View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12680_low_30 (Length: 250)

Name: NF12680_low_30
Description: NF12680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12680_low_30
NF12680_low_30
[»] chr1 (2 HSPs)
chr1 (1-225)||(646104-646343)
chr1 (46-82)||(47053379-47053415)
[»] chr4 (9 HSPs)
chr4 (24-83)||(2635110-2635169)
chr4 (24-83)||(22683810-22683869)
chr4 (24-82)||(25318994-25319052)
chr4 (24-82)||(33560651-33560709)
chr4 (24-82)||(35065010-35065068)
chr4 (32-82)||(32818450-32818500)
chr4 (20-81)||(9134553-9134614)
chr4 (24-80)||(26617709-26617765)
chr4 (22-78)||(33347254-33347310)
[»] chr3 (4 HSPs)
chr3 (31-82)||(50321838-50321889)
chr3 (24-82)||(54596765-54596823)
chr3 (24-82)||(7717453-7717511)
chr3 (24-82)||(48410892-48410950)
[»] chr8 (3 HSPs)
chr8 (24-82)||(42455859-42455917)
chr8 (24-71)||(5997374-5997421)
chr8 (35-82)||(37684363-37684410)
[»] chr6 (7 HSPs)
chr6 (24-82)||(26280552-26280610)
chr6 (24-82)||(35098538-35098596)
chr6 (35-82)||(2234294-2234341)
chr6 (24-78)||(6654174-6654228)
chr6 (24-78)||(7952793-7952847)
chr6 (33-78)||(2008586-2008631)
chr6 (24-60)||(2002567-2002603)
[»] chr7 (3 HSPs)
chr7 (24-73)||(12306924-12306973)
chr7 (24-82)||(5489926-5489984)
chr7 (24-82)||(45004967-45005025)
[»] chr2 (6 HSPs)
chr2 (18-74)||(7630357-7630413)
chr2 (34-82)||(31453340-31453388)
chr2 (30-78)||(32777923-32777971)
chr2 (21-82)||(680357-680418)
chr2 (24-60)||(10280684-10280720)
chr2 (24-60)||(15928536-15928572)
[»] scaffold0168 (1 HSPs)
scaffold0168 (24-83)||(31773-31832)
[»] chr5 (3 HSPs)
chr5 (31-82)||(27374371-27374422)
chr5 (24-82)||(29922841-29922899)
chr5 (24-60)||(370812-370848)


Alignment Details
Target: chr1 (Bit Score: 146; Significance: 5e-77; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 646104 - 646343
Alignment:
Q  1 gtttggttccaaagtggccatatttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaattgattacgagtgaagctataatt 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  646104 gtttggttccaaagtggtcatatttgattatgacatgtttggttgtttttgagtagaattgattttgcctccagaattgattatgagtgaagctataatt 646203  T
Q  101 tatatagctgtatttaaacacaaacc----------------cactttagtcggaatcaattatcgcaaaatcaattattgtca-cgcaaaaccaaacat 183  Q
      ||||||||||||||||||||||||                ||||||||||  ||||||||||| |||||||||||||||||| |||||||||||||||    
T  646204 --tatagctgtatttaaacacaaacccactttacctttaactcactttagtcaaaatcaattatctcaaaatcaattattgtcaccgcaaaaccaaacat 646301  T
Q  184 ttgtgtatatgtgtatttctttactttgattttgatagttgc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  646302 ttgtgtatatgtgtatttctttactttgattttgatagttgc 646343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 47053379 - 47053415
Alignment:
Q  46 tttttgagtagaatttattttgcctccagaattgatt 82  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  47053379 ttttttagtagaattgattttgcctccagaattgatt 47053415  T

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Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 2635110 - 2635169
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaattgatta 83  Q
    |||||| ||||||||||| ||| |||| ||||||| | ||||||||||||||||||||||    
T  2635110 ttgattttgacatgtttgattgcttttaagtagaactgattttgcctccagaattgatta 2635169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 22683810 - 22683869
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaattgatta 83  Q
    |||||| ||||||||| | ||||||||||||| |||| ||||||||||||||||| ||||    
T  22683810 ttgattttgacatgttggtttgtttttgagtaaaattgattttgcctccagaattaatta 22683869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 25318994 - 25319052
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaattgatt 82  Q
    |||||| ||||||||||||||| | | |||||||||| |||||| ||||||||||||||    
T  25318994 ttgattttgacatgtttggttgctctcgagtagaattgattttgtctccagaattgatt 25319052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 33560709 - 33560651
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaattgatt 82  Q
    |||||| ||||||||||||||| | | |||||||||| |||||||||| ||||||||||    
T  33560709 ttgattttgacatgtttggttgctctcgagtagaattgattttgcctctagaattgatt 33560651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 35065010 - 35065068
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaattgatt 82  Q
    ||||||||||||| |||||||| ||| |||||||||| |||||||||| | ||||||||    
T  35065010 ttgattatgacatttttggttgctttcgagtagaattgattttgcctcaataattgatt 35065068  T

