View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12681_high_2 (Length: 297)

Name: NF12681_high_2
Description: NF12681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12681_high_2
NF12681_high_2
[»] chr7 (78 HSPs)
chr7 (1-279)||(35452418-35452695)
chr7 (42-228)||(43573430-43573614)
chr7 (47-231)||(34757362-34757542)
chr7 (40-229)||(44184444-44184631)
chr7 (42-193)||(7817672-7817820)
chr7 (37-229)||(41893914-41894104)
chr7 (47-152)||(42926214-42926319)
chr7 (47-229)||(13162918-13163098)
chr7 (47-229)||(39231620-39231800)
chr7 (47-216)||(4713585-4713753)
chr7 (40-193)||(11352859-11353010)
chr7 (42-231)||(41458593-41458780)
chr7 (47-227)||(3343222-3343400)
chr7 (58-152)||(8920569-8920663)
chr7 (50-152)||(46532577-46532679)
chr7 (40-227)||(19785964-19786149)
chr7 (85-228)||(39331985-39332127)
chr7 (42-232)||(28036740-28036928)
chr7 (85-229)||(46829478-46829622)
chr7 (69-229)||(13729725-13729884)
chr7 (51-238)||(33180606-33180791)
chr7 (162-231)||(37899218-37899287)
chr7 (43-229)||(41402506-41402691)
chr7 (83-225)||(43482527-43482667)
chr7 (47-232)||(37808656-37808839)
chr7 (85-189)||(3293168-3293271)
chr7 (86-229)||(21559797-21559939)
chr7 (41-228)||(32815168-32815353)
chr7 (162-231)||(37899320-37899389)
chr7 (47-228)||(10055524-10055703)
chr7 (42-152)||(12645797-12645906)
chr7 (162-232)||(44495102-44495172)
chr7 (46-193)||(3062365-3062510)
chr7 (127-229)||(12007156-12007258)
chr7 (41-228)||(21023003-21023188)
chr7 (47-152)||(42555639-42555743)
chr7 (43-229)||(21822487-21822671)
chr7 (40-152)||(26041205-26041315)
chr7 (44-152)||(35588780-35588887)
chr7 (47-228)||(47494971-47495150)
chr7 (47-228)||(29162868-29163047)
chr7 (162-229)||(35586778-35586845)
chr7 (162-229)||(47448825-47448892)
chr7 (162-231)||(13152590-13152658)
chr7 (47-152)||(25067298-25067402)
chr7 (85-228)||(31844534-31844675)
chr7 (128-234)||(42584796-42584902)
chr7 (48-208)||(1471183-1471342)
chr7 (165-229)||(46773650-46773714)
chr7 (41-229)||(38779630-38779817)
chr7 (162-232)||(2008863-2008933)
chr7 (49-227)||(27163554-27163729)
chr7 (162-200)||(34978324-34978362)
chr7 (86-225)||(11564896-11565033)
chr7 (51-225)||(13906353-13906525)
chr7 (162-227)||(29002609-29002674)
chr7 (163-228)||(32777713-32777778)
chr7 (162-198)||(6269396-6269432)
chr7 (71-229)||(16980296-16980452)
chr7 (86-230)||(18111540-18111685)
chr7 (162-230)||(19426578-19426645)
chr7 (162-198)||(44496808-44496844)
chr7 (172-231)||(8904422-8904481)
chr7 (173-228)||(8920865-8920920)
chr7 (40-193)||(47078137-47078287)
chr7 (172-230)||(6109993-6110051)
chr7 (162-196)||(29723932-29723966)
chr7 (162-228)||(30941386-30941451)
chr7 (162-228)||(33050183-33050248)
chr7 (86-152)||(37666770-37666836)
chr7 (162-228)||(39823809-39823875)
chr7 (162-228)||(40842405-40842470)
chr7 (162-232)||(41018659-41018729)
chr7 (166-228)||(43159584-43159646)
chr7 (172-229)||(35822990-35823047)
chr7 (162-198)||(5174557-5174593)
chr7 (162-198)||(21204359-21204395)
chr7 (162-230)||(43079638-43079705)
[»] chr3 (103 HSPs)
chr3 (42-228)||(37927091-37927276)
chr3 (47-227)||(20080074-20080252)
chr3 (56-228)||(50638251-50638420)
chr3 (47-232)||(24095298-24095481)
chr3 (41-228)||(55399999-55400184)
chr3 (40-228)||(3953360-3953546)
chr3 (41-228)||(49363137-49363322)
chr3 (43-229)||(21196123-21196307)
chr3 (40-229)||(10206858-10207045)
chr3 (47-227)||(39697114-39697292)
chr3 (41-228)||(24482849-24483034)
chr3 (47-230)||(44677376-44677557)
chr3 (42-229)||(46019461-46019646)
chr3 (40-152)||(51465799-51465910)
chr3 (39-225)||(21195775-21195959)
chr3 (40-231)||(50206855-50207044)
chr3 (42-152)||(26672473-26672580)
chr3 (47-229)||(37508390-37508570)
chr3 (47-193)||(49761342-49761486)
chr3 (41-229)||(6999168-6999355)
chr3 (47-229)||(32767675-32767855)
chr3 (86-232)||(42683823-42683968)
chr3 (162-230)||(43904971-43905039)
chr3 (46-231)||(8846488-8846672)
chr3 (49-228)||(29573249-29573427)
chr3 (40-229)||(49417574-49417760)
chr3 (41-229)||(54773639-54773826)
chr3 (162-232)||(8821626-8821696)
chr3 (42-152)||(9158759-9158869)
chr3 (86-225)||(31376696-31376833)
chr3 (86-229)||(54694043-54694185)
chr3 (86-228)||(34057883-34058024)
chr3 (41-229)||(39670983-39671170)
chr3 (47-232)||(46852024-46852206)
chr3 (89-225)||(49167753-49167888)
chr3 (40-110)||(30862958-30863027)
chr3 (162-231)||(10811132-10811201)
chr3 (41-150)||(37410952-37411060)
chr3 (47-152)||(52937258-52937362)
chr3 (47-229)||(11633612-11633792)
chr3 (127-200)||(42358609-42358682)
chr3 (162-229)||(26996315-26996382)
chr3 (161-232)||(27718790-27718861)
chr3 (49-152)||(33795618-33795721)
chr3 (47-152)||(46253697-46253799)
chr3 (86-228)||(3347057-3347193)
chr3 (42-152)||(24645431-24645540)
chr3 (48-149)||(29633965-29634065)
chr3 (167-228)||(30863086-30863147)
chr3 (47-152)||(36412198-36412303)
chr3 (47-193)||(3281608-3281752)
chr3 (165-229)||(33796265-33796329)
chr3 (40-152)||(36121896-36122007)
chr3 (162-229)||(33374491-33374558)
chr3 (47-228)||(46982795-46982973)
chr3 (162-229)||(48405409-48405476)
chr3 (166-229)||(49983360-49983423)
chr3 (162-228)||(14207263-14207329)
chr3 (162-228)||(14215011-14215077)
chr3 (162-232)||(36671020-36671089)
chr3 (40-150)||(55013079-55013188)
chr3 (87-152)||(16675457-16675522)
chr3 (173-230)||(30909027-30909084)
chr3 (52-226)||(18741119-18741290)
chr3 (165-229)||(27168690-27168754)
chr3 (172-232)||(42888981-42889041)
chr3 (127-228)||(48352996-48353097)
chr3 (47-229)||(51973260-51973439)
chr3 (127-228)||(52714733-52714834)
chr3 (162-229)||(108430-108496)
chr3 (162-229)||(16479631-16479697)
chr3 (47-228)||(22371191-22371370)
chr3 (166-229)||(31350615-31350678)
chr3 (41-148)||(35201426-35201531)
chr3 (162-229)||(37894248-37894315)
chr3 (162-237)||(38926619-38926693)
chr3 (162-229)||(53932397-53932463)
chr3 (162-228)||(4494242-4494308)
chr3 (162-228)||(11327108-11327173)
chr3 (162-228)||(26014812-26014877)
chr3 (162-228)||(33375860-33375926)
chr3 (162-196)||(38671649-38671683)
chr3 (162-228)||(45054974-45055040)
chr3 (47-150)||(48893420-48893525)
chr3 (162-231)||(7294105-7294174)
chr3 (172-229)||(9862532-9862589)
chr3 (162-239)||(26550226-26550303)
chr3 (162-198)||(5244258-5244294)
chr3 (162-198)||(29917029-29917065)
chr3 (162-198)||(29966182-29966218)
chr3 (162-230)||(32981127-32981194)
chr3 (166-198)||(33389038-33389070)
chr3 (165-229)||(34456789-34456853)
chr3 (165-229)||(35376560-35376623)
chr3 (162-198)||(35597191-35597227)
chr3 (40-152)||(41281606-41281717)
chr3 (162-198)||(41505520-41505556)
chr3 (162-198)||(44413926-44413962)
chr3 (162-198)||(44813163-44813199)
chr3 (162-198)||(45186557-45186593)
chr3 (162-198)||(45293034-45293070)
chr3 (162-230)||(48152291-48152359)
chr3 (165-228)||(53718049-53718110)
[»] chr2 (105 HSPs)
chr2 (41-228)||(18876806-18876993)
chr2 (47-229)||(2220992-2221172)
chr2 (42-229)||(4061849-4062031)
chr2 (41-228)||(15269861-15270046)
chr2 (86-228)||(18723594-18723735)
chr2 (39-228)||(6998952-6999139)
chr2 (41-189)||(42678788-42678935)
chr2 (41-229)||(9634322-9634508)
chr2 (42-193)||(5054643-5054792)
chr2 (41-228)||(28245728-28245912)
chr2 (47-229)||(39449266-39449446)
chr2 (83-228)||(6895895-6896038)
chr2 (47-227)||(13347706-13347885)
chr2 (42-215)||(29361033-29361204)
chr2 (40-225)||(32869829-32870012)
chr2 (41-189)||(42372518-42372665)
chr2 (40-228)||(6170630-6170816)
chr2 (47-229)||(28679315-28679495)
chr2 (47-229)||(7648391-7648569)
chr2 (39-228)||(13765400-13765587)
chr2 (47-230)||(18176938-18177119)
chr2 (73-193)||(40936981-40937100)
chr2 (47-225)||(2563707-2563883)
chr2 (41-229)||(670358-670539)
chr2 (40-193)||(23352792-23352941)
chr2 (42-227)||(433851-434034)
chr2 (85-229)||(29711978-29712120)
chr2 (47-225)||(37105644-37105817)
chr2 (54-229)||(5200125-5200297)
chr2 (47-225)||(22525888-22526062)
chr2 (71-230)||(35589302-35589460)
chr2 (86-229)||(36802895-36803037)
chr2 (93-228)||(44711926-44712060)
chr2 (87-229)||(2841833-2841974)
chr2 (40-152)||(17898118-17898230)
chr2 (41-152)||(7574510-7574620)
chr2 (51-228)||(25881544-25881719)
chr2 (54-230)||(12498536-12498709)
chr2 (47-226)||(35705496-35705672)
chr2 (47-152)||(36211952-36212056)
chr2 (51-228)||(20911801-20911977)
chr2 (86-227)||(26206848-26206989)
chr2 (43-226)||(14233606-14233788)
chr2 (163-229)||(30977888-30977954)
chr2 (41-150)||(24562903-24563011)
chr2 (119-230)||(39449080-39449190)
chr2 (40-124)||(3012737-3012820)
chr2 (162-225)||(9194432-9194495)
chr2 (51-229)||(30546255-30546441)
chr2 (162-228)||(8427552-8427618)
chr2 (48-150)||(11091252-11091353)
chr2 (49-229)||(11384908-11385086)
chr2 (162-228)||(22888827-22888892)
chr2 (122-229)||(44050014-44050121)
chr2 (162-227)||(4384056-4384120)
chr2 (86-228)||(12889762-12889903)
chr2 (164-229)||(29684619-29684684)
chr2 (47-193)||(10711759-10711903)
chr2 (172-228)||(37257449-37257505)
chr2 (162-237)||(6511242-6511316)
chr2 (160-227)||(7502431-7502498)
chr2 (49-152)||(9377531-9377633)
chr2 (85-152)||(26277170-26277237)
chr2 (40-228)||(29051540-29051724)
chr2 (84-193)||(42866785-42866893)
chr2 (175-230)||(43666697-43666752)
chr2 (85-228)||(4753160-4753302)
chr2 (162-240)||(18254215-18254292)
chr2 (162-228)||(36587474-36587539)
chr2 (162-236)||(44484662-44484735)
chr2 (42-225)||(34119539-34119720)
chr2 (47-100)||(41910856-41910909)
chr2 (161-229)||(5031922-5031990)
chr2 (119-229)||(43513411-43513520)
chr2 (47-150)||(4758531-4758633)
chr2 (162-229)||(14871846-14871913)
chr2 (162-229)||(18737879-18737946)
chr2 (162-229)||(34144557-34144623)
chr2 (162-229)||(35171232-35171298)
chr2 (47-110)||(36643976-36644038)
chr2 (162-229)||(38821365-38821432)
chr2 (189-232)||(42223975-42224018)
chr2 (162-237)||(43057055-43057130)
chr2 (166-229)||(44254598-44254661)
chr2 (163-229)||(14876956-14877022)
chr2 (162-228)||(31922298-31922364)
chr2 (162-228)||(34431832-34431898)
chr2 (175-229)||(36517195-36517249)
chr2 (47-207)||(39213662-39213820)
chr2 (162-196)||(40210073-40210107)
chr2 (165-226)||(16799674-16799735)
chr2 (41-78)||(26277232-26277269)
chr2 (172-229)||(27490746-27490802)
chr2 (162-195)||(37003643-37003676)
chr2 (39-108)||(40504345-40504414)
chr2 (116-152)||(4299283-4299319)
chr2 (165-229)||(6336251-6336315)
chr2 (41-109)||(7552675-7552742)
chr2 (162-198)||(9194270-9194306)
chr2 (162-198)||(9207619-9207655)
chr2 (162-194)||(9760051-9760083)
chr2 (164-228)||(12784406-12784470)
chr2 (86-150)||(33780325-33780389)
chr2 (162-230)||(36909849-36909916)
chr2 (162-230)||(41042252-41042319)
[»] chr6 (55 HSPs)
chr6 (49-228)||(2688958-2689135)
chr6 (41-229)||(32459402-32459589)
chr6 (42-230)||(18141188-18141374)
chr6 (41-228)||(35213447-35213632)
chr6 (41-228)||(23628360-23628547)
chr6 (47-223)||(13143274-13143448)
chr6 (42-230)||(30036681-30036867)
chr6 (41-228)||(754324-754509)
chr6 (39-237)||(6531064-6531263)
chr6 (40-193)||(5028151-5028302)
chr6 (46-231)||(20822760-20822942)
chr6 (47-152)||(1369435-1369539)
chr6 (41-229)||(5327477-5327664)
chr6 (42-231)||(11547416-11547603)
chr6 (40-229)||(26832645-26832832)
chr6 (45-229)||(2075341-2075523)
chr6 (42-230)||(30152417-30152603)
chr6 (33-237)||(3198951-3199152)
chr6 (95-229)||(24842367-24842499)
chr6 (103-228)||(34036979-34037102)
chr6 (42-230)||(3610848-3611034)
chr6 (46-230)||(32046696-32046878)
chr6 (119-229)||(33421759-33421868)
chr6 (47-207)||(14986636-14986795)
chr6 (49-150)||(6856057-6856158)
chr6 (69-229)||(15318101-15318260)
chr6 (162-231)||(4820248-4820317)
chr6 (47-152)||(28041705-28041810)
chr6 (162-229)||(2242027-2242094)
chr6 (41-229)||(2777203-2777388)
chr6 (83-152)||(14693179-14693248)
chr6 (83-152)||(14699591-14699660)
chr6 (83-229)||(17551306-17551451)
chr6 (40-152)||(9050208-9050320)
chr6 (162-229)||(15368828-15368895)
chr6 (162-229)||(33651019-33651086)
chr6 (162-216)||(13422980-13423034)
