View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12680_low_24 (Length: 278)

Name: NF12680_low_24
Description: NF12680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12680_low_24
NF12680_low_24
[»] chr2 (48 HSPs)
chr2 (1-261)||(37981621-37981881)
chr2 (2-179)||(2288461-2288636)
chr2 (1-121)||(29940944-29941064)
chr2 (5-125)||(2085548-2085668)
chr2 (1-125)||(18176430-18176554)
chr2 (2-261)||(7487954-7488213)
chr2 (2-125)||(15284493-15284616)
chr2 (17-261)||(16155425-16155669)
chr2 (2-126)||(21736565-21736689)
chr2 (148-261)||(14920447-14920560)
chr2 (8-121)||(45546937-45547050)
chr2 (3-77)||(2372970-2373044)
chr2 (63-261)||(36598292-36598490)
chr2 (3-116)||(3858156-3858269)
chr2 (152-261)||(10441446-10441555)
chr2 (4-121)||(45485364-45485480)
chr2 (1-121)||(27090634-27090754)
chr2 (2-77)||(9120059-9120134)
chr2 (157-261)||(24935962-24936066)
chr2 (149-255)||(15284357-15284464)
chr2 (2-77)||(16269582-16269657)
chr2 (2-116)||(39698567-39698681)
chr2 (21-127)||(35172598-35172704)
chr2 (66-127)||(16146884-16146945)
chr2 (181-261)||(2085725-2085805)
chr2 (2-46)||(6289539-6289583)
chr2 (149-261)||(21736429-21736541)
chr2 (157-261)||(25684646-25684750)
chr2 (2-77)||(11534835-11534910)
chr2 (2-121)||(20157722-20157841)
chr2 (2-77)||(22552007-22552082)
chr2 (2-77)||(24776246-24776321)
chr2 (27-78)||(26601443-26601494)
chr2 (18-77)||(32125157-32125216)
chr2 (3-78)||(44765667-44765742)
chr2 (3-77)||(14198820-14198894)
chr2 (2-48)||(14920619-14920665)
chr2 (27-121)||(24193574-24193668)
chr2 (24-77)||(378892-378945)
chr2 (28-77)||(3463588-3463637)
chr2 (149-194)||(35172529-35172574)
chr2 (2-78)||(1789333-1789409)
chr2 (182-234)||(17330452-17330504)
chr2 (2-78)||(19144915-19144991)
chr2 (5-77)||(26788678-26788750)
chr2 (26-78)||(28740526-28740578)
chr2 (5-77)||(28844449-28844521)
chr2 (5-77)||(43078569-43078641)
[»] chr4 (51 HSPs)
chr4 (13-261)||(53594097-53594346)
chr4 (2-261)||(28100406-28100667)
chr4 (63-260)||(37370712-37370910)
chr4 (2-254)||(41761979-41762231)
chr4 (2-261)||(38230772-38231032)
chr4 (5-261)||(28846926-28847183)
chr4 (2-121)||(8583970-8584089)
chr4 (2-116)||(44646721-44646835)
chr4 (4-125)||(53271911-53272032)
chr4 (2-223)||(16018903-16019123)
chr4 (2-121)||(44929877-44929996)
chr4 (64-127)||(20538993-20539057)
chr4 (2-125)||(16653254-16653377)
chr4 (2-121)||(8880444-8880563)
chr4 (2-121)||(25935786-25935906)
chr4 (2-125)||(27529085-27529202)
chr4 (2-74)||(42218416-42218488)
chr4 (5-121)||(52109409-52109525)
chr4 (2-116)||(56397443-56397557)
chr4 (81-118)||(1848495-1848532)
chr4 (2-74)||(33450149-33450221)
chr4 (2-46)||(35261615-35261659)
chr4 (2-121)||(3435922-3436036)
chr4 (2-116)||(37915674-37915788)
chr4 (149-195)||(42315047-42315093)
chr4 (28-116)||(37828605-37828693)
chr4 (1-77)||(7250015-7250091)
chr4 (5-77)||(23987148-23987220)
chr4 (1-77)||(24131214-24131290)
chr4 (1-77)||(28541586-28541662)
chr4 (149-261)||(56397591-56397703)
chr4 (2-121)||(7820096-7820215)
chr4 (2-77)||(39479599-39479674)
chr4 (2-121)||(45332666-45332785)
chr4 (182-261)||(53272090-53272169)
chr4 (2-77)||(54509714-54509789)
chr4 (3-77)||(47685145-47685219)
chr4 (29-130)||(543888-543989)
chr4 (24-77)||(32951078-32951131)
chr4 (24-77)||(34228824-34228877)
chr4 (5-77)||(5441296-5441368)
chr4 (5-77)||(20021236-20021308)
chr4 (5-77)||(27767948-27768020)
chr4 (5-77)||(30967541-30967613)
chr4 (64-116)||(36094279-36094331)
chr4 (2-74)||(40537390-40537462)
chr4 (2-77)||(41881325-41881401)
chr4 (65-125)||(42314962-42315022)
chr4 (26-78)||(49835054-49835106)
chr4 (5-77)||(54341036-54341108)
chr4 (1-77)||(55302731-55302807)
[»] chr5 (26 HSPs)
chr5 (2-261)||(28594265-28594527)
chr5 (1-261)||(27786209-27786463)
chr5 (3-259)||(26795339-26795595)
chr5 (3-219)||(26806442-26806659)
chr5 (14-118)||(26795601-26795705)
chr5 (2-261)||(9689169-9689420)
chr5 (14-118)||(26806665-26806769)
chr5 (5-261)||(2276029-2276286)
chr5 (2-130)||(39753435-39753563)
chr5 (2-121)||(40410590-40410709)
chr5 (2-127)||(3604412-3604537)
chr5 (15-261)||(378245-378493)
chr5 (4-121)||(10571113-10571230)
chr5 (1-77)||(7857024-7857100)
chr5 (5-121)||(17518431-17518547)
chr5 (157-261)||(36682051-36682155)
chr5 (4-77)||(5273202-5273276)
chr5 (149-261)||(3604277-3604389)
chr5 (5-116)||(14000307-14000418)
chr5 (1-77)||(33656284-33656360)
chr5 (2-77)||(6828801-6828876)
chr5 (2-77)||(7016938-7017013)
chr5 (2-77)||(21146957-21147032)
chr5 (24-78)||(16894100-16894153)
chr5 (5-77)||(4550498-4550570)
chr5 (81-125)||(40460538-40460582)
[»] chr3 (50 HSPs)
chr3 (3-259)||(10215868-10216123)
chr3 (3-259)||(10225497-10225752)
chr3 (2-261)||(45926769-45927033)
chr3 (3-259)||(10104720-10104976)
chr3 (22-261)||(46749271-46749510)
chr3 (14-118)||(10104982-10105086)
chr3 (14-118)||(10225758-10225862)
chr3 (14-118)||(10216129-10216233)
chr3 (1-125)||(45215362-45215486)
chr3 (2-121)||(19552113-19552232)
chr3 (2-121)||(50900412-50900531)
chr3 (2-118)||(38682426-38682541)
chr3 (2-121)||(24150797-24150916)
chr3 (2-121)||(26555814-26555933)
chr3 (2-121)||(36054972-36055091)
chr3 (2-121)||(30588839-30588958)
chr3 (2-118)||(52024167-52024284)
chr3 (2-121)||(26005948-26006067)
chr3 (3-118)||(35730933-35731048)
chr3 (1-70)||(10067700-10067769)
chr3 (4-121)||(26293532-26293649)
chr3 (64-125)||(44042006-44042067)
chr3 (5-261)||(44701546-44701802)
chr3 (1-121)||(25713404-25713524)
chr3 (2-77)||(13662548-13662623)
chr3 (2-121)||(38629765-38629884)
chr3 (66-115)||(10055755-10055804)
chr3 (24-77)||(29449102-29449155)
chr3 (3-130)||(12103358-12103485)
chr3 (2-77)||(6035294-6035369)
chr3 (1-116)||(34292474-34292589)
chr3 (2-127)||(23697005-23697130)
chr3 (2-127)||(23715460-23715585)
chr3 (2-127)||(23733916-23734041)
chr3 (2-127)||(23752374-23752499)
chr3 (24-77)||(35337646-35337699)
chr3 (5-77)||(10660427-10660499)
chr3 (149-261)||(23697155-23697267)
chr3 (2-77)||(996327-996402)
chr3 (2-77)||(3206438-3206513)
chr3 (7-118)||(6784069-6784180)
chr3 (2-77)||(12734082-12734157)
chr3 (2-77)||(53184082-53184157)
chr3 (149-195)||(85899-85945)
chr3 (24-77)||(19253738-19253791)
chr3 (24-77)||(37820719-37820772)
chr3 (24-77)||(44762279-44762332)
chr3 (5-77)||(36674372-36674444)
chr3 (145-193)||(43601766-43601814)
chr3 (5-57)||(50901203-50901255)
[»] chr1 (39 HSPs)
chr1 (1-259)||(27198270-27198529)
chr1 (2-261)||(42657714-42657974)
chr1 (2-261)||(48203348-48203608)
chr1 (2-261)||(19007404-19007663)
chr1 (2-261)||(48194590-48194850)
chr1 (2-115)||(19893451-19893564)
chr1 (3-130)||(14555267-14555394)
chr1 (2-121)||(26882791-26882910)
chr1 (4-103)||(51826819-51826918)
chr1 (2-195)||(43553536-43553729)
chr1 (5-125)||(52179652-52179772)
chr1 (2-121)||(45318460-45318579)
chr1 (2-130)||(14229007-14229136)
chr1 (5-116)||(49230772-49230883)
chr1 (1-121)||(52705392-52705512)
chr1 (5-118)||(39757984-39758096)
chr1 (5-118)||(39763338-39763450)
chr1 (1-121)||(9191130-9191250)
chr1 (149-261)||(39758120-39758231)
chr1 (149-261)||(39763474-39763585)
chr1 (2-121)||(10896800-10896919)
chr1 (2-121)||(36402247-36402366)
chr1 (1-78)||(9831298-9831375)
chr1 (152-261)||(14555135-14555244)
chr1 (3-116)||(28039377-28039490)
chr1 (2-47)||(34772311-34772356)
chr1 (5-77)||(25612043-25612115)
chr1 (1-77)||(35679370-35679446)
chr1 (2-77)||(953702-953777)
chr1 (2-77)||(28824614-28824689)
chr1 (67-125)||(4288998-4289056)
chr1 (5-74)||(45272473-45272542)
chr1 (24-77)||(50192793-50192846)
chr1 (217-261)||(4289149-4289193)
chr1 (5-77)||(6312460-6312532)
chr1 (5-77)||(9322742-9322814)
chr1 (5-77)||(15835295-15835367)
chr1 (2-78)||(33025395-33025471)
chr1 (2-78)||(45760251-45760327)
[»] scaffold0287 (1 HSPs)
scaffold0287 (2-261)||(11621-11872)
[»] chr7 (49 HSPs)
chr7 (2-261)||(3634213-3634464)
chr7 (2-261)||(46037174-46037434)
chr7 (7-192)||(9598958-9599145)
chr7 (7-192)||(9826529-9826716)
chr7 (2-121)||(151858-151977)
chr7 (2-121)||(27418607-27418726)
chr7 (18-121)||(35090071-35090174)
chr7 (54-125)||(37042524-37042595)
chr7 (2-121)||(47915022-47915141)
chr7 (62-116)||(41060045-41060099)
chr7 (2-127)||(12253350-12253475)
chr7 (3-116)||(26201532-26201644)
chr7 (5-118)||(34115441-34115554)
chr7 (1-77)||(31494238-31494314)
chr7 (5-77)||(39783986-39784058)
chr7 (6-121)||(30110807-30110922)
chr7 (1-118)||(47031244-47031361)
chr7 (2-106)||(8116716-8116820)
chr7 (157-261)||(36355308-36355412)
chr7 (157-261)||(42678017-42678121)
chr7 (17-125)||(42678155-42678263)
chr7 (9-121)||(43057646-43057758)
chr7 (2-77)||(8078286-8078361)
chr7 (2-77)||(30440687-30440762)
chr7 (140-190)||(37042458-37042508)
chr7 (2-116)||(37649666-37649778)
chr7 (24-77)||(34695144-34695197)
chr7 (5-77)||(509585-509657)
chr7 (157-261)||(24939475-24939578)
chr7 (157-261)||(34115297-34115401)
chr7 (2-118)||(40097094-40097210)
chr7 (3-102)||(5572538-5572637)
chr7 (1-76)||(24939659-24939734)
chr7 (2-77)||(44343637-44343712)
chr7 (149-195)||(12253281-12253327)
chr7 (66-116)||(46202519-46202569)
chr7 (24-77)||(10676619-10676672)
chr7 (24-77)||(18914976-18915029)
chr7 (28-77)||(31638792-31638841)
chr7 (5-77)||(7993029-7993101)
chr7 (28-116)||(15913381-15913469)
chr7 (89-125)||(21067021-21067057)
chr7 (5-77)||(28342234-28342306)
chr7 (149-261)||(33474669-33474781)
chr7 (5-77)||(37327814-37327886)
chr7 (5-116)||(39027984-39028095)
chr7 (5-77)||(41827201-41827273)
chr7 (2-34)||(43057840-43057872)
chr7 (29-77)||(46405672-46405720)
[»] chr8 (38 HSPs)
chr8 (63-261)||(24317972-24318176)
chr8 (2-127)||(17790436-17790561)
chr8 (1-121)||(2112790-2112910)
chr8 (2-125)||(14061546-14061669)
chr8 (2-118)||(1605981-1606097)
chr8 (2-261)||(42366050-42366302)
chr8 (2-121)||(42274972-42275091)
chr8 (6-121)||(43605329-43605444)
chr8 (1-121)||(28619842-28619962)
chr8 (2-121)||(10802736-10802855)
chr8 (2-121)||(29260241-29260360)
chr8 (2-121)||(35142042-35142161)
chr8 (2-121)||(40265246-40265365)
chr8 (2-261)||(43488906-43489166)
chr8 (6-77)||(7148050-7148121)
chr8 (1-113)||(24296625-24296737)
chr8 (2-121)||(4655047-4655166)
chr8 (2-77)||(9457543-9457618)
chr8 (1-77)||(42937249-42937325)
chr8 (3-125)||(10127528-10127649)
chr8 (1-77)||(7507140-7507216)
chr8 (2-77)||(41386879-41386955)
chr8 (2-77)||(23115409-23115484)
chr8 (2-77)||(24214832-24214907)
chr8 (2-77)||(42735518-42735593)
chr8 (27-77)||(14723961-14724011)
chr8 (200-261)||(24296476-24296537)
chr8 (24-77)||(26373717-26373770)
chr8 (4-77)||(41478989-41479062)
chr8 (5-77)||(43166889-43166961)
chr8 (2-46)||(9209036-9209080)
chr8 (5-77)||(14782376-14782448)
chr8 (2-46)||(30382714-30382758)
chr8 (5-116)||(32497376-32497487)
chr8 (28-116)||(38806849-38806937)
chr8 (2-46)||(40013510-40013554)
chr8 (1-77)||(42938358-42938434)
chr8 (5-77)||(44726051-44726123)
[»] chr6 (21 HSPs)
chr6 (2-261)||(7100164-7100424)
chr6 (2-261)||(8794206-8794466)
chr6 (18-261)||(708931-709174)
chr6 (2-130)||(5957126-5957254)
chr6 (2-103)||(31609675-31609776)
chr6 (2-77)||(29834294-29834369)
chr6 (2-77)||(29865728-29865803)
chr6 (2-119)||(3110252-3110369)
chr6 (81-125)||(4653377-4653421)
chr6 (139-187)||(11007622-11007670)
chr6 (2-121)||(6476678-6476797)
chr6 (71-116)||(10009608-10009653)
chr6 (6-70)||(11007698-11007762)
chr6 (5-77)||(14262674-14262746)
chr6 (157-261)||(35164960-35165064)
chr6 (2-77)||(2300979-2301054)
chr6 (2-77)||(30877852-30877927)
chr6 (143-261)||(10009464-10009582)
chr6 (149-261)||(5957277-5957389)
chr6 (5-77)||(31895588-31895660)
chr6 (5-77)||(34773301-34773373)
[»] scaffold0016 (1 HSPs)
scaffold0016 (2-121)||(81747-81866)
[»] scaffold0472 (1 HSPs)
scaffold0472 (2-261)||(1709-1969)
[»] scaffold0237 (1 HSPs)
scaffold0237 (2-77)||(21422-21497)
[»] scaffold0042 (1 HSPs)
scaffold0042 (5-77)||(58276-58348)
[»] scaffold1504 (1 HSPs)
scaffold1504 (5-77)||(756-828)
[»] scaffold0543 (1 HSPs)
scaffold0543 (5-77)||(10453-10525)
[»] scaffold0153 (1 HSPs)
scaffold0153 (2-46)||(34842-34886)


Alignment Details
Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 37981621 - 37981881
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaa 100  Q
    |||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  37981621 agggtgtattagattgagatttcaagagattttagaagattttttgattatagaaaagtcatgtggtattcaatcaaaacttttataaaatataaataaa 37981720  T
Q  101 tcttgtggtattcaattaggacaattatgannnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttag 200  Q
    | |||||||||||||||| |||||| ||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37981721 ttttgtggtattcaattaagacaatcatgattttttttcaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttag 37981820  T
Q  201 atattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
     ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  37981821 gtattcaaaaattgatagattttgatggattcttttatggaatagaatttgtgagactttt 37981881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 2288461 - 2288636
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||  ||| ||  |||||||||||||||   ||||||||||| |||| ||||    
T  2288461 gggtgtattgaattgagaattcaagggattttaaaagacttttttattata--aaagtctagtggtattcaatcaagacttttataaaatgtaaacaaat 2288558  T
Q  102 cttgtggtattcaattaggacaattatgannnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctca 179  Q
    ||||||||||||||||| |||||| ||||         || ||||  ||||||||||||||||||||| |||||||||    
T  2288559 cttgtggtattcaattaagacaatcatgacttttttttaaggcaacaaaatccgttggtattcaattaagatttctca 2288636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 29940944 - 29941064
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaa 100  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||| || || |||| || ||||||||||||||||  ||||||   ||| ||||  |     
T  29940944 agggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaaggaatgtaaaacat 29941043  T
Q  101 tcttgtggtattcaattagga 121  Q
    |||||||||||||||||||||    
T  29941044 tcttgtggtattcaattagga 29941064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 2085548 - 2085668
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatctt 104  Q
    ||||||| |||||||||||| | ||||||| |||||||||| |  ||| |||| ||||  ||||||||||||||  ||||||| ||||| ||||||||||    
T  2085548 tgtattgaattgagatttcatgagattttaaaagactttttaaaaataaaaaagtcatcaggtattcaatcaaaaattttatataatatgaataaatctt 2085647  T
Q  105 gtggtattcaattaggacaat 125  Q
    ||| |||||||||| ||||||    
T  2085648 gtgatattcaattaagacaat 2085668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 18176554 - 18176430
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaa 100  Q
    ||||||||||| ||| |||||| ||||||||||| |||| ||||| || ||| ||||||| ||||||||||||||||   |||||||||| |||||||||    
T  18176554 agggtgtattgaattaagatttgaagggattttaaaagattttttaataataaaaaaatcttgtggtattcaatcaagacttttataaaacataaataaa 18176455  T
Q  101 tcttgtggtattcaattaggacaat 125  Q
    |||  ||||||| ||| | ||||||    
T  18176454 tctcatggtattgaatcaagacaat 18176430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 7488213 - 7487954
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| |||||||||||||   ||||||  |||||||||||| | |  |||||| ||||||||| ||||||   |||||| |||| |||||||||    
T  7488213 gggtgtattgaattgagatttcaaataattttaatagacttttttatgaaaagaaaatcttgtggtattgaatcaagacttttatgaaatctaaataaat 7488114  T
Q  102 cttgtggtattcaattaggacaattatgannnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttaga 201  Q
    ||||||||||||||| | |||||||| ||         ||  ||   |||| |||||||||||||||| ||||||| | |||||||||||||||    |     
T  7488113 cttgtggtattcaatcaagacaattaagacttttttttaagacatcaaaattcgttggtattcaattaagatttctaagaacttataaaatgtctcgtgg 7488014  T
Q  202 tattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
    |||| |||| | ||  |||||| |||||||| ||| || ||| |||| ||||||||||||    
T  7488013 tattgaaaattagacggattttaatggattcatttgtgtaatggattgtgtgagactttt 7487954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 15284616 - 15284493
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| ||||||| |||||||||||||| ||   |||||||| ||| |||| ||  ||||||||||| |||   ||||||||||| |||| ||||    
T  15284616 gggtgtattgaattgagaattcaagggattttaaaaagattttttataataaaaaagtctagtggtattcaaccaagacttttataaaatgtaaacaaat 15284517  T
Q  102 cttgtggtattcaattaggacaat 125  Q
    ||||||||||||||||| ||||||    
T  15284516 cttgtggtattcaattaagacaat 15284493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 261
Target Start/End: Original strand, 16155425 - 16155669
Alignment:
Q  17 agatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgtggtattcaat 116  Q
    |||| |||| ||||||||  ||||||| |||| |||  | | || |||||||||||||||||  ||||||||||| || |||||| ||||||||||||||    
T  16155425 agatatcaaaggattttaatagactttattatgataagatagtcgtgtggtattcaatcaaaacttttataaaatttatataaattttgtggtattcaat 16155524  T
Q  117 taggacaattatgannnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgat 216  Q
    || |||||||| ||        ||| |||| |||||||||||| ||||||||  ||||||| | || || ||||||||   | | |||| || | |  ||    
T  16155525 taagacaattaagactttttttcaaagcaacgaaatccgttggcattcaattgagatttctaagaaattttaaaatgtttcttggtattgaatattaaat 16155624  T
Q  217 agattttgatggattcttttatggaatagattttgtgagactttt 261  Q
     |||||| ||| |||| |||||||||| |||| ||||||||||||    
T  16155625 ggattttaatgaattcatttatggaattgattgtgtgagactttt 16155669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 21736689 - 21736565
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| ||||||||||||| ||||||||  |||||||||||| | |  |||||| || |||||| ||||||   |||||| |||| |||||||||    
T  21736689 gggtgtattgaattgagatttcaaaggattttaatagacttttttatgaaaagaaaatcttgaggtattgaatcaatacttttatgaaatctaaataaat 21736590  T
Q  102 cttgtggtattcaattaggacaatt 126  Q
    ||||| ||||||||| | |||||||    
T  21736589 cttgttgtattcaatcaagacaatt 21736565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 14920560 - 14920447
Alignment:
Q  148 gaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagat 247  Q
    |||||||||||||||||||||  |||||||   |||||||||||||||  | | |||| |||| | || ||||||| |||||||| ||| ||||||||||    
T  14920560 gaaatccgttggtattcaattgagatttctaggaacttataaaatgtctcttggtattgaaaattagagagattttaatggattcatttgtggaatagat 14920461  T
Q  248 tttgtgagactttt 261  Q
    | ||||||||||||    
T  14920460 tgtgtgagactttt 14920447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 45546937 - 45547050
Alignment:
Q  8 attggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgtg 107  Q
    |||||||||||||||||| | |||||| ||||||||||| || || |||| || ||||||||||||||||  ||||||   ||| ||||  | |||||||    
T  45546937 attggattgagatttcaaagaattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaaggaatgtaaaacattcttgtg 45547036  T
Q  108 gtattcaattagga 121  Q
    ||||||||||||||    
T  45547037 gtattcaattagga 45547050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 2372970 - 2373044
Alignment:
Q  3 ggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||| |||| |||||| | |||||||| ||||||||||| ||||||||||||| || |||||||||||||    
T  2372970 ggtgtattgaattgggatttcgaaggattttaaaagacttttttgttatagaaaaatcttgaggtattcaatcaa 2373044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 261
Target Start/End: Complemental strand, 36598490 - 36598292
Alignment:
Q  63 gtggtattcaatcaaactttttataaaatataaataaatcttgtggtattcaattaggacaattatgannnnnnnncaatgcaatgaaatccgttggtat 162  Q
    |||||||| ||||||   ||||||||||| ||||||||| |||||||||||||| | || ||| | ||         ||| ||| |||||||||||||||    
T  36598490 gtggtatttaatcaagacttttataaaatttaaataaatattgtggtattcaatcaagataatcaagactttttttaaatacaacgaaatccgttggtat 36598391  T
Q  163 tcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
    ||||||| |||||||   |||||||||||||||  | | |||| |||| | || ||||||| ||| |||| | | || |||||||| ||||||||||||    
T  36598390 tcaattaagatttctaggaacttataaaatgtctcttggtattgaaaattagagagattttaatgaattcatctgtgaaatagattgtgtgagactttt 36598292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 3858269 - 3858156
Alignment:
