022-28097072)
[»] scaffold0349 (1 HSPs)
scaffold0349 (1-296)||(2041-2336)
[»] chr1 (7 HSPs)
chr1 (11-299)||(266861-267140)
chr1 (15-224)||(28126200-28126400)
chr1 (4-122)||(26137441-26137559)
chr1 (154-296)||(28132156-28132298)
chr1 (157-296)||(26137273-26137412)
chr1 (20-122)||(5921996-5922098)
chr1 (20-122)||(28132016-28132118)
[»] scaffold0277 (4 HSPs)
scaffold0277 (159-296)||(3372-3509)
scaffold0277 (159-296)||(12335-12472)
scaffold0277 (1-121)||(3205-3325)
scaffold0277 (1-121)||(12168-12288)
[»] scaffold1870 (2 HSPs)
scaffold1870 (159-296)||(154-291)
scaffold1870 (1-122)||(340-461)
[»] scaffold0419 (2 HSPs)
scaffold0419 (159-296)||(8872-9009)
scaffold0419 (1-122)||(9058-9179)
[»] scaffold0003 (1 HSPs)
scaffold0003 (40-296)||(60954-61207)
[»] chr4 (10 HSPs)
chr4 (40-296)||(18075146-18075399)
chr4 (59-122)||(18654042-18654105)
chr4 (59-122)||(18678122-18678185)
chr4 (59-122)||(18688179-18688242)
chr4 (59-122)||(18697965-18698028)
chr4 (59-122)||(18730060-18730123)
chr4 (246-296)||(18688369-18688419)
chr4 (246-296)||(18698143-18698193)
chr4 (246-296)||(18722828-18722878)
chr4 (246-296)||(18730247-18730297)
[»] chr2 (1 HSPs)
chr2 (54-121)||(17991755-17991822)
[»] chr5 (1 HSPs)
chr5 (248-284)||(16692264-16692300)


Alignment Details
Target: chr8 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 29272340 - 29272638
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29272340 gtgttttctcttaaaacacgaactagatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 29272439  T
Q  101 tgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgca 200  Q
    ||||| ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29272440 tgtcccctatcaaatcatgcaacattacataatggccatattcccaatattggtctatgagagatttttcagccaatactcctagatgatgtgttatgca 29272539  T
Q  201 atggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttc 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29272540 atggccataatgagaatgaagtatatatttggcatcttcccattcacaacctttgaagcaacaagcaatgtccagaaagacactttgttgctcttcttc 29272638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 255; Significance: 1e-142; HSPs: 62)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 27609622 - 27609920
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27609622 gtgttttctcttaaaacacgaactatatcatcctgacagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 27609721  T
Q  101 tgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgca 200  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27609722 tgtcctctatcaagtcatgtaacatcacataatcgcgatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgga 27609821  T
Q  201 atggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttc 299  Q
    |||||||||||||||||||||| |||| || ||||||||||| | | |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27609822 atggccataatgagaatgaagtgtatactttgcatcttcccaattatatcctttgaagcaacaagcaatgtccagaaagacactttgctcctcttcttc 27609920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 27717001 - 27717296
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27717001 gtgttttctcttaaaacacgaactatatcatcctgacagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 27717100  T
Q  101 tgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgca 200  Q
    ||||||||||||||||||||||||||||||||| | |||||||||   |||  | |||||||||||||||| ||||||||||||||||||||||||||||    
T  27717101 tgtcctctatcaagtcatgtaacatcacataatcgtcatattcccgtaatttctttatgagagatttttcaaccaacactcctagatgatgtgttatgca 27717200  T
Q  201 atggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  27717201 atggccataatgagaattaagtatatatttggcatcttcccatttacatcttttgaagcaacaagcaatgtctagaaagacactttgctgctcttc 27717296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 27697091 - 27697386
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||||||||||||| |||  |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27697091 gtgttttctcttaaaacccgagttatatcatcctgacagcataacctacttctttctccaggctctttagttgattcttgtcggacgacttctttaccca 27697190  T
Q  101 tgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgca 200  Q
    ||||||||||||||||||||||  ||||| ||   |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||| |    
T  27697191 tgtcctctatcaagtcatgtaatgtcacacaa---ccatattccctatattggtttatgagagatttttcagccaacactgctagatgatgtgttatgga 27697287  T
Q  201 atggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttc 299  Q
    |||||||||||||| |||||| ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27697288 atggccataatgagcatgaagcatatatttggcatcttcccatccatgtcctttgaagcaacaagcaatgtccagaaagacactttgctcctcttcttc 27697386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 31286236 - 31285941
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||||  ||||| || ||||||||||||| || || |||| ||||||||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  31286236 gtgttttcatttaaagcatgaactatatcatcttgacaccatagcctacttctttctcctggctctttaggtgattcttgtcggacgacttctttaccca 31286137  T
Q  101 tgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgca 200  Q
    ||||||||||||||||||||||   |||| ||    |||||||||||    ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31286136 tgtcctctatcaagtcatgtaatcccacacaaccatcatattcccaac---ggtctatgagagatttttcagccaacacttctagatgatgtgttatgca 31286040  T
Q  201 atggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttc 299  Q
    |||||||||||||| ||| ||||||| |||| ||||  ||||| | |||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  31286039 atggccataatgagcatggagtatatctttgacatccgcccatccgcatcctttgaagcaacaagcaatgtccagaaagacactctgctcctcttcttc 31285941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 27704765 - 27705054
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||||| |||| |||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27704765 gtgttttcttttaagacattaactatatcatcatggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 27704864  T
Q  101 tgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgca 200  Q
    | ||||||||||||| ||||||  ||||||||   | ||      ||| |  ||||||||| || |||||||||||||||| ||||||||||||||| ||    
T  27704865 tatcctctatcaagttatgtaatgtcacataa---caat------aatttgtgtctatgagtgacttttcagccaacactcgtagatgatgtgttataca 27704955  T
Q  201 atggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttc 299  Q
    |||| ||||||||||||||||||||| ||   | |||  | ||  | | ||||| ||||||||||||||||| ||||||||||| |||| |||||||||    
T  27704956 atggtcataatgagaatgaagtatattttcaacctctgtcaatctatacccttttaagcaacaagcaatgtcaagaaagacactctgctcctcttcttc 27705054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 26648150 - 26647864
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||||| |||||||| ||||||| ||||| || || ||||||||||||  ||||||||||||||||  ||||||||||||||| ||||| |||||||    
T  26648150 gtgttttcttttaaaacatgaactatttcatcttgacaccataacctactttgttctccaggctctttacgtgattcttgtcggactacttccttaccca 26648051  T