chr6 (127-229)||(8505744-8505846)
chr6 (89-228)||(28944912-28945050)
chr6 (127-200)||(8645336-8645409)
chr6 (48-152)||(31749440-31749543)
chr6 (162-229)||(3339505-3339571)
chr6 (165-228)||(8747169-8747232)
chr6 (162-229)||(13658831-13658898)
chr6 (162-228)||(11635540-11635606)
chr6 (164-198)||(14817961-14817995)
chr6 (162-228)||(25811844-25811909)
chr6 (162-228)||(25995442-25995507)
chr6 (162-196)||(28630130-28630164)
chr6 (162-228)||(33712320-33712386)
chr6 (162-228)||(34047387-34047452)
chr6 (162-227)||(5570339-5570403)
chr6 (47-152)||(34504095-34504199)
chr6 (162-222)||(29459107-29459167)
chr6 (161-193)||(34570599-34570631)
[»] chr8 (91 HSPs)
chr8 (39-229)||(29440406-29440594)
chr8 (41-235)||(9208059-9208250)
chr8 (46-229)||(4994380-4994562)
chr8 (47-228)||(2732988-2733167)
chr8 (47-230)||(38234005-38234190)
chr8 (45-228)||(38708184-38708367)
chr8 (39-230)||(16966783-16966972)
chr8 (42-188)||(28646711-28646857)
chr8 (42-188)||(28651295-28651441)
chr8 (41-228)||(1633776-1633961)
chr8 (41-228)||(16872042-16872227)
chr8 (52-229)||(41600308-41600482)
chr8 (47-231)||(31596945-31597127)
chr8 (42-229)||(6991694-6991880)
chr8 (55-152)||(35031397-35031493)
chr8 (85-228)||(45529175-45529317)
chr8 (47-193)||(30439398-30439542)
chr8 (86-228)||(34718115-34718256)
chr8 (41-152)||(36885374-36885484)
chr8 (162-231)||(3946237-3946306)
chr8 (47-229)||(1871507-1871686)
chr8 (95-229)||(12783765-12783897)
chr8 (87-229)||(41159820-41159961)
chr8 (42-152)||(42569616-42569725)
chr8 (47-210)||(7955899-7956060)
chr8 (41-232)||(32843828-32844015)
chr8 (51-152)||(36424497-36424598)
chr8 (47-230)||(36531593-36531773)
chr8 (86-228)||(16613634-16613775)
chr8 (86-228)||(29991412-29991552)
chr8 (40-229)||(36110137-36110324)
chr8 (47-216)||(37783863-37784030)
chr8 (40-228)||(7478780-7478965)
chr8 (41-151)||(34591340-34591449)
chr8 (162-231)||(9549204-9549273)
chr8 (41-228)||(11017805-11017990)
chr8 (40-210)||(32847571-32847740)
chr8 (47-206)||(37597260-37597417)
chr8 (47-228)||(7592849-7593029)
chr8 (47-228)||(14707235-14707415)
chr8 (47-229)||(35564288-35564468)
chr8 (104-229)||(4658211-4658335)
chr8 (69-230)||(8645163-8645322)
chr8 (115-228)||(13971125-13971236)
chr8 (42-228)||(12707149-12707334)
chr8 (115-229)||(5277663-5277776)
chr8 (127-228)||(5600957-5601058)
chr8 (127-228)||(5639562-5639663)
chr8 (47-135)||(5864285-5864372)
chr8 (48-228)||(10644694-10644873)
chr8 (127-228)||(25987757-25987858)
chr8 (164-228)||(36426027-36426091)
chr8 (162-229)||(27630896-27630962)
chr8 (162-229)||(33100474-33100541)
chr8 (162-229)||(33589235-33589302)
chr8 (85-152)||(39543452-39543519)
chr8 (162-229)||(41520967-41521034)
chr8 (162-228)||(7598708-7598774)
chr8 (162-228)||(18651370-18651436)
chr8 (162-228)||(26026896-26026962)
chr8 (86-152)||(39453337-39453403)
chr8 (46-193)||(7472918-7473062)
chr8 (172-229)||(28772139-28772196)
chr8 (47-152)||(42110074-42110179)
chr8 (162-227)||(44061718-44061783)
chr8 (43-228)||(12734899-12735083)
chr8 (165-229)||(13970918-13970982)
chr8 (41-230)||(30135900-30136088)
chr8 (162-229)||(1068605-1068672)
chr8 (162-229)||(5864202-5864269)
chr8 (161-228)||(9314411-9314477)
chr8 (162-229)||(12045659-12045725)
chr8 (43-227)||(16327039-16327222)
chr8 (87-150)||(29028892-29028955)
chr8 (165-232)||(30927940-30928006)
chr8 (162-201)||(33958114-33958153)
chr8 (162-229)||(35067159-35067226)
chr8 (162-225)||(44064360-44064423)
chr8 (127-198)||(6440111-6440182)
chr8 (162-228)||(25830251-25830317)
chr8 (162-228)||(27325758-27325823)
chr8 (162-228)||(32174954-32175019)
chr8 (162-200)||(33451568-33451606)
chr8 (69-193)||(41541892-41542015)
chr8 (162-232)||(42443100-42443169)
chr8 (162-228)||(42786665-42786731)
chr8 (172-229)||(5771891-5771948)
chr8 (47-152)||(22706132-22706237)
chr8 (183-228)||(41659376-41659421)
chr8 (162-198)||(7777185-7777221)
chr8 (163-227)||(40528749-40528813)
[»] chr4 (113 HSPs)
chr4 (41-232)||(9362564-9362753)
chr4 (42-229)||(22819648-22819833)
chr4 (51-228)||(33860647-33860822)
chr4 (42-226)||(38715251-38715432)
chr4 (43-193)||(28657329-28657477)
chr4 (47-231)||(46405866-46406048)
chr4 (42-152)||(53647311-53647421)
chr4 (41-230)||(39344866-39345053)
chr4 (86-228)||(21617183-21617324)
chr4 (47-230)||(30079844-30080025)
chr4 (42-229)||(41486030-41486215)
chr4 (47-152)||(42667280-42667385)
chr4 (41-199)||(38338808-38338964)
chr4 (41-229)||(5932044-5932229)
chr4 (40-150)||(56271437-56271546)
chr4 (86-229)||(13086021-13086163)
chr4 (35-233)||(9118744-9118940)
chr4 (39-228)||(18882859-18883046)
chr4 (85-229)||(37514060-37514204)
chr4 (42-229)||(40609609-40609799)
chr4 (40-232)||(624196-624387)
chr4 (86-230)||(28458307-28458451)
chr4 (49-229)||(32696180-32696358)
chr4 (47-149)||(39312507-39312609)
chr4 (41-228)||(1815887-1816071)
chr4 (38-193)||(31657681-31657834)
chr4 (47-229)||(6141670-6141850)
chr4 (47-228)||(13139148-13139326)
chr4 (85-230)||(36111324-36111469)
chr4 (47-193)||(43769746-43769890)
chr4 (41-230)||(31076052-31076238)
chr4 (86-229)||(2999111-2999253)
chr4 (164-229)||(4915680-4915745)
chr4 (46-189)||(4949545-4949686)
chr4 (48-229)||(42815403-42815583)
chr4 (40-193)||(12138887-12139039)
chr4 (47-228)||(13389342-13389523)
chr4 (47-228)||(14451393-14451572)
chr4 (40-228)||(439145-439331)
chr4 (38-229)||(2256214-2256402)
chr4 (162-227)||(2401611-2401676)
chr4 (42-229)||(14010005-14010190)
chr4 (48-229)||(21025600-21025780)
chr4 (127-225)||(38519796-38519894)
chr4 (127-229)||(51255745-51255847)
chr4 (86-228)||(32546288-32546428)
chr4 (43-151)||(33899214-33899321)
chr4 (86-228)||(51887663-51887804)
chr4 (42-225)||(12112633-12112811)
chr4 (42-229)||(42959270-42959456)
chr4 (86-152)||(49768248-49768314)
chr4 (41-229)||(54669470-54669655)
chr4 (51-228)||(3078803-3078979)
chr4 (172-229)||(6494908-6494965)
chr4 (47-152)||(17475952-17476055)
chr4 (40-125)||(17683443-17683527)
chr4 (119-230)||(45851758-45851868)
chr4 (47-228)||(47099022-47099199)
chr4 (41-227)||(51194270-51194454)
chr4 (162-229)||(17475321-17475388)
chr4 (162-229)||(39158104-39158171)
chr4 (166-229)||(47288081-47288144)
chr4 (162-229)||(51225530-51225597)
chr4 (41-230)||(53654635-53654823)
chr4 (162-228)||(5932769-5932835)
chr4 (162-228)||(7627848-7627914)
chr4 (162-228)||(14593828-14593894)
chr4 (162-228)||(26206982-26207048)
chr4 (162-228)||(30170025-30170091)
chr4 (42-152)||(37066063-37066171)
chr4 (86-152)||(49896596-49896662)
chr4 (162-227)||(2268513-2268577)
chr4 (49-150)||(12799791-12799891)
chr4 (131-229)||(23369307-23369404)
chr4 (47-152)||(26718443-26718547)
chr4 (47-152)||(26731071-26731175)
chr4 (162-231)||(41082315-41082384)
chr4 (49-134)||(45143567-45143651)
chr4 (49-134)||(45152336-45152420)
chr4 (51-228)||(50272969-50273138)
chr4 (86-229)||(51573562-51573704)
chr4 (162-198)||(44257735-44257771)
chr4 (66-232)||(51852072-51852236)
chr4 (48-193)||(52846122-52846263)
chr4 (122-198)||(15522384-15522460)
chr4 (166-225)||(47240820-47240879)
chr4 (162-229)||(49768875-49768941)
chr4 (162-229)||(54000697-54000764)
chr4 (162-229)||(55609171-55609237)
chr4 (162-229)||(56557732-56557799)
chr4 (162-196)||(149490-149524)
chr4 (162-200)||(336813-336851)
chr4 (162-228)||(2738273-2738339)
chr4 (162-228)||(32012896-32012962)
chr4 (162-232)||(40409172-40409241)
chr4 (162-192)||(46173574-46173604)
chr4 (162-196)||(46213001-46213035)
chr4 (162-200)||(50890079-50890117)
chr4 (173-230)||(21172278-21172335)
chr4 (160-201)||(24235347-24235387)
chr4 (47-152)||(25317958-25318061)
chr4 (87-152)||(27326683-27326748)
chr4 (161-206)||(38864740-38864785)
chr4 (47-152)||(53152213-53152317)
chr4 (162-198)||(10250521-10250557)
chr4 (162-230)||(10994158-10994225)
chr4 (160-228)||(19720645-19720712)
chr4 (162-198)||(29175256-29175292)
chr4 (162-230)||(29227248-29227316)
chr4 (162-230)||(31318751-31318818)
chr4 (162-230)||(50721750-50721818)
chr4 (162-198)||(54909353-54909389)
chr4 (162-230)||(56474769-56474837)
[»] chr1 (115 HSPs)
chr1 (47-228)||(50433769-50433949)
chr1 (41-228)||(36577298-36577483)
chr1 (47-229)||(10889938-10890118)
chr1 (47-229)||(52362481-52362661)
chr1 (47-228)||(13489662-13489841)
chr1 (42-210)||(29147760-29147926)
chr1 (47-228)||(35136844-35137023)
chr1 (41-232)||(7128114-7128303)
chr1 (47-193)||(33358050-33358195)
chr1 (39-201)||(38713597-38713757)
chr1 (43-228)||(756856-757039)
chr1 (48-232)||(8411611-8411793)
chr1 (41-229)||(32914958-32915144)
chr1 (47-231)||(34254243-34254425)
chr1 (47-229)||(15704954-15705134)
chr1 (41-229)||(45417771-45417957)
chr1 (47-227)||(48325968-48326146)
chr1 (76-229)||(51466768-51466918)
chr1 (47-230)||(33024463-33024644)
chr1 (40-224)||(47215614-47215796)
chr1 (47-230)||(20565010-20565191)
chr1 (42-229)||(50328028-50328213)
chr1 (40-152)||(40316829-40316940)
chr1 (42-200)||(52267231-52267387)
chr1 (47-228)||(3603111-3603290)
chr1 (85-229)||(26967209-26967351)
chr1 (48-231)||(47214205-47214385)
chr1 (47-229)||(46082013-46082193)
chr1 (48-226)||(51191790-51191966)
chr1 (47-150)||(11823034-11823137)
chr1 (85-229)||(902637-902780)
chr1 (42-152)||(50881997-50882106)
chr1 (41-229)||(51286254-51286439)
chr1 (49-199)||(51436664-51436814)
chr1 (41-216)||(21340534-21340706)
chr1 (86-228)||(44789074-44789214)
chr1 (119-228)||(47820463-47820572)
chr1 (47-231)||(1852843-1853025)
chr1 (69-193)||(8200110-8200233)
chr1 (41-228)||(9008225-9008410)
chr1 (85-228)||(21486247-21486388)
chr1 (47-152)||(35539165-35539269)
chr1 (83-229)||(35539286-35539432)
chr1 (87-152)||(48624951-48625016)
chr1 (42-193)||(50781457-50781606)
chr1 (162-230)||(7171241-7171309)
chr1 (162-230)||(9566966-9567034)
chr1 (42-228)||(16986938-16987121)
chr1 (87-193)||(18336181-18336286)
chr1 (119-229)||(37588638-37588747)
chr1 (86-232)||(47721405-47721550)
chr1 (86-232)||(47728397-47728542)
chr1 (47-193)||(48220036-48220180)
chr1 (162-229)||(48983673-48983740)
chr1 (47-228)||(52714793-52714972)
chr1 (40-232)||(4514339-4514529)
chr1 (47-230)||(26585771-26585952)
chr1 (40-145)||(29154860-29154964)
chr1 (43-193)||(41507082-41507231)
chr1 (42-229)||(50824740-50824925)
chr1 (47-193)||(15015433-15015576)
chr1 (113-227)||(33054045-33054158)
chr1 (162-230)||(34008178-34008246)
chr1 (116-230)||(34040460-34040573)
chr1 (42-228)||(46543330-46543513)
chr1 (119-229)||(46911292-46911401)
chr1 (131-200)||(50775131-50775200)
chr1 (162-229)||(4213071-4213138)
chr1 (39-192)||(6143719-6143870)
chr1 (85-229)||(33125254-33125395)
chr1 (85-228)||(46281436-46281579)
chr1 (162-229)||(48858822-48858889)
chr1 (162-228)||(649768-649834)
chr1 (85-193)||(19969491-19969598)
chr1 (50-152)||(36673627-36673727)
chr1 (162-228)||(40439845-40439911)
chr1 (162-228)||(47642612-47642678)
chr1 (127-229)||(9987950-9988052)
chr1 (160-229)||(11097888-11097956)
chr1 (42-229)||(26837451-26837636)
chr1 (167-232)||(31826946-31827011)
chr1 (47-152)||(36779161-36779265)
chr1 (162-231)||(51193137-51193205)
chr1 (162-198)||(1689421-1689457)
chr1 (165-229)||(1790507-1790571)
chr1 (47-193)||(8447771-8447915)
chr1 (165-229)||(24806230-24806294)
chr1 (162-198)||(30536021-30536057)
chr1 (162-230)||(43893255-43893323)
chr1 (162-230)||(46172412-46172479)
chr1 (127-196)||(52437526-52437595)
chr1 (162-229)||(8350202-8350268)
chr1 (162-229)||(11947794-11947861)
chr1 (173-228)||(19947757-19947812)
chr1 (162-229)||(21433406-21433473)
chr1 (162-229)||(27742616-27742683)
chr1 (172-231)||(46902610-46902668)
chr1 (162-229)||(49446803-49446870)
chr1 (162-196)||(5771753-5771787)
chr1 (86-230)||(21093288-21093431)
chr1 (86-152)||(25259158-25259224)
chr1 (162-240)||(30530580-30530657)
chr1 (162-228)||(37685331-37685396)
chr1 (162-228)||(37700122-37700187)
chr1 (162-228)||(44294015-44294081)
chr1 (162-228)||(49569996-49570062)
chr1 (162-232)||(49660175-49660245)
chr1 (160-229)||(7078504-7078572)