Q  3 ggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatc 102  Q
    ||||||||| ||| |||||| ||||||||||| |||||||||| || ||| |||| |  | ||||||||||||||   ||||||| ||||||||||||||    
T  3858269 ggtgtattgaattaagattttaagggattttaaaagactttttaatgataaaaaacttttttggtattcaatcaagacttttatagaatataaataaatc 3858170  T
Q  103 ttgtggtattcaat 116  Q
    |  || ||||||||    
T  3858169 tcatgatattcaat 3858156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 10441555 - 10441446
Alignment:
Q  152 tccgttggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagattttg 251  Q
    |||||||||||||||||| |||||||||  | ||||||| ||||  | | ||||||||| |  ||||||||||||||||||||  ||||| | |||||||    
T  10441555 tccgttggtattcaattaagatttctcatgatttataaattgtctgttggtattcaaaagtctatagattttgatggattcttggatggagtggattttg 10441456  T
Q  252 tgagactttt 261  Q
     |||||||||    
T  10441455 cgagactttt 10441446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 45485364 - 45485480
Alignment:
Q  4 gtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatct 103  Q
    |||||||||||| ||||||||||  |||||| || ||||||||||| || ||||||| ||| ||||||||||||  ||||||   ||| ||||  | |||    
T  45485364 gtgtattggattcagatttcaagatattttaaaatacttttttattttataaaaatcttgt-gtattcaatcaagatttttaaggaatgtaaaacattct 45485462  T
Q  104 tgtggtattcaattagga 121  Q
    ||||||||||||||||||    
T  45485463 tgtggtattcaattagga 45485480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 27090634 - 27090754
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaa 100  Q
    |||||||||||||||| |||||| |  ||||||| |||| |||||  ||||||||||||| ||  ||||||||||||  |||| | | | || ||||||     
T  27090634 agggtgtattggattgggatttccaaagattttaaaagattttttggttatagaaaaatcttgaagtattcaatcaagattttaaaagattagaaataat 27090733  T
Q  101 tcttgtggtattcaattagga 121  Q
    ||| |||||||||||||||||    
T  27090734 tctggtggtattcaattagga 27090754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 9120059 - 9120134
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||   ||||  ||||||||||| ||||||||||||| ||  ||||||||||||||||||||||||    
T  9120059 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcatgtggtattcaatcaa 9120134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 261
Target Start/End: Complemental strand, 24936066 - 24935962
Alignment:
Q  157 tggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagattttgtgaga 256  Q
    ||||||| ||| | ||||| || ||||||| ||| | ||||| | |||||||||||  ||||||||| |||||||| || ||  ||||||||||||||||    
T  24936066 tggtattaaatcaagatttttctcaacttaaaaattatcctttgttattcaaaaatatatagattttaatggattccttaatataatagattttgtgaga 24935967  T
Q  257 ctttt 261  Q
    |||||    
T  24935966 ctttt 24935962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 255
Target Start/End: Complemental strand, 15284464 - 15284357
Alignment:
Q  149 aaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagatatt-caaaaattgatagattttgatggattcttttatggaatagat 247  Q
    ||||||||||||||||||||| |||||||||  |||||| || ||||  | | |||| ||||| || ||||||||| |||||||||||| |  ||| |||    
T  15284464 aaatccgttggtattcaattaagatttctcatgacttatgaattgtctattggtattacaaaagtttatagattttaatggattcttttgtacaatggat 15284365  T
Q  248 tttgtgag 255  Q
    ||||||||    
T  15284364 tttgtgag 15284357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 16269582 - 16269657
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||   ||||  ||||||||||| ||||||||||||||||  |||| || ||||||||||||||||    
T  16269582 gggtgtattggatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaa 16269657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 39698681 - 39698567
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa-actttttataaaatataaataaa 100  Q
    ||||||||| ||||  ||||||||| ||||||| || ||||||| | |||| || |||| |||||||||||||||| || |||| || ||||||||  ||    
T  39698681 gggtgtattcgattaggatttcaagagattttaaaaaactttttaactataaaacaatcttgtggtattcaatcaagacatttt-tagaatataaaagaa 39698583  T
Q  101 tcttgtggtattcaat 116  Q
    ||||| ||||||||||    
T  39698582 tcttgaggtattcaat 39698567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 35172704 - 35172598
Alignment:
Q  21 ttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgtggtattcaattagg 120  Q
    ||||| ||||||||  |||||||||||| | |  |||||| || |||||| ||||||   ||||||  ||| |||||||||||||||||||||||| | |    
T  35172704 ttcaaaggattttaatagacttttttatgaaaagaaaatcttgaggtattgaatcaagacttttatggaatctaaataaatcttgtggtattcaatcaag 35172605  T
Q  121 acaatta 127  Q
    |||||||    
T  35172604 acaatta 35172598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 16146884 - 16146945
Alignment:
Q  66 gtattcaatcaaactttttataaaatataaataaatcttgtggtattcaattaggacaatta 127  Q
    ||||||||||||   ||||||||||| || |||||| |||||||||||||||| ||||||||    
T  16146884 gtattcaatcaagacttttataaaatttatataaattttgtggtattcaattaagacaatta 16146945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 2085725 - 2085805
Alignment:
Q  181 aacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
    |||||||||||||||  | ||||||||||| |   |||||||| || |||| ||||| ||||| |||||||||||||||||    
T  2085725 aacttataaaatgtctcttgatattcaaaagtatgtagattttaatagattattttacggaatggattttgtgagactttt 2085805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 6289583 - 6289539
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagactttttt 46  Q
    |||||||||||||||||||||||| |||||||| || ||||||||    
T  6289583 gggtgtattggattgagatttcaaaggattttaaaaaactttttt 6289539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 261
Target Start/End: Complemental strand, 21736541 - 21736429
Alignment:
Q  149 aaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagatt 248  Q
    ||||||||||||||||||||| ||||||| | || ||||||||||||    | |||| |||| | ||  |||||| |||||||| ||| || ||| ||||    
T  21736541 aaatccgttggtattcaattaagatttctaagaatttataaaatgtctcgtggtattgaaaattagacggattttaatggattcatttgtgtaatggatt 21736442  T
Q  249 ttgtgagactttt 261  Q
     ||||||||||||    
T  21736441 gtgtgagactttt 21736429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 261
Target Start/End: Complemental strand, 25684750 - 25684646
Alignment:
Q  157 tggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagattttgtgaga 256  Q
    ||||||| ||| | ||||| || ||||||| ||| | ||||| | |||||||||||  ||||||||| ||| |||| || ||  ||||||||||||||||    
T  25684750 tggtattaaatcaagatttttctcaacttaaaaattatcctttgttattcaaaaatatatagattttaatgaattccttaatataatagattttgtgaga 25684651  T
Q  257 ctttt 261  Q
    |||||    
T  25684650 ctttt 25684646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 11534835 - 11534910
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||  ||||||||||||| |||||||| ||||||||||| || || |||| || |  |||||||||||||    
T  11534835 gggtgtattcaattgagatttcaaaggattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaa 11534910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 20157841 - 20157722
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||  ||||||||||||| |||||||| ||||||||||| || || | || || |  |||||||||||||   |||||   ||| ||||  | |    
T  20157841 gggtgtattcaattgagatttcaaaggattttaaaagacttttttgttttaaagaagtctttaggtattcaatcaagacttttaaggaatctaaaacatt 20157742  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||||||||||||||||||    
T  20157741 cttgtggtattcaattagga 20157722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 22552082 - 22552007
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||   ||||  ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  22552082 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 22552007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 24776246 - 24776321
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||   ||||  ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  24776246 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 24776321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 26601494 - 26601443
Alignment:
Q  27 ggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaa 78  Q
    |||||||| ||||||||||||||||  |||| || |||||||||||||||||    
T  26601494 ggattttaaaagacttttttattattaaaaagtcttgtggtattcaatcaaa 26601443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 32125157 - 32125216
Alignment:
Q  18 gatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||| ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  32125157 gattttaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaa 32125216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 44765667 - 44765742
Alignment:
Q  3 ggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaa 78  Q
    ||||||||||||   ||||  ||||||||||| ||||||||||||| ||  |||| || |||||||||||||||||    
T  44765667 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaa 44765742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 14198894 - 14198820
Alignment:
Q  3 ggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||||   ||||  ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  14198894 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 14198820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 14920665 - 14920619
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttat 48  Q
    ||||||||||||||| ||||| || |||||||| |||||||||||||    
T  14920665 gggtgtattggattgtgattttaaaggattttaaaagacttttttat 14920619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 24193574 - 24193668
Alignment:
Q  27 ggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgtggtattcaattagga 121  Q
    |||||||| ||||||||||| || || |||| || || |||||||||||||  ||||||   ||||||||  | | |||||||||||||||||||    
T  24193574 ggattttaaaagacttttttgttttaaaaaagtcttggggtattcaatcaagatttttaaggaatataaaacatttttgtggtattcaattagga 24193668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 378892 - 378945
Alignment:
Q  24 aagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  378892 aagggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 378945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 3463588 - 3463637
Alignment:
Q  28 gattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||| |||||||||| |||||  ||||||| ||||||||||||||||    
T  3463588 gattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaa 3463637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 35172574 - 35172529
Alignment:
Q  149 aaatccgttggtattcaattaggatttctcacaacttataaaatgt 194  Q
    ||||||||||||||||||||| ||||| | | ||||||||||||||    
T  35172574 aaatccgttggtattcaattaagatttataagaacttataaaatgt 35172529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 1789333 - 1789409
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaa 78  Q
    |||||||||||||   ||||  ||| ||||||| |||| |||||||| ||| |||| || |||||||||||||||||    
T  1789333 gggtgtattggatcatgattctaagagattttaaaagatttttttatcataaaaaagtcttgtggtattcaatcaaa 1789409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 17330504 - 17330452
Alignment:
Q  182 acttataaaatgtccttagatattcaaaaattgatagattttgatggattctt 234  Q
    |||||||||||||| || | ||||||||| |  ||||||||||||||||||||    
T  17330504 acttataaaatgtcttttggtattcaaaagtctatagattttgatggattctt 17330452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 19144915 - 19144991
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaa 78  Q
    |||||||||||| |  ||||  ||||||||||| || | |||||||| ||| |||| || |||||||||||||||||    
T  19144915 gggtgtattggaatatgattctaagggattttaaaatatttttttatcataaaaaagtcttgtggtattcaatcaaa 19144991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 26788678 - 26788750
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  26788678 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 26788750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 28740578 - 28740526
Alignment:
Q  26 gggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaa 78  Q
    ||||||||| |||||||||| |||||  |||| || |||||||||||||||||    
T  28740578 gggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaa 28740526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 28844449 - 28844521
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  28844449 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 28844521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 43078569 - 43078641
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  43078569 tgtattggattaggattctatgggattttaaaagactttttgattatgaaaaagtcttgtggtattcaatcaa 43078641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 6e-77; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 13 - 261
Target Start/End: Original strand, 53594097 - 53594346
Alignment:
Q  13 attgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgtggtatt 112  Q
    ||||||||||||| | |||||| |||||||||||||||||||||| || ||||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  53594097 attgagatttcaatgaattttaaaagacttttttattatagaaaagtcttgtggcattcaatcaaaaattttataaaatataaataaatcttgtggtatt 53594196  T
Q  113 caattaggacaattatgannnnnnnn-caatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaa 211  Q
    ||||||  |||||  |||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||| |||||    
T  53594197 caattaaaacaatcgtgatttttttttcaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtctttcggtattaaaaaa 53594296  T
Q  212 ttgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  53594297 ttgatagattttgatggatttttttatggaatggattttgtgagactttt 53594346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 28100667 - 28100406
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagactttttt-attatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaa 100  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||||| |||||| |||| || ||||||||||||||||   ||||||||||||||||||||    
T  28100667 gggtgtattggattgggatttcaaggggttttaaaagactttttttattataaaaaagtcttgtggtattcaatcaagacttttataaaatataaataaa 28100568  T
Q  101 tcttgtggtattcaattaggacaattatgannnnnnnn-caatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtcctta 199  Q
    |||| ||||||||||| | |||||| | ||         ||||| || ||||||||||| |||||||||| ||||||||||||||||||||||||| ||     
T  28100567 tcttatggtattcaatcaagacaatcaagactttttttacaatgtaacgaaatccgttgatattcaattaagatttctcacaacttataaaatgtctttt 28100468  T
Q  200 gatattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
      |||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  28100467 agtattcaaaaattaatagattttgatggattcttttatggaatggattttgagagactttt 28100406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 63 - 260
Target Start/End: Complemental strand, 37370910 - 37370712
Alignment:
Q  63 gtggtattcaatcaaactttttataaaatataaataaatcttgtggtattcaattaggacaattatgannnnnnnncaa-tgcaatgaaatccgttggta 161  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||| ||||         || | ||| |||||  |||| ||    
T  37370910 gtggtattcaatcaaaacttttataaaatataaataaatcttgtggtattcaattaagacaatcatgactttttttaaaatacaacgaaatttgttgcta 37370811  T
Q  162 ttcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagacttt 260  Q
    |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  37370810 ttcaattaagatttctcacaacttataaaatgtccttcggtattcaaaaattgatagattttaatggattcttttatggaatggattttgtgagacttt 37370712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 254
Target Start/End: Original strand, 41761979 - 41762231
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa-actttttataaaatataaataaa 100  Q
    ||||||||||||||||||||| || |||||||| |||||||| | |||||| |||| || ||||||||| |||||| ||||||||||||||||||||||     
T  41761979 gggtgtattggattgagattttaaaggattttaaaagactttgtgattataaaaaagtcttgtggtattgaatcaagactttttataaaatataaataag 41762078  T
Q  101 tcttgtggtattcaattaggacaattatgannnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttag 200  Q
    ||||||||||||||| || |||||| | ||         ||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||| || |    
T  41762079 tcttgtggtattcaactaagacaatcaagactttttttgaatacaacgaaat-cgttggtattcaattaggatttctcacaacttataaaatgtcttttg 41762177  T
Q  201 atattcaaaaattgatagattttgatggattcttttatggaatagattttgtga 254  Q
     |||| |||| || || ||| |||||| ||||||||||||| | ||||||||||    
T  41762178 gtatttaaaattttatggatattgatgaattcttttatggagtggattttgtga 41762231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 38230772 - 38231032
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||||  ||  |||| ||  |||||||||||||||   ||||||||||| |||| ||||    
T  38230772 gggtgtattgaattgggatttcaagggattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagacttttataaaatttaaacaaat 38230871  T
Q  102 cttgtggtattcaattaggacaattatga-nnnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttag 200  Q
    ||||||||||||||| | |||||| ||||          || ||||  ||||||||||||||||||||  |||||||||  |||||| || ||||| | |    
T  38230872 cttgtggtattcaatcaagacaatcatgactttttttttaaggcaacaaaatccgttggtattcaattgagatttctcatgacttatgaattgtccattg 38230971  T
Q  201 atattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
     ||||||||| |  ||||||||||||||||||||  ||||||| |||||||||||||||||    
T  38230972 gtattcaaaagtctatagattttgatggattcttggatggaatggattttgtgagactttt 38231032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 261
Target Start/End: Complemental strand, 28847183 - 28846926
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatctt 104  Q
    |||||||||||||||||| || |||||||| ||||||||||||| ||| |||| ||  ||||||||||||||||  |||||| ||||  |||||||||||    
T  28847183 tgtattggattgagattttaaaggattttaaaagacttttttataataaaaaagtctagtggtattcaatcaaaacttttatgaaatgaaaataaatctt 28847084  T
Q  105 gtggtattcaattaggacaattatga-nnnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagata 203  Q
    |||||||||||||| |||||| ||||         ||  || ||||||||||| |||||||||||  ||||||||   |||||| || ||||| | | ||    
T  28847083 gtggtattcaattaagacaatcatgactttttgttcagggccatgaaatccgtcggtattcaattgagatttctcttgacttattaattgtccattggta 28846984  T
Q  204 ttcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
    |||||||||  ||||||||||||||||| ||  || | || |||||||| ||||||||    
T  28846983 ttcaaaaatctatagattttgatggatttttggattggatggattttgtaagactttt 28846926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 8584089 - 8583970
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||| || |||| || ||||||||||||||||  ||||||   ||| ||||  | |    
T  8584089 gggtgtattggattgagatttcaaaggattttaaaagacttttttattttataaaagtcttgtggtattcaatcaagatttttaaggaatgtaaaacatt 8583990  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||||||||||||||||||    
T  8583989 cttgtggtattcaattagga 8583970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 44646721 - 44646835
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| ||  |||||||||| ||||||| |||||||||| || ||| ||||||| ||||||||||||||||   |||||||||| ||||||||||    
T  44646721 gggtgtattgaatcaagatttcaagagattttaaaagactttttaatgataaaaaaatcttgtggtattcaatcaagacttttataaaacataaataaat 44646820  T
Q  102 cttgtggtattcaat 116  Q
    ||| |||||||||||    
T  44646821 cttatggtattcaat 44646835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 53271911 - 53272032
Alignment:
Q  4 gtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatct 103  Q
    |||||||| |||| ||||||| ||||||||| ||||||||||||  ||| |||| || |||| |||||||||||   ||||||| ||||||||||||| |    
T  53271911 gtgtattgaattgggatttcatgggattttaaaagacttttttaaaataaaaaagtcttgtgatattcaatcaagacttttatataatataaataaatat 53272010  T
Q  104 tgtggtattcaattaggacaat 125  Q
    ||||||||||||| | ||||||    
T  53272011 tgtggtattcaatcaagacaat 53272032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 223
Target Start/End: Original strand, 16018903 - 16019123
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||||||| || ||||| | ||||||| |||||||||| |||||| |||| |  || |||| ||||||||   |||||||||||||||||||||    
T  16018903 gggtgtattggattcaggtttcacgagattttaaaagactttttaattataaaaaagttttgaggtaatcaatcaa--cttttataaaatataaataaat 16019000  T
Q  102 cttgtggtattcaattaggacaattatga-nnnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttag 200  Q