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Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 32818500 - 32818450
Alignment:
Q  32 gacatgtttggttgtttttgagtagaatttattttgcctccagaattgatt 82  Q
    ||||| |||||||  ||| |||||||||| |||||||||||||||||||||    
T  32818500 gacatatttggtttctttcgagtagaattgattttgcctccagaattgatt 32818450  T

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Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 9134553 - 9134614
Alignment:
Q  20 atatttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaattgat 81  Q
    |||||||||| |||||||||| |||||| | |||| ||||| ||||| | ||||||||||||    
T  9134553 atatttgattttgacatgtttagttgttatcgagtggaattgattttacttccagaattgat 9134614  T

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Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 26617765 - 26617709
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaattga 80  Q
    |||||| |||||||||||| || |||| | ||||||| |||||||||||| ||||||    
T  26617765 ttgattttgacatgtttggatgcttttcaatagaattgattttgcctccataattga 26617709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 33347310 - 33347254
Alignment:
Q  22 atttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaatt 78  Q
    ||||||||||||||| |||||| | ||||||||| || | |||||||||| ||||||    
T  33347310 atttgattatgacatatttggtggcttttgagtataagtaattttgcctctagaatt 33347254  T

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Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 50321889 - 50321838
Alignment:
Q  31 tgacatgtttggttgtttttgagtagaatttattttgcctccagaattgatt 82  Q
    |||||||||||||||||||| ||||||||| |||||| ||| ||||||||||    
T  50321889 tgacatgtttggttgttttttagtagaattaattttgtctcaagaattgatt 50321838  T

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Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 54596765 - 54596823
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaattgatt 82  Q
    ||||||||||||||||||||||||||  ||||||||| ||| |||||||| || |||||    
T  54596765 ttgattatgacatgtttggttgttttcaagtagaattgattctgcctccaaaaatgatt 54596823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 7717511 - 7717453
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaattgatt 82  Q
    |||||| ||||||||||||||  |   |||||||||| |||||||||||||||||||||    
T  7717511 ttgattttgacatgtttggttcctccagagtagaattgattttgcctccagaattgatt 7717453  T

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Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 48410950 - 48410892
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaattgatt 82  Q
    |||||| ||| ||||||| ||| ||| |||||||||| |||||||||||| ||||||||    
T  48410950 ttgattctgagatgtttgattgctttcgagtagaattgattttgcctccaaaattgatt 48410892  T

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Target: chr8 (Bit Score: 35; Significance: 0.00000000009; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 42455859 - 42455917
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaattgatt 82  Q
    |||||| ||||||||||||||| |||||||||| ||| ||| |||||||| ||||||||    
T  42455859 ttgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgatt 42455917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 5997421 - 5997374
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatttattttgcctc 71  Q
    |||||| |||||||||||| |||||||||||| |||| ||||||||||    
T  5997421 ttgattttgacatgtttggatgtttttgagtaaaattgattttgcctc 5997374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 37684363 - 37684410
Alignment:
Q  35 atgtttggttgtttttgagtagaatttattttgcctccagaattgatt 82  Q
    ||||||||||||| | |||||||||| |||||| ||||||||||||||    
T  37684363 atgtttggttgttgtggagtagaattgattttgtctccagaattgatt 37684410  T