chr1 (47-152)||(38303580-38303684)
chr1 (85-150)||(48392283-48392348)
chr1 (164-228)||(20288347-20288411)
chr1 (162-198)||(27465063-27465099)
chr1 (174-230)||(30467543-30467599)
chr1 (51-150)||(37178780-37178879)
chr1 (172-228)||(49559214-49559270)
[»] chr5 (79 HSPs)
chr5 (40-232)||(189588-189778)
chr5 (35-227)||(10649436-10649626)
chr5 (41-228)||(41175592-41175777)
chr5 (83-232)||(9581575-9581723)
chr5 (47-229)||(8675325-8675505)
chr5 (43-229)||(5042247-5042431)
chr5 (47-188)||(9226341-9226480)
chr5 (46-229)||(17402813-17402994)
chr5 (41-229)||(19481068-19481254)
chr5 (47-152)||(15952937-15953041)
chr5 (46-229)||(34888699-34888880)
chr5 (42-228)||(43441738-43441922)
chr5 (48-229)||(19839879-19840058)
chr5 (86-230)||(30640788-30640931)
chr5 (86-230)||(20770128-20770272)
chr5 (104-228)||(6517712-6517835)
chr5 (85-229)||(37700459-37700601)
chr5 (162-231)||(8267825-8267894)
chr5 (71-193)||(3640112-3640233)
chr5 (162-230)||(8920076-8920144)
chr5 (48-232)||(18695314-18695497)
chr5 (47-229)||(32912037-32912217)
chr5 (47-229)||(43213951-43214131)
chr5 (47-228)||(6446410-6446589)
chr5 (47-228)||(21064118-21064297)
chr5 (47-228)||(34124621-34124800)
chr5 (47-228)||(35098897-35099076)
chr5 (41-230)||(38704083-38704270)
chr5 (48-233)||(6940042-6940226)
chr5 (84-228)||(18842249-18842392)
chr5 (162-228)||(21922150-21922216)
chr5 (86-206)||(43196555-43196674)
chr5 (127-229)||(13089752-13089854)
chr5 (47-152)||(34270402-34270506)
chr5 (48-193)||(1839238-1839381)
chr5 (47-228)||(4430828-4431007)
chr5 (41-152)||(42267421-42267530)
chr5 (46-152)||(2224867-2224971)
chr5 (40-150)||(15008435-15008544)
chr5 (47-152)||(15478733-15478837)
chr5 (162-227)||(41173253-41173318)
chr5 (48-208)||(9939324-9939483)
chr5 (40-152)||(10658989-10659099)
chr5 (162-229)||(23126348-23126415)
chr5 (162-232)||(4088439-4088509)
chr5 (162-228)||(12661953-12662018)
chr5 (172-229)||(15267783-15267840)
chr5 (41-199)||(16437450-16437607)
chr5 (49-150)||(18397059-18397159)
chr5 (86-150)||(4771574-4771638)
chr5 (127-232)||(33037516-33037620)
chr5 (172-228)||(35473323-35473379)
chr5 (162-238)||(36548386-36548461)
chr5 (162-225)||(6241624-6241687)
chr5 (162-229)||(9977118-9977185)
chr5 (162-229)||(26660417-26660483)
chr5 (162-229)||(26932009-26932075)
chr5 (162-200)||(611892-611930)
chr5 (162-196)||(11954463-11954497)
chr5 (162-196)||(14532536-14532570)
chr5 (162-232)||(17097807-17097877)
chr5 (162-228)||(21155987-21156053)
chr5 (162-228)||(22098255-22098321)
chr5 (162-228)||(22649667-22649732)
chr5 (162-228)||(25871451-25871517)
chr5 (162-228)||(33243745-33243810)
chr5 (167-229)||(33620607-33620669)
chr5 (162-231)||(14323974-14324042)
chr5 (164-229)||(18660758-18660822)
chr5 (162-231)||(42446296-42446365)
chr5 (162-198)||(1079958-1079994)
chr5 (40-152)||(2688871-2688982)
chr5 (162-198)||(6758796-6758832)
chr5 (160-192)||(6865791-6865823)
chr5 (162-230)||(9594476-9594543)
chr5 (162-230)||(13309880-13309948)
chr5 (162-198)||(38293364-38293400)
chr5 (165-229)||(38500942-38501005)
chr5 (162-198)||(41321284-41321320)
[»] scaffold0532 (1 HSPs)
scaffold0532 (40-228)||(10964-11150)
[»] scaffold0045 (1 HSPs)
scaffold0045 (77-228)||(41755-41905)
[»] scaffold0136 (1 HSPs)
scaffold0136 (40-232)||(38421-38611)
[»] scaffold0321 (1 HSPs)
scaffold0321 (162-230)||(19634-19702)
[»] scaffold0471 (1 HSPs)
scaffold0471 (40-229)||(6-193)
[»] scaffold0141 (1 HSPs)
scaffold0141 (41-152)||(12007-12117)
[»] scaffold0449 (1 HSPs)
scaffold0449 (47-228)||(9203-9382)
[»] scaffold1956 (1 HSPs)
scaffold1956 (174-230)||(769-825)
[»] scaffold0035 (2 HSPs)
scaffold0035 (174-230)||(72064-72120)
scaffold0035 (86-152)||(71977-72043)
[»] scaffold0204 (1 HSPs)
scaffold0204 (162-229)||(27338-27404)
[»] scaffold0128 (1 HSPs)
scaffold0128 (162-229)||(10935-11002)
[»] scaffold0034 (1 HSPs)
scaffold0034 (162-229)||(101911-101978)
[»] scaffold0005 (1 HSPs)
scaffold0005 (162-228)||(223484-223550)
[»] scaffold0174 (1 HSPs)
scaffold0174 (162-201)||(34799-34838)
[»] scaffold0687 (1 HSPs)
scaffold0687 (47-152)||(2272-2377)
[»] scaffold0201 (1 HSPs)
scaffold0201 (162-228)||(8472-8538)
[»] scaffold0095 (1 HSPs)
scaffold0095 (90-152)||(16337-16399)
[»] scaffold0651 (1 HSPs)
scaffold0651 (162-230)||(4852-4919)
[»] scaffold0432 (1 HSPs)
scaffold0432 (162-230)||(6525-6593)


Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 35452418 - 35452695
Alignment:
Q  1 aatttgtgagagaccggattaaatttttattcataaagtaaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataattta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  35452418 aatttgtgagagaccggattaaatttttattcataaagtaaagagaagtgttatttgaacaatcaatctggttgacaacttgtgtgacaaccataattta 35452517  T
Q  101 tcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtca 200  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||||||       ||||||||||| ||||||||||||||||||||||||| |||    
T  35452518 taaagaaaaagaaggtatttgcacggaaatcaaagcaatagagagataaagt-aaaaaattatgtgagtatgagagagaaagttgtcacaaaaattatca 35452616  T
Q  201 ctaaatggatcttcaagtatcatttctctaaagtaaattagcgttttgtaaaaacaaatttaatttagggtttatccat 279  Q
    | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35452617 ccaaatggatgttcaagtatcatttctctaaagtaaattagcgttttgtaaaaacaaatttaatttagggtttatccat 35452695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 228
Target Start/End: Original strand, 43573430 - 43573614
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| ||||||||||||||||||| | ||||||||||||| || |||||||||||||||| ||||||||   |||||||||||| ||| ||||||||||     
T  43573430 agaggagtgttatttgaacaatcatt-tggttgacaatttttgagacaaccataatttataaagaaaaaattggtatttgcacgaaaaccaaagcaatag 43573528  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||||||||       | |||||| || |||||||||||||||  ||||| ||||||| |||| ||| ||||| |||||||||||    
T  43573529 agagataaagt-aaaaagtaatgtgaatatgagagagaaagttgttgcaaaagttgtcacaaaatagatgttcaaatatcatttctc 43573614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 231
Target Start/End: Original strand, 34757362 - 34757542
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| |||||||||| || ||||||||||||||||||| ||||||||| |||||||||||| |||| |||| ||||  |||||    
T  34757362 agtgttatttgaacaaccaatttggttgacaacttttgtgacaaccataatttataaagaaaaagtaggtatttgcactgaaaccaaaacaat--agaga 34757459  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    |||| |       | || |||||| |||||||| ||||||||||||| |||||  || |||||| ||||| ||||||||||||||    
T  34757460 taaatt--aaaaataatatgagtatgagagagagagttgtcacaaaagttgtcgttagatggatgttcaaatatcatttctctaa 34757542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 40 - 229
Target Start/End: Original strand, 44184444 - 44184631
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| ||| |||||||||||| || | |||||||||| || ||  ||||||||||||||  ||||||||  ||||||||||||| ||| |||||||||    
T  44184444 aaagagtagtattatttgaacaaccatt-tggttgacaacttttggaacaaccataatttacaaagaaaaaataggtatttgcacgaaaaccaaagcaat 44184542  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    | |||||||||||       | ||||||||| |||||||||||||||||||||| ||||| | |||| ||| ||||| ||||||||||||    
T  44184543 agagagataaagt-aaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtcgcaaaatagatgttcaaatatcatttctct 44184631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 42 - 193
Target Start/End: Complemental strand, 7817820 - 7817672
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| || | |||||||||| || ||||||||||||||||||  |||||||||  | |||||||||| ||||||||||||||     
T  7817820 agaggagtgttatttgaacaaccatt-tggttgacaacttatgtgacaaccataatttacaaagaaaaagtggatatttgcacgaaaatcaaagcaatag 7817722  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    |||||||||||       | ||||||||| ||||||||||||||||||||||    
T  7817721 agagataaagt--aaaaataatgtgagtatgagagagaaagttgtcacaaaa 7817672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 229
Target Start/End: Complemental strand, 41894104 - 41893914
Alignment:
Q  37 agtaaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagc 136  Q
    ||||| ||| |||||||||||||||| || | | ||||||||||| ||||||||||||||||||  ||| |||||  ||||| |||||| ||| |||| |    
T  41894104 agtaatgaggagtgttatttgaacaaccatt-tagttgacaatttttgtgacaaccataatttacaaaggaaaagttggtatatgcacgaaaaccaaaac 41894006  T
Q  137 aataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    || | |||||||||||       | ||||||||| || ||||||||||||||||||| ||||||  |||||||| ||||| ||||||||||||    
T  41894005 aacagagagataaagtaaaaag-taatgtgagtatgaaagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 41893914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 42926319 - 42926214
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||| ||||| |||| ||||||||||||| ||||||||||||||||||  ||||||||| | ||||||| || ||||||||| ||||| |||||    
T  42926319 agtgttattttaacaaccaatttggttgacaatttatgtgacaaccataatttacaaagaaaaagtaagtatttgtacagaaatcaaaacaatagagaga 42926220  T
Q  147 taaagt 152  Q
    ||||||    
T  42926219 taaagt 42926214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 13163098 - 13162918
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||||||| |||| ||||| || | ||||||||||| ||||  ||||||||   |||||| ||||||||| || ||||||| |||||    
T  13163098 agtgttatttgaacaatcaatttggt-gacaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagaga 13163000  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||       | || |||||| |||||||||||||||  ||||| |||||||||||| ||| ||||| ||||||||||||    
T  13162999 taaagt-aaaaagtaatatgagtatgagagagaaagttgttgcaaaagttgtcactaaatagatgttcaaatatcatttctct 13162918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 39231620 - 39231800
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||  ||| |||| ||||| || | ||||||||||| ||||  |||||||||  |||||| ||||||||| || ||||||| |||||    
T  39231620 agtgttatttgaacaactaatttggt-gacaacttatttgacaaccatactttacaaagaaaaaggtggtattggcacggaaaccatagcaatagagaga 39231718  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||       | ||||||||| |||||||||||||||  ||||| |||||||||| ||||| ||||| ||||||||||||    
T  39231719 taaagtaaaaaa-taatgtgagtatgagagagaaagttgttgcaaaagttgtcactaactggatgttcaaatatcatttctct 39231800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 216
Target Start/End: Complemental strand, 4713753 - 4713585
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||| || |||| |||||||||| || ||||||||||||||||||  |||||||| |||||||||||| ||||| |||  ||||| |||||    
T  4713753 agtgttatttgaataaccaatttggttgacaacttatgtgacaaccataatttacaaagaaaaataaggtatttgcatggaaaccaacacaatagagaga 4713654  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaa 216  Q
    ||||||       | |||||| |  ||||||||||||||||| |||| ||||||| ||||| || |||||    
T  4713653 taaagt-aaaaaataatgtgaatttgagagagaaagttgtcataaaagttgtcaccaaatgaatattcaa 4713585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 193
Target Start/End: Original strand, 11352859 - 11353010
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||||||||| || | |||||||||| || || |||||||||||||||  ||||||||   ||||||| |||| ||| |||||||||    
T  11352859 aaagaggagtgttatttgaacaaccatt-tggttgacaacttttgggacaaccataatttacaaagaaaaatttggtatttacacgaaaaccaaagcaat 11352957  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    |||||||||||||       | ||||||||| ||||||||||||||||||||||    
T  11352958 aaagagataaagt-aaaaagtaatgtgagtatgagagagaaagttgtcacaaaa 11353010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 231
Target Start/End: Complemental strand, 41458780 - 41458593
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| || | |||||||||| ||   ||||||||||||||||| ||||||||| ||||||||||||  |||||||| |||||     
T  41458780 agaggagtgttatttgaacaaccatt-tggttgacaacttacatgacaaccataatttataaagaaaaagtaggtatttgcacaaaaatcaaaacaatat 41458682  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    ||| |||||||       | ||||||||| ||||||||||||||  |||||||||||||  |||| ||| || || |||||||| |||||    