     ||||  |||| ||||| |||||| ||||         |||| ||| ||||| |||||||||||||||  ||||| |||  ||||||||||||||| | |    
T  16019001 tttgtaatatttaattaagacaatcatgattcttttttcaatacaacgaaattcgttggtattcaattgagatttttcattacttataaaatgtccattg 16019100  T
Q  201 atattcaaaaattgatagatttt 223  Q
    ||||||||| ||  |||||||||    
T  16019101 atattcaaatatacatagatttt 16019123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 44929877 - 44929996
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    ||||||||||||||||||||| ||  ||||||| || |||||||| || || |||| || ||||||||||||||||  ||||||   ||||||||  | |    
T  44929877 gggtgtattggattgagattttaaaagattttaaaatacttttttgttttataaaagtcttgtggtattcaatcaagatttttaaggaatataaaatatt 44929976  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||||||||||||||||||    
T  44929977 cttgtggtattcaattagga 44929996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 20538993 - 20539057
Alignment:
Q  64 tggtattcaatcaa-actttttataaaatataaataaatcttgtggtattcaattaggacaatta 127  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  20538993 tggtattcaatcaagactttttacaaaatataaataaatcttgtggtattcaatcaagacaatta 20539057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 16653254 - 16653377
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| |||| ||||||| || |||||| ||||| |||| |  | | |||| || ||||||||||||||||   |||||||||||||| ||||||    
T  16653254 gggtgtattgaattgggatttcatggaattttaaaagacattttaaaaaaaaaaaagtcttgtggtattcaatcaagaattttataaaatatacataaat 16653353  T
Q  102 cttgtggtattcaattaggacaat 125  Q
     |||| ||||||||||| ||||||    
T  16653354 tttgttgtattcaattaagacaat 16653377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 8880444 - 8880563
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtatt-caatcaaactttttataaaatataaataaa 100  Q
    |||||||||||||| ||||||||| |||||||| ||||||||||| || || ||||||| ||||||||| |||| ||  ||||||   ||| ||||  |     
T  8880444 gggtgtattggatt-agatttcaaaggattttaaaagacttttttgttttataaaaatcttgtggtattccaattaagatttttaaggaatgtaaaacat 8880542  T
Q  101 tcttgtggtattcaattagga 121  Q
    |||||||||||||||||||||    
T  8880543 tcttgtggtattcaattagga 8880563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 25935786 - 25935906
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagac-ttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||||| || |||| |  | ||||||||||||||  ||||||   ||| ||||  |     
T  25935786 gggtgtattggattgagatttcaaaggattttaaaagactttttttattttataaaagttttatggtattcaatcaagatttttaaggaatgtaaaacat 25935885  T
Q  101 tcttgtggtattcaattagga 121  Q
    ||||||| |||||||||||||    
T  25935886 tcttgtgatattcaattagga 25935906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 27529085 - 27529202
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    ||||||||||||||||||||||||| ||||||      |||||| || |||  |||||| ||| |||||||||||    |||||| ||||||||  ||||    
T  27529085 gggtgtattggattgagatttcaagagatttt------ctttttgatgataataaaatcgtgttgtattcaatcatgacttttatgaaatataagaaaat 27529178  T
Q  102 cttgtggtattcaattaggacaat 125  Q
    ||||||||||||||||| ||||||    
T  27529179 cttgtggtattcaattaagacaat 27529202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 42218488 - 42218416
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaat 74  Q
    |||||||||||||||||||||||| |||||||| || |||||||| || || |||| || |||||||||||||    
T  42218488 gggtgtattggattgagatttcaaaggattttaaaaaacttttttgttttataaaagtcttgtggtattcaat 42218416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 52109409 - 52109525
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatctt 104  Q
    |||||| |||| |||||| || | |||||| ||||||||||| || || ||||||| ||||||||||||||||  ||||||   ||| ||||  | ||||    
T  52109409 tgtattagatttagattttaaagtattttaaaagacttttttgttttataaaaatcttgtggtattcaatcaagatttttaaggaatgtaaaacattctt 52109508  T
Q  105 gtggtattcaattagga 121  Q
    |||||||||||||||||    
T  52109509 gtggtattcaattagga 52109525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 56397443 - 56397557
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| ||||||||||||| ||||||||  |||||||||||| | |  |||||| || |||||| | ||||   ||||||  ||| |||||||||    
T  56397443 gggtgtattgaattgagatttcaaaggattttaatagacttttttatgaaaagaaaatcttgaggtattgattcaagacttttatggaatctaaataaat 56397542  T
Q  102 cttgtggtattcaat 116  Q
     ||||||||||||||    
T  56397543 tttgtggtattcaat 56397557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 118
Target Start/End: Complemental strand, 1848532 - 1848495
Alignment:
Q  81 ttttataaaatataaataaatcttgtggtattcaatta 118  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1848532 ttttataaaatataaataaatcttgtggtattcaatta 1848495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 33450221 - 33450149
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaat 74  Q
    |||||||||||||||||||||||| |||||||| ||||||||||  || || |||| || ||| |||||||||    
T  33450221 gggtgtattggattgagatttcaatggattttaaaagactttttcgttttaaaaaagtcgtgtagtattcaat 33450149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 35261615 - 35261659
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagactttttt 46  Q
    |||||||||||||||||||||||| |||||||| |||||||||||    
T  35261615 gggtgtattggattgagatttcaaaggattttaaaagactttttt 35261659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 3436036 - 3435922
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||| |||||||||||||||| || |||||||| ||||||||||| || || ||||     |||||||||||||||   |||||   ||| ||||  |||    
T  3436036 gggtttattggattgagattttaaaggattttaaaagacttttttgttttataaaa-----gtggtattcaatcaagaattttaaggaatgtaaaacaat 3435942  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||||||||||||||||||    
T  3435941 cttgtggtattcaattagga 3435922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 37915674 - 37915788
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa-actttttataaaatataaataaa 100  Q
    ||||||||||||||  ||||  | ||||||||| |||||||||| |||||  |||| || |||||||||||||||| ||||||| |||  || ||| ||     
T  37915674 gggtgtattggattatgattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgtaactta-aaaaaag 37915772  T
Q  101 tcttgtggtattcaat 116  Q
    ||||||||||||||||    
T  37915773 tcttgtggtattcaat 37915788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 42315047 - 42315093
Alignment:
Q  149 aaatccgttggtattcaattaggatttctcacaacttataaaatgtc 195  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||||    
T  42315047 aaatccgttggtattcaattaagatttctaaaaacttataaaatgtc 42315093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 37828693 - 37828605
Alignment:
Q  28 gattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa-actttttataaaatataaataaatcttgtggtattcaat 116  Q
    ||||||| |||||||||| |||||  |||| || |||||||||||||||| |||||||  ||| || ||| |||||||||||||||||||    
T  37828693 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaaatta-aaaaaaatcttgtggtattcaat 37828605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 7250091 - 7250015
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||||||   ||||  |||| |||||| ||||||||||||| ||  ||||||| ||||||||||||||||    
T  7250091 agggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaa 7250015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 23987148 - 23987220
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||| | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  23987148 tgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 23987220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24131290 - 24131214
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||||||   ||||  ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  24131290 agggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 24131214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 28541586 - 28541662
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||||||   ||||  ||||||||||| ||||| ||||||||||  |||| || ||||||||||||||||    
T  28541586 agggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttgtggtattcaatcaa 28541662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 56397591 - 56397703
Alignment:
Q  149 aaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagatt 248  Q
    ||||||||||||||||||||| ||||||| | ||||||||| |||||    | |||| |||| | ||  |||||| |||||||| ||| || ||| ||||    
T  56397591 aaatccgttggtattcaattaagatttctaagaacttataacatgtctcgtggtattgaaaattagacggattttaatggattcatttgtgtaatggatt 56397690  T
Q  249 ttgtgagactttt 261  Q
     ||||||||||||    
T  56397691 gtgtgagactttt 56397703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 7820096 - 7820215
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||| |||||||||||||||||||  ||||||| ||||||| ||| || || |||| |  |||||||||| |||||| |||| |   ||| ||||  | |    
T  7820096 gggtatattggattgagatttcaaatgattttaaaagacttatttgttttataaaagttttgtggtattccatcaaaattttcaaggaatctaaaacatt 7820195  T
Q  102 cttgtggtattcaattagga 121  Q
     |||||||||||||||||||    
T  7820196 tttgtggtattcaattagga 7820215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 39479674 - 39479599
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||   ||||| |||  |||||| ||||||||||||| ||| |||| || ||||||||||||||||    
T  39479674 gggtgtattggatcatgattttaagaaattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaa 39479599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 45332666 - 45332785
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||  ||||||||||||| | |||||| ||||||||||| || || |||  || |  ||||||||||||||  |||||   ||| ||||  | |    
T  45332666 gggtgtattcaattgagatttcaaagaattttaaaagacttttttgttttaaaaatgtctttaggtattcaatcaaaacttttaaggaatctaaaacatt 45332765  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||||||||||||||||||    
T  45332766 cttgtggtattcaattagga 45332785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 53272090 - 53272169
Alignment:
Q  182 acttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
    ||||||||||||||  | | ||||||||| |  | | ||||| ||||||||||||||||| | |||||||||||||||||    
T  53272090 acttataaaatgtctattggtattcaaaagtatacatattttaatggattcttttatggagtggattttgtgagactttt 53272169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 54509714 - 54509789
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||  ||||||||||||| |||||||| ||||||||||| || || |||| || |  |||||||||||||    
T  54509714 gggtgtattcaattgagatttcaaaggattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaa 54509789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 47685145 - 47685219
Alignment:
Q  3 ggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||  |||||||||||||  ||||||| ||||||||||| || || ||||||| |  |||||||||||||    
T  47685145 ggtgtattcaattgagatttcaaaagattttaaaagacttttttgttttaaaaaaatctttaggtattcaatcaa 47685219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 543888 - 543989
Alignment:
Q  29 attttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgtggtattcaattaggacaattat 128  Q
    |||||| |||||||||| |  ||| |||| || |||| |||||||| ||| |||||||  |||||||| ||||  ||||||||||||| | |||||| ||    
T  543888 attttaaaagactttttaaaaataaaaaagtcttgtgatattcaattaaattttttattgaatataaagaaattatgtggtattcaatcaagacaatcat 543987  T
Q  129 ga 130  Q
    ||    
T  543988 ga 543989  T

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Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 32951131 - 32951078
Alignment:
Q  24 aagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  32951131 aagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaa 32951078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 34228877 - 34228824
Alignment:
Q  24 aagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  34228877 aagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 34228824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 5441296 - 5441368
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  5441296 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 5441368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 20021236 - 20021308
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||   |||| ||||||||||| |||||||||| |||||  |||| || ||||||||| ||||||    
T  20021236 tgtattggattataattttaagggattttaaaagactttttaattatgaaaaagtcttgtggtatttaatcaa 20021308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 27767948 - 27768020
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  27767948 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 27768020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 30967613 - 30967541
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||| | ||||||||| |||| ||||| |||||  |||| || ||||||||||||||||    
T  30967613 tgtattggattatgattttatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaa 30967541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 36094331 - 36094279
Alignment:
Q  64 tggtattcaatcaaactttttataaaatataaataaatcttgtggtattcaat 116  Q
    ||||||||||||||  ||||||||||| |||||||||| || || ||||||||    
T  36094331 tggtattcaatcaagatttttataaaacataaataaatattatgatattcaat 36094279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 40537462 - 40537390
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaat 74  Q
    |||||||||||||   ||||  ||||||||||| ||||||||| ||| ||| |||| || |||||||||||||    
T  40537462 gggtgtattggatcatgattgtaagggattttaaaagacttttgtatcataaaaaagtcttgtggtattcaat 40537390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 41881401 - 41881325
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagactt-ttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||   ||||| ||||||||||| ||||||| |||||| ||  |||| || ||||||||||||||||    
T  41881401 gggtgtattggatcatgattttaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaa 41881325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 42314962 - 42315022
Alignment:
Q  65 ggtattcaatcaaactttttataaaatataaataaatcttgtggtattcaattaggacaat 125  Q
    |||||| ||||||  |||||||  ||| |||||||||||||||||||||||| | ||||||    
T  42314962 ggtattgaatcaagatttttatggaatctaaataaatcttgtggtattcaatgaagacaat 42315022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 49835106 - 49835054
Alignment:
Q  26 gggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaa 78  Q
    ||||||||| |||||||||| |||||  |||| || |||||||||||||||||    
T  49835106 gggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaa 49835054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 54341036 - 54341108
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  54341036 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 54341108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 55302731 - 55302807
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||| ||   ||||| ||||||||||||||||||||||||| ||  |||| |  | ||||||||||||||    
T  55302731 agggtgtattgaatcatgattttaagggattttagaagacttttttataatgaaaaagtgttatggtattcaatcaa 55302807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 3e-66; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 28594527 - 28594265
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagactttttt-attatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaa 100  Q
    ||||||||| ||||| ||||| ||| ||||||| ||||||||||| |||||| |||| || ||||||||||||||||  ||||||||||| |||||||||    
T  28594527 gggtgtatttgattgggattttaagagattttaaaagactttttttattataaaaaagtcttgtggtattcaatcaagatttttataaaacataaataaa 28594428  T
Q  101 tcttgtggtattcaattaggacaattatgannnnnnnn--caatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtcctt 198  Q
    |||||||||||| ||||| |||||| ||||          |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  28594427 tcttgtggtatttaattaagacaatcatgactttttttttcaatacaacgaaatccgttggtattcaattaggatttctcacaacttataaaatgtcttt 28594328  T
Q  199 agatattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
     | |||||||||||||||||||||| ||||||||||||||  ||| |||||||||||||||||    
T  28594327 cggtattcaaaaattgatagattttaatggattcttttatataatggattttgtgagactttt 28594265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 27786209 - 27786463
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaa 100  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||| || |||||||||||      |||||   ||||||||||||||    
T  27786209 agggtgtattggattaagatttcaagggattttaaaagacttttttattataaaaaagtcttgtggtattca------cttttataaaaatataaataaa 27786302  T
Q  101 tcttgtggtattcaattaggacaattatgannnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttag 200  Q
    |||||||||||||||||| |||||| ||||        ||||  || |||||||||   |||||||||| ||||||||||||||||||||||||| || |    
T  27786303 tcttgtggtattcaattaagacaatcatgactttttttcaatataacgaaatccgtcattattcaattatgatttctcacaacttataaaatgtcattcg 27786402  T
Q  201 atattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
     |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  27786403 gtattcaaaaattgatagattttaatggattcttttatggaatggattttgtgagactttt 27786463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 3 - 259
Target Start/End: Complemental strand, 26795595 - 26795339
Alignment:
Q  3 ggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatc 102  Q
    ||||| ||||||||| ||||||||| |||||| || ||||||| |||||| |||| || |||||||||||||||||  ||||||||||||||||||||||    
T  26795595 ggtgttttggattgaaatttcaaggaattttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaaaacttttataaaatataaataaatc 26795496  T
Q  103 ttgtggtattcaattaggacaattatga-nnnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttaga 201  Q
    |||| ||||||||||| |||||| | ||         |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| || |     
T  26795495 ttgtagtattcaattaagacaatcaagacttttttttcaatgcaacgaaatccattggtattcaattaggatttctcacaacttataaaatgtctttggg 26795396  T
Q  202 tattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactt 259  Q
    |||||||||||||||||| || |||  |||| ||||||| || |||||||||||||||    
T  26795395 tattcaaaaattgatagacttcgattaattc-tttatgggatggattttgtgagactt 26795339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 219
Target Start/End: Complemental strand, 26806659 - 26806442
Alignment:
Q  3 ggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatc 102  Q
    ||||| ||||||||| ||||||||| |||||| || ||||||| |||||| |||| || ||||||||||||||||   ||||||||||||||||||||||    
T  26806659 ggtgttttggattgaaatttcaaggaattttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaagacttttataaaatataaataaatc 26806560  T
Q  103 ttgtggtattcaattaggacaattatga-nnnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttaga 201  Q
    |||| ||||||||||| |||||| | ||         |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| || |     
T  26806559 ttgtagtattcaattaagacaatcaagacttttttttcaatgcaacgaaatccattggtattcaattaggatttctcacaacttataaaatgtctttggg 26806460  T
Q  202 tattcaaaaattgataga 219  Q
    ||||||||||||||||||    
T  26806459 tattcaaaaattgataga 26806442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 26795705 - 26795601
Alignment:
Q  14 ttgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgtggtattc 113  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  26795705 ttgagatttcaagggattttaaaagacttttttattataaaaaaatcttgtggtattcaatcaagacttttataaaatataaataaatcttgtggtattc 26795606  T
Q  114 aatta 118  Q
    |||||    
T  26795605 aatta 26795601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 9689420 - 9689169
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    ||||||||| |||| |||||||||| ||||||| |||| ||||| |||||| ||||||| || |||||||||||||  ||||||||||||||||||||||    
T  9689420 gggtgtatttgatttagatttcaagagattttaaaagattttttaattataaaaaaatcttgaggtattcaatcaagatttttataaaatataaataaat 9689321  T
Q  102 cttgtggtattcaattaggacaattatgannnnnnnn-caatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttag 200  Q
    |||         ||||| |||||| || |         |||||||| |||||||||||||||||||||  |||||||||  ||||||||||||||| | |    
T  9689320 ctt---------aattaagacaatcataattcttttttcaatgcaacgaaatccgttggtattcaattgagatttctcattacttataaaatgtccattg 9689230  T