Q  101 tgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgca 200  Q
    |||||| |||||||||||||||  ||| ||||   ||||       || |||||  |||||||||||||||||||||||||| |||||||||||||||||    
T  26648050 tgtcctttatcaagtcatgtaatctcagataa---ccat------gattttggtaaatgagagatttttcagccaacactccaagatgatgtgttatgca 26647960  T
Q  201 atggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    ||||||||||||| || ||||||||| ||     || ||||||  ||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  26647959 atggccataatgataacgaagtatatcttcaaactcctcccatctacatcctttgaagcaacaagcaatgtctagaaagacactctgctgctcttc 26647864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 26754118 - 26753832
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||||| |||||||| ||||||| ||||| || || ||||||||||||  ||||||||||||||||  ||||||||||||||| ||||| |||||||    
T  26754118 gtgttttcttttaaaacatgaactatttcatcttgacaccataacctactttgttctccaggctctttacgtgattcttgtcggactacttccttaccca 26754019  T
Q  101 tgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgca 200  Q
    |||||| |||||||||||||||  ||| ||||   ||||       || |||||  |||||||||||||||||||||||||| |||||||||||||||||    
T  26754018 tgtcctttatcaagtcatgtaatctcagataa---ccat------gattttggtaaatgagagatttttcagccaacactccaagatgatgtgttatgca 26753928  T
Q  201 atggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    ||||||||||||| || ||||||||| ||     || ||||||  ||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  26753927 atggccataatgataacgaagtatatcttcaaactcctcccatctacatcctttgaagcaacaagcaatgtctagaaagacactctgctgctcttc 26753832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 73 - 284
Target Start/End: Complemental strand, 26144473 - 26144265
Alignment:
Q  73 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcag 172  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||  | |||||||||||   ||| ||||||||||||||||||    
T  26144473 gattcttgtcggacgatttctttacccatgtcctctatcaagtcatgtaaggtcacataagtgtcatattcccaa---tggcctatgagagatttttcag 26144377  T
Q  173 ccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtc 272  Q
    |||||||||| | |||||||  |||||||||||||||||||| ||||||||| | |||  | | |  ||||||||| |||||||||||||||||||||||    
T  26144376 ccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttttttaacctttgtccattcacaccctttgaagcaacaagcaatgtc 26144277  T
Q  273 cagaaagacact 284  Q
     |||||||||||    
T  26144276 tagaaagacact 26144265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 27529809 - 27530094
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||| | |||||||| |||||||||||  ||   | || |||||||| | |||||||||||| |    |||||||||||||||||||||||||||||    
T  27529809 gtgtttttttttaaaacatgaactatatcacgctcaaaccacaacctactgcgttctccaggctcatcgggtgattcttgtcggacgacttctttaccca 27529908  T
Q  101 tgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgca 200  Q
    ||||||||||||||||||||||  ||||||||    |||||| | |||   |||| |||||||||||||||||||| ||| | | |||||||  ||||||    
T  27529909 tgtcctctatcaagtcatgtaatgtcacataactatcatatttcaaat---ggtccatgagagatttttcagccaaaactgcaacatgatgtactatgca 27530005  T
Q  201 atggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgct 289  Q
    ||| |||||||||| ||||||||| | |||| | |||  ||||| ||| ||||||||||||||||||||||| ||||||||||||||||    
T  27530006 atgaccataatgagcatgaagtatttctttgacctctggccatttacaccctttgaagcaacaagcaatgtctagaaagacactttgct 27530094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 2 - 299
Target Start/End: Complemental strand, 26624941 - 26624653
Alignment:
Q  2 tgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccat 101  Q
    |||||||| |||||||| ||| ||||||||| || || ||||| ||||||| ||||||||||||||||  ||||||||||||||||| | ||||||||||    
T  26624941 tgttttcttttaaaacatgaaatatatcatcttgacaccataatctacttcgttctccaggctctttaggtgattcttgtcggacgattgctttacccat 26624842  T
Q  102 gtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaa 201  Q
    |||||||||||||||||||||  ||| || |   ||||      || |||| | ||||||| |||| ||| |||||||||||||||||||||||||||||    
T  26624841 gtcctctatcaagtcatgtaaggtcatatca---ccat------aagattgatatatgagacatttgtcaaccaacactcctagatgatgtgttatgcaa 26624751  T
Q  202 tggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttc 299  Q
    ||||||||||||| | |||| |||| || |   ||   |||| ||||||||||  ||||||||||||| || ||||||||||| |||| |||||||||    
T  26624750 tggccataatgagcacgaagcatatcttcgaactccctccatccacatcctttcgagcaacaagcaatatctagaaagacactctgctcctcttcttc 26624653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 2 - 299
Target Start/End: Complemental strand, 26730918 - 26730630
Alignment:
Q  2 tgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccat 101  Q
    |||||||| |||||||| ||| ||||||||| || || ||||| ||||||| ||||||||||||||||  ||||||||||||||||| | ||||||||||    
T  26730918 tgttttcttttaaaacatgaaatatatcatcttgacaccataatctacttcgttctccaggctctttaggtgattcttgtcggacgattgctttacccat 26730819  T
Q  102 gtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaa 201  Q
    |||||||||||||||||||||  ||| || |   ||||      || |||| | ||||||| |||| ||| |||||||||||||||||||||||||||||    
T  26730818 gtcctctatcaagtcatgtaaggtcatatca---ccat------aagattgatatatgagacatttgtcaaccaacactcctagatgatgtgttatgcaa 26730728  T
Q  202 tggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttc 299  Q
    ||||||||||||| | |||| |||| || |   ||   |||| ||||||||||  ||||||||||||| || ||||||||||| |||| |||||||||    
T  26730727 tggccataatgagcacgaagcatatcttcgaactccctccatccacatcctttcgagcaacaagcaatatctagaaagacactctgctcctcttcttc 26730630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 73 - 284
Target Start/End: Complemental strand, 26057527 - 26057319
Alignment:
Q  73 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcag 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |  | |||||||||||   ||| ||||||||||||||||||    
T  26057527 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaa---tggcctatgagagatttttcag 26057431  T
Q  173 ccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtc 272  Q
    |||||||||| | |||||||  ||||  |||||||||||||| ||||||||| | |||  | | |  ||||| ||| |||||||||||||||||||||||    
T  26057430 ccaacactccaacatgatgttctatgggatggccataatgagcatgaagtatttttttaacctttgtccatttacaccctttgaagcaacaagcaatgtc 26057331  T
Q  273 cagaaagacact 284  Q
     |||||||||||    
T  26057330 tagaaagacact 26057319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 73 - 284
Target Start/End: Complemental strand, 26077497 - 26077289
Alignment:
Q  73 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcag 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |  | |||||||||||   ||| ||||||||||||||||||    
T  26077497 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaa---tggcctatgagagatttttcag 26077401  T
Q  173 ccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtc 272  Q