T  41458681 agaaataaagt-aaaaaataatgtgagtatgagagagaaagttgctacaaaaattgtcataaaatagatgttaaaatatcatttgtctaa 41458593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 227
Target Start/End: Original strand, 3343222 - 3343400
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| | || || ||||||| || |  |||||||||||||||| |||||||||  || ||||||||| ||| |||||||||| |||||    
T  3343222 agtgttatttgaacaa-ctatttgattgacaacttttaagacaaccataatttataaagaaaaagttgggatttgcacgaaaaccaaagcaatagagaga 3343320  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
    ||||||       | |||||| || |||||||||| ||||||||||||||||||  ||||| || ||||| ||||||||||    
T  3343321 taaagt-aaaaagtaatgtgaatatgagagagaaaattgtcacaaaaattgtcataaaatgaatgttcaaatatcatttct 3343400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 152
Target Start/End: Original strand, 8920569 - 8920663
Alignment:
Q  58 aacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagt 152  Q
    ||||| |||| || ||||||| || ||||||||||||||||||| ||||||| | |||||||||||||||||||||| ||||| |||||||||||    
T  8920569 aacaaccaatttgattgacaacttttgtgacaaccataatttataaagaaaacgtaggtatttgcacggaaatcaaaacaatagagagataaagt 8920663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 152
Target Start/End: Complemental strand, 46532679 - 46532577
Alignment:
Q  50 gttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataa 149  Q
    ||||||||||||| |||| |||||||||| || ||||||||||||||||||| ||||||||  |||||||| |||| ||| |||| ||||| ||||||||    
T  46532679 gttatttgaacaaccaatttggttgacaacttttgtgacaaccataatttataaagaaaaattaggtatttacacgaaaaccaaaacaatagagagataa 46532580  T
Q  150 agt 152  Q
    |||    
T  46532579 agt 46532577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 227
Target Start/End: Original strand, 19785964 - 19786149
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| ||||||||||||||||||||| || | ||||| || | ||||||||||| ||||  ||||||||   |||||| ||||| ||| || ||||||    
T  19785964 aaagaggagtgttatttgaacaatcaatttgat-gacaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacgaaaaccagagcaat 19786062  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
    | |||||||||||       | ||||||||| | |||||||||||||  ||||| |||||||||||||||| ||||| ||||||||||    
T  19786063 agagagataaagtaaaaag-taatgtgagtatgtgagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttct 19786149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 39332127 - 39331985
Alignment:
Q  85 tgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagtt 184  Q
    ||||||||||| ||||  ||||||||   |||||| |||||||||||| ||||||| |||||||||||       | |||||||||  ||||||||||||    
T  39332127 tgacaaccatattttacaaagaaaaaagtggtattggcacggaaatcatagcaatagagagataaagtaaaaag-taatgtgagtataagagagaaagtt 39332029  T
Q  185 gtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    || |||||| |||||||||||||||| ||||| |||||||||||    
T  39332028 gttacaaaagttgtcactaaatggatgttcaaatatcatttctc 39331985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 232
Target Start/End: Complemental strand, 28036928 - 28036740
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| ||||||| |||||||| || | |||||||||| || || |||||||||||||||  |||||||||  |||||||||||| ||| ||||||||||     
T  28036928 agaggagtgttaattgaacaaccatt-tggttgacaacttttgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatag 28036830  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    |||||||||||       | |||||||||  ||||||||||||||  ||||| ||||||| | ||| || ||||| ||| |||||||||||    
T  28036829 agagataaagt-aaaaaataatgtgagtataagagagaaagttgttgcaaaagttgtcacaacatgaatgttcaaatattatttctctaaa 28036740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 46829622 - 46829478
Alignment:
Q  85 tgacaaccataa-tttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagt 183  Q
    |||||||||||| ||||  ||||||||| |||| || ||||| |||||||||||||| |||||||||||       | ||||||||| ||||||||||||    
T  46829622 tgacaaccataaatttacaaagaaaaagtaggttttggcacgaaaatcaaagcaatagagagataaagtaaaaacat-atgtgagtatgagagagaaagt 46829524  T
Q  184 tgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||||||||| || |||||| | | ||| ||||||||||||    
T  46829523 tgtcacaaaaattgttacaaaatggttgtacaaatatcatttctct 46829478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 13729884 - 13729725
Alignment:
Q  69 tggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgag 168  Q
    |||||||||| || || |||||||||||||||  ||||||||   |||||||||||| ||| ||| |||||| |||||||||||       | |||||||    
T  13729884 tggttgacaacttttgggacaaccataatttacaaagaaaaaattggtatttgcacgaaaaccaacgcaatagagagataaagtaaaaaa-taatgtgag 13729786  T
Q  169 tacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    || |||| ||||||||||  ||||| ||||||| |||||||| ||||| ||||||||||||    
T  13729785 tatgagaaagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctct 13729725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 238
Target Start/End: Original strand, 33180606 - 33180791
Alignment:
Q  51 ttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaa 150  Q
    |||||||||||| || | |||||||||| || || |||||  ||||||||| |||| |||  | ||||||||||| ||| |||| ||||| |||||||||    
T  33180606 ttatttgaacaaccatt-tggttgacaacttatgagacaatgataatttataaagagaaattatgtatttgcacgaaaaccaaaacaatagagagataaa 33180704  T
Q  151 gtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaagtaaat 238  Q
    ||       | ||||||||| |||||||||| |||||| |||| ||||||| ||||| || ||||| ||||||||||||||| |||||    
T  33180705 gtaaaaaa-taatgtgagtatgagagagaaaattgtcataaaagttgtcacaaaatgaatgttcaaatatcatttctctaaaataaat 33180791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 37899218 - 37899287
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    |||| |||| |||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||    
T  37899218 atgtaagtatgagagagaaagttgtcacaaaaattgtcacaaaatggatgttcaaatatcatttctctaa 37899287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 229
Target Start/End: Complemental strand, 41402691 - 41402506
Alignment:
Q  43 gagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaa 142  Q
    ||||||||||||||||||||  ||| |||| ||||| || | | ||||||||| ||||  ||||||||   |||||| ||||||||| || ||||||| |    
T  41402691 gagaagtgttatttgaacaactaatttggt-gacaacttatttaacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaataga 41402593  T
Q  143 gagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||| ||||        | || |||||| |||||||||||||||  ||||| |||||||||||||||| ||||| ||||||||||||    
T  41402592 gagacaaagaaaaaaaataatatgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatattcaaatatcatttctct 41402506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 83 - 225
Target Start/End: Complemental strand, 43482667 - 43482527
Alignment:
Q  83 tgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaag 182  Q
    |||||||||||||||||   ||||||||| ||||||||||||| ||| |||| ||||| |||||||||||       | ||||||||| || | ||||||    
T  43482667 tgtgacaaccataattttcaaagaaaaagtaggtatttgcacgaaaaccaaaacaatagagagataaagt--aaaaataatgtgagtatgataaagaaag 43482570  T
Q  183 ttgtcacaaaaattgtcactaaatggatcttcaagtatcattt 225  Q
    || |||||||||||||||  |||||||| ||||| ||||||||    
T  43482569 ttatcacaaaaattgtcataaaatggatattcaaatatcattt 43482527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 232
Target Start/End: Original strand, 37808656 - 37808839
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| |||| |||||  | | ||||||||||| ||||  ||||||||   |||||| ||||||||| || | ||||| |||||    
T  37808656 agtgttatttgaacaaccaatttggt-gacaacgtatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaagcataacaatagagaga 37808754  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    ||||||       | |||| |||| |||||||||| ||||  |||||||||||||||||||||| ||||| |||||||| ||||||    
T  37808755 taaagtaaaaaa-taatgtaagtatgagagagaaaattgttgcaaaaattgtcactaaatggatgttcaaatatcatttatctaaa 37808839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 3293271 - 3293168
Alignment:
Q  85 tgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagtt 184  Q
    ||||||| ||||||||| ||||||||| ||||||||||| | |||||||||||||| |||||||||||       |||||||| || |||||||||||||    
T  3293271 tgacaactataatttataaagaaaaagtaggtatttgcatgaaaatcaaagcaatagagagataaagt-aaaaaattatgtgaatatgagagagaaagtt 3293173  T
Q  185 gtcac 189  Q
    |||||    
T  3293172 gtcac 3293168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 229
Target Start/End: Complemental strand, 21559939 - 21559797
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    |||||| ||||||| | |||||| |  ||||||||||||| |||||||||||||| |||||||||||       | ||||||||| |||||| |||||||    
T  21559939 gacaactataatttgtaaagaaataataggtatttgcacgaaaatcaaagcaatagagagataaagt-aaaaaataatgtgagtatgagagataaagttg 21559841  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |  ||||| |||||||  ||||||| ||||| ||||||||||||    
T  21559840 tagcaaaagttgtcacagaatggatgttcaaatatcatttctct 21559797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 228
Target Start/End: Complemental strand, 32815353 - 32815168
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| |||| |||| ||||| || | ||||||||||| ||||  ||||||||   |||||| |||| |||| || |||||||    
T  32815353 aagaggagtgttatttgaacaaccaatttggt-gacaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacagaaaccatagcaata 32815255  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
     |||||||||||       | ||||||||| |||||| ||| ||||  |||||||||||||||||| ||| ||||| ||| |||||||    
T  32815254 gagagataaagt-aaaaaataatgtgagtatgagagaaaaaattgttgcaaaaattgtcactaaatagatgttcaaatataatttctc 32815168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 37899389 - 37899320
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    ||||||||| |||||| ||||||||||||||| ||||||| |||||||| ||||| ||||||||||||||    
T  37899389 atgtgagtatgagagataaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttctctaa 37899320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 228
Target Start/End: Original strand, 10055524 - 10055703
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||| ||||| || | |||||||||| || || |||||| ||||||||  |||||||||  |||||||| ||  ||| |||||||||| |||||    
T  10055524 agtgttatttaaacaaccatt-tggttgacaacttatgggacaactataatttacaaagaaaaagttggtatttgtacaaaaaccaaagcaatagagaga 10055622  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||       | ||||||||| |||| ||||| ||| ||||||||||||||| |||| ||| ||| | |||||||||||    
T  10055623 taaagt-aaaaaataatgtgagtatgagaaagaaaattgccacaaaaattgtcacaaaatagatgttcgaatatcatttctc 10055703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 12645797 - 12645906
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||| ||||||||||| | || |||||||||| || || || ||||||||||||  |||||||||  | |||||||||| ||||||||||||||     
T  12645797 agaggagtgatatttgaacaa-ctatttggttgacaacttttgagataaccataatttacaaagaaaaagttgatatttgcacgaaaatcaaagcaatag 12645895  T
Q  142 agagataaagt 152  Q
    |||||||||||    
T  12645896 agagataaagt 12645906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 44495102 - 44495172
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    ||||||||| ||||||||||||||||| |||| ||||||  |||||||| ||||| |||||||||||||||    
T  44495102 atgtgagtatgagagagaaagttgtcataaaagttgtcatcaaatggatattcaaatatcatttctctaaa 44495172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 46 - 193
Target Start/End: Complemental strand, 3062510 - 3062365
Alignment:
Q  46 aagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagag 145  Q
    ||||||||||||||||| || | |||||||||| ||   ||||||||||||||||  ||||||||  ||||||||||||  ||| |||| ||||| ||||    
T  3062510 aagtgttatttgaacaaccatt-tggttgacaacttacatgacaaccataatttacaaagaaaaaataggtatttgcacaaaaaccaaaacaatagagag 3062412  T