Q  201 atattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
    ||||||||||||  ||||||||| ||||||| ||  ||||| |  ||||||||||||||||    
T  9689229 atattcaaaaatacatagattttaatggattattggatggagtgaattttgtgagactttt 9689169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 26806769 - 26806665
Alignment:
Q  14 ttgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgtggtattc 113  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||| |||| |||||||||||   |||||||||||||||||||||||||||||||||    
T  26806769 ttgagatttcaagggattttaaaagacttttttattataaaaaaatcttgtgatattcaatcaagacttttataaaatataaataaatcttgtggtattc 26806670  T
Q  114 aatta 118  Q
    |||||    
T  26806669 aatta 26806665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 261
Target Start/End: Complemental strand, 2276286 - 2276029
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatctt 104  Q
    ||||||| ||||||| |||||||||||||| ||| ||||||||| ||| ||||||   |||||||||||||||   ||||||||||| ||||||||||||    
T  2276286 tgtattgaattgagaattcaagggattttaaaagtcttttttataataaaaaaatttagtggtattcaatcaagacttttataaaatgtaaataaatctt 2276187  T
Q  105 gtggtattcaattaggacaattatga-nnnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagata 203  Q
    ||||||||||||||  ||||| ||||          || ||||  |||| ||||||||||||||||  ||||||||  |||||| || ||||  | ||||    
T  2276186 gtggtattcaattaaaacaatcatgattttttttttaaggcaacaaaattcgttggtattcaattaaaatttctcatgacttatgaattgtctattgata 2276087  T
Q  204 ttcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
    ||||||| |  ||||||||| |||||||||||| |  ||| |||||||||||| ||||    
T  2276086 ttcaaaagtctatagattttaatggattcttttgtataatggattttgtgagattttt 2276029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 39753435 - 39753563
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||   ||| |||| |   |||||||||||||||   |||||||||||||||| ||||    
T  39753435 gggtgtattggattgtgatttcaacggattttagaagactttttttaaataaaaaagtttggtggtattcaatcaagacttttataaaatataaaaaaat 39753534  T
Q  102 cttgtggtattcaattaggacaattatga 130  Q
    |||||| |||||||| | |||||| ||||    
T  39753535 cttgtgatattcaatcaagacaatcatga 39753563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 40410590 - 40410709
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| || || |||| || ||||||||||||||||  ||||||   ||| ||||  | |    
T  40410590 gggtgtattggattgagatttcaatggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaaggaatgtaaaacatt 40410689  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||||||||||||||||||    
T  40410690 cttgtggtattcaattagga 40410709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 3604537 - 3604412
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| |||||||||||||  |||||||  ||||||| |||| | |  |||||| || |||||| |||||||  |||||| |||| |||||||||    
T  3604537 gggtgtattgaattgagatttcaaatgattttaatagactttcttatgaaaagaaaatcttgaggtattgaatcaaaacttttatgaaatctaaataaat 3604438  T
Q  102 cttgtggtattcaattaggacaatta 127  Q
    ||||||||||||||| | ||||||||    
T  3604437 cttgtggtattcaatcaagacaatta 3604412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 261
Target Start/End: Original strand, 378245 - 378493
Alignment:
Q  15 tgagatttcaagggattttagaagactttttt-attatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgtggtattc 113  Q
    ||||||||||| ||||||||  ||| |||||| || ||| | || || ||||||||||||||||   || |||||||| |||||||||||||| ||||||    
T  378245 tgagatttcaaaggattttaatagattttttttatgataaagaagtcttgtggtattcaatcaagacttctataaaatctaaataaatcttgtagtattc 378344  T
Q  114 aattaggacaattatgannnnnnnn-caatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaat 212  Q
    ||| |  ||||| | ||         |||  ||| |||||  ||||||||||||||  ||||||| | |||||||||||||||  | ||| || |||| |    
T  378345 aatcaaaacaatcaagacttttttttcaagacaacgaaatatgttggtattcaattgagatttctaagaacttataaaatgtctctcgatgttgaaaatt 378444  T
Q  213 tgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
    ||||||||||| |||||||||| |||||||| |||| ||||| ||||||    
T  378445 tgatagattttaatggattcttctatggaatggattgtgtgaaactttt 378493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 10571113 - 10571230
Alignment:
Q  4 gtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatct 103  Q
    |||||||||||||||||||||| |||||||| || |||||||  || || |||| || |||| |||||||||||| ||||||   ||| ||||  | |||    
T  10571113 gtgtattggattgagatttcaatggattttaaaaaactttttcgttttataaaagtcttgtgatattcaatcaaaatttttaaggaatgtaaaacattct 10571212  T
Q  104 tgtggtattcaattagga 121  Q
    ||||||||||||||||||    
T  10571213 tgtggtattcaattagga 10571230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 7857024 - 7857100
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||| |||||||||||  | |||||||| ||||||||||  ||||||||||||| || |||||||||||||    
T  7857024 agggtgtattagattgagatttagaaggattttaaaagactttttggttatagaaaaatcttgaggtattcaatcaa 7857100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 17518431 - 17518547
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatctt 104  Q
    |||||| |||||||||||||| |||||||| ||||||||||  || || |||| || ||||||||||||||||  ||||||   ||| ||||  | ||||    
T  17518431 tgtattagattgagatttcaatggattttaaaagactttttcgttttaaaaaagtcttgtggtattcaatcaagatttttaaggaatgtaaaacattctt 17518530  T
Q  105 gtggtattcaattagga 121  Q
    ||| |||||||||||||    
T  17518531 gtgctattcaattagga 17518547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 261
Target Start/End: Original strand, 36682051 - 36682155
Alignment:
Q  157 tggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagattttgtgaga 256  Q
    ||||||||||| | ||||| |  |||| |||||||||||  ||| ||||||||||| | ||||||||||||||||||||| |    |||||||| |||||    
T  36682051 tggtattcaatcaagatttgtaccaacctataaaatgtctataggtattcaaaaataggtagattttgatggattcttttgtacggtagattttatgaga 36682150  T
Q  257 ctttt 261  Q
    |||||    
T  36682151 ctttt 36682155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 5273276 - 5273202
Alignment:
Q  4 gtgtattggattgagatttcaagggattttagaagacttttttattat-agaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||   ||||| ||||||||||| ||||||||||||| || | ||||||| ||||||||||||||||    
T  5273276 gtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaaaatcttgtggtattcaatcaa 5273202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 261
Target Start/End: Complemental strand, 3604389 - 3604277
Alignment:
Q  149 aaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagatt 248  Q
    ||||||||||||||||||||| ||||| | | |||||||||||||||    | |||| |||| | || ||||||| |||||||| |||  | ||| ||||    
T  3604389 aaatccgttggtattcaattaagatttttaagaacttataaaatgtctcgtggtattgaaaattagacagattttaatggattcatttgcgtaatggatt 3604290  T
Q  249 ttgtgagactttt 261  Q
     ||||||||||||    
T  3604289 gtgtgagactttt 3604277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 14000418 - 14000307
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa-actttttataaaatataaataaatct 103  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  |||| || |||||||||||||||| |||||||  ||  || ||| ||||||    
T  14000418 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaattta-aaaaaaatct 14000320  T
Q  104 tgtggtattcaat 116  Q
    |||||||||||||    
T  14000319 tgtggtattcaat 14000307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 33656360 - 33656284
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||||||   ||||| ||||||||||| |||| |||||||| ||  |||| || ||||||||||||||||    
T  33656360 agggtgtattggatcatgattttaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaa 33656284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 6828876 - 6828801
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||  ||||||||||||| |||||||| ||||||||||| || || |||| || |  |||||||||||||    
T  6828876 gggtgtattcaattgagatttcaaaggattttaaaagacttttttgttttaaaaaagtctttgggtattcaatcaa 6828801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 7017013 - 7016938
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||   ||||  ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  7017013 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 7016938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 21146957 - 21147032
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||   ||||  ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  21146957 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcgtgtggtattcaatcaa 21147032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 16894153 - 16894100
Alignment:
Q  24 aagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaa 78  Q
    ||||||||||| ||||||||||||| ||| |||| || |||||||||||||||||    
T  16894153 aagggattttaaaagacttttttatcata-aaaattcttgtggtattcaatcaaa 16894100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 4550570 - 4550498
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  4550570 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 4550498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 40460582 - 40460538
Alignment:
Q  81 ttttataaaatataaataaatcttgtggtattcaattaggacaat 125  Q
    ||||||| ||||||||||||| |||||||||||||| | ||||||    
T  40460582 ttttatagaatataaataaatattgtggtattcaatcaagacaat 40460538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 2e-64; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 259
Target Start/End: Complemental strand, 10216123 - 10215868
Alignment:
Q  3 ggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatc 102  Q
    ||||| ||||||||| ||||||||| |||||| || ||||||| |||||| |||| || |||||||||||||||||  ||||||||||||||||||||||    
T  10216123 ggtgttttggattgaaatttcaaggaattttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaaaacttttataaaatataaataaatc 10216024  T
Q  103 ttgtggtattcaattaggacaattatgannnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagat 202  Q
    |||||||||||||||| |||||  |  |        |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| | |    
T  10216023 ttgtggtattcaattaagacaagcaaaactttttttcaatgcaacgaaatccattggtattcaattaggatttctcacaacttataaaatgtccttgggt 10215924  T
Q  203 attcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactt 259  Q
    |||||||||||||||||||| |||| |||| ||||||| || |||||||| ||||||    
T  10215923 attcaaaaattgatagatttcgatgaattc-tttatgggatggattttgtaagactt 10215868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 259
Target Start/End: Complemental strand, 10225752 - 10225497
Alignment:
Q  3 ggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatc 102  Q
    ||||| ||||||||| ||||||||| |||||| || ||||||| |||||| |||| || ||||||||||||||||   ||||||||||||||||||||||    
T  10225752 ggtgttttggattgaaatttcaaggaattttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaagacttttataaaatataaataaatc 10225653  T
Q  103 ttgtggtattcaattaggacaattatgannnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagat 202  Q
    |||| ||||||||||| |||||| | ||        |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| | |    
T  10225652 ttgtagtattcaattaagacaatcaagactttttttcaatgcaacgaaatccattggtattcaattaggatttctcacaacttataaaatgtccttgggt 10225553  T
Q  203 attcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactt 259  Q
    |||||||||||||||||||| |||| |||| ||||||  || |||||||||||||||    
T  10225552 attcaaaaattgatagatttcgatgaattc-tttatgtgatggattttgtgagactt 10225497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 45927033 - 45926769
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtg----gtattcaatcaaactttttataaaatataaat 97  Q
    ||||||||||||||||||||| || |||||||| |||||||||| |||||| |||| || |||     ||||||||||||   || ||||||||||||||    
T  45927033 gggtgtattggattgagattttaaaggattttaaaagactttttgattataaaaaagtcttgtacgtagtattcaatcaagacttctataaaatataaat 45926934  T
Q  98 aaatcttgtggtattcaattaggacaattatgannnnnnnn-caatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtcc 196  Q
    ||||||||||||||||||||| |||||| ||||         |||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||     
T  45926933 aaatcttgtggtattcaattaagacaatcatgacatttttttcaatacaacgaaatccgttggtattcaattaggatttctcacaacttataaaatctca 45926834  T
Q  197 ttagatattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
    || | |||||||||||||||||||||| ||||||||||||||| ||   ||||||||||||||||    
T  45926833 ttcggtattcaaaaattgatagattttaatggattcttttatgcaacgtattttgtgagactttt 45926769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 3 - 259
Target Start/End: Complemental strand, 10104976 - 10104720
Alignment:
Q  3 ggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatc 102  Q
    ||||| ||||||||| ||||||||| |||||| || ||||||| |||||| |||| || |||||||||||||||||  ||||||||||||||||||||||    
T  10104976 ggtgttttggattgaaatttcaaggaattttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaaaacttttataaaatataaataaatc 10104877  T
Q  103 ttgtggtattcaattaggacaattatga-nnnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttaga 201  Q
    |||| ||||||||||| |||||| | ||         |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| || |     
T  10104876 ttgtagtattcaattaagacaatcaagacttttttttcaatgcaacgaaatccattggtattcaattaggatttctcacaacttataaaatgtctttggg 10104777  T
Q  202 tattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactt 259  Q
    |||||||||||||||||| || |||  |||| ||||||| || |||||||||||||||    
T  10104776 tattcaaaaattgatagacttcgattaattc-tttatgggatggattttgtgagactt 10104720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 22 - 261
Target Start/End: Original strand, 46749271 - 46749510
Alignment:
Q  22 tcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgtggtattcaattagga 121  Q
    |||| |||||||| |||| |||||||||||| |||| || ||||||| | ||||||   |||||||||||||||||||||||| ||||||||||||| ||    
T  46749271 tcaatggattttaaaagatttttttattataaaaaagtcttgtggtaatgaatcaagacttttataaaatataaataaatcttatggtattcaattaaga 46749370  T
Q  122 caattatgannnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagatatt-caaaaattgatagat 220  Q
    |||| | ||        |||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||  | | ||||  ||||||| ||||||    
T  46749371 caatcaagattttttttcaatgcaacgaaatccgttgatattcaattaagatttctcacaacttataaaatgtctgttgctattaaaaaaattaatagat 46749470  T
Q  221 tttgatggattcttttatggaatagattttgtgagactttt 261  Q
    ||||||||||| ||||||||| | ||||||| |||||||||    
T  46749471 tttgatggatt-ttttatggagtggattttgagagactttt 46749510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 10105086 - 10104982
Alignment:
Q  14 ttgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgtggtattc 113  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  10105086 ttgagatttcaagggattttaaaagacttttttattataaaaaaatcttgtggtattcaatcaagacttttataaaatataaataaatcttgtggtattc 10104987  T
Q  114 aatta 118  Q
    |||||    
T  10104986 aatta 10104982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 10225862 - 10225758
Alignment:
Q  14 ttgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgtggtattc 113  Q
    ||||||||||||||||||||| ||||||||||||||||| |||| || |||| |||||||||||   |||||||||||||||||||||||||||||||||    
T  10225862 ttgagatttcaagggattttaaaagacttttttattataaaaaagtcttgtgctattcaatcaagacttttataaaatataaataaatcttgtggtattc 10225763  T
Q  114 aatta 118  Q
    |||||    
T  10225762 aatta 10225758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 10216233 - 10216129
Alignment:
Q  14 ttgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgtggtattc 113  Q
    ||||||||| ||||||||||| |||| |||||||||||| |||| || ||||||||||||||||   |||||||||||||||||||||||||| ||||||    
T  10216233 ttgagatttaaagggattttaaaagatttttttattataaaaaagtcttgtggtattcaatcaagacttttataaaatataaataaatcttgtcgtattc 10216134  T
Q  114 aatta 118  Q
    |||||    
T  10216133 aatta 10216129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 45215486 - 45215362
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaa 100  Q
    ||||||||||  ||| |||||| ||||||||||| |||||||||| || ||| ||||||| |||||||||||||||||  |||||||||| |||||||||    
T  45215486 agggtgtattaaattaagatttgaagggattttaaaagactttttaataataaaaaaatcttgtggtattcaatcaaaacttttataaaacataaataaa 45215387  T
Q  101 tcttgtggtattcaattaggacaat 125  Q
    |||  ||||||| ||| | ||||||    
T  45215386 tctcatggtattgaatcaagacaat 45215362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 19552232 - 19552113
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    ||||||||||||||||||||| || |||||||| |||| ||||||||| || |||| || ||||||||||||||||  ||||||  |||| ||||  | |    
T  19552232 gggtgtattggattgagattttaaaggattttaaaagatttttttattttataaaagtcttgtggtattcaatcaagatttttaagaaatgtaaaacatt 19552133  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||||||||||||||||||    
T  19552132 cttgtggtattcaattagga 19552113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 50900531 - 50900412
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||||||| ||||||||| |||||||| ||||||||||| || || |||| || ||||||||||||||||  |||||| | ||| ||||  | |    
T  50900531 gggtgtattggattaagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaaagaatgtaaaacatt 50900432  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||||||||||||||||||    
T  50900431 cttgtggtattcaattagga 50900412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 38682426 - 38682541
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||| || || ||||||| ||||||||||||||||  ||||||  |||| |||| || |    
T  38682426 gggtgtattgtattgagatttcaaaggattttaaaagacttttttgttttaaaaaaatcttgtggtattcaatcaagatttttaagaaatgtaaa-aatt 38682524  T
Q  102 cttgtggtattcaatta 118  Q
     ||||||||||||||||    
T  38682525 attgtggtattcaatta 38682541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 24150916 - 24150797
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||| ||||||||||||||||||| |||||||| |||| |||||| || || ||||||| ||||||||||||||||  ||||||   ||| ||||  | |    
T  24150916 gggtatattggattgagatttcaaaggattttaaaagatttttttgttttataaaaatcttgtggtattcaatcaagatttttaaggaatgtaaaacatt 24150817  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||||||||||||||||||    
T  24150816 cttgtggtattcaattagga 24150797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 26555814 - 26555933
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| || || |||| || ||||||||||||||||  ||||||   ||| ||||  | |    
T  26555814 gggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaaggaatgtaaaatatt 26555913  T
Q  102 cttgtggtattcaattagga 121  Q
     |||||||||||||||||||    
T  26555914 attgtggtattcaattagga 26555933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 36055091 - 36054972
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| || || |||| || ||||||||||||||||  ||||||   ||| ||||  | |    
T  36055091 gggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaaggaatgtaaaacatt 36054992  T
Q  102 cttgtggtattcaattagga 121  Q
     |||||||||||||||||||    
T  36054991 tttgtggtattcaattagga 36054972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 30588839 - 30588958
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    ||||||||| |||||| |||| || |||||||| ||||||||||| || || |||| || ||||||||||||||||  |||||| | ||| ||||  | |    
T  30588839 gggtgtattagattgaaattttaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaaagaatgtaaaacatt 30588938  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||||||||||||||||||    
T  30588939 cttgtggtattcaattagga 30588958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 52024284 - 52024167
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaa-tcatgtggtattcaatcaaactttttataaaatataaataaa 100  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||| || || ||||| || ||||||||||||||||  ||||||   ||| ||||  |     
T  52024284 gggtgcattggattgagatttcaaaggattttaaaagacttttttgttttaaaaaaagtcttgtggtattcaatcaagatttttaaggaatgtaaaacat 52024185  T
Q  101 tcttgtggtattcaatta 118  Q
    ||||||||||||||||||    
T  52024184 tcttgtggtattcaatta 52024167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 26006067 - 26005948