    |||||||||| | |||||||  ||||  |||||||||||||| ||||||||| | |||  | | |  ||||| ||| |||||||||||||||||||||||    
T  26077400 ccaacactccaacatgatgttctatgggatggccataatgagcatgaagtatttttttaacctttgtccatttacaccctttgaagcaacaagcaatgtc 26077301  T
Q  273 cagaaagacact 284  Q
     |||||||||||    
T  26077300 tagaaagacact 26077289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 73 - 284
Target Start/End: Complemental strand, 25512496 - 25512288
Alignment:
Q  73 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcag 172  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||  ||||||||  | ||||||||||||   || ||||||||||||||||||    
T  25512496 gattcttgtcggacggtttctttacccatgtcctctatcaagtcatgtaaggtcacataagtgtcatattcccaat---ggcctatgagagatttttcag 25512400  T
Q  173 ccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtc 272  Q
    |||||||||| | |||||||  |||||||||||||||||||| ||||||||| | |||  | | |  ||||| | | ||||||||| |||||||||||||    
T  25512399 ccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtattttttttacttttgtccatttataccctttgaagtaacaagcaatgtc 25512300  T
Q  273 cagaaagacact 284  Q
     |||||||||||    
T  25512299 tagaaagacact 25512288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 73 - 284
Target Start/End: Complemental strand, 25581327 - 25581119
Alignment:
Q  73 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcag 172  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||  |||  | |  | ||||||||||||   || ||||||||||||||||||    
T  25581327 gattcttgtcggacgatttctttacccatgtcctctatcaagtcatgtaaggtcatctgagtgtcatattcccaat---ggcctatgagagatttttcag 25581231  T
Q  173 ccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtc 272  Q
    |||||||||| | |||||||  |||||||||||||||||||| ||||||||| | |||  | | |  ||||| ||| |||||||||||||||||||||||    
T  25581230 ccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttttttaacctttgtccatttacaccctttgaagcaacaagcaatgtc 25581131  T
Q  273 cagaaagacact 284  Q
     |||||||||||    
T  25581130 tagaaagacact 25581119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 157 - 296
Target Start/End: Complemental strand, 26803970 - 26803831
Alignment:
Q  157 atgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttga 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||     || |||||| ||||||||||||    
T  26803970 atgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgaacatgaagtatatcttcaaactcctcccatccacatcctttga 26803871  T
Q  257 agcaacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  26803870 agcaacaagcaatgtctagaaagacactctgctgctcttc 26803831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 73 - 284
Target Start/End: Complemental strand, 25484664 - 25484456
Alignment:
Q  73 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcag 172  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||  | ||||||||||||   |  |||||||| |||||||||    
T  25484664 gattcttgtcgaacgacttctttacccatgtcctctatcaagtcatgtaaggtcacataagtgtcatattcccaat---gacctatgagacatttttcag 25484568  T
Q  173 ccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtc 272  Q
    |||||||||| | |||||||  |||||||||||||||||||| ||||||||| | |||  | | |  ||||| | | ||||||||| |||||||||||||    
T  25484567 ccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtattttttttacttttgtccatttataccctttgaagtaacaagcaatgtc 25484468  T
Q  273 cagaaagacact 284  Q
     |||||||||||    
T  25484467 tagaaagacact 25484456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 160 - 296
Target Start/End: Original strand, 27603365 - 27603501
Alignment:
Q  160 agagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagc 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||   |  ||||| || |||||||||||||||    
T  27603365 agagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagtatatcttcaaccacttccaatccacatcctttgaagc 27603464  T
Q  260 aacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  27603465 aacaagcaatgtctagaaagacactctgctgctcttc 27603501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 28787760 - 28787623
Alignment:
Q  159 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaag 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||     || ||||| |||||||||||||||    
T  28787760 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagtatatcttcaaactcctcccactcacatcctttgaag 28787661  T
Q  259 caacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    ||||| |||||||| ||||| |||||||| ||||||||    
T  28787660 caacatgcaatgtctagaaaaacactttgttgctcttc 28787623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 28787933 - 28787812
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||||| ||||||||  |||||||||||| || || ||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  28787933 gtgttttcttttaaaacattaactatatcatcttgacaccataacctacttctttctccaggctctttaggcgattcttgtcggacgacttctttaccca 28787834  T
Q  101 tgtcctctatcaagtcatgtaa 122  Q
    |||| |||||||||||||||||    
T  28787833 tgtcttctatcaagtcatgtaa 28787812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 28793881 - 28793744
Alignment:
Q  159 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaag 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||     || ||||| |||||||||||||||    
T  28793881 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagtatatcttcaaactcctcccactcacatcctttgaag 28793782  T
Q  259 caacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    ||||| |||||||| ||||| |||||||| ||||||||    
T  28793781 caacatgcaatgtctagaaaaacactttgttgctcttc 28793744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 28794054 - 28793933
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||||| ||||||||  |||||||||||| || || ||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  28794054 gtgttttcttttaaaacattaactatatcatcttgacaccataacctacttctttctccaggctctttaggcgattcttgtcggacgacttctttaccca 28793955  T
Q  101 tgtcctctatcaagtcatgtaa 122  Q
    |||| |||||||||||||||||    
T  28793954 tgtcttctatcaagtcatgtaa 28793933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 299
Target Start/End: Complemental strand, 26863228 - 26862962
Alignment:
Q  24 tatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaac 123  Q
    ||||||||| || || ||||||||||||| ||| || |||||||||   |||||||||||||||| |||||| ||||||||||||||||||||||||||     
T  26863228 tatatcatcatgacaccataacctacttcgttcacccggctctttaggagattcttgtcggacgatttctttgcccatgtcctctatcaagtcatgtaat 26863129  T
Q  124 atcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagta 223  Q
     |||||  | | ||         |||||||| ||||||||||||||||||||||||||| | ||||||| |||||||  ||||||||||| | | |||||    
T  26863128 ctcacactaagacc---------atattggtatatgagagatttttcagccaacactccaacatgatgttttatgcatcggccataatgatatttaagta 26863038  T
Q  224 tatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttc 299  Q