Q  146 ataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    |||||||       | |||||||||  |||||||||||||||||||||    
T  3062411 ataaagt-aaaaagtaatgtgagtataagagagaaagttgtcacaaaa 3062365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 229
Target Start/End: Original strand, 12007156 - 12007258
Alignment:
Q  127 aaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttc 226  Q
    |||||||||||||| ||||| |||||       | ||||||||| |||||||||||||||||||||| ||||||  |||||| | ||||| |||||||||    
T  12007156 aaatcaaagcaatagagagagaaagtagaatgatcatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 12007255  T
Q  227 tct 229  Q
    |||    
T  12007256 tct 12007258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 228
Target Start/End: Original strand, 21023003 - 21023188
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| ||||||||||||||||||||| || | |||||||| | ||||||||||| ||||  ||||||||   ||||||  |||||||| || | |||||    
T  21023003 aagaggagtgttatttgaacaatcaatttgat-gacaatttatttgacaaccatattttacaaagaaaaaagtggtattatcacggaaaccataacaata 21023101  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
     |||||||||||       | |||||| || || ||||||| || || ||||| ||||||||||||| || ||||| |||||||||||    
T  21023102 gagagataaagt-aaaaaataatgtgaatatgaaagagaaaattatcgcaaaagttgtcactaaatgaatgttcaaatatcatttctc 21023188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 42555743 - 42555639
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | |||||||||| || || |||||||||||||||| ||| ||||| ||| ||||| ||| ||| ||| |||||| |||||    
T  42555743 agtgttatttgaacaaccatt-tggttgacaacttttgagacaaccataatttataaaggaaaagtaggcatttgtacgaaaaccaatgcaatagagaga 42555645  T
Q  147 taaagt 152  Q
    ||||||    
T  42555644 taaagt 42555639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 229
Target Start/End: Original strand, 21822487 - 21822671
Alignment:
Q  43 gagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaa 142  Q
    |||||||||||||||||||| || | | |||||||| || |   ||||||||||||||  ||||||||   ||||||| |||| ||||||||| |||| |    
T  21822487 gagaagtgttatttgaacaaccatt-tagttgacaacttttaaaacaaccataatttacaaagaaaaaattggtatttacacgaaaatcaaagtaataga 21822585  T
Q  143 gagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||||       | ||| ||||| |||||||||  ||||  ||||||||||||| |||| ||| ||||| ||||||||||||    
T  21822586 gagataaagt-aaaaagtaatgcgagtatgagagagaacattgttgcaaaaattgtcacaaaatagatgttcaaatatcatttctct 21822671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 152
Target Start/End: Original strand, 26041205 - 26041315
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| ||| ||||||||||||||||| ||| |||||| || | ||||||||||||||||  ||||||||| | |||||  ||||||||||| || |||    
T  26041205 aaagaggagtattatttgaacaatcaatttgg-tgacaacttatttgacaaccataatttacaaagaaaaagta-gtattgacacggaaatcatagaaat 26041302  T
Q  140 aaagagataaagt 152  Q
    | |||||||||||    
T  26041303 agagagataaagt 26041315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 152
Target Start/End: Original strand, 35588780 - 35588887
Alignment:
Q  44 agaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaag 143  Q
    ||||||||||||||||||| || | |  |||| ||||| || |||||  ||||||||  |||||||||  |||||||||||| |||||||||||||| ||    
T  35588780 agaagtgttatttgaacaaccatt-taattgataatttttgagacaattataatttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagag 35588878  T
Q  144 agataaagt 152  Q
    |||||||||    
T  35588879 agataaagt 35588887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 228
Target Start/End: Complemental strand, 47495150 - 47494971
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaaga-aggtatttgcacggaaatcaaagcaataaagag 145  Q
    ||||||||||||||||||||| | ||| |||| || | ||| ||  |||||||| |||  |||||| |||||||||||| ||||| ||| ||||| ||||    
T  47495150 agtgttatttgaacaatcaatttagttcacaacttatatgataattataattta-caaataaaagataggtatttgcacagaaattaaaacaatagagag 47495052  T
Q  146 ataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||||       | ||||||||| || |||||| |||||||||||||||||||| |||| ||| || || |||||||||||    
T  47495051 ataaagtaaaaaa-taatgtgagtatgatagagaa-gttgtcacaaaaattgtcaccaaatagatgtttaaatatcatttctc 47494971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 228
Target Start/End: Original strand, 29162868 - 29163047
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| |||| ||||| || | ||||||  ||| ||||  ||||||||   |||||| ||||||||| || | ||||| |||||    
T  29162868 agtgttatttgaacaaccaatttggt-gacaacttatttgacaattatattttacaaagaaaaaagtggtattggcacggaaaccataacaatagagaga 29162966  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||       | ||||||||| |||||||||||||||   |||| |||| ||||||||||| ||||| |||||||||||    
T  29162967 taaagtaaaaag-taatgtgagtatgagagagaaagttgttgtaaaagttgttactaaatggatgttcaaatatcatttctc 29163047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 35586778 - 35586845
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| |||||||||||||||||||||| || |||  |||||||| ||||| ||||||||||||    
T  35586778 atgtgagtatgagagagaaagttgtcacaaaagttatcataaaatggatgttcaaatatcatttctct 35586845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 47448892 - 47448825
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| |||||||||||||||||||||| ||||||  |||||| | ||||| ||||||||||||    
T  47448892 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctct 47448825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 13152658 - 13152590
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    ||||||||| |||||||||||||||||||||| ||||||  |||||| | ||||| ||||||||||||||    
T  13152658 atgtgagtatgagagagaaagttgtcacaaaagttgtca-aaaatggttgttcaaatatcatttctctaa 13152590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 25067402 - 25067298
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||| ||||| || | ||||||||||||| | ||| ||||||||||||  |||||||| || ||||||||| | ||| |||| ||||| |||||    
T  25067402 agtgttatttaaacaaccatt-tggttgacaatttatatgataaccataatttacaaagaaaaaaaatgtatttgcatgaaaaccaaaacaatagagaga 25067304  T
Q  147 taaagt 152  Q
    ||||||    
T  25067303 taaagt 25067298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 228
Target Start/End: Original strand, 31844534 - 31844675
Alignment:
Q  85 tgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagtt 184  Q
    ||||||| ||||||||  ||||||||| ||||||||| ||  ||| |||| ||||| |||||||||||       | |||||||||  | ||||||| ||    
T  31844534 tgacaactataatttacaaagaaaaagtaggtatttgtacaaaaaccaaaacaatagagagataaagtaaaaaa-taatgtgagtataaaagagaaaatt 31844632  T
Q  185 gtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||| |||||||||||| |||||||| ||||| |||||||||||    
T  31844633 gtcataaaaattgtcac-aaatggatgttcaaatatcatttctc 31844675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 234
Target Start/End: Complemental strand, 42584902 - 42584796
Alignment:
Q  128 aatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
    ||||||||||||| |||||||||||       | ||||||||| |||||||||||||||||||||| |||| |  |||||| | | ||  ||||||||||    
T  42584902 aatcaaagcaatagagagataaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacatatatcatttct 42584803  T
Q  228 ctaaagt 234  Q
    |||||||    
T  42584802 ctaaagt 42584796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 1471183 - 1471342
Alignment:
Q  48 gtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataa-tttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||| | || || | ||||| || | |||||||||||| ||||  ||||| ||| || | || ||||| |||||||||||||| |||||    
T  1471183 gtgttatttgaacaa-ctatttgatagacaacttatttgacaaccataaatttacaaagaagaagtagattttggcacgaaaatcaaagcaatagagaga 1471281  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatgg 208  Q
    ||||||       | ||||||||| |||||||||||||||||||||| |||| || ||||||    
T  1471282 taaagtaaaaacat-atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatgg 1471342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 46773650 - 46773714
Alignment:
Q  165 tgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||| |||||||||| ||||  |||||||||||||| ||||||| ||||| ||||||||||||    
T  46773650 tgagtatgagagagaaaattgttgcaaaaattgtcactgaatggatgttcaaatatcatttctct 46773714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 229
Target Start/End: Original strand, 38779630 - 38779817
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| ||||||||||||| | ||||| || | ||||| || | ||||||||||| ||||  ||||||||   |||||| ||||||||| || |||||||    
T  38779630 aagaggagtgttatttgaatagtcaatttgat-gacaacttatttgacaaccatactttacaaagaaaaaagtggtattggcacggaaaccatagcaata 38779728  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaatt-gtcactaaatggatcttcaagtatcatttctct 229  Q
     |||||| ||||       | ||||||||| |||||| ||||||||  ||||| || |||||| ||||||| ||||| ||||||||||||    
T  38779729 gagagatgaagtaaaaaa-taatgtgagtatgagagaaaaagttgttgcaaaagtttgtcactgaatggatgttcaaatatcatttctct 38779817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 2008863 - 2008933
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    ||||| ||| |||||||||||||||||||||| ||||||  || ||| | ||||| |||||||||||||||    
T  2008863 atgtgtgtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttctctaaa 2008933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 227
Target Start/End: Original strand, 27163554 - 27163729
Alignment:
Q  49 tgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagata 148  Q
    |||||||| |||||||||| |||| |||||||| | ||||||||||| ||||  |||||||| | |||||| ||| |||||| | |||| |  |||||||    
T  27163554 tgttatttaaacaatcaatttggt-gacaatttatttgacaaccatattttacaaagaaaaaaatggtattggcatggaaataatagcagt--agagata 27163650  T
Q  149 aagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
    ||||       | |||||||||  ||||||||||||||  ||||| || ||| |||||| || ||||| ||| ||||||    
T  27163651 aagtaaaaaaataatgtgagtataagagagaaagttgttgcaaaagttatcattaaatgaatgttcaaatataatttct 27163729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 34978362 - 34978324
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtca 200  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  34978362 atgtgagtatgagagagaaagttgtcacaaaaattgtca 34978324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 225
Target Start/End: Complemental strand, 11565033 - 11564896
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    ||||||||||||||   ||||||||  ||||||| ||||| |||||||||||||| |||||||||||       | ||||||||| |||||||||||||     
T  11565033 gacaaccataatttgcaaagaaaaaataggtatt-gcacgaaaatcaaagcaatagagagataaagt-aaaaaataatgtgagtatgagagagaaagtta 11564936  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcattt 225  Q
    |  ||||| ||||||| ||||  || ||||| ||||||||    
T  11564935 tagcaaaagttgtcacaaaataaatgttcaaatatcattt 11564896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 225
Target Start/End: Original strand, 13906353 - 13906525
Alignment:
Q  51 ttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaa 150  Q
    ||||||||||||| ||| |||| || ||||| | ||||||||||| ||||  ||||||||   |||||| ||||||||| || | ||||| |||||||||    
T  13906353 ttatttgaacaattaatttggt-gataatttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccataacaatagagagataaa 13906451  T
Q  151 gtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcattt 225  Q
    ||       | |||| ||||  ||||||||||||||  ||||  |||||||| ||||||| ||||| ||||||||    
T  13906452 gtaaaaaaataatgtaagtataagagagaaagttgttgcaaaggttgtcact-aatggatgttcaaatatcattt 13906525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 29002674 - 29002609
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
    |||||| ||||||||||||||||||  ||||| |||||||||||| ||| || || ||||||||||    
T  29002674 atgtgattacgagagagaaagttgttgcaaaagttgtcactaaatagatgtttaaatatcatttct 29002609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 32777713 - 32777778
Alignment:
Q  163 tgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||||| ||||||||||||||||| |||| ||||||  |||||| | ||||| |||||||||||    
T  32777713 tgtgagtatgagagagaaagttgtcataaaagttgtcaaaaaatggttgttcaaatatcatttctc 32777778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 6269432 - 6269396
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| |||||||||||||||||||||||||||    
T  6269432 atgtgagtatgagagagaaagttgtcacaaaaattgt 6269396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 229
Target Start/End: Complemental strand, 16980452 - 16980296
Alignment:
Q  71 gttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagta 170  Q
    |||||||| || || ||||| |||||||||  ||||||||   ||||||||| || ||| ||||||| || |||||||||||       | |||||||||    
T  16980452 gttgacaacttttgagacaatcataatttacaaagaaaaaattggtatttgcccgaaaaccaaagca-tagagagataaagtaaaaag-taatgtgagta 16980355  T
Q  171 cgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
      ||||||||||||||  ||||| ||||||| ||||| || ||||| ||||||||||||    
T  16980354 taagagagaaagttgttgcaaaagttgtcacaaaatgaatgttcaaatatcatttctct 16980296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 230
Target Start/End: Original strand, 18111540 - 18111685
Alignment:
Q  86 gacaaccata-atttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagtt 184  Q
    |||||||||| |||||  ||||||||  ||| ||| ||| | ||||||||| |||| |||||||||||       | ||||||||| |||||||||| ||    
T  18111540 gacaaccatatatttacaaagaaaaaataggcattggcaagaaaatcaaagtaatagagagataaagtaaaaatataatgtgagtatgagagagaaaatt 18111639  T
Q  185 gtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    |||||||||||| | |  |||||| | |  ||||||||||||||||    
T  18111640 gtcacaaaaattattataaaatggttgtagaagtatcatttctcta 18111685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 19426645 - 19426578
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||| ||||||||||||||||| |||| ||||||| |||||| | | ||| |||||||||||||    
T  19426645 atgtgagtatgagagagaaagttgtca-aaaagttgtcacaaaatggttgtacaaatatcatttctcta 19426578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 44496808 - 44496844
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| |||||||||||||||||||||||||||    
T  44496808 atgtgagtatgagagagaaagttgtcacaaaaattgt 44496844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 8904422 - 8904481
Alignment:
Q  172 gagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    |||||||||| |||||||||||||| |||| ||| || | ||||| ||||||||||||||    
T  8904422 gagagagaaaattgtcacaaaaattatcacaaaacggttgttcaaatatcatttctctaa 8904481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 8920865 - 8920920
Alignment:
Q  173 agagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||||||||||||| |||| || ||| ||||||||| ||||| |||||||||||    
T  8920865 agagagaaagttgtcaaaaaagttatcattaaatggatgttcaaatatcatttctc 8920920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 193
Target Start/End: Original strand, 47078137 - 47078287
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||||||||| |||| | ||  |||| || | ||||||||| ||||||  ||||||||| |  |||| ||||||||| || ||||||    
T  47078137 aaagagtagtgttatttgaacaaccaattttgta-acaacttatttgacaaccaaaatttacaaagaaaaagtaa-tattggcacggaaaccatagcaat 47078234  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    | |||||||||||       | ||||||||| ||||||||||||||||| ||||    
T  47078235 agagagataaagt-aaaaaataatgtgagtatgagagagaaagttgtcataaaa 47078287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 6109993 - 6110051
Alignment:
Q  172 gagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    |||| ||| ||||||||||||||||||||| |||||| | | ||| |||||||||||||    
T  6109993 gagatagagagttgtcacaaaaattgtcacaaaatggttgtacaattatcatttctcta 6110051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 196
Target Start/End: Original strand, 29723932 - 29723966
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaatt 196  Q
    ||||||||| |||||||||||||||||||||||||    
T  29723932 atgtgagtatgagagagaaagttgtcacaaaaatt 29723966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 30941451 - 30941386
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||||||||||||||| |||| |  |||||| | ||||| |||||||||||    
T  30941451 atgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttctc 30941386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 33050248 - 33050183
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| ||||||||||||||| |||||| ||||||| |||||| | | ||| |||||||||||    
T  33050248 atgtgagtatgagagagaaagttgt-acaaaagttgtcacaaaatggttgtacaaatatcatttctc 33050183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 37666770 - 37666836
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagt 152  Q
    |||||||||||||||  || |||||  |  ||||| |||| ||||||||||||||||||||||||||    
T  37666770 gacaaccataatttacaaataaaaaatatatatttacacgaaaatcaaagcaataaagagataaagt 37666836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 39823875 - 39823809
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||  |||||| |||||||||| ||||||| |||| ||||| || ||||| |||||||||||    
T  39823875 atgtgagtgtgagagaaaaagttgtcataaaaattatcaccaaatgaatgttcaaatatcatttctc 39823809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 40842470 - 40842405
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| ||||||||||||||||| ||| |||||||| || ||||| | ||| |||||||||||    
T  40842470 atgtgagtatgagagagaaagttgtca-aaagattgtcacaaagtggatgtacaaatatcatttctc 40842405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 41018729 - 41018659
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    ||||||||| |||| ||||||||||||||||| |||||   |||| | | ||||| |||||||||||||||    
T  41018729 atgtgagtatgagatagaaagttgtcacaaaagttgtccaaaaatagttgttcaaatatcatttctctaaa 41018659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 43159584 - 43159646
Alignment:
Q  166 gagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||| |||| |||||||||||||||||||||| |  |||||| | ||||| |||||||||||    
T  43159584 gagtatgagatagaaagttgtcacaaaaattgttaaaaaatggttgttcaaatatcatttctc 43159646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 35822990 - 35823047
Alignment:
Q  172 gagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||||||||||| ||||||||| |  |||||||| | ||| ||||||||||||    
T  35822990 gagagagaaagttgtcataaaaattgttagaaaatggatgtacaaatatcatttctct 35823047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 5174557 - 5174593
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    |||||||||  ||||||||||||||||||||||||||    
T  5174557 atgtgagtataagagagaaagttgtcacaaaaattgt 5174593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 21204395 - 21204359
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  21204395 atgtgagtatgagagagaaagttgtcacaaaagttgt 21204359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 43079638 - 43079705
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||| |||||||||||||||| |||||||| |||| || ||| | | ||| |||||||||||||    
T  43079638 atgtgagtatgagagagaaagttgtc-caaaaattatcacaaagtggttgtacaaatatcatttctcta 43079705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 1e-47; HSPs: 103)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 42 - 228
Target Start/End: Original strand, 37927091 - 37927276
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| |||| || ||||||| |||||||||||||||||||||| ||||||||  ||||||||| ||||||| ||||||||||     
T  37927091 agaggagtgttatttgaacaaccaatttgattgacaacttgtgtgacaaccataatttataaagaaaaaataggtatttgtacggaaaccaaagcaatag 37927190  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||||||||       ||||||||||| |||||||||||||||||||||| ||||||| |||||||| ||||| |||||||||||    
T  37927191 agagataaagt-aaaaaattatgtgagtatgagagagaaagttgtcacaaaagttgtcaccaaatggatgttcaaatatcatttctc 37927276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 47 - 227
Target Start/End: Complemental strand, 20080252 - 20080074
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||| ||||||||| |||| ||||||| ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||| |||||    
T  20080252 agtgttttttgaacaaccaatttggttgataatttttgtgacaaccataatttataaagaaaaagtaggtatttgcacggaaaccaaaacaatagagaga 20080153  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
    ||||||       | ||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||| || |||||||    
T  20080152 taaagt--aaaaataatgtgagtatgagagagaaagttgtcacaaaaattgtcattaaatggatgttcaaataccatttct 20080074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 56 - 228
Target Start/End: Original strand, 50638251 - 50638420
Alignment:
Q  56 tgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnn 155  Q
    |||| ||| ||| |||||||||| |||||||||||||||||||||| ||||||| | ||||||||||||||||| |||||||||| |||||||||||       
T  50638251 tgaataattaatttggttgacaacttgtgtgacaaccataatttataaagaaaatgtaggtatttgcacggaaaccaaagcaatagagagataaagt-aa 50638349  T
Q  156 nnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
        |||||||||||   |||||||||||||||||||||||||||| |||| ||| ||||| |||||||||||    
T  50638350 aaaattatgtgagta--tgagagaaagttgtcacaaaaattgtcaccaaatagatgttcaaatatcatttctc 50638420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 47 - 232
Target Start/End: Original strand, 24095298 - 24095481
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||| || || |||||||||| || | ||||||||||||||||  ||||||||| ||||||||||||| ||| |||||||||| ||| |    
T  24095298 agtgttatttgaaca-tccatttggttgacaacttttatgacaaccataatttacaaagaaaaagtaggtatttgcacgaaaaccaaagcaatagagaaa 24095396  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    ||||||       | ||||||||| ||||||||||||||||||||||||| |||  |||||||| ||||| |||||||||||||||    
T  24095397 taaagt-aaaaaataatgtgagtatgagagagaaagttgtcacaaaaattatcataaaatggatgttcaaatatcatttctctaaa 24095481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 228
Target Start/End: Complemental strand, 55400184 - 55399999
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| || | |||||||||| || |  |||||||||||||||| ||||||||   |||||||||||| ||| ||||||||||    
T  55400184 aagaggagtgttatttgaacaaccatt-tggttgacaacttttaggacaaccataatttataaagaaaaaattggtatttgcacgaaaaccaaagcaata 55400086  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
     |||||||||||       | ||||||||| |||||||||||||||||||||| ||||||  |||||||| ||||| |||||||||||    
T  55400085 gagagataaagt-aaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctc 55399999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 40 - 228
Target Start/End: Original strand, 3953360 - 3953546
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| ||||||||||||||||||| | ||||||||||||| || ||||| |||||||||| |||||||||  | |||||||| | ||| |||||||||    
T  3953360 aaagaggagtgttatttgaacaatcatt-tggttgacaatttttgagacaatcataatttataaagaaaaagttgatatttgcatgaaaaccaaagcaat 3953458  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    | ||||||| |||       | ||||||||| ||||||||||||||||||||||||| |||  ||| |||| ||||| |||||||||||    
T  3953459 agagagatagagt-aaaaagtaatgtgagtatgagagagaaagttgtcacaaaaattatcataaaagggatgttcaaatatcatttctc 3953546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 41 - 228
Target Start/End: Original strand, 49363137 - 49363322
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||||||||||||||||||||||||| |||  || ||||| | ||||||| ||| ||||| ||||||||   |||||| ||||||||| || | |||||    
T  49363137 aagagaagtgttatttgaacaatcaatttggg-gataatttatttgacaactatattttataaagaaaaaagtggtattggcacggaaaccatatcaata 49363235  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
     |||||||||||       | ||||||||| |||||||||||||||  ||||| |||||||||||||||| ||||| |||||||||||    
T  49363236 gagagataaagtaaaaag-taatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctc 49363322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 229
Target Start/End: Complemental strand, 21196307 - 21196123