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| || || |||| || |||  |||||||| ||| |||| |   ||| ||||  | |    
T  26006067 gggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtaatattcaataaaaattttaaaggaatgtaaaacatt 26005968  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||||||||||||||||||    
T  26005967 cttgtggtattcaattagga 26005948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 35730933 - 35731048
Alignment:
Q  3 ggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatc 102  Q
    ||||||||||||||||||||||| |||||||| |||| |||||| || || |||| || |||| |||||||||||  ||||||   ||| ||||  | ||    
T  35730933 ggtgtattggattgagatttcaaaggattttaaaagatttttttgttttataaaagtcttgtgatattcaatcaagatttttaaggaatgtaaaacattc 35731032  T
Q  103 ttgtggtattcaatta 118  Q
    ||||||||||||||||    
T  35731033 ttgtggtattcaatta 35731048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 10067769 - 10067700
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtatt 70  Q
    ||||||||||| |||||||||||||||||||||| |||||||||| |||||| |||| |  |||||||||    
T  10067769 agggtgtattgaattgagatttcaagggattttaaaagactttttcattataaaaaagttttgtggtatt 10067700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 26293649 - 26293532
Alignment:
Q  4 gtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatct 103  Q
    |||||||| ||||| ||||||| |||||||| ||||||||||| || || |||| |  ||||||||||||||||  ||||||   ||| ||||  | |||    
T  26293649 gtgtattgaattgaaatttcaaaggattttaaaagacttttttgttttataaaagttttgtggtattcaatcaagatttttaaggaatgtaaaacattct 26293550  T
Q  104 tgtggtattcaattagga 121  Q
    ||||||||||||||||||    
T  26293549 tgtggtattcaattagga 26293532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 44042067 - 44042006
Alignment:
Q  64 tggtattcaatcaaactttttataaaatataaataaatcttgtggtattcaattaggacaat 125  Q
    ||||||||||||||   ||||||| |||||||||||||||||||||||||||||| ||||||    
T  44042067 tggtattcaatcaagacttttatagaatataaataaatcttgtggtattcaattaagacaat 44042006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 261
Target Start/End: Original strand, 44701546 - 44701802
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagac-ttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatct 103  Q
    ||||||| ||||||| |||||||||||||| ||||| |||||||| ||  |||  ||  ||| |||||||||||   ||||||||||| |||| ||||||    
T  44701546 tgtattgaattgagaattcaagggattttaaaagacattttttataatgaaaatgtctagtgatattcaatcaagacttttataaaatgtaaacaaatct 44701645  T
Q  104 tgtggtattcaattaggacaattatgannnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagata 203  Q
    ||||||||||||| |  ||||| ||||         || ||||  ||||| ||||||||||||||  ||||||| |  | |||| || ||||  | | ||    
T  44701646 tgtggtattcaatcaaaacaatcatgacttttttt-aaggcaacaaaatctgttggtattcaattgagatttctaatgatttatgaattgtctattggta 44701744  T
Q  204 ttcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
    ||||||| |  |||||||||||||||||| |  ||||||| |||||| ||||||||||    
T  44701745 ttcaaaagtctatagattttgatggattcatggatggaatggattttatgagactttt 44701802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 25713524 - 25713404
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaa 100  Q
    ||||||||||| |||| |||||| | |||||||| |||| |||||  ||||||||||||| || ||||||| |||||  |||| | | | || |||||||    
T  25713524 agggtgtattgaattgggatttcgaaggattttaaaagagtttttagttatagaaaaatcttgaggtattccatcaagattttaaaagattagaaataaa 25713425  T
Q  101 tcttgtggtattcaattagga 121  Q
    ||  |||||||||||||||||    
T  25713424 tccggtggtattcaattagga 25713404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 13662548 - 13662623
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||||||||||||| | |||||| ||||||||||| || || |||| ||  |||||||||||||||    
T  13662548 gggtgtattggattgagatttcaaagaattttaaaagacttttttgttttacaaaagtctcgtggtattcaatcaa 13662623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 38629884 - 38629765
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||||||| |||||||||   |||||| ||||||||||| || || |||| || ||||||||||||||||  ||||||   ||| ||||  | |    
T  38629884 gggtgtattggattaagatttcaaataattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaaggaatgtaaaacatt 38629785  T
Q  102 cttgtggtattcaattagga 121  Q
     |||||||||||||||||||    
T  38629784 tttgtggtattcaattagga 38629765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 10055804 - 10055755
Alignment:
Q  66 gtattcaatcaaactttttataaaatataaataaatcttgtggtattcaa 115  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||||    
T  10055804 gtattcaatcaagacttttataaaatataaataaatcttgtggtattcaa 10055755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 29449155 - 29449102
Alignment:
Q  24 aagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||| ||||||||||||||||  ||||||| ||||||||||||||||    
T  29449155 aagggattttaaaagacttttttattatgaaaaaatcttgtggtattcaatcaa 29449102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 12103485 - 12103358
Alignment:
Q  3 ggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcat-gtggtattcaatcaaactttttataaaatataaataaat 101  Q
    ||||||||| |||||||||||| ||||||||  |||||||||  |  ||| |||| || | ||||||||||||| |  |||||||  |||||||||||||    
T  12103485 ggtgtattgaattgagatttcatgggatttttaaagacttttaaaa-ataaaaaagtctttgtggtattcaatctagatttttattgaatataaataaat 12103387  T
Q  102 cttgtggtattcaattaggacaattatga 130  Q
    ||||| ||||||||| | |||||| ||||    
T  12103386 cttgtagtattcaatcaagacaatcatga 12103358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 6035369 - 6035294
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||  |||| |||||| | ||||||||| |||||||||| |||||  ||||||| ||||||||||||||||    
T  6035369 gggtgtatcagattaagattttatgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaa 6035294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 34292589 - 34292474
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaa 100  Q
    ||||||||||| |||| ||| ||| || |||||| |||| ||||| |  ||| ||||||| ||| ||||||||||||  |||||||  ||| | ||||||    
T  34292589 agggtgtattgaattgggatatcatggaattttaaaagattttttaaaaataaaaaaatcttgtagtattcaatcaagatttttattgaattttaataaa 34292490  T
Q  101 tcttgtggtattcaat 116  Q
    | ||||||||||||||    
T  34292489 ttttgtggtattcaat 34292474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 23697005 - 23697130
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| ||||| ||||||| | ||||||  |||||||||||| | |  |||||| || | |||| ||||||   ||||||  ||| |||||||||    
T  23697005 gggtgtattgaattgaaatttcaaagaattttaatagacttttttatgaaaagaaaatcttgagttattgaatcaagacttttattgaatctaaataaat 23697104  T
Q  102 cttgtggtattcaattaggacaatta 127  Q
    | ||||||||||||| | ||||||||    
T  23697105 catgtggtattcaatcaagacaatta 23697130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 23715460 - 23715585
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| ||||| ||||||| | ||||||  |||||||||||| | |  |||||| || | |||| ||||||   ||||||  ||| |||||||||    
T  23715460 gggtgtattgaattgaaatttcaaagaattttaatagacttttttatgaaaagaaaatcttgagttattgaatcaagacttttattgaatctaaataaat 23715559  T
Q  102 cttgtggtattcaattaggacaatta 127  Q
    | ||||||||||||| | ||||||||    
T  23715560 catgtggtattcaatcaagacaatta 23715585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 23733916 - 23734041
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| ||||| ||||||| | ||||||  |||||||||||| | |  |||||| || | |||| ||||||   ||||||  ||| |||||||||    
T  23733916 gggtgtattgaattgaaatttcaaagaattttaatagacttttttatgaaaagaaaatcttgagttattgaatcaagacttttattgaatctaaataaat 23734015  T
Q  102 cttgtggtattcaattaggacaatta 127  Q
    | ||||||||||||| | ||||||||    
T  23734016 catgtggtattcaatcaagacaatta 23734041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 23752374 - 23752499
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| |||||||||||||   ||||||  |||||||||||| | |  |||||| || | |||| ||||||   ||||||  ||| |||||||||    
T  23752374 gggtgtattgaattgagatttcaaattattttaatagacttttttatgaaaagaaaatcttgagttattgaatcaagacttttattgaatttaaataaat 23752473  T
Q  102 cttgtggtattcaattaggacaatta 127  Q
    | ||||||||||||| | ||||||||    
T  23752474 catgtggtattcaatcaagacaatta 23752499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 35337646 - 35337699
Alignment:
Q  24 aagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||| ||||||||||||||||  |||| || ||||||||||||||||    
T  35337646 aagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaa 35337699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 10660427 - 10660499
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||| |||||  | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  10660427 tgtattggattaagattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 10660499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 23697155 - 23697267
Alignment:
Q  149 aaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagatt 248  Q
    ||||||||| ||||||||||| ||||||| | |||||||||||||||    | |||| |||| | ||  |||||| |||||||| ||| || ||| ||||    
T  23697155 aaatccgtttgtattcaattaagatttctaagaacttataaaatgtctcgtggtattgaaaattagacggattttaatggattcatttgtgtaatggatt 23697254  T
Q  249 ttgtgagactttt 261  Q
     ||||||||||||    
T  23697255 gtgtgagactttt 23697267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 996402 - 996327
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||   ||||  ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  996402 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 996327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 3206513 - 3206438
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||   ||||  ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  3206513 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 3206438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 6784180 - 6784069
Alignment:
Q  7 tattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgt 106  Q
    ||||| || |||||||||| |||||||| ||||||||||  ||||| ||||||| || | |||||||||||  |||| | | | || |||||| ||| ||    
T  6784180 tattgaatcgagatttcaaaggattttataagactttttagttatacaaaaatcttgagatattcaatcaagattttaaaagattagaaataattctggt 6784081  T
Q  107 ggtattcaatta 118  Q
    |||||| |||||    
T  6784080 ggtattaaatta 6784069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 12734157 - 12734082
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||   ||||  ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  12734157 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 12734082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 53184157 - 53184082
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||| ||||| ||||||||||||| |||||||| |||| |||||| || || |||| ||  |||||||||||||||    
T  53184157 gggtctattgaattgagatttcaatggattttaaaagatttttttgttttaaaaaagtctcgtggtattcaatcaa 53184082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 85899 - 85945
Alignment:
Q  149 aaatccgttggtattcaattaggatttctcacaacttataaaatgtc 195  Q
    ||||||||||||||||||||| ||||| | | |||||||||||||||    
T  85899 aaatccgttggtattcaattaagatttttaagaacttataaaatgtc 85945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 19253738 - 19253791
Alignment:
Q  24 aagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  19253738 aagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 19253791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 37820772 - 37820719
Alignment:
Q  24 aagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  37820772 aagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 37820719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 44762332 - 44762279
Alignment:
Q  24 aagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  44762332 aagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaa 44762279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 36674444 - 36674372
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  36674444 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 36674372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 43601766 - 43601814
Alignment:
Q  145 aatgaaatccgttggtattcaattaggatttctcacaacttataaaatg 193  Q
    ||||||||||||| |||||||||||  | ||||||||| ||||||||||    
T  43601766 aatgaaatccgttagtattcaattacaaattctcacaatttataaaatg 43601814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 50901255 - 50901203
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaa 57  Q
    ||||||||||| | |||| ||||||||||| |||||||||| |||||| ||||    
T  50901255 tgtattggattaaaattttaagggattttaaaagactttttaattataaaaaa 50901203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 3e-54; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 27198270 - 27198529
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaa 100  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||  ||||| |||| || |||||||||||||||||  ||||||||||||||||||||    
T  27198270 agggtgtattggattgagactttaagggattttaaaagactttttgtttataaaaaagtcttgtggtattcaatcaaaacttttataaaatataaataaa 27198369  T
Q  101 tcttgtggtattcaattaggacaattatga-nnnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtcctta 199  Q
    |||||||||||||||||| |||||| ||||         ||  |||| |||||||||||||||| ||||  |||||||||  |||| |||||||||| |     
T  27198370 tcttgtggtattcaattaagacaatcatgattcttttttcagcgcaacgaaatccgttggtattgaattgagatttctcattacttctaaaatgtccatt 27198469  T
Q  200 gatattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactt 259  Q
    | |||||||||||  ||||||||| |||||||||||||| || | |||||||||||||||    
T  27198470 ggtattcaaaaatatatagattttaatggattcttttatagagttgattttgtgagactt 27198529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 42657714 - 42657974
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| |||||| |||| || ||||||||||||||||   ||| ||||||||||||| |||    
T  42657714 gggtgtattggattgagatttcaagagattttaaaagactttttaattataaaaaagtcttgtggtattcaatcaagactttcataaaatataaat-aat 42657812  T
Q  102 cttgtggtattcaattaggacaattatga--nnnnnnnncaatgcaatgaaatccg-ttggtattcaattaggatttctcacaacttataaaatgtcctt 198  Q
    ||||||||||||||||| |||||| | ||          ||||| || |||||| | |||||||||||||||||||| |||||||||||||||||||| |    
T  42657813 cttgtggtattcaattaagacaatcaagactttttttttcaatgtaacgaaatctgtttggtattcaattaggatttttcacaacttataaaatgtccat 42657912  T
Q  199 agatattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
     | |||||||||||  | |||||||||||||||||| |||||||| |||||| ||||||||||    
T  42657913 tggtattcaaaaatcta-agattttgatggattcttctatggaatggattttatgagactttt 42657974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 48203348 - 48203608
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||||  ||  |||| ||  |||||||||||||||   |||||||||||||||| ||||    
T  48203348 gggtgtattgaattgggatttcaagggattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagacttttataaaatataaacaaat 48203447  T
Q  102 cttgtggtattcaattaggacaattatga-nnnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttag 200  Q
    ||||||||||||||| | |||||| ||||          || ||||  ||||||||||||||||||||  |||||||||  |||||| || ||||| |||    
T  48203448 cttgtggtattcaatcaagacaatcatgactttttttttaaggcaacaaaatccgttggtattcaattgagatttctcatgacttatgaattgtccatag 48203547  T
Q  201 atattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
     ||||||||| |  ||||||||||||||||||||  ||||||| |||||||||||||||||    
T  48203548 gtattcaaaagtctatagattttgatggattcttggatggaatggattttgtgagactttt 48203608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 19007663 - 19007404
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||| ||  |||| ||  |||||||||||||||   ||||||||||| |||| ||||    
T  19007663 gggtgtattgaattgagatttcaagggattttaaaagacttttttataatgaaaaagtctagtggtattcaatcaagacttttataaaatgtaaacaaat 19007564  T
Q  102 cttgtggtattcaattaggacaattatgannnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttaga 201  Q
    ||||||||||||||| | |||||  ||||         || ||||  ||||||||||||||||||||  |||||||||  |||||| || ||||  | |     
T  19007563 cttgtggtattcaatcaagacaaacatgacttttttttaaggcaacaaaatccgttggtattcaattgagatttctcatgacttatgaattgtctattgg 19007464  T
Q  202 tattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
    |||| |||| |  ||||||||||||||||||||  ||||||| |||||||||||||||||    
T  19007463 tattaaaaagtctatagattttgatggattcttggatggaatggattttgtgagactttt 19007404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 48194590 - 48194850
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||||  ||  |||| ||  |||||||||||||||   ||||||||||| |||| ||||    
T  48194590 gggtgtattgaattgggatttcaagggattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagacttttataaaatctaaacaaat 48194689  T
Q  102 cttgtggtattcaattaggacaattatga-nnnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttag 200  Q
    ||||||||||||||| | |||||| ||||          || ||||  ||||||||||||||||||||  |||||||||  |||||| || ||||| | |    
T  48194690 cttgtggtattcaatcaagacaatcatgactttttttttaaggcaacaaaatccgttggtattcaattgagatttctcatgacttatgaattgtccattg 48194789  T
Q  201 atattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
     ||||||||| |  ||||||||||||||||||||  ||||||| |||||||||||||||||    
T  48194790 gtattcaaaagtctatagattttgatggattcttggatggaatggattttgtgagactttt 48194850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 19893451 - 19893564
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| ||| |||||| ||||||||||| |||||||||| || ||| ||||||| ||  ||||||||||||| |||||||| ||||| |||||||    
T  19893451 gggtgtattgaattaagattttaagggattttaaaagactttttaatgataaaaaaatcttggagtattcaatcaaattttttatagaatattaataaat 19893550  T
Q  102 cttgtggtattcaa 115  Q
    ||  ||||||||||    
T  19893551 ctcatggtattcaa 19893564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 14555394 - 14555267
Alignment:
Q  3 ggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatc 102  Q
    ||||||||||||||  |||| || |||||||| ||||||||||||| ||| |||| |   |||||||||||||||   |||||||||||||||| |||      
T  14555394 ggtgtattggattgtaatttaaaaggattttaaaagacttttttataataaaaaagtttggtggtattcaatcaagacttttataaaatataaaaaaaat 14555295  T
Q  103 ttgtggtattcaattaggacaattatga 130  Q
    |||||||||||||||| |||||| ||||    
T  14555294 ttgtggtattcaattaagacaatcatga 14555267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 26882910 - 26882791
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| || || |||| || |||| |||||||||||  ||||||   ||| ||||  | |    
T  26882910 gggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtgttattcaatcaagatttttaaggaatgtaaaacatt 26882811  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||||||||||||||||||    
T  26882810 cttgtggtattcaattagga 26882791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 51826918 - 51826819
Alignment:
Q  4 gtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatct 103  Q
    |||||||| ||| |||||| ||||||||||| |||||||||| || ||| ||||||| ||||||||||||||||   |||||||||| ||||||||||||    
T  51826918 gtgtattgaattaagatttgaagggattttaaaagactttttaataataaaaaaatcttgtggtattcaatcaagacttttataaaacataaataaatct 51826819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 195
Target Start/End: Original strand, 43553536 - 43553729
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| ||| |||||||||| |||||||  |||| |||| || ||| |||| || |||||||| |||| ||   ||||||||||| |||||||||    
T  43553536 gggtgtattgaattaagatttcaagagattttaatagacattttcataataaaaaagtcttgtggtatacaattaagacttttataaaatttaaataaat 43553635  T
Q  102 cttgtggtattcaattaggacaattatgannnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtc 195  Q
    ||||| ||||||||||| |||||| | ||         || | ||| ||||||||| | ||||||||  |||||||||||||||||||| ||||    
T  43553636 cttgttgtattcaattacgacaatcaagacttcatttgaaggtaataaaatccgttagcattcaattgagatttctcacaacttataaattgtc 43553729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 52179772 - 52179652
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatctt 104  Q
    |||||||||| |||||||||| |||||||| || |  ||||||  ||| |||| ||  | |||||||||| ||   ||||||||||||||||||||||||    