    ||| || |   |||  |||   ||  |||||||| ||||||||||| || ||||||||||||||||||||||||||    
T  26863037 tatcttcgaattctatccagctaccccctttgaaacaacaagcaatatctagaaagacactttgctgctcttcttc 26862962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 27603197 - 27603311
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||||| ||| |||| |||||||||| || || || ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  27603197 gtgttttctgttagaacatgaactatatcgtcttgacaccataacctacttctttctccaggctctttaggtgattcttgtcggacgacttctttaccca 27603296  T
Q  101 tgtcctctatcaagt 115  Q
    |||||||||||||||    
T  27603297 tgtcctctatcaagt 27603311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 27591517 - 27591638
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||||| |||||||| ||||||||||||| ||  | |||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  27591517 gtgttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctctttaggtgattcttgtcggacgacttctttaccca 27591616  T
Q  101 tgtcctctatcaagtcatgtaa 122  Q
    || |||||||||| ||||||||    
T  27591617 tgacctctatcaattcatgtaa 27591638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 284
Target Start/End: Complemental strand, 27216058 - 27215849
Alignment:
Q  72 tgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttca 171  Q
    ||||||||||||||| |||||| ||||||| ||||||||||||||||||||  ||| ||||    ||| |||||  |   |||  ||||||||||||||     
T  27216058 tgattcttgtcggacaacttctctacccatatcctctatcaagtcatgtaatctcatataactatcattttcccggt---ggttaatgagagatttttcg 27215962  T
Q  172 gccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgt 271  Q
    ||||||||| | | ||||||| ||||||||||||||||||| | ||||||||||| |||| | | |  ||||| ||| ||||||||||||||||||||||    
T  27215961 gccaacacttcaacatgatgttttatgcaatggccataatgggcatgaagtatatctttgacctttgtccatttacaccctttgaagcaacaagcaatgt 27215862  T
Q  272 ccagaaagacact 284  Q
    | |||||||||||    
T  27215861 ctagaaagacact 27215849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 27676116 - 27676237
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||||| |||||||| ||||||||||||| ||  | |||||||| |||||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  27676116 gtgttttctgttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctctttaggtgattcttgtcggaccacttctttaccca 27676215  T
Q  101 tgtcctctatcaagtcatgtaa 122  Q
    || |||||||||| ||||||||    
T  27676216 tgacctctatcaattcatgtaa 27676237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 27680642 - 27680521
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||||| |||||||| ||| |||||| || || |  ||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||    
T  27680642 gtgttttcttttaaaacatgaattatatcttcttgacgccataacctacttcgttctccaggctctttaggtgattcttgtcggacgacttctttaccca 27680543  T
Q  101 tgtcctctatcaagtcatgtaa 122  Q
    |||||| |||||||||||||||    
T  27680542 tgtcctttatcaagtcatgtaa 27680521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 40 - 296
Target Start/End: Original strand, 27426156 - 27426409
Alignment:
Q  40 cataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatggccat 139  Q
    |||||||| ||||||| |||||||||   |  ||||||| ||||||||| |||||||||||||| ||||||||||| ||||||   ||||| |    | |    
T  27426156 cataacctgcttctttttccaggctcaaaaggtgattctagtcggacgagttctttacccatgttctctatcaagttatgtaatgacacatgactatcgt 27426255  T
Q  140 attcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttc 239  Q
    ||||  |||   |||| |||||| |||||||| | | |||| | | ||||||  |||||||||| |||||||||| ||||||||| | |||| | | |||    
T  27426256 attcaaaat---ggtcaatgagacatttttcaactagcacttcaacatgatgatttatgcaatgaccataatgagcatgaagtatttctttgaccttttc 27426352  T
Q  240 ccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    ||||| ||| ||||||||||||||||||||||| |||||||||||||||| ||||||    
T  27426353 ccatttacaacctttgaagcaacaagcaatgtctagaaagacactttgctcctcttc 27426409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 26885589 - 26885452
Alignment:
Q  159 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaag 258  Q
    ||||||||||||  |||||||||| | ||||||| ||||||||||||||||||||| ||||||||||| || | | |||  ||||| ||| |||||||||    
T  26885589 gagagatttttcgaccaacactccaacatgatgttttatgcaatggccataatgagcatgaagtatatcttcgacctctgtccatttacaccctttgaag 26885490  T
Q  259 caacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    |||||||| || ||||||||||||||||||| ||||||    
T  26885489 caacaagctatatccagaaagacactttgctcctcttc 26885452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 26885751 - 26885641
Alignment:
Q  12 taaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatc 111  Q
    ||||||| ||||||||||||| || || ||||||||||| | |||||||||||||||| |||||||||| || |||| |||||||||||||||||||| |    
T  26885751 taaaacatgaactatatcatcgtgacaccataacctactacgttctccaggctctttacttgattcttgccgaacgatttctttacccatgtcctctacc 26885652  T
Q  112 aagtcatgtaa 122  Q
    |||||||||||    
T  26885651 aagtcatgtaa 26885641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 159 - 299
Target Start/End: Complemental strand, 27680472 - 27680332
Alignment:
Q  159 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaag 258  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |  |||||||| || |   || | ||||| | |||||||||||    
T  27680472 gagagattttccagccaacactcctagatgatgtgttatgcaatggtcataatgagcacaaagtatatcttcgaactccttccattgatatcctttgaag 27680373  T
Q  259 caacaagcaatgtccagaaagacactttgctgctcttcttc 299  Q
    || ||||| ||||| ||||||||||| |||| |||||||||    
T  27680372 cagcaagcgatgtcaagaaagacactctgctcctcttcttc 27680332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 57 - 122
Target Start/End: Complemental strand, 26850348 - 26850283
Alignment:
Q  57 tccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 122  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26850348 tccaggctctttaattgattcttgtcggacgatttctttacccatgtcctctatcaagtcatgtaa 26850283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 122
Target Start/End: Complemental strand, 25075517 - 25075438
Alignment:
Q  43 aacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 122  Q
    |||||||| | |||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||    
T  25075517 aacctactacgttctccaggctctttaattgattcatgtcggacgatttctttacccatgtcctctaacaagtcatgtaa 25075438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 26804137 - 26804018
Alignment:
Q  2 tgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccat 101  Q
    |||||||| ||| |||| |||||||||| || || |  ||||||||||||| || | |||| ||||||  ||||||||||||||||||||||||||||||    
T  26804137 tgttttcttttataacatgaactatatcttcatgacgccataacctacttcgtttttcaggatctttaggtgattcttgtcggacgacttctttacccat 26804038  T
Q  102 gtcctctatcaagtcatgta 121  Q
    ||||| ||||||||||||||    
T  26804037 gtcctttatcaagtcatgta 26804018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 26657643 - 26657533