Alignment:
Q  43 gagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaa 142  Q
    |||||||||||||||||||| || | || |||||||||| || || || |||||||||  ||||||||  | ||||||||||| ||||||||| |||| |    
T  21196307 gagaagtgttatttgaacaaccatt-tgattgacaatttatgggataatcataatttacaaagaaaaaatatgtatttgcacgaaaatcaaagtaataga 21196209  T
Q  143 gagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||||       | |||| |||| ||||||||||||||||||| || ||||||| |||||||| ||||| ||||||||||||    
T  21196208 gagataaagt-aaaaaataatgtaagtatgagagagaaagttgtcacagaagttgtcacaaaatggatgttcaaatatcatttctct 21196123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 229
Target Start/End: Original strand, 10206858 - 10207045
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||||||||| |||| |||| ||||| || | ||||||||||| ||||  ||||||||   |||||| ||||||||| || |||||     
T  10206858 aaagaggagtgttatttgaacaaccaatttggt-gacaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaac 10206956  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    | |||||||||||       | ||||||||| |||||||||||||||  ||||| |||||||||||||||| ||||| ||||||||||||    
T  10206957 agagagataaagtaaaaag-taatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctct 10207045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 47 - 227
Target Start/End: Original strand, 39697114 - 39697292
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| | || || ||||||| || || |||||||||||||||  ||||||||   | |||||||||| ||| |||||||||| |||||    
T  39697114 agtgttatttgaacaa-ctatttgattgacaacttttgggacaaccataatttacaaagaaaaaattgatatttgcacgaaaaccaaagcaatagagaga 39697212  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
    ||||||       | ||||||||| ||||||||||||||| ||||||||| |||| |||||||| ||||| ||||||||||    
T  39697213 taaagtaaaaag-taatgtgagtatgagagagaaagttgttacaaaaattatcacaaaatggatgttcaaatatcatttct 39697292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 228
Target Start/End: Original strand, 24482849 - 24483034
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| || | ||||| |||| || || ||||||||||| |||  |||||||||  |||||||||||| ||| |||| |||||    
T  24482849 aagaggagtgttatttgaacaaccatt-tggtttacaacttttgggacaaccataacttacaaagaaaaagttggtatttgcacgaaaaccaaaacaata 24482947  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
     |||||||||||       | ||||||||| |||||||||||||||  ||||| ||||||| |||||||| ||||| |||||||||||    
T  24482948 tagagataaagt-aaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctc 24483034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 230
Target Start/End: Original strand, 44677376 - 44677557
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| |||| ||||| || | ||||||||||| ||||  ||||||||   |||||| ||||||||| || ||||||| |||||    
T  44677376 agtgttatttgaacaaccaatttggt-gacaacttatttgacaaccatactttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagaga 44677474  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||       | ||||||||| |||||||||| ||||  ||||| |||||||||||||||| ||||| |||||||||||||    
T  44677475 taaagtaaaaaa-taatgtgagtatgagagagaaaattgttgcaaaagttgtcactaaatggatgttcaaatatcatttctcta 44677557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 229
Target Start/End: Complemental strand, 46019646 - 46019461
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| || | |||||||||| || ||  ||||||||||||||  |||||||   ||||||||| ||| ||| ||||||||||     
T  46019646 agagtagtgttatttgaacaaccatt-tggttgacaacttttggaacaaccataatttacaaagaaaagataggtatttgtacgaaaaccaaagcaatag 46019548  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||||       | ||||||||| |||||||||||||||||||||| ||||| | |||| ||| ||||| ||||||||||||    
T  46019547 agagataaagtaaaaag-taatgtgagtatgagagagaaagttgtcacaaaagttgtcgcaaaatagatgttcaaatatcatttctct 46019461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 40 - 152
Target Start/End: Original strand, 51465799 - 51465910
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||||||||| || | |||||||||| || || |||||||||||||||  |||||||||  |||||||||||| |||||||||||||    
T  51465799 aaagaggagtgttatttgaacaaccatt-tggttgacaacttttgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaatcaaagcaat 51465897  T
Q  140 aaagagataaagt 152  Q
    | |||||||||||    
T  51465898 agagagataaagt 51465910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 39 - 225
Target Start/End: Original strand, 21195775 - 21195959
Alignment:
Q  39 taaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaa 138  Q
    ||||||| ||| ||||||||||||||||| || |  ||||||| | ||||||| ||||||||| ||| ||||| || ||||  ||||||||||| |||||    
T  21195775 taaagaggagtattatttgaacaatcaatttgata-acaatttatttgacaactataatttataaaggaaaagtag-tattgacacggaaatcatagcaa 21195872  T
Q  139 taaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcattt 225  Q
    || |||||||||||       | || || ||| |||||||||||||||||||||| ||||||| ||||||||  |||| ||||||||    
T  21195873 tagagagataaagtaaaaatataatatgtgtatgagagagaaagttgtcacaaaagttgtcaccaaatggatgctcaaatatcattt 21195959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 231
Target Start/End: Original strand, 50206855 - 50207044
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||| ||||| | || | |||||||| || |  |||||||||||||||  |||||||||  | |||||||||| ||| |||| ||||    
T  50206855 aaagaggagtgttatttaaacaa-ctatttagttgacaacttttaggacaaccataatttacaaagaaaaagttgatatttgcacgaaaaccaaaacaat 50206953  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    | |||||||||||       | ||||||||| |||||||||||||||  ||||| ||||||| |||||||| ||||| ||||||||||||||    
T  50206954 agagagataaagtaaaaag-taatgtgagtatgagagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctctaa 50207044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 26672580 - 26672473
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| ||||||||||||||||| ||| |||||||||| |   |||||||||||||||||  ||||||||| | |||||||||| ||||||||| |||||     
T  26672580 agaggagtgttatttgaacaattaatttggttgacaaat---gtgacaaccataatttacaaagaaaaagtaagtatttgcacagaaatcaaaacaatag 26672484  T
Q  142 agagataaagt 152  Q
    |||||||||||    
T  26672483 agagataaagt 26672473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 37508390 - 37508570
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| || | ||||| || | ||||||||||| ||||  ||||||||   |||||| ||||||||| || ||||||| |||||    
T  37508390 agtgttatttgaacaaccaatttgat-gacaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagaga 37508488  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||       | ||||||||| |||||||||||||||  ||||| || ||||||||||||| ||||| ||||||||||||    
T  37508489 taaagtaaaaag-taatgtgagtatgagagagaaagttgttgcaaaagttatcactaaatggatgttcaaatatcatttctct 37508570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 49761486 - 49761342
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||||| | | |||||||| ||   |||||| |||||||||| ||||||||| ||||||||||||  ||| |||||||||| |||||    
T  49761486 agtgttatttgaacaatcatt-tagttgacaacttacatgacaatcataatttataaagaaaaagtaggtatttgcacaaaaaccaaagcaatagagaga 49761388  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    ||||||       | ||||||||| ||||||||||||||||||||||    
T  49761387 taaagt-aaaaaataatgtgagtatgagagagaaagttgtcacaaaa 49761342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 41 - 229
Target Start/End: Complemental strand, 6999355 - 6999168
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| || | |||||||||| || || |||||||||||||||  | ||||||  | ||||||||||| ||||||||||||||    
T  6999355 aagaggagtgttatttgaacaaccatt-tggttgacaacttatgggacaaccataatttacaatgaaaaaatatgtatttgcacgaaaatcaaagcaata 6999257  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
     ||| |||||||       | ||||||||| |||||| |||||| | ||| || ||||||  ||||| || ||||| ||||||||||||    
T  6999256 gagaaataaagtaaaaaaataatgtgagtaagagagaaaaagttattacagaagttgtcataaaatgaatgttcaaatatcatttctct 6999168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 32767855 - 32767675
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||||||| |||| ||||| || | ||||||||||| ||||  ||||||||   || |||  |||||||| || ||||||| |||||    
T  32767855 agtgttatttgaacaatcaatttggt-gacaacttatttgacaaccatactttacaaagaaaaaagtggcattgacacggaaaccatagcaatagagaga 32767757  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||       | ||||||||| |||||||||| || |  ||||| |||||||||||||||| ||||| ||||||||||||    
T  32767756 taaagtaaaaaa-taatgtgagtatgagagagaaaattattgcaaaagttgtcactaaatggatattcaaatatcatttctct 32767675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 232
Target Start/End: Complemental strand, 42683968 - 42683823
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    |||||||||||||| | |||||| |  ||||||||||||| |||||||||||||| |||||||||||       | ||||| ||| || ||||||| |||    
T  42683968 gacaaccataatttgtaaagaaagaacaggtatttgcacgaaaatcaaagcaatagagagataaagt-aaaagataatgtgggtatgaaagagaaaattg 42683870  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    | ||||||||| |||| ||||| || ||||| |||||||||||||||    
T  42683869 taacaaaaattatcacaaaatgaatgttcaaatatcatttctctaaa 42683823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 43905039 - 43904971
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||||||| ||||| |||||||||||||    
T  43905039 atgtgagtatgagagagaaagttgttacaaaaattatcactaaatggatgttcaaatatcatttctcta 43904971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 8846672 - 8846488
Alignment:
Q  46 aagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagag 145  Q
    ||||||||||| |||||||||| |||||||||| || | ||| || |||||||||| ||||||||  | ||||||| || |||| |||| ||||  ||||    
T  8846672 aagtgttatttcaacaatcaatttggttgacaacttatatgataatcataatttataaagaaaaaataagtatttgtacagaaaccaaaacaatggagag 8846573  T
Q  146 ataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    |||||||       | ||||||||| |||||||||| ||||||||||| |||| |   ||| ||| ||||| ||||||||||||||    
T  8846572 ataaagt-aaaaaataatgtgagtatgagagagaaaattgtcacaaaagttgttatcgaatagatgttcaaatatcatttctctaa 8846488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 228
Target Start/End: Original strand, 29573249 - 29573427
Alignment:
Q  49 tgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataa-tttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagat 147  Q
    |||||||||||||| || | || | |||||||| | |||||||||||| ||||  ||| ||||| |||| || ||||| |||||||||||||| ||||||    
T  29573249 tgttatttgaacaaccatt-tgatagacaatttatttgacaaccataaatttacaaaggaaaagtaggttttggcacgaaaatcaaagcaatagagagat 29573347  T
Q  148 aaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||       | ||||||||| |||||||||||||||||||||| |||| || |||||| | | ||| |||||||||||    
T  29573348 aaagtaaaaacat-atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctc 29573427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 229
Target Start/End: Complemental strand, 49417760 - 49417574
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||||||||| |||| | || ||||| || | | ||||||| ||||||  ||||||||| || |||| ||||||||| || ||||||    
T  49417760 aaagagtagtgttatttgaacaaccaattttgt-gacaacttatttaacaaccaaaatttacaaagaaaaagtag-tattggcacggaaaccatagcaat 49417663  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    | ||||||||| |       | ||||||||| |||||||||||||||||||||| ||||||  |||| ||| ||||| ||||||||||||    
T  49417662 agagagataaaataaaaaa-taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttctct 49417574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 229
Target Start/End: Original strand, 54773639 - 54773826
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||| |||| || |||| |||| ||||| || | ||||||||||| ||||  ||||||||   ||||||  |||||||| || ||||| |    
T  54773639 aagaggagtgttatatgaataaccaatttggt-gacaacttatttgacaaccatactttacaaagaaaaaagtggtattgacacggaaaccatagcaaga 54773737  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