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Target: chr6 (Bit Score: 35; Significance: 0.00000000009; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 26280552 - 26280610
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaattgatt 82  Q
    |||||| ||||||||||| ||||||||  |||||||| |||||||||| ||||||||||    
T  26280552 ttgattttgacatgtttgattgttttttggtagaattgattttgcctcaagaattgatt 26280610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 35098596 - 35098538
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaattgatt 82  Q
    |||||| ||||||||||||||  |||||||||||||| ||||||| ||||| |||||||    
T  35098596 ttgattttgacatgtttggttacttttgagtagaattgattttgcttccaggattgatt 35098538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 2234341 - 2234294
Alignment:
Q  35 atgtttggttgtttttgagtagaatttattttgcctccagaattgatt 82  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||||    
T  2234341 atgtttggttgctcttgagtagaattgattttgcctcctgaattgatt 2234294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 6654228 - 6654174
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaatt 78  Q
    ||||||||| |||||||||||| | |||||||||||| ||||| ||| |||||||    
T  6654228 ttgattatgtcatgtttggttgctattgagtagaattgatttttccttcagaatt 6654174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 7952847 - 7952793
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaatt 78  Q
    |||||||||||||||||| ||| |||||||| || || |||||||||||| ||||    
T  7952847 ttgattatgacatgtttgattggttttgagttgatttaattttgcctccaaaatt 7952793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 2008631 - 2008586
Alignment:
Q  33 acatgtttggttgtttttgagtagaatttattttgcctccagaatt 78  Q
    ||||||||||||| |||  ||||||||| |||||||||||||||||    
T  2008631 acatgtttggttgctttctagtagaattgattttgcctccagaatt 2008586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 2002603 - 2002567
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatt 60  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  2002603 ttgattttgacatgtttggttgttttcgagtagaatt 2002567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 12306924 - 12306973
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatttattttgcctcca 73  Q
    |||||| ||||||||||||||| | |||||||||||| ||||||||||||    
T  12306924 ttgattttgacatgtttggttgctcttgagtagaattgattttgcctcca 12306973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 5489984 - 5489926
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaattgatt 82  Q
    |||||| | ||||||||||||| |  ||||||||||| |||||||||||| ||||||||    
T  5489984 ttgattcttacatgtttggttgctcctgagtagaattaattttgcctccaaaattgatt 5489926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 45004967 - 45005025
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaattgatt 82  Q
    |||||| ||||||||||||||| | | || ||||||| ||||||||| |||||||||||    
T  45004967 ttgattttgacatgtttggttgctctcgaatagaattgattttgccttcagaattgatt 45005025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 7630357 - 7630413
Alignment:
Q  18 ccatatttgattatgacatgtttggttgtttttgagtagaatttattttgcctccag 74  Q
    ||||| |||||| ||||||||||||||| |||  ||||||||| |||||||||||||    
T  7630357 ccataattgattttgacatgtttggttgctttcaagtagaattgattttgcctccag 7630413  T

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Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 31453340 - 31453388
Alignment:
Q  34 catgtttggttgtttttgagtagaatttattttgcctccagaattgatt 82  Q
    |||||||||||| | ||||||||||||||||||||||| | ||||||||    
T  31453340 catgtttggttgatgttgagtagaatttattttgcctctataattgatt 31453388  T

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Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 32777923 - 32777971
Alignment:
Q  30 atgacatgtttggttgtttttgagtagaatttattttgcctccagaatt 78  Q
    |||||||||||||||||||| | |||||||| |||||||||||| ||||    
T  32777923 atgacatgtttggttgttttcgtgtagaattgattttgcctccataatt 32777971  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 680418 - 680357
Alignment:
Q  21 tatttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaattgatt 82  Q
    ||||| ||| |||||||||| |||| ||| || ||||| | |||||||||||||||||||||    
T  680418 tattttattttgacatgtttagttgctttcgaatagaactgattttgcctccagaattgatt 680357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 10280684 - 10280720
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatt 60  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  10280684 ttgattatgacatgttttgttgtttttgaatagaatt 10280720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 15928572 - 15928536
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatt 60  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  15928572 ttgattttgacatgtttggttgttgttgagtagaatt 15928536  T

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Target: scaffold0168 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 31773 - 31832
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaattgatta 83  Q
    |||||| ||||||||||||||||| | ||||| |||| ||| |||||||| |||||||||    
T  31773 ttgattctgacatgtttggttgttgtcgagtaaaattgattctgcctccaaaattgatta 31832  T

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Target: chr5 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 27374422 - 27374371
Alignment:
Q  31 tgacatgtttggttgtttttgagtagaatttattttgcctccagaattgatt 82  Q
    |||||||||||||||||||  ||||||||| |||||||||  ||||||||||    
T  27374422 tgacatgtttggttgttttcaagtagaattaattttgccttaagaattgatt 27374371  T

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Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 29922841 - 29922899
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatttattttgcctccagaattgatt 82  Q
    |||||| ||||||||||||||||| | ||| |||||| |||||| ||| ||||||||||    
T  29922841 ttgattttgacatgtttggttgttctcgagcagaattgattttgtctcaagaattgatt 29922899  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 370848 - 370812
Alignment:
Q  24 ttgattatgacatgtttggttgtttttgagtagaatt 60  Q
    |||||||||| |||||||||||||||| |||||||||    
T  370848 ttgattatgatatgtttggttgtttttaagtagaatt 370812  T

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