Alignment:
Q  12 taaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatc 111  Q
    ||||||| ||||||| ||||  || || ||||||||||| | |||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  26657643 taaaacatgaactatgtcattgtgacaccataacctactacgttctccgggctctttacttgattcttgtcggacgatttctttacccatgtcctctatc 26657544  T
Q  112 aagtcatgtaa 122  Q
    || || |||||    
T  26657543 aaatcgtgtaa 26657533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 26763614 - 26763504
Alignment:
Q  12 taaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatc 111  Q
    ||||||| ||||||| ||||  || || ||||||||||| | |||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  26763614 taaaacatgaactatgtcattgtgacaccataacctactacgttctccgggctctttacttgattcttgtcggacgatttctttacccatgtcctctatc 26763515  T
Q  112 aagtcatgtaa 122  Q
    || || |||||    
T  26763514 aaatcgtgtaa 26763504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 25491809 - 25491930
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    |||||||||||||||||  |||| ||||||||  | || || |||||||| | ||||||||| || |||  |||||||||||| ||||||||||||||||    
T  25491809 gtgttttctcttaaaacttgaaccatatcatcgggacaccacaacctactacgttctccaggatcattacgtgattcttgtcgaacgacttctttaccca 25491908  T
Q  101 tgtcctctatcaagtcatgtaa 122  Q
    ||| ||||||||||| ||||||    
T  25491909 tgtgctctatcaagttatgtaa 25491930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 26813228 - 26813108
Alignment:
Q  2 tgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccat 101  Q
    |||||||| |||||||| ||||||||||||| || || |||| |||||||| |||||| || |||| |  |||||||||| |||| | |||||||||| |    
T  26813228 tgttttcttttaaaacatgaactatatcatcttgacaccatagcctacttcgttctcctggttcttcaggtgattcttgttggacaatttctttacccgt 26813129  T
Q  102 gtcctctatcaagtcatgtaa 122  Q
    || ||||||||||||||||||    
T  26813128 gtgctctatcaagtcatgtaa 26813108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 43 - 122
Target Start/End: Complemental strand, 26979018 - 26978939
Alignment:
Q  43 aacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 122  Q
    |||||||| | ||||||||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||    
T  26979018 aacctactgcgttctccaggttctttaattgattcttgtcggacgatttctatacccatatcctctatcaagtaatgtaa 26978939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 2186486 - 2186376
Alignment:
Q  12 taaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatc 111  Q
    ||||||| |||||||||| || ||| | || |||||||| | || ||||||||||||   |||||||||||| |||| |||||||||||| |||||||||    
T  2186486 taaaacaggaactatatcttcatgggaccacaacctactacgttttccaggctcttttggtgattcttgtcgtacgatttctttacccatttcctctatc 2186387  T
Q  112 aagtcatgtaa 122  Q
    |||||||||||    
T  2186386 aagtcatgtaa 2186376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 26637309 - 26637199
Alignment:
Q  12 taaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatc 111  Q
    ||||||| |||||||||| || || || || |||||||| | |||||||||||  |||  ||||||||||||||||| |||| ||||||| |||||||||    
T  26637309 taaaacatgaactatatcgtcatgacaccacaacctactgcgttctccaggcttattacgtgattcttgtcggacgatttctatacccatatcctctatc 26637210  T
Q  112 aagtcatgtaa 122  Q
    |||||||||||    
T  26637209 aagtcatgtaa 26637199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 26743275 - 26743165
Alignment:
Q  12 taaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatc 111  Q
    ||||||| |||||||||| || || || || |||||||| | |||||||||||  |||  ||||||||||||||||| |||| ||||||| |||||||||    
T  26743275 taaaacatgaactatatcgtcatgacaccacaacctactgcgttctccaggcttattacgtgattcttgtcggacgatttctatacccatatcctctatc 26743176  T
Q  112 aagtcatgtaa 122  Q
    |||||||||||    
T  26743175 aagtcatgtaa 26743165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 25546588 - 25546539
Alignment:
Q  73 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25546588 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 25546539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 26951423 - 26951302
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    |||||||||  ||||||| |||| ||||||||  |  | || |||||||| | ||||||||| ||| |||||||||||||||||| || |||| ||||||    
T  26951423 gtgttttcttgtaaaacatgaacaatatcatcacgagaccacaacctactgcgttctccaggttctctaattgattcttgtcggatgatttctataccca 26951324  T
Q  101 tgtcctctatcaagtcatgtaa 122  Q
    | ||||||||||||||||||||    
T  26951323 tatcctctatcaagtcatgtaa 26951302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 27663705 - 27663826
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||| | |||||||| || |||||||||| || |  || |||||| | |  |||||||||||||||||||||||||||||||| | |||| ||||||    
T  27663705 gtgttttgttttaaaacatgagctatatcatcatgacgccacaacctagtgcgctctccaggctctttaattgattcttgtcggactatttctataccca 27663804  T
Q  101 tgtcctctatcaagtcatgtaa 122  Q
    | | ||||||||||||||||||    
T  27663805 tatactctatcaagtcatgtaa 27663826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 26960794 - 26960684
Alignment:
Q  12 taaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatc 111  Q
    ||||||| |||||||||||||  | || || |||||||| | || ||||||||||||||||||||| ||||| || | |||  ||||||| |||||||||    
T  26960794 taaaacatgaactatatcatcacgacaccacaacctactgcgttttccaggctctttaattgattcctgtcgaacaatttccatacccatatcctctatc 26960695  T
Q  112 aagtcatgtaa 122  Q
    |||||||||||    
T  26960694 aagtcatgtaa 26960684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 299
Target Start/End: Complemental strand, 26825345 - 26825201
Alignment:
Q  155 ctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatccttt 254  Q
    |||||||||||||||| |||||||||   | ||||||| ||||||||||||| ||||||| | ||||||||| || |   || |||||   |  | ||||    
T  26825345 ctatgagagatttttctgccaacacttgaacatgatgttttatgcaatggccgtaatgagtacgaagtatatcttcgaactcctcccaactatgttcttt 26825246  T
Q  255 gaagcaacaagcaatgtccagaaagacactttgctgctcttcttc 299  Q
    |||||||||||||||||| || || |||||||| |||||||||||    
T  26825245 gaagcaacaagcaatgtcgaggaaaacactttgttgctcttcttc 26825201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 26825445 - 26825374
Alignment:
Q  61 ggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataa 132  Q
    |||||||||  ||||| ||||||||| |||||||| |||||||||| |||||||||||||||  ||||||||    
T  26825445 ggctctttagatgattgttgtcggactacttctttgcccatgtcctttatcaagtcatgtaatgtcacataa 26825374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 28141161 - 28141087
Alignment:
Q  58 ccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataa 132  Q
    |||||||||||   |||||||||||| || | |||||||||||| ||||||||||||||||||||  ||||||||    
T  28141161 ccaggctcttttggtgattcttgtcgaacaatttctttacccatctcctctatcaagtcatgtaatgtcacataa 28141087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 289
Target Start/End: Original strand, 25491976 - 25492109