T  52179772 tgtattggatcgagatttcaaaggattttaaaatagctttttagaataaaaaagtctagaggtattcaataaagacttttataaaatataaataaatctt 52179673  T
Q  105 gtggtattcaattaggacaat 125  Q
    |||||||||||||| ||||||    
T  52179672 gtggtattcaattaagacaat 52179652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 45318460 - 45318579
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| || || |||| || | ||||||||||||||  ||||||   ||| ||||  | |    
T  45318460 gggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttctggtattcaatcaagatttttaaggaatgtaaaacatt 45318559  T
Q  102 cttgtggtattcaattagga 121  Q
     |||||||||||||||||||    
T  45318560 attgtggtattcaattagga 45318579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 14229136 - 14229007
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttatta-tagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaa 100  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||||  || || |||| |   |||||||||||||||   |||||||||||| ||| |||    
T  14229136 gggtgtatttgattgtgatttcaagggattttaaaagactttttttatagtaaaaaagtttagtggtattcaatcaagacttttataaaatacaaagaaa 14229037  T
Q  101 tcttgtggtattcaattaggacaattatga 130  Q
    ||| |||||||| ||||| |||||| ||||    
T  14229036 tctcgtggtattgaattaagacaatcatga 14229007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 49230772 - 49230883
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa-actttttataaaatataaataaatct 103  Q
    |||||||||||  ||||| | ||||||||| |||||||||| |||||  |||| ||||||||||||||||||| |||||||  ||| || ||| || |||    
T  49230772 tgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaaatta-aaaaaagtct 49230870  T
Q  104 tgtggtattcaat 116  Q
    |||||||||||||    
T  49230871 tgtggtattcaat 49230883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 52705392 - 52705512
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaa 100  Q
    ||||||||||  |||||||||||||  ||||||| |||| |||||| || || |||| || ||||||||||||||||  ||||||   ||| ||||  |     
T  52705392 agggtgtattcaattgagatttcaaaagattttaaaagatttttttgttttataaaagtcttgtggtattcaatcaagatttttaaggaatgtaaaacat 52705491  T
Q  101 tcttgtggtattcaattagga 121  Q
    |||||||||||||||||||||    
T  52705492 tcttgtggtattcaattagga 52705512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 39757984 - 39758096
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatctt 104  Q
    ||||||| ||||||||||||| |||||||   | || ||||||| ||| ||||||| ||| ||||| ||||||   |||||| |||| || |||||||||    
T  39757984 tgtattgaattgagatttcaaaggattttgatatac-tttttatgataaaaaaatcttgtcgtattgaatcaagacttttattaaatctatataaatctt 39758082  T
Q  105 gtggtattcaatta 118  Q
    ||||||||||||||    
T  39758083 gtggtattcaatta 39758096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 39763338 - 39763450
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatctt 104  Q
    ||||||| ||||||||||||| |||||||   | || ||||||| ||| ||||||| ||| ||||| ||||||   |||||| |||| || |||||||||    
T  39763338 tgtattgaattgagatttcaaaggattttgatatac-tttttatgataaaaaaatcttgtcgtattgaatcaagacttttattaaatctatataaatctt 39763436  T
Q  105 gtggtattcaatta 118  Q
    ||||||||||||||    
T  39763437 gtggtattcaatta 39763450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 9191130 - 9191250
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaa 100  Q
    ||||||||||||||||||||||  |   |||||| ||||||||||  ||||||||||||| || | |||||||||||  |||| | | | || ||||||     
T  9191130 agggtgtattggattgagatttggaaaaattttaaaagactttttggttatagaaaaatcttgagttattcaatcaagattttaaaagattagaaataat 9191229  T
Q  101 tcttgtggtattcaattagga 121  Q
    ||  |||||||||||||||||    
T  9191230 tccggtggtattcaattagga 9191250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 39758120 - 39758231
Alignment:
Q  149 aaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagatt 248  Q
    ||||| ||||||||||||||| ||||||| | ||||||||||||||| || | |||| ||||  ||  ||||||| |||||||| |||  ||||| ||||    
T  39758120 aaatctgttggtattcaattaagatttctaagaacttataaaatgtcttttggtattgaaaatatg-cagattttaatggattcatttggggaatggatt 39758218  T
Q  249 ttgtgagactttt 261  Q
     ||||||||||||    
T  39758219 gtgtgagactttt 39758231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 39763474 - 39763585
Alignment:
Q  149 aaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagatt 248  Q
    ||||| ||||||||||||||| ||||||| | ||||||||||||||| || | |||| ||||  ||  ||||||| |||||||| |||  ||||| ||||    
T  39763474 aaatctgttggtattcaattaagatttctaagaacttataaaatgtcttttggtattgaaaatatg-cagattttaatggattcatttggggaatggatt 39763572  T
Q  249 ttgtgagactttt 261  Q
     ||||||||||||    
T  39763573 gtgtgagactttt 39763585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 10896800 - 10896919
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||  ||||||||||||| |||||||| |||| ||||||||| || |||| || |  |||||||||||||   |||||   ||| ||||  | |    
T  10896800 gggtgtattcaattgagatttcaaaggattttaaaagatttttttattttaaaaaagtctttaggtattcaatcaagacttttaaggaatctaaaacatt 10896899  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||||||||||||||||||    
T  10896900 cttgtggtattcaattagga 10896919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 36402247 - 36402366
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||  ||||||||||||| |||||||| ||||||||||| || || |||| || |  |||||||||||||   |||||   ||| ||||  | |    
T  36402247 gggtgtattcaattgagatttcaaaggattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagacttttaaggaatctaaaacatt 36402346  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||||||||||||||||||    
T  36402347 cttgtggtattcaattagga 36402366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9831298 - 9831375
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaa 78  Q
    ||||||||||  ||||||||||||| |||||||| ||||||||||| || || |||| || |  ||||||||||||||    
T  9831298 agggtgtattcaattgagatttcaaaggattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaaa 9831375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 14555244 - 14555135
Alignment:
Q  152 tccgttggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagattttg 251  Q
    ||||||| |||||||||  |||||||||  |||| |||| ||||  | | ||||||||| |  ||||||||||||| ||||||  || |||| |||||||    
T  14555244 tccgttgatattcaattgagatttctcatgacttgtaaattgtctcttggtattcaaaagtctatagattttgatgaattcttggattgaatggattttg 14555145  T
Q  252 tgagactttt 261  Q
    ||||||||||    
T  14555144 tgagactttt 14555135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 28039490 - 28039377
Alignment:
Q  3 ggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatc 102  Q
    ||||||||  |||||||||||| |||||| || |||| ||||| |  ||| |||  || || | |||||||| |||  ||||||||||||||||||||||    
T  28039490 ggtgtattcaattgagatttcatgggattataaaagaatttttaaaaataaaaaggtcttgagatattcaattaaaacttttataaaatataaataaatc 28039391  T
Q  103 ttgtggtattcaat 116  Q
    || |||| ||||||    
T  28039390 ttatggtgttcaat 28039377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 34772311 - 34772356
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagactttttta 47  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||    
T  34772311 gggtgtattggattgtgatttcaaaggattttaaaagactttttta 34772356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 25612043 - 25612115
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  ||||||| ||||||||||||||||    
T  25612043 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaa 25612115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 35679446 - 35679370
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||| ||   ||||| ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  35679446 agggtgtattgaatcatgattttaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaa 35679370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 953702 - 953777
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||   ||||  ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  953702 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 953777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 28824689 - 28824614
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||   ||||  ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  28824689 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 28824614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 4288998 - 4289056
Alignment:
Q  67 tattcaatcaaactttttataaaatataaataaatcttgtggtattcaattaggacaat 125  Q
    |||||||||||   ||||||| |||||||||||||| ||||||||||||| | ||||||    
T  4288998 tattcaatcaagacttttatagaatataaataaatcatgtggtattcaatcaagacaat 4289056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 45272473 - 45272542
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaat 74  Q
    ||||||||||| |||||  | ||||||||| |||||||||| |||||  ||||||  |||||||||||||    
T  45272473 tgtattggattaagattctatgggattttaaaagactttttaattatgaaaaaatattgtggtattcaat 45272542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 50192846 - 50192793
Alignment:
Q  24 aagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||| |||||| ||||||||||||||||  |||| || ||||||||||||||||    
T  50192846 aaggaattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaa 50192793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 4289149 - 4289193
Alignment:
Q  217 agattttgatggattcttttatggaatagattttgtgagactttt 261  Q
    ||||||| ||||||||||||||||| | |||||||||||| ||||    
T  4289149 agattttaatggattcttttatggagtggattttgtgagaatttt 4289193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 6312460 - 6312532
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  6312460 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 6312532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 9322814 - 9322742
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  9322814 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 9322742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 15835367 - 15835295
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  15835367 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 15835295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 33025395 - 33025471
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaa 78  Q
    |||||||||||||   ||||  ||| || |||| ||||||||||||| ||  ||||||| |||||||||||||||||    
T  33025395 gggtgtattggatcatgattctaagagaatttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaaa 33025471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 45760327 - 45760251
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaa 78  Q
    |||||||||||||   ||||  ||||||||||| |||| |||||||| ||  |||| || |||||||||||||||||    
T  45760327 gggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaaa 45760251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 11872 - 11621
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    ||||||||||||||  |||||| |||||||||| ||||||||||||||||| |||| || |||| |||||||||||   ||||||||||||||| |||||    
T  11872 gggtgtattggattcggatttctagggattttaaaagacttttttattataaaaaagtcttgtgatattcaatcaagacttttataaaatataagtaaat 11773  T
Q  102 cttgtggtattcaattaggacaattatgannnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttaga 201  Q
     || ||||||||||| |  ||  || | |        |||||||| | |||||||||||||||||||| ||||||||||||||||||||||||  || |     
T  11772 tttatggtattcaatcaaaacttttttta--------caatgcaacggaatccgttggtattcaattaagatttctcacaacttataaaatgtattttgg 11681  T
Q  202 tattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
    |||||||||||| || |||||||||||||||||||||||||| ||||||| |||||||||    
T  11680 tattcaaaaattaattgattttgatggattcttttatggaatggattttgagagactttt 11621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 3e-51; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 3634213 - 3634464
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    ||||||||||||||  |||||| |||||||||| ||||||||||||||||| |||| || |||| |||||||||||   ||||||||||||||| |||||    
T  3634213 gggtgtattggattcggatttctagggattttaaaagacttttttattataaaaaagtcttgtgatattcaatcaagacttttataaaatataagtaaat 3634312  T
Q  102 cttgtggtattcaattaggacaattatgannnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttaga 201  Q
     || ||||||||||| |  ||  || | |        |||||||| | |||||||||||||||||||| ||||||||||||||||||||||||  || |     
T  3634313 tttatggtattcaatcaaaacttttttta--------caatgcaacggaatccgttggtattcaattaagatttctcacaacttataaaatgtattttgg 3634404  T
Q  202 tattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
    |||||||||||| || |||||||||||||||||||||||||| ||||||| |||||||||    
T  3634405 tattcaaaaattaattgattttgatggattcttttatggaatggattttgagagactttt 3634464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 46037434 - 46037174
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| ||||||| || | ||||||||| ||||||||||||| ||  |||| |   ||| |||||||||||   ||||||||||| |||| ||||    
T  46037434 gggtgtattgaattgagaattaatgggattttaaaagacttttttataattaaaaagtttagtgatattcaatcaagacttttataaaatgtaaacaaat 46037335  T
Q  102 cttgtggtattcaattaggacaattatgannnnnnnnc-aatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttag 200  Q
    |||||| |||||||| | |||||| ||||          || ||||  ||||||||||||||||||||  |||||||||  |||||| || ||||  | |    
T  46037334 cttgtgatattcaatcaagacaatcatgactttttttttaaggcaacaaaatccgttggtattcaattgagatttctcatgacttatgaattgtctattg 46037235  T
Q  201 atattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
     ||||||||| |  ||||||||||||||||||||  ||||||| |||||||||||||||||    
T  46037234 gtattcaaaagtctatagattttgatggattcttggatggaatggattttgtgagactttt 46037174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 192
Target Start/End: Complemental strand, 9599145 - 9598958
Alignment:
Q  7 tattggattgagatttcaagggattttagaagactttttta-ttatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttg 105  Q
    |||||||||||||||| ||| ||||||| || ||||||||| ||||| |||| || ||| ||||||||||||   ||||||||||| |||||||||||||    
T  9599145 tattggattgagattttaagagattttaaaaaacttttttaattataaaaaagtcttgtagtattcaatcaagaattttataaaatttaaataaatcttg 9599046  T
Q  106 tggtattcaattaggacaattatga-nnnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaat 192  Q
    | ||||||||||| || ||| |  |         | |||||| |||||||||| ||| ||||||| ||||||||||||||||||||||    
T  9599045 ttgtattcaattaagataatcaaaactttgttttcgatgcaacgaaatccgttagtagtcaattatgatttctcacaacttataaaat 9598958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 192
Target Start/End: Complemental strand, 9826716 - 9826529
Alignment:
Q  7 tattggattgagatttcaagggattttagaagactttttta-ttatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttg 105  Q
    |||||||||||||||| ||| ||||||| || ||||||||| ||||| |||| || ||| ||||||||||||   ||||||||||| |||||||||||||    
T  9826716 tattggattgagattttaagagattttaaaaaacttttttaattataaaaaagtcttgtagtattcaatcaagaattttataaaatttaaataaatcttg 9826617  T
Q  106 tggtattcaattaggacaattatga-nnnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaat 192  Q
    | ||||||||||| || ||| |  |         | |||||| |||||||||| ||| ||||||| ||||||||||||||||||||||    
T  9826616 ttgtattcaattaagataatcaaaactttgttttcgatgcaacgaaatccgttagtagtcaattatgatttctcacaacttataaaat 9826529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 151858 - 151977
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| || || |||| || |||| |||||||||||  ||||||   ||| ||||  | |    
T  151858 gggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtgatattcaatcaagatttttaaggaatgtaaaacatt 151957  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||||||||||||||||||    
T  151958 cttgtggtattcaattagga 151977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 27418726 - 27418607
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||| || || |||| || ||||||||||||||||  ||||||   ||| ||||  | |    
T  27418726 gggtgtactggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaaggaatgtaaaacatt 27418627  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||||||||||||||||||    
T  27418626 cttgtggtattcaattagga 27418607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 35090174 - 35090071
Alignment:
Q  18 gatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgtggtattcaatt 117  Q
    ||||||||  ||||||| ||||||||||| || || |||| || ||||||||||||||||| ||||||   ||||||||  | |||||||||||||||||    
T  35090174 gatttcaatagattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaaaatttttaaggaatataaaacattcttgtggtattcaatt 35090075  T
Q  118 agga 121  Q
    ||||    
T  35090074 agga 35090071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 37042595 - 37042524
Alignment:
Q  54 aaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgtggtattcaattaggacaat 125  Q
    ||||||| ||||||||||||||||  |||||||||||| ||||| ||| |||||||||||||||| ||||||    
T  37042595 aaaaatcttgtggtattcaatcaagatttttataaaatctaaattaattttgtggtattcaattatgacaat 37042524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 47915141 - 47915022
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||||||||||||||||  |||||||| ||||||||||| || || |||| || ||||||||||||| ||  |||| |   ||| ||||  | |    
T  47915141 gggtgtattggattgagatttcataggattttaaaagacttttttgttttataaaagtcttgtggtattcaattaagattttgaaggaatgtaaaacatt 47915042  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||||||||||||||||||    
T  47915041 cttgtggtattcaattagga 47915022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 41060045 - 41060099
Alignment:
Q  62 tgtggtattcaatcaaactttttataaaatataaataaatcttgtggtattcaat 116  Q
    ||||||||||||||||  ||||||| |||||||||||||||||||||||||||||    
T  41060045 tgtggtattcaatcaagatttttattaaatataaataaatcttgtggtattcaat 41060099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 12253475 - 12253350
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| ||||||||||||| ||||||||  |||||||||||| | |  |||||| |  |||||| ||||||   ||||||  ||| |||||||||    
T  12253475 gggtgtattgaattgagatttcaaaggattttaatagacttttttatgaaaagaaaatctttaggtattgaatcaagacttttatggaatctaaataaat 12253376  T
Q  102 cttgtggtattcaattaggacaatta 127  Q
    ||| ||||||||||| | ||||||||    
T  12253375 cttatggtattcaatcaagacaatta 12253350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 26201644 - 26201532
Alignment:
Q  3 ggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatc 102  Q
    ||||||||| ||| |||||||||||||||||| |||||||||| ||  || ||| ||  ||||||||||| ||||   ||||||||||||||||||||||    
T  26201644 ggtgtattgaattaagatttcaagggatttta-aagactttttaatgctaaaaatatattgtggtattcattcaagacttttataaaatataaataaatc 26201546  T
Q  103 ttgtggtattcaat 116  Q
    |  ||| |||||||    
T  26201545 tcatgggattcaat 26201532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 34115554 - 34115441
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatctt 104  Q
    ||||||| ||| | |||||||  ||||||| |||||||||| || ||| ||||||| ||| ||||||||||||   ||||||  |||||||||||||||     
T  34115554 tgtattgaattaaaatttcaaatgattttaaaagactttttaatgataaaaaaatcttgtagtattcaatcaagacttttatggaatataaataaatctc 34115455  T
Q  105 gtggtattcaatta 118  Q
     |||||||||||||    
T  34115454 atggtattcaatta 34115441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 31494238 - 31494314
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||||| |||||  | |||||||| ||||||||||  ||||||||||||| || |||||||||||||    
T  31494238 agggtgtattggattgggatttggaaggattttaaaagactttttggttatagaaaaatcttgaggtattcaatcaa 31494314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 39783986 - 39784058
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||||||  | ||||||||| |||||||||| |||||  |||| |||||||||||||||||||    
T  39783986 tgtattggattgagattctatgggattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaa 39784058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 30110807 - 30110922
Alignment:
Q  6 gtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttg 105  Q
    |||||||||||||||||||| | |||||| ||||||||||| || || |||| || ||| ||||||||| ||  ||||||   ||| ||||  | |||||    
