View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12680_low_22 (Length: 282)
Name: NF12680_low_22
Description: NF12680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12680_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 19 - 273
Target Start/End: Complemental strand, 30968449 - 30968195
Alignment:
| Q |
19 |
ccttaacccttttatgaacttttatttctacagcttttgccacactgtgctccacattctgtttcctacattcttgaactgttggcattgccaaattgtg |
118 |
Q |
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| T |
30968449 |
ccttaacccttttatgaacttttatttctacagcttttgccacactgtgctccacattctgtttcctacattcttgaactgttggcattgccaaattgtg |
30968350 |
T |
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| Q |
119 |
ttggttgccatatttatcgcgctgaaacccggggaattctttgggatgaagcgggaaaccacataaaaaaggtaaggttcatcatgtaaataaaagtgaa |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30968349 |
ttggttgccatatttatcgcgctgaaacccggggaattctttgggatgaagcgggaaaccacataaaaaaggtaaggttcatcatgtaaataaaagtgaa |
30968250 |
T |
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| Q |
219 |
aattgtcatggcagagtcctgaaagtgagtttataagtggtggcagtcttcatct |
273 |
Q |
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| T |
30968249 |
aattgtcatggcagagtcctgaaagtgggtttataagtggtggcagtcttcatct |
30968195 |
T |
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