Alignment:
Q  156 tatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttg 255  Q
    ||||| |||||||| |||||||  ||| |||||||   ||| ||||||||||||||||  ||||||||||| |||| ||||  ||||||  || ||||||    
T  25491976 tatgaaagattttttagccaactttccaagatgatagtttacgcaatggccataatgatcatgaagtatatttttgacatccgcccatttccaacctttg 25492075  T
Q  256 aagcaacaagcaatgtccagaaagacactttgct 289  Q
    ||| ||||||  ||||| ||||||| ||| ||||    
T  25492076 aagaaacaagtcatgtctagaaagatactctgct 25492109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 122
Target Start/End: Complemental strand, 29827613 - 29827548
Alignment:
Q  57 tccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 122  Q
    ||||||||||||   |||||||||||| || | ||||||||||||||| |||||||||||||||||    
T  29827613 tccaggctctttcggtgattcttgtcgtacaatttctttacccatgtcttctatcaagtcatgtaa 29827548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 26657489 - 26657429
Alignment:
Q  154 tctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgag 214  Q
    |||||||||||||||||| |||||||||| | ||||||| |||||||||| ||||| ||||    
T  26657489 tctatgagagatttttcaaccaacactccaacatgatgttttatgcaatgaccatagtgag 26657429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 26763460 - 26763400
Alignment:
Q  154 tctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgag 214  Q
    |||||||||||||||||| |||||||||| | ||||||| |||||||||| ||||| ||||    
T  26763460 tctatgagagatttttcaaccaacactccaacatgatgttttatgcaatgaccatagtgag 26763400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 26938650 - 26938582
Alignment:
Q  54 ttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 122  Q
    |||||||| |||||| | |||||||||||  || | |||||||||||||||||| ||||||||||||||    
T  26938650 ttctccagcctctttgactgattcttgtctaacaatttctttacccatgtcctcaatcaagtcatgtaa 26938582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 58 - 122
Target Start/End: Complemental strand, 28150798 - 28150734
Alignment:
Q  58 ccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 122  Q
    |||||||||||   |||||||||||| || | ||||||||||||||| |||||||||||||||||    
T  28150798 ccaggctcttttggtgattcttgtcgtacaatttctttacccatgtcttctatcaagtcatgtaa 28150734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 29842547 - 29842611
Alignment:
Q  57 tccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgta 121  Q
    ||||||||||||  |||||||| |||| || | ||||||||||||||| ||||||||||||||||    
T  29842547 tccaggctctttcgttgattctggtcgtacaatttctttacccatgtcttctatcaagtcatgta 29842611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 27663959 - 27664014
Alignment:
Q  244 tcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttc 299  Q
    |||||||||||||||||||||||||| |||| ||||||||| || || ||||||||    
T  27663959 tcacatcctttgaagcaacaagcaatatccaaaaagacactctgttgttcttcttc 27664014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 299
Target Start/End: Original strand, 27591727 - 27591821
Alignment:
Q  205 ccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttc 299  Q
    |||||||||| ||||||||| | |||| | |  ||| ||  ||||||||||| |||||||||||| |||| ||||||||| |||| |||||||||    
T  27591727 ccataatgagcatgaagtatctgtttgactttctccaatctacatcctttgatgcaacaagcaatatccaaaaagacactctgctcctcttcttc 27591821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 287
Target Start/End: Complemental strand, 26938554 - 26938423
Alignment:
Q  156 tatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttg 255  Q
    |||||||||||| | | |||||||||| | ||||| | |||||||||| |||||||||| ||||||| ||| ||   | ||  || ||  ||| || |||    
T  26938554 tatgagagatttattaaccaacactccaacatgattttttatgcaatgaccataatgagcatgaagtttatcttcaacctcagccaatctacacccattg 26938455  T
Q  256 aagcaacaagcaatgtccagaaagacactttg 287  Q
    |||||||| | ||| |||||||||||||||||    
T  26938454 aagcaacacgtaatatccagaaagacactttg 26938423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 296
Target Start/End: Original strand, 27676326 - 27676417
Alignment:
Q  205 ccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    |||||||||  ||||||||| | || | | |||||| ||  ||||||||||| |||||||||||| |||| ||||||||| |||| ||||||    
T  27676326 ccataatgatgatgaagtatctgttcgacttcttccaatctacatcctttgatgcaacaagcaatatccaaaaagacactctgctcctcttc 27676417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 28097022 - 28097072
Alignment:
Q  72 tgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 122  Q
    |||||||||||  || | ||||||||||||||| |||||||||||||||||    
T  28097022 tgattcttgtcttacaatttctttacccatgtcttctatcaagtcatgtaa 28097072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 2041 - 2336
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2041 gtgttttctcttaaaacacgaactatatcatcctgacagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 2140  T
Q  101 tgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgca 200  Q
    ||||||||||||||||||||||||||||||||| | |||||||||   |||  | |||||||||||||||| ||||||||||||||||||||||||||||    
T  2141 tgtcctctatcaagtcatgtaacatcacataatcgtcatattcccgtaatttctttatgagagatttttcaaccaacactcctagatgatgtgttatgca 2240  T
Q  201 atggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  2241 atggccataatgagaattaagtatatatttggcatcttcccatttacatcttttgaagcaacaagcaatgtctagaaagacactttgctgctcttc 2336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 168; Significance: 5e-90; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 11 - 299
Target Start/End: Original strand, 266861 - 267140
Alignment:
Q  11 ttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctat 110  Q
    |||||||| ||||||||||||| || || ||||||||||||| ||||||||||||||||  ||||||||| ||||| |||||||||||||||||||||||    
T  266861 ttaaaacatgaactatatcatcttgacaccataacctacttcgttctccaggctctttaggtgattcttggcggaccacttctttacccatgtcctctat 266960  T
Q  111 caagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataa 210  Q
    || |||||||||  |||||| |      |||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  266961 catgtcatgtaatgtcacatgac-----tat----aatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcagtggccataa 267051  T
Q  211 tgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttc 299  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||| |||||||||    
T  267052 tgagaatgaagtatatgtttggcatcttcccattcatatcctttgaagcaacaagcaatgtctaaaaagacactctgctcctcttcttc 267140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 224
Target Start/End: Original strand, 28126200 - 28126400
Alignment:
Q  15 aacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaag 114  Q
    |||| ||||||||||||  || || ||||||||  | | ||||||||||||||||  ||||||||  ||||||| |||||||||| | ||||||||||||    
T  28126200 aacatgaactatatcattgtgacaccataacctgttgcgttctccaggctctttacgtgattctttccggacgatttctttacccgtatcctctatcaag 28126299  T
Q  115 tcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgag 214  Q