T  30110807 gtattggattgagatttcaaagaattttaaaagacttttttgttttataaaagtcttgtagtattcaattaagatttttaaggaatgtaaaacattcttg 30110906  T
Q  106 tggtattcaattagga 121  Q
    ||||||||||||||||    
T  30110907 tggtattcaattagga 30110922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 47031244 - 47031361
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaa 100  Q
    ||||||||||| |||| |||||  | |||||||| || |||||||  ||||||||||||| || | |||||||||||  |||| | ||| |||||||||     
T  47031244 agggtgtattgaattgggattttgaaggattttaaaaaactttttggttatagaaaaatcttgagatattcaatcaagattttaaaaaattataaataat 47031343  T
Q  101 tcttgtggtattcaatta 118  Q
    ||  ||||||||||||||    
T  47031344 tccggtggtattcaatta 47031361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 8116820 - 8116716
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    ||||||| ||||| || ||||  |||||||||| || | || ||||||||| || |||| |||| |||||||| |||  |||||| ||||||||||||||    
T  8116820 gggtgtaatggatggatatttttagggattttaaaatatttgtttattataaaagaatcttgtgatattcaattaaaacttttattaaatataaataaat 8116721  T
Q  102 cttgt 106  Q
    |||||    
T  8116720 cttgt 8116716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 261
Target Start/End: Complemental strand, 36355412 - 36355308
Alignment:
Q  157 tggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagattttgtgaga 256  Q
    ||||||| ||| | ||||| || ||||||| ||| ||||||| | |||||||||||  ||||||||| |||||||| || ||  ||| ||||||||||||    
T  36355412 tggtattaaatcaagatttttctcaacttaaaaattgtcctttgttattcaaaaatgtatagattttaatggattccttgatataatggattttgtgaga 36355313  T
Q  257 ctttt 261  Q
    |||||    
T  36355312 ctttt 36355308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 261
Target Start/End: Complemental strand, 42678121 - 42678017
Alignment:
Q  157 tggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagattttgtgaga 256  Q
    ||||||||||||| ||||| |  ||||||||||||||||  | | |||||||||||    ||||||| |||||||||||| | |||| |||||| |||||    
T  42678121 tggtattcaattaagatttgtaccaacttataaaatgtctattggtattcaaaaatctgcagattttaatggattcttttgtagaatggattttatgaga 42678022  T
Q  257 ctttt 261  Q
    |||||    
T  42678021 ctttt 42678017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 42678263 - 42678155
Alignment:
Q  17 agatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgtggtattcaat 116  Q
    |||||||||| ||||||| |||||||||| || ||| |||||||  ||| |||||||| ||   |||||| ||| ||||||||||||  |||||||||||    
T  42678263 agatttcaagagattttaaaagactttttaatgataaaaaaatctggtgatattcaattaagacttttatgaaacataaataaatctcatggtattcaat 42678164  T
Q  117 taggacaat 125  Q
     | ||||||    
T  42678163 caagacaat 42678155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 43057758 - 43057646
Alignment:
Q  9 ttggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgtgg 108  Q
    ||||||||||||||||| |||||||| ||||||||||| || || |||| || |||| ||||| || ||  ||||||   ||| ||||  | ||||||||    
T  43057758 ttggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtgttattctattaatatttttaaggaatgtaaaacattcttgtgg 43057659  T
Q  109 tattcaattagga 121  Q
    |||||||||||||    
T  43057658 tattcaattagga 43057646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 8078286 - 8078361
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||   ||||  ||||||||||| ||||||||||||| ||| |||| || ||||||||||||||||    
T  8078286 gggtgtattggatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaa 8078361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 30440687 - 30440762
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||   ||||  ||||||||||| ||||||||||||| ||  ||||||| ||||||||||||||||    
T  30440687 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaa 30440762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 37042508 - 37042458
Alignment:
Q  140 aatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaa 190  Q
    ||||||| |||||||| | ||||||||||| ||||||||||||||||||||    
T  37042508 aatgcaacgaaatccggtagtattcaattaagatttctcacaacttataaa 37042458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 37649778 - 37649666
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| ||| |||||||||| ||||||| |||||||||| || ||| |||| ||  |||||||||||| | |||||| ||| || |||| |||||    
T  37649778 gggtgtattgaattaagatttcaagagattttaaaagactttttaatgataaaaaattcg-gtggtattcaataagactttt-atagaacataagtaaat 37649681  T
Q  102 cttgtggtattcaat 116  Q
    ||  |||||||||||    
T  37649680 ctcatggtattcaat 37649666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 34695144 - 34695197
Alignment:
Q  24 aagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||| ||||||||||||||||  |||| || ||||||||||||||||    
T  34695144 aagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaa 34695197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 509585 - 509657
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||| | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  509585 tgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 509657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 261
Target Start/End: Complemental strand, 24939578 - 24939475
Alignment:
Q  157 tggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagattttgtgaga 256  Q
    |||||||||||||  |||| ||| |||||| |||  ||| || | |||||||||||| ||||||||| ||| |||  || || |||||||||||||||||    
T  24939578 tggtattcaattaaaatttttcataacttaaaaatagtctttgg-tattcaaaaatttatagattttaatgaatttcttaatagaatagattttgtgaga 24939480  T
Q  257 ctttt 261  Q
    |||||    
T  24939479 ctttt 24939475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 261
Target Start/End: Complemental strand, 34115401 - 34115297
Alignment:
Q  157 tggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagattttgtgaga 256  Q
    ||||||||||| | ||||| |  |||||||||||||||   ||| |||||||||||   |||||||| |||||||||||| |  | | ||||||||||||    
T  34115401 tggtattcaatcaagatttgtaccaacttataaaatgtttataggtattcaaaaatctgtagattttaatggattcttttgtatagtggattttgtgaga 34115302  T
Q  257 ctttt 261  Q
    |||||    
T  34115301 ctttt 34115297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 40097094 - 40097210
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||  ||||||||||||| |||||||| ||||||||||| || || |||| || |  |||||||||||||   |||||   ||| ||||  | |    
T  40097094 gggtgtattcaattgagatttcaaaggattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagacttttaaggaatctaaaacatt 40097193  T
Q  102 cttgtggtattcaatta 118  Q
    |||||||||||||||||    
T  40097194 cttgtggtattcaatta 40097210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 5572637 - 5572538
Alignment:
Q  3 ggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatc 102  Q
    ||||||||| |||||||||| || |||||||| ||  ||||||||| ||| |||  ||   || |||||||||||   ||||||||||||||||||||||    
T  5572637 ggtgtattgaattgagattttaatggattttaaaatgcttttttataataaaaacgtccattgatattcaatcaagacttttataaaatataaataaatc 5572538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 24939734 - 24939659
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatca 76  Q
    ||||||||||| |||| || ||| |  ||||||| ||||||||||  ||||||||||||| || ||||||||||||    
T  24939734 agggtgtattgcattgggagttcgaaagattttaaaagactttttggttatagaaaaatcttgaggtattcaatca 24939659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 44343712 - 44343637
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||   ||||  ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  44343712 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 44343637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 12253327 - 12253281
Alignment:
Q  149 aaatccgttggtattcaattaggatttctcacaacttataaaatgtc 195  Q
    ||||| ||||||||||||||| ||||||| | |||||||||||||||    
T  12253327 aaatctgttggtattcaattaagatttctaagaacttataaaatgtc 12253281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 46202569 - 46202519
Alignment:
Q  66 gtattcaatcaaactttttataaaatataaataaatcttgtggtattcaat 116  Q
    ||||||||||||  |||||||| |||| |||||||| ||||||||||||||    
T  46202569 gtattcaatcaagatttttatagaataaaaataaattttgtggtattcaat 46202519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 10676672 - 10676619
Alignment:
Q  24 aagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||| |||||||||| |||||  ||||||| ||||||||| ||||||    
T  10676672 aagggattttaaaagactttttaattatgaaaaaatcttgtggtatttaatcaa 10676619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 18915029 - 18914976
Alignment:
Q  24 aagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  18915029 aagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 18914976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 31638792 - 31638841
Alignment:
Q  28 gattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||| ||||||||||||| ||  |||| |||||||||||||||||||    
T  31638792 gattttaaaagacttttttatcatgaaaaagtcatgtggtattcaatcaa 31638841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 7993029 - 7993101
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||| |||||  |  |||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  7993029 tgtattggattaagattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 7993101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 15913469 - 15913381
Alignment:
Q  28 gattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgtggtattcaat 116  Q
    ||||||| |||||||||| || ||| ||| ||| | || |||||||||||   ||||||| |||||||||||||||  ||| |||||||    
T  15913469 gattttaaaagactttttgataataaaaacatcttatgatattcaatcaagacttttatagaatataaataaatctcatggcattcaat 15913381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 125
Target Start/End: Original strand, 21067021 - 21067057
Alignment:
Q  89 aatataaataaatcttgtggtattcaattaggacaat 125  Q
    |||||||||||||||||||||||||||| | ||||||    
T  21067021 aatataaataaatcttgtggtattcaatcaagacaat 21067057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 28342234 - 28342306
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  28342234 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 28342306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 33474669 - 33474781
Alignment:
Q  149 aaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagatt 248  Q
    |||| |||||||||||||||| ||||||| | |||||||||||| || |  | |||| |||| | ||  |||||| || ||||| ||| || ||| ||||    
T  33474669 aaattcgttggtattcaattaagatttctaagaacttataaaatatcttgtggtattgaaaattagacggattttaattgattcatttgtgtaatggatt 33474768  T
Q  249 ttgtgagactttt 261  Q
     ||||||||||||    
T  33474769 gtgtgagactttt 33474781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 37327814 - 37327886
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||| ||||| |||||  | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  37327814 tgtataggattaagattcaatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 37327886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 39027984 - 39028095
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa-actttttataaaatataaataaatct 103  Q
    |||||||||||  ||||| |  | |||||| |||||||||| |||||  |||| || |||||||||||||||| |||||||  ||  || ||| ||||||    
T  39027984 tgtattggattaggattttatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaactta-aaaaaaatct 39028082  T
Q  104 tgtggtattcaat 116  Q
    |||||||||||||    
T  39028083 tgtggtattcaat 39028095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 41827201 - 41827273
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||   |||| | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  41827201 tgtattggattagaattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 41827273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 43057872 - 43057840
Alignment:
Q  2 gggtgtattggattgagatttcaagggatttta 34  Q
    |||||||||||||||||||||||| ||||||||    
T  43057872 gggtgtattggattgagatttcaaaggatttta 43057840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 46405720 - 46405672
Alignment:
Q  29 attttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||| |||||||||| |||||  |||| |||||||||||||||||||    
T  46405720 attttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaa 46405672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 2e-42; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 261
Target Start/End: Original strand, 24317972 - 24318176
Alignment:
Q  63 gtggtattcaatcaaactttttataaaatataaataaatcttgtggtattcaattaggacaattatgannnnnnnn--caatgcaatgaaatccgttggt 160  Q
    |||||||||||||||   ||||||| ||||||||| |||||||||||| ||||||| | |||| | ||          |||||||| |||||||||||||    
T  24317972 gtggtattcaatcaagacttttatataatataaattaatcttgtggtactcaattaaggcaatcaagacattttttttcaatgcaacgaaatccgttggt 24318071  T
Q  161 -attcaa---ttaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagattttgtgaga 256  Q
     ||||||   ||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24318072 cattcaaaaattaggatttctcacaacttataaaatgtctttcggtattcaaaaattgatagattttgatggattcttttatggaatggattttgtgaga 24318171  T
Q  257 ctttt 261  Q
    |||||    
T  24318172 ctttt 24318176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 17790436 - 17790561
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| || |||  |||||  |||||||||||||||    |||||||||||||||  ||||    
T  17790436 gggtgtattggattgagatttcaagagattttaaaagactttttgatgataataaaattttgtggtattcaatcatgacttttataaaatataacaaaat 17790535  T
Q  102 cttgtggtattcaattaggacaatta 127  Q
    ||||||||||||||||| || |||||    
T  17790536 cttgtggtattcaattaagataatta 17790561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 2112790 - 2112910
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaa 100  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||| || || |||| || ||||||||||||||||  ||||||   ||| ||||  |     
T  2112790 agggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaaggaatgtaaaacat 2112889  T
Q  101 tcttgtggtattcaattagga 121  Q
    |||||||||||||||||||||    
T  2112890 tcttgtggtattcaattagga 2112910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 14061546 - 14061669
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| |||| ||||| | || |||||| ||||||||||||   || |||| || ||||||||||||||||  |||||||| |||||||||||||    
T  14061546 gggtgtattgtattgggattttatggaattttaaaagacttttttaaagtaaaaaagtcttgtggtattcaatcaagatttttatagaatataaataaat 14061645  T
Q  102 cttgtggtattcaattaggacaat 125  Q
    ||||||||||||||| | ||||||    
T  14061646 cttgtggtattcaatcaagacaat 14061669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 1606097 - 1605981
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| || || |||| || ||||||||||||||||  ||||||   ||| ||||  | |    
T  1606097 gggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaaggaatgtaaaacatt 1605998  T
Q  102 cttgtggtattcaatta 118  Q
    |||||||||||||||||    
T  1605997 cttgtggtattcaatta 1605981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 42366050 - 42366302
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    ||||||||||||||| |||||||| | |||||| |||| |||||||| ||| |||| |   ||||||||||||||||  ||||||||||| | |||||||    
T  42366050 gggtgtattggattgtgatttcaaagcattttaaaagatttttttatgataaaaaagtttggtggtattcaatcaaaacttttataaaatctgaataaat 42366149  T
Q  102 cttgtggtattcaattaggacaattatgannnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttaga 201  Q
    | ||||||||||||| | |||  || |           ||| || |||||| |||||||||||| ||  |||||||   |||||||||||||||  | |     
T  42366150 catgtggtattcaatcaagactttttt-------tttaaatacattgaaattcgttggtattcatttgagatttctaggaacttataaaatgtctcttgg 42366242  T
Q  202 tattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
    |||| |||| | || ||||||| |||||||| ||| ||||||||||| ||||||||||||    
T  42366243 tattgaaaattagacagattttaatggattcatttgtggaatagattgtgtgagactttt 42366302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 42274972 - 42275091
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||||||||||||||||| |||||||| |||| |||||| || || |||| || ||||||||||||||||  ||||||   ||| ||||  | |    
T  42274972 gggtgtattggattgagatttcaaaggattttaaaagatttttttgttttataaaagtcttgtggtattcaatcaagatttttaaggaatgtaaaacatt 42275071  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||||||||||||||||||    
T  42275072 cttgtggtattcaattagga 42275091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 43605444 - 43605329
Alignment:
Q  6 gtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttg 105  Q
    |||||||||||||||||||| |||||||| ||||||||||| || || |||| || ||||||||||||||||  ||||||   ||| ||||  | |||||    
T  43605444 gtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaaggaatgtaaaacattcttg 43605345  T
Q  106 tggtattcaattagga 121  Q
    ||||||||||||||||    
T  43605344 tggtattcaattagga 43605329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 28619842 - 28619962
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaa 100  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||| || || |||| |  ||||||||||||| ||  ||||||   ||| ||||  |     
T  28619842 agggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagttttgtggtattcaattaagatttttaaggaatgtaaaacat 28619941  T
Q  101 tcttgtggtattcaattagga 121  Q
    |||||||||||||||||||||    
T  28619942 tcttgtggtattcaattagga 28619962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 10802855 - 10802736
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| |||||||||||||   |||||| |||||||||||||| || |||| || | ||||||||||||||  |||||| ||||| ||||  | |    
T  10802855 gggtgtattgaattgagatttcaaataattttaaaagacttttttattttataaaagtcttctggtattcaatcaagatttttaaaaaatgtaaaacatt 10802756  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||| ||||||||||||||    
T  10802755 cttgtagtattcaattagga 10802736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 29260360 - 29260241
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    ||||||||||||||||||||| || |||||||| ||||||||||| || || |||| || ||||||||||||||||  ||||||   ||| ||||  | |    
T  29260360 gggtgtattggattgagattttaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaaggaatgtaaaacatt 29260261  T
Q  102 cttgtggtattcaattagga 121  Q
    |||||| |||||||||||||    
T  29260260 cttgtgatattcaattagga 29260241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 35142042 - 35142161
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    ||||||||||||||||||||| || |||||||| ||||||||||  || || |||| || ||||||||||||||||| ||||||   ||| ||||  | |    
T  35142042 gggtgtattggattgagattttaatggattttaaaagactttttcgttttaaaaaagtcttgtggtattcaatcaaaatttttaaggaatgtaaaacatt 35142141  T
Q  102 cttgtggtattcaattagga 121  Q
     |||||||||||||||||||    
T  35142142 tttgtggtattcaattagga 35142161  T

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Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 40265365 - 40265246
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||||||||| ||||||| |||||||| ||||||||||| || || |||| || |||| |||||||||||  ||||||   ||| ||||  | |    
T  40265365 gggtgtattggattgaaatttcaaaggattttaaaagacttttttgttttataaaagtcttgtgatattcaatcaagatttttaaggaatgtaaaacatt 40265266  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||||||||||||||||||    
T  40265265 cttgtggtattcaattagga 40265246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 43488906 - 43489166
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| ||||| ||||||| ||||||||  |||||||||||| | |  |||||| || |||||| ||||||   ||||||  ||| |||||||||    
T  43488906 gggtgtattgaattgaaatttcaaaggattttaatagacttttttatgaaaagaaaatcttgaggtattgaatcaagacttttatggaatctaaataaat 43489005  T
Q  102 cttgtggtattcaattaggacaattatga-nnnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttag 200  Q
    ||||| ||||||||| | |||||||| ||         |||  ||   ||||||||||||||||||||| ||||||| | |||||||||||||||    |    
T  43489006 cttgtagtattcaatcaagacaattaagacttttttttcaagacatcaaaatccgttggtattcaattaagatttctaagaacttataaaatgtctcgtg 43489105  T
Q  201 atattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