    ||||||||  ||||||| ||    ||||   |||     || ||||||||||||||| |||||||||| | ||||||  |||||||||||||||||||||    
T  28126300 tcatgtaatgtcacatattg--agtatt---aat----ctcaatgagagatttttcaaccaacactccaacatgatgctttatgcaatggccataatgag 28126390  T
Q  215 aatgaagtat 224  Q
     |||||||||    
T  28126391 catgaagtat 28126400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 26137559 - 26137441
Alignment:
Q  4 ttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgt 103  Q
    |||||| |||||||| |||||||||| || ||  | || |||||||| | || |||||| |||||   ||||||||||||||| | |||||||||||| |    
T  26137559 ttttcttttaaaacatgaactatatcttcatgaaaccacaacctactgcgttttccaggttctttgggtgattcttgtcggacaatttctttacccatat 26137460  T
Q  104 cctctatcaagtcatgtaa 122  Q
    |||||||||||||||||||    
T  26137459 cctctatcaagtcatgtaa 26137441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 296
Target Start/End: Original strand, 28132156 - 28132298
Alignment:
Q  154 tctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctt 253  Q
    |||||||||||||||||  |||||||||| | ||||||| ||||||||||||||| ||||| ||||||||| | || | |   |  | ||  | | || |    
T  28132156 tctatgagagatttttcgaccaacactccaacatgatgttttatgcaatggccattatgagcatgaagtatctcttcgaccattgtcaatctatacccct 28132255  T
Q  254 tgaagcaacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    ||||||||||||| || ||||||||||||||||||| ||||||    
T  28132256 tgaagcaacaagctatatccagaaagacactttgctcctcttc 28132298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 296
Target Start/End: Complemental strand, 26137412 - 26137273
Alignment:
Q  157 atgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttga 256  Q
    ||||||| ||| ||| |||||||||| | ||||  | ||||||||||| ||||| ||| ||||||||| | || | | |||  | ||| ||| |||||||    
T  26137412 atgagagctttatcaaccaacactccaacatgactttttatgcaatggtcataacgagcatgaagtatcttttggacttctgtcaatttacaccctttga 26137313  T
Q  257 agcaacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    ||||||||||||| |||| ||| |||||||| || |||||    
T  26137312 agcaacaagcaatatccaaaaatacactttgttgttcttc 26137273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 5921996 - 5922098
Alignment:
Q  20 gaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatg 119  Q
    |||||||||| ||  |||| ||||||||||| |  | ||||||||||||   |||||||||||  || | |||||| ||||||||||||||||  |||||    
T  5921996 gaactatatcttcagggcaccataacctactgcgctttccaggctctttcggtgattcttgtctaacaatttcttttcccatgtcctctatcacatcatg 5922095  T
Q  120 taa 122  Q
    |||    
T  5922096 taa 5922098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 28132016 - 28132118
Alignment:
Q  20 gaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatg 119  Q
    ||||||||||||  || || ||||||||||| | ||||||||| || |||   |||||||   |||||| |||||||||  |||| ||||||||||||||    
T  28132016 gaactatatcattgtgacaccataacctactgcgttctccaggttccttacacgattctttatggacgatttctttacctgtgtcttctatcaagtcatg 28132115  T
Q  120 taa 122  Q
    |||    
T  28132116 taa 28132118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 82; Significance: 1e-38; HSPs: 4)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 159 - 296
Target Start/End: Original strand, 3372 - 3509
Alignment:
Q  159 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaag 258  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||| | ||||||||||||     || |||||| ||||||||||||||    
T  3372 gagagatttttcagccaacactactagatgatgtgttatgcgatggccataatgagcacgaagtatatattcaaactcctcccatccacatcctttgaag 3471  T
Q  259 caacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    ||||| |||||||| ||||| |||||||||||||||||    
T  3472 caacaggcaatgtctagaaaaacactttgctgctcttc 3509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 159 - 296
Target Start/End: Original strand, 12335 - 12472
Alignment:
Q  159 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaag 258  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||| | ||||||||||||     || | |||| ||||||||||||||    
T  12335 gagagatttttcagccaacactactagatgatgtgttatgcgatggccataatgagcacgaagtatatattcaaactccttccatccacatcctttgaag 12434  T
Q  259 caacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    ||||| |||||||| ||||| |||||||||||||||||    
T  12435 caacaggcaatgtctagaaaaacactttgctgctcttc 12472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 3205 - 3325
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||||| ||||||||  |||||||||||| |  || ||||| |||||||||||||||||||||||    ||||||||||||||||||||||||||||    
T  3205 gtgttttcttttaaaacattaactatatcatcttcacaccataatctacttctttctccaggctctttgggcgattcttgtcggacgacttctttaccca 3304  T
Q  101 tgtcctctatcaagtcatgta 121  Q
    |||||| ||||||||||||||    
T  3305 tgtcctttatcaagtcatgta 3325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 12168 - 12288
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||||| ||||||||  |||||||||||| |  || ||||| |||||||||||||||||||||||    ||||||||||||||||||||||||||||    
T  12168 gtgttttcttttaaaacattaactatatcatcttcacaccataatctacttctttctccaggctctttgggcgattcttgtcggacgacttctttaccca 12267  T
Q  101 tgtcctctatcaagtcatgta 121  Q
    |||||| ||||||||||||||    
T  12268 tgtcctttatcaagtcatgta 12288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870 (Bit Score: 74; Significance: 6e-34; HSPs: 2)
Name: scaffold1870
Description:

Target: scaffold1870; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 291 - 154
Alignment:
Q  159 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaag 258  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | | ||||||| ||     || | |||| ||||||||||||||    
T  291 gagagatttttcagccaacactcctagatgatgttttatgcaatggccataatgagcacgtagtatatcttcaaactccttccatccacatcctttgaag 192  T
Q  259 caacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    ||||| |||||||| ||||| |||||||||||||||||    
T  191 caacaggcaatgtctagaaaaacactttgctgctcttc 154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 461 - 340
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||||| ||||||||  |||||||||||| || || |||||||||||||||||||| |||||||||   ||||||||||| ||||||||||||||||    
T  461 gtgttttcttttaaaacattaactatatcatcttgacaccataacctacttctttctcctggctctttaggcgattcttgtcgtacgacttctttaccca 362  T
Q  101 tgtcctctatcaagtcatgtaa 122  Q
    |||||||||| |||||||||||    
T  361 tgtcctctataaagtcatgtaa 340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 74; Significance: 6e-34; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 9009 - 8872
Alignment:
Q  159 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaag 258  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | | ||||||| ||     || | |||| ||||||||||||||    
T  9009 gagagatttttcagccaacactcctagatgatgttttatgcaatggccataatgagcacgtagtatatcttcaaactccttccatccacatcctttgaag 8910  T