     |||| |||| | ||  |||||| |||||||| ||| || ||| |||| ||||||||||||    
T  43489106 gtattgaaaattagacggattttaatggattcatttgtgtaatggattgtgtgagactttt 43489166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 7148050 - 7148121
Alignment:
Q  6 gtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||||||||| |||||||| ||||||||||| || || |||| || ||||||||||||||||    
T  7148050 gtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaa 7148121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 24296737 - 24296625
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaa 100  Q
    ||||||||||| |||| |||||| |  ||||||| ||||||||||  ||||||||||||| || ||||||||||||   |||| | | | ||||||||||    
T  24296737 agggtgtattgaattgggatttcgaaagattttaaaagactttttggttatagaaaaatcttgaggtattcaatcatgattttaaaagattataaataaa 24296638  T
Q  101 tcttgtggtattc 113  Q
    ||| |||||||||    
T  24296637 tctggtggtattc 24296625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 4655047 - 4655166
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||||||||||||||||| | |||||| |||| |||||| ||  | |||| || ||||||||| ||||||  ||||||   ||| ||||  | |    
T  4655047 gggtgtattggattgagatttcaaagaattttaaaagatttttttgtttaataaaagtcttgtggtatttaatcaagatttttaaggaatgtaaaacatt 4655146  T
Q  102 cttgtggtattcaattagga 121  Q
    ||||||||||||||||||||    
T  4655147 cttgtggtattcaattagga 4655166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 9457543 - 9457618
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||| |||||||||||||| |||||||| ||||| ||||| || || |||| || ||||||||||||||||    
T  9457543 gggtgtattcgattgagatttcaaaggattttaaaagacatttttgttttataaaagtcttgtggtattcaatcaa 9457618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 42937249 - 42937325
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||||||   ||||| ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  42937249 agggtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 42937325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 125
Target Start/End: Original strand, 10127528 - 10127649
Alignment:
Q  3 ggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatc 102  Q
    |||||||| ||||||||||| ||| ||||||| |||||||||| | ||||  |||||| |||| |||||||||     |||||| ||||||||  |||||    
T  10127528 ggtgtattagattgagattttaagagattttaaaagactttttga-tataataaaatcttgtgctattcaatcttgacttttatgaaatataacaaaatc 10127626  T
Q  103 ttgtggtattcaattaggacaat 125  Q
    || ||||||||||| | ||||||    
T  10127627 ttttggtattcaatcaagacaat 10127649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 7507216 - 7507140
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||||||   ||||  ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  7507216 agggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 7507140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 41386955 - 41386879
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaaga-cttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||||||||||||||||  ||||||| ||||  |||||| || || |||| || ||||||||||||||||    
T  41386955 gggtgtattggattgagatttcaaaagattttaaaagattttttttgttttataaaagtcttgtggtattcaatcaa 41386879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 23115484 - 23115409
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||   ||||  ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  23115484 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 23115409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 24214907 - 24214832
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||   ||||  || |||||||| ||||||||||||| ||| |||| || ||||||||||||||||    
T  24214907 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaa 24214832  T

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Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 42735593 - 42735518
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||   ||||  ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  42735593 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 42735518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 14724011 - 14723961
Alignment:
Q  27 ggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||| ||||||||||| ||||||||||||| ||  ||||||||||||    
T  14724011 ggattttaaaagacttttttgttatagaaaaatcttgaagtattcaatcaa 14723961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 24296537 - 24296476
Alignment:
Q  200 gatattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
    |||||||||||||  ||||||||| |||||||||||  | |||| |||||||| ||||||||    
T  24296537 gatattcaaaaatgtatagattttaatggattctttggtagaatggattttgtaagactttt 24296476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 26373717 - 26373770
Alignment:
Q  24 aagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  26373717 aagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 26373770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 41478989 - 41479062
Alignment:
Q  4 gtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||   ||||  ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  41478989 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 41479062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 43166961 - 43166889
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaa-tcatgtggtattcaatcaa 77  Q
    ||||||||||| |||||| | ||||||||| || ||||||| |||| ||||||| || ||||||||||||||||    
T  43166961 tgtattggattaagattttatgggattttaaaatactttttaatta-agaaaaagtcttgtggtattcaatcaa 43166889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 9209036 - 9209080
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagactttttt 46  Q
    |||||||||| ||||||||||||| | |||||| |||||||||||    
T  9209036 gggtgtattgaattgagatttcaaagaattttaaaagactttttt 9209080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 14782448 - 14782376
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  14782448 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 14782376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 30382758 - 30382714
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagactttttt 46  Q
    |||||||||  ||||||||||||| |||||||| |||||||||||    
T  30382758 gggtgtattcaattgagatttcaaaggattttaaaagactttttt 30382714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 32497376 - 32497487
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa-actttttataaaatataaataaatct 103  Q
    |||||||||||  ||||  | ||||||||| |||||||||| || ||  |||| || |||||||||||||||| |||||||| ||  || ||| || |||    
T  32497376 tgtattggattaggattctatgggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaagactttttacaactta-aaaaaagtct 32497474  T
Q  104 tgtggtattcaat 116  Q
    |||||||||||||    
T  32497475 tgtggtattcaat 32497487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 38806937 - 38806849
Alignment:
Q  28 gattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgtggtattcaat 116  Q
    |||||||||||||||||   ||||| ||||||| || |||||||||||||  |||| | | | || |||||| ||| ||||||||||||    
T  38806937 gattttagaagacttttaagttataaaaaaatcttgaggtattcaatcaagattttaacagattagaaataagtctggtggtattcaat 38806849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 40013554 - 40013510
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagactttttt 46  Q
    ||||||||||||| |||||||||| | |||||| |||||||||||    
T  40013554 gggtgtattggatggagatttcaaagaattttaaaagactttttt 40013510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 42938434 - 42938358
Alignment:
Q  1 agggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||| |||||||||   |||| ||||||||||| ||||||||||||  ||  |||| || ||||||||||||||||    
T  42938434 agggtttattggattataattttaagggattttaaaagacttttttaccatgaaaaagtcttgtggtattcaatcaa 42938358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 44726123 - 44726051
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  44726123 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 44726051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 261
Target Start/End: Original strand, 7100164 - 7100424
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||||  ||  |||| ||  |||||||||||||||   ||||||||||| |||| ||||    
T  7100164 gggtgtattgaattgggatttcaagggattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagacttttataaaatctaaacaaat 7100263  T
Q  102 cttgtggtattcaattaggacaattatga-nnnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttag 200  Q
    ||||||||||||||| | |||||| ||||          || ||||  ||||||||||||||||||||  |||||||||  |||||| || ||||| | |    
T  7100264 cttgtggtattcaatcaagacaatcatgactttttttttaaggcaacaaaatccgttggtattcaattgagatttctcatgacttatgaattgtccattg 7100363  T
Q  201 atattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
     ||||||||| |  ||||||||||||||||||||  ||||||| |||||||||||||||||    
T  7100364 gtattcaaaagtctatagattttgatggattcttggatggaatggattttgtgagactttt 7100424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 8794466 - 8794206
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||||  ||  |||| ||  |||||||||||||||   ||||||||||| |||| ||||    
T  8794466 gggtgtattgaattgggatttcaagggattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagacttttataaaatctaaacaaat 8794367  T
Q  102 cttgtggtattcaattaggacaattatga-nnnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttag 200  Q
    ||||||||||||||| | |||||| ||||          || ||||  ||||||||||||||||||||  |||||||||  |||||| || ||||| | |    
T  8794366 cttgtggtattcaatcaagacaatcatgactttttttttaaggcaacaaaatccgttggtattcaattgagatttctcatgacttatgaattgtccattg 8794267  T
Q  201 atattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
     ||||||||| |  ||||||||||||||||||||  ||||||| |||||||||||||||||    
T  8794266 gtattcaaaagtctatagattttgatggattcttggatggaatggattttgtgagactttt 8794206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 708931 - 709174
Alignment:
Q  18 gatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaatcttgtggtattcaatt 117  Q
    ||||||||||||||||| ||||||||||||| ||  |||||||  ||||||||||||||||  ||||||||||| ||||||||||||||||||||||||     
T  708931 gatttcaagggattttaaaagacttttttataatgaaaaaatctagtggtattcaatcaaaacttttataaaatgtaaataaatcttgtggtattcaatc 709030  T
Q  118 aggacaattatgannnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgata 217  Q
    | |||||| ||||          | ||||  ||||||||||||||||||||   ||||||||  |||||| || ||||  | | ||||||||| |  |||    
T  709031 aagacaatcatgacttttttttgaggcaacaaaatccgttggtattcaattgaaatttctcatgacttatgaattgtctattggtattcaaaagtctata 709130  T
Q  218 gattttgatggattcttttatggaatagattttgtgagactttt 261  Q
    |||||||||||||||||  ||| ||| |||||||||||||||||    
T  709131 gattttgatggattcttggatgtaatggattttgtgagactttt 709174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 5957126 - 5957254
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||| ||| |||| ||  |||||||||||||||   ||||||||||| |||| ||||    
T  5957126 gggtgtattgaattgagaattcaagggattttaaaagacttttttataataaaaaagtctagtggtattcaatcaagacttttataaaatgtaaacaaat 5957225  T
Q  102 cttgtggtattcaattaggacaattatga 130  Q
    ||||||||||||||||| |||||| ||||    
T  5957226 cttgtggtattcaattaagacaatcatga 5957254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 31609776 - 31609675
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| ||  || |||||| |||||||| |||||||||| |||||| ||||||| ||||||||||||||||   ||||||| |||||||||||||    
T  31609776 gggtgtattgaatgaagttttcaatggattttaaaagactttttaattataaaaaaatcttgtggtattcaatcaagacttttatagaatataaataaat 31609677  T
Q  102 ct 103  Q
    ||    
T  31609676 ct 31609675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 29834369 - 29834294
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||| |||||||||||||| |||||||| ||||| ||||| || || |||| || ||||||||||||||||    
T  29834369 gggtgtattcgattgagatttcaaaggattttaaaagacatttttgttttataaaagtcttgtggtattcaatcaa 29834294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 29865803 - 29865728
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||| |||||||||||||| |||||||| ||||| ||||| || || |||| || ||||||||||||||||    
T  29865803 gggtgtattcgattgagatttcaaaggattttaaaagacatttttgttttataaaagtcttgtggtattcaatcaa 29865728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 3110369 - 3110252
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||||||| |||||||||   |||||| ||||||||||| || || ||||||| | ||||||||||||| | ||||||   ||| ||||  | |    
T  3110369 gggtgtattggattcagatttcaaaatattttaaaagacttttttgttttataaaaatcttatggtattcaatcataatttttaaggaatgtaaaacatt 3110270  T
Q  102 cttgtggtattcaattag 119  Q
     |||||||||||||||||    
T  3110269 tttgtggtattcaattag 3110252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 4653377 - 4653421
Alignment:
Q  81 ttttataaaatataaataaatcttgtggtattcaattaggacaat 125  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||    
T  4653377 ttttataaaatgtaaataaatcttgtggtattcaattaagacaat 4653421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 11007670 - 11007622
Alignment:
Q  139 caatgcaatgaaatccgttggtattcaattaggatttctcacaacttat 187  Q
    |||||||| |||||| ||||||||||||||||||||||||||| |||||    
T  11007670 caatgcaacgaaatctgttggtattcaattaggatttctcacagcttat 11007622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 6476797 - 6476678
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||||||||| ||||||| |||||||| |||||| |||| || || |||| || ||  ||||||||| ||  ||||||  |||| ||||  | |    
T  6476797 gggtgtattggattgaaatttcaatggattttaaaagactgttttgttttataaaagtcttgcagtattcaattaagatttttaagaaatgtaaaacatt 6476698  T
Q  102 cttgtggtattcaattagga 121  Q
     |||||||||||||||||||    
T  6476697 tttgtggtattcaattagga 6476678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 10009653 - 10009608
Alignment:
Q  71 caatcaaactttttataaaatataaataaatcttgtggtattcaat 116  Q
    |||||||  |||||||| ||||||||||||||||||||||||||||    
T  10009653 caatcaagatttttatagaatataaataaatcttgtggtattcaat 10009608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 11007762 - 11007698
Alignment:
Q  6 gtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtatt 70  Q
    ||||||||||||||||||||  ||||||| |||||||||| | |||| |||| || |||||||||    
T  11007762 gtattggattgagatttcaaaagattttaaaagactttttaaatataaaaaagtcttgtggtatt 11007698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 14262746 - 14262674
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  ||||||| ||||||||||||||||    
T  14262746 tgtattggattaggattctacgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaa 14262674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 261
Target Start/End: Original strand, 35164960 - 35165064
Alignment:
Q  157 tggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagattttgtgaga 256  Q
    ||||||| ||| | ||||| || ||||||| ||| | ||||| | |||||||||||  ||||||||| ||| |||| || ||  ||||||||||||||||    
T  35164960 tggtattaaatcaagatttttctcaacttaaaaattatcctttgttattcaaaaatatatagattttaatgaattccttaatataatagattttgtgaga 35165059  T
Q  257 ctttt 261  Q
    |||||    
T  35165060 ctttt 35165064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 2301054 - 2300979
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||||   ||||  ||||||||||| ||||||||||||| ||  |||| || ||||||||||||||||    
T  2301054 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 2300979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 30877852 - 30877927
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||  ||||||||||||| |||||||| ||||||||||| || || |||| || |  |||||||||||||    
T  30877852 gggtgtattcaattgagatttcaaaggattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaa 30877927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 10009582 - 10009464
Alignment:
Q  143 gcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaa 242  Q
    |||| |||||| | |||||||||  || ||||| ||  ||||||||||||||| || | || |||||| |   |||||||| || ||||||||| |||||    
T  10009582 gcaacgaaatctggtggtattcagataagatttttcctaacttataaaatgtcttttggtagtcaaaagtatttagattttaatagattcttttgtggaa 10009483  T
Q  243 tagattttgtgagactttt 261  Q
    |  ||||||||||||||||    
T  10009482 tgaattttgtgagactttt 10009464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 5957277 - 5957389
Alignment:
Q  149 aaatccgttggtattcaattaggatttctcacaacttataaaatgtccttagatattcaaaaattgatagattttgatggattcttttatggaatagatt 248  Q
    ||||||||||||||||||||| |||||||||  |||||| || ||||  | | ||||||||| |  ||||||||| ||  ||| |||  |  ||| ||||    
T  5957277 aaatccgttggtattcaattaagatttctcatgacttatgaattgtctattggtattcaaaagtctatagattttaatatattttttcgtataatggatt 5957376  T
Q  249 ttgtgagactttt 261  Q
    |||||||||||||    
T  5957377 ttgtgagactttt 5957389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 31895588 - 31895660
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  31895588 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 31895660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 34773301 - 34773373
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  34773301 tgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 34773373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 81866 - 81747
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    ||||||||||||||||||||| || |||||||| ||||||||||| || || |||| || ||||||||||||||||  ||||||   ||| ||||  | |    
T  81866 gggtgtattggattgagattttaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaaggaatctaaaacatt 81767  T
Q  102 cttgtggtattcaattagga 121  Q
    |||||| |||||||||||||    
T  81766 cttgtgctattcaattagga 81747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 261
Target Start/End: Complemental strand, 1969 - 1709
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaaactttttataaaatataaataaat 101  Q
    |||||||||| ||  |||||| ||| ||||||| |||||||||| || ||| ||||||   |||||||||||| ||  ||||||| ||| ||||||||||    
T  1969 gggtgtattgaatcaagattttaagagattttaaaagactttttaataataaaaaaatttggtggtattcaattaagatttttatgaaacataaataaat 1870  T
Q  102 cttgtggtattcaattaggacaattatga-nnnnnnnncaatgcaatgaaatccgttggtattcaattaggatttctcacaacttataaaatgtccttag 200  Q
    ||| | ||||||||| | |||||| |  |          |  ||||  ||||||  ||||||||||||| ||||| |  ||||||||||||||||  | |    
T  1869 cttatagtattcaatcaagacaatcaaaactttttattgagggcaaccaaatcccatggtattcaattaagatttgtaccaacttataaaatgtctattg 1770  T
Q  201 atattcaaaaattgatagattttgatggattcttttatggaatagattttgtgagactttt 261  Q
     |||||||||||    ||||||| |||||||||||| | |||| |||||||||||||||||    
T  1769 gtattcaaaaatctgcagattttaatggattcttttgtagaatggattttgtgagactttt 1709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 21497 - 21422
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    ||||||||| |||||||||||||| |||||||| ||||| ||||| || || |||| || ||||||||||||||||    
T  21497 gggtgtattcgattgagatttcaaaggattttaaaagacatttttgttttataaaagtcttgtggtattcaatcaa 21422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 58348 - 58276
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  |||| || ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  58348 tgtattggattaggattccatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 58276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 756 - 828
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  756 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaattcttgtggtattcaatcaa 828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 10453 - 10525
Alignment:
Q  5 tgtattggattgagatttcaagggattttagaagacttttttattatagaaaaatcatgtggtattcaatcaa 77  Q
    |||||||||||  ||||  | ||||||||| |||||||||| |||||  |||| || ||||||||||||||||    
T  10453 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaa 10525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 34886 - 34842
Alignment:
Q  2 gggtgtattggattgagatttcaagggattttagaagactttttt 46  Q
    ||||||||||||||||||||| || |||||||| || ||||||||    
T  34886 gggtgtattggattgagattttaaaggattttaaaatactttttt 34842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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