Q  259 caacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    ||||| |||||||| ||||| |||||||||||||||||    
T  8909 caacaggcaatgtctagaaaaacactttgctgctcttc 8872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 9179 - 9058
Alignment:
Q  1 gtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttaccca 100  Q
    ||||||||| ||||||||  |||||||||||| || || |||||||||||||||||||| |||||||||   ||||||||||| ||||||||||||||||    
T  9179 gtgttttcttttaaaacattaactatatcatcttgacaccataacctacttctttctcctggctctttaggcgattcttgtcgtacgacttctttaccca 9080  T
Q  101 tgtcctctatcaagtcatgtaa 122  Q
    |||||||||| |||||||||||    
T  9079 tgtcctctataaagtcatgtaa 9058  T

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Target: scaffold0003 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 40 - 296
Target Start/End: Complemental strand, 61207 - 60954
Alignment:
Q  40 cataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatggccat 139  Q
    |||||||| ||||||| |||||||||   |  ||||||| ||||||||| |||||||||||||| ||||||||||| ||||||   ||||| |    | |    
T  61207 cataacctgcttctttttccaggctcaaaaggtgattctagtcggacgagttctttacccatgttctctatcaagttatgtaatgacacatgactatcgt 61108  T
Q  140 attcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttc 239  Q
    ||||  |||   |||| |||||| |||||||| | | |||| | | ||||||  |||||||||| |||||||||| ||||||||| | |||| | | |||    
T  61107 attcaaaat---ggtcaatgagacatttttcaactagcacttcaacatgatgatttatgcaatgaccataatgagcatgaagtatttctttgaccttttc 61011  T
Q  240 ccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    ||||| ||| ||||||||||||||||||||||| |||||||||||||||| ||||||    
T  61010 ccatttacaacctttgaagcaacaagcaatgtctagaaagacactttgctcctcttc 60954  T

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Target: chr4 (Bit Score: 71; Significance: 4e-32; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 40 - 296
Target Start/End: Complemental strand, 18075399 - 18075146
Alignment:
Q  40 cataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatggccat 139  Q
    |||||||| ||||||| |||||||||   |  ||||||| ||||||||| |||||||||||||| ||||||||||| ||||||   ||||| |    | |    
T  18075399 cataacctgcttctttttccaggctcaaaaggtgattctagtcggacgagttctttacccatgttctctatcaagttatgtaatgacacatgactatcgt 18075300  T
Q  140 attcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttc 239  Q
    ||||  |||   |||| |||||| |||||||| | | |||| | | ||||||  |||||||||| |||||||||| ||||||||| | |||| | | |||    
T  18075299 attcaaaat---ggtcaatgagacatttttcaactagcacttcaacatgatgatttatgcaatgaccataatgagcatgaagtatttctttgaccttttc 18075203  T
Q  240 ccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    ||||| ||| ||||||||||||||||||||||| |||||||||||||||| ||||||    
T  18075202 ccatttacaacctttgaagcaacaagcaatgtctagaaagacactttgctcctcttc 18075146  T

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Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 18654042 - 18654105
Alignment:
Q  59 caggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 122  Q
    |||||| ||||  ||||||||  ||||||| ||||||||||||| |||||| ||||||||||||    
T  18654042 caggctgtttaggtgattctttccggacgatttctttacccatgacctctagcaagtcatgtaa 18654105  T

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Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 18678122 - 18678185
Alignment:
Q  59 caggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 122  Q
    ||||||||||   ||||||||  ||||||| ||||||||||||| |||||| ||||||||||||    
T  18678122 caggctctttgggtgattctttccggacgatttctttacccatgacctctagcaagtcatgtaa 18678185  T

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Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 18688179 - 18688242
Alignment:
Q  59 caggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 122  Q
    |||||||||||  ||||||||  ||||| | ||||||||||||| |||||| ||||||||||||    
T  18688179 caggctctttaggtgattctttccggacaatttctttacccatgacctctagcaagtcatgtaa 18688242  T

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Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 18697965 - 18698028
Alignment:
Q  59 caggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 122  Q
    ||||||||||   ||||||||  ||||||| ||||||||||||| |||||| ||||||||||||    
T  18697965 caggctctttgggtgattctttccggacgatttctttacccatggcctctagcaagtcatgtaa 18698028  T

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Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 18730060 - 18730123
Alignment:
Q  59 caggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 122  Q
    ||||||||||   ||||||||  ||||||| ||||||||||||| |||||| ||||||||||||    
T  18730060 caggctctttgggtgattctttccggacgatttctttacccatgacctctagcaagtcatgtaa 18730123  T

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Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 18688369 - 18688419
Alignment:
Q  246 acatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    ||||||||||||| |||||||||| |||| |||||||||||| || |||||    
T  18688369 acatcctttgaagaaacaagcaatatccaaaaagacactttgttgttcttc 18688419  T

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Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 18698143 - 18698193
Alignment:
Q  246 acatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    ||||||||||||| |||||||||| |||| |||||||||||| || |||||    
T  18698143 acatcctttgaagaaacaagcaatatccaaaaagacactttgttgttcttc 18698193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 18722828 - 18722878
Alignment:
Q  246 acatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    ||||||||||||| |||||||||| |||| |||||||||||| || |||||    
T  18722828 acatcctttgaagaaacaagcaatatccaaaaagacactttgttgttcttc 18722878  T

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Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 18730247 - 18730297
Alignment:
Q  246 acatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttc 296  Q
    ||||||||||||| |||||||||| |||| |||||||||||| || |||||    
T  18730247 acatcctttgaagaaacaagcaatatccaaaaagacactttgttgttcttc 18730297  T

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Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 17991755 - 17991822
Alignment:
Q  54 ttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgta 121  Q
    ||||||||||||||||  ||||||||| || |||| ||||||||||||||||||||||||||||||||    
T  17991755 ttctccaggctctttaggtgattcttgccgaacgatttctttacccatgtcctctatcaagtcatgta 17991822  T

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Target: chr5 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 16692300 - 16692264
Alignment:
Q  248 atcctttgaagcaacaagcaatgtccagaaagacact 284  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  16692300 atcctttgaagcaacaagcaatgtccaaaaaaacact 16692264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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