     |||||||||||       | || |||||| ||||||||||||||| | |||| |||||||||||||||| ||||| ||||||||||||    
T  54773738 gagagataaagtaaaaaaataatatgagtatgagagagaaagttgttataaaagttgtcactaaatggatgttcaaatatcatttctct 54773826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 8821696 - 8821626
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    ||||||||| ||||||||||||||| |||||| |||||||||||| ||| ||||| |||||||||||||||    
T  8821696 atgtgagtatgagagagaaagttgttacaaaagttgtcactaaatagatgttcaaatatcatttctctaaa 8821626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 9158759 - 9158869
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| ||||||||||||||||  ||| |||||||||| || ||||||||||||||||||  ||||||||| | |||||| || ||||| |||| |||||     
T  9158759 agaggagtgttatttgaacaactaatttggttgacaacttatgtgacaaccataatttacaaagaaaaagtaagtatttacatggaaaccaaaacaatag 9158858  T
Q  142 agagataaagt 152  Q
    | |||||||||    
T  9158859 atagataaagt 9158869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 225
Target Start/End: Original strand, 31376696 - 31376833
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    |||||||| |||||   ||||||||  ||||||| ||||| |||||||||||||| |||||||||||       ||||||||||| || |||||||||||    
T  31376696 gacaaccaaaatttgcaaagaaaaaataggtatt-gcacgaaaatcaaagcaatagagagataaagtaaaaaa-ttatgtgagtatgaaagagaaagttg 31376793  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcattt 225  Q
    | |||||| ||||||| |||||||| ||||| ||||||||    
T  31376794 taacaaaagttgtcacaaaatggatgttcaaatatcattt 31376833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 229
Target Start/End: Original strand, 54694043 - 54694185
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    |||||||||||||| | |||||| |  ||||||||||||| |||||||||||||| |||||||||||       | | ||||  | ||||||||||||||    
T  54694043 gacaaccataatttgtaaagaaagaataggtatttgcacgaaaatcaaagcaatagagagataaagt-aaaaaataacgtgataatgagagagaaagttg 54694141  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |  ||||||||||||| |||| ||| ||||| ||||||||||||    
T  54694142 tagcaaaaattgtcacaaaatagatattcaaatatcatttctct 54694185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 228
Target Start/End: Original strand, 34057883 - 34058024
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    |||||| ||||||||| |||||||||  |||| ||||||| ||| |||||||||| | |||||||||       | | ||||||| ||||||||||||||    
T  34057883 gacaactataatttataaagaaaaagttggtaattgcacgaaaaacaaagcaatagaaagataaagtaaaaag-taacgtgagtatgagagagaaagttg 34057981  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||||| || |||  |||||||| ||||| |||||||||||    
T  34057982 tcacaaaagttatcataaaatggatgttcaaatatcatttctc 34058024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 229
Target Start/End: Original strand, 39670983 - 39671170
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| |||| |||| ||||| || | ||||||||||| ||||  ||||||||   | ||||  ||||||||||| | |||||    
T  39670983 aagaggagtgttatttgaacaaccaatttggt-gacaacttatttgacaaccatattttacaaagaaaaaagtgatattgacacggaaatcataacaata 39671081  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacga-gagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
     |||||||||||       | ||||||||| || |||||||||||||  ||||| |||||||||||| ||| ||||| ||||||||||||    
T  39671082 gagagataaagtaaaaag-taatgtgagtatgaagagagaaagttgttgcaaaagttgtcactaaatagatgttcaaatatcatttctct 39671170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 232
Target Start/End: Original strand, 46852024 - 46852206
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | |||||||||| || || ||||| |||||||||  |||||||||  | |||||||||| ||| |||| ||||| | | |    
T  46852024 agtgttatttgaacaaccatt-tggttgacaacttttgggacaatcataatttacaaagaaaaagttgatatttgcacgaaaaccaaaacaatagacaaa 46852122  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    ||||||       | || |||||| ||||||||||||||||||||||  | ||| ||||||||| ||||| |||||||||||||||    
T  46852123 taaagtaaaaag-taatatgagtatgagagagaaagttgtcacaaaagctatca-taaatggatgttcaaatatcatttctctaaa 46852206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 225
Target Start/End: Complemental strand, 49167888 - 49167753
Alignment:
Q  89 aaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtca 188  Q
    ||||||||||||| ||||||||| || ||||   | |||||||| ||||||| |||||||||||       | ||||| ||| |||||||||||||||||    
T  49167888 aaccataatttataaagaaaaagtag-tattgatatggaaatcatagcaatagagagataaagtaaaaatataatgtgtgtatgagagagaaagttgtca 49167790  T
Q  189 caaaaattgtcactaaatggatcttcaagtatcattt 225  Q
    ||||| ||||||  |||||||| ||||| ||||||||    
T  49167789 caaaagttgtcatcaaatggatgttcaaatatcattt 49167753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 30862958 - 30863027
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaa 110  Q
    |||||||||||||||||||||||||||| ||| ||||||||| | |||||||| |||||||| ||||||||    
T  30862958 aaagagaagtgttatttgaacaatcaatttgg-tgacaatttatttgacaaccctaatttataaagaaaaa 30863027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 10811201 - 10811132
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    ||||||||| |||||||||||||||||||||| ||||||  |||||| | ||||| ||||||||||||||    
T  10811201 atgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggttgttcaaatatcatttctctaa 10811132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 37411060 - 37410952
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| || | | ||||||||  | ||  ||||||||||||||  ||| ||||| |||||||||| || ||||||||||||||    
T  37411060 aagaggagtgttatttgaacaaccatt-tagttgacaacctatgaaacaaccataatttacaaagtaaaagtaggtatttgcgcgaaaatcaaagcaata 37410962  T
Q  141 aagagataaa 150  Q
    ||||||||||    
T  37410961 aagagataaa 37410952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 52937362 - 52937258
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | ||||||| ||||| || |||||||||||||||  ||||||||   |||||||||||  ||||||||| |||| |||||    
T  52937362 agtgttatttgaacaaccatt-tggttgataatttttgagacaaccataatttacaaagaaaaaattggtatttgcacaaaaatcaaagtaatagagaga 52937264  T
Q  147 taaagt 152  Q
    ||||||    
T  52937263 taaagt 52937258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 11633792 - 11633612
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| |||| || ||||| | ||||||||||| ||||  || | |||   |||||| ||||||||| || ||||||| |||||    
T  11633792 agtgttatttgaacaaccaatttggt-gataatttatttgacaaccatattttacaaaaagaaaagtggtattggcacggaaaccatagcaatagagaga 11633694  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||       | |||||| || |||||||||||||||  ||||| ||||  |||||||||| ||||| ||||||||||||    
T  11633693 taaagtaaaaag-taatgtgaatatgagagagaaagttgttgcaaaagttgttgctaaatggatgttcaaatatcatttctct 11633612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 42358609 - 42358682
Alignment:
Q  127 aaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtca 200  Q
    |||||||||||||| |||||||||||       | ||||||||| |||||||||||||||||||||||||||||    
T  42358609 aaatcaaagcaatagagagataaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaaattgtca 42358682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 26996382 - 26996315
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| ||||||||||||||| |||||| |||| |||||||| || ||||| ||||||||||||    
T  26996382 atgtgagtatgagagagaaagttgttacaaaagttgttactaaatgaatgttcaaatatcatttctct 26996315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 27718790 - 27718861
Alignment:
Q  161 tatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    |||||||||| |||||||||||||||||||||| |||| || |||||  | | |||||||||||||||||||    
T  27718790 tatgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatgattatacaagtatcatttctctaaa 27718861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 152
Target Start/End: Original strand, 33795618 - 33795721
Alignment:
Q  49 tgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagata 148  Q
    |||||||||||||| |||| | |||||||| ||  |||||||||||||||||  ||||||||| |  |||||  ||||||| |||| ||||| |||||||    
T  33795618 tgttatttgaacaaccaatttagttgacaacttacgtgacaaccataatttacaaagaaaaagtaattatttatacggaaaacaaaacaatagagagata 33795717  T
Q  149 aagt 152  Q
    ||||    
T  33795718 aagt 33795721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 46253799 - 46253697
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| ||   || ||||||| || || |||||||||||||||  ||||||| |  |||||||||||| ||| |||||||||| |||||    
T  46253799 agtgttatttgaacaacca---tgattgacaacttttgggacaaccataatttacaaagaaaatgttggtatttgcacgaaaaccaaagcaatagagaga 46253703  T
Q  147 taaagt 152  Q
    ||||||    
T  46253702 taaagt 46253697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 228
Target Start/End: Original strand, 3347057 - 3347193
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    ||||| |||||||| | |||||| |  ||||||||||||| |||||||||||||| |||||||||         | |||||| || ||||||||||||||    
T  3347057 gacaatcataatttgtaaagaaagaataggtatttgcacgaaaatcaaagcaatagagagataaa------aaataatgtgaatatgagagagaaagttg 3347150  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |  ||||| || |||| |||||||| ||||| |||||||||||    
T  3347151 tagcaaaagttatcacaaaatggatgttcaaatatcatttctc 3347193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 24645540 - 24645431
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||||||| |||||||||||  || | |||||||||| || | ||||||||||||||||  ||||||||  ||||| ||||||| ||| |||| |||||     
T  24645540 agagaagtattatttgaacatccact-tggttgacaacttttatgacaaccataatttacaaagaaaaaataggtacttgcacgaaaaccaaaacaatag 24645442  T
Q  142 agagataaagt 152  Q
    |||||||||||    
T  24645441 agagataaagt 24645431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 149
Target Start/End: Original strand, 29633965 - 29634065
Alignment:
Q  48 gtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagat 147  Q
    ||||||||||||||| |||| | || |||||||| | ||||||||||| ||||  ||||||||   ||||||||||||||||||| | ||||| ||||||    
T  29633965 gtgttatttgaacaaccaatttagt-gacaatttatttgacaaccatattttacaaagaaaaaagtggtatttgcacggaaatcatatcaatagagagat 29634063  T
Q  148 aa 149  Q
    ||    
T  29634064 aa 29634065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 30863086 - 30863147
Alignment:
Q  167 agtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||| ||||||||||||||||||||||||| |||  |||||||| ||||| |||||||||||    
T  30863086 agtatgagagagaaagttgtcacaaaaattatcatcaaatggatgttcaaatatcatttctc 30863147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 36412303 - 36412198
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || |  | ||||||| || || |||||||||||||||  |||||| |  | ||||||||||| |||||||||||||| ||| |    
T  36412303 agtgttatttgaacaaccatttggtttgacaacttatgggacaaccataatttacaaagaaagaatatgtatttgcacgaaaatcaaagcaatagagaaa 36412204  T
Q  147 taaagt 152  Q
    ||||||    
T  36412203 taaagt 36412198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 3281608 - 3281752
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | |||||| ||| ||   ||||||||||||||||  ||||||||  ||||||||  ||  ||| ||||||||||||||||    
T  3281608 agtgttatttgaacaaccatt-tggttgtcaacttacatgacaaccataatttacaaagaaaaaataggtatttatacaaaaaccaaagcaataaagaga 3281706  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    ||||||       | |||||||||  |||||||||||||||||||||    
T  3281707 taaagt-aaaaagtaatgtgagtataagagagaaagttgtcacaaaa 3281752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 33796329 - 33796265
Alignment:
Q  165 tgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||| ||||||||||||||||||||||||||| |  |||| ||| | ||||||||||||||||    
T  33796329 tgagtatgagagagaaagttgtcacaaaaattgttagaaaatcgatatacaagtatcatttctct 33796265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 36122007 - 36121896
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||||||||| |||| |||| ||||| || | ||||||||||| ||||  ||||||||   |||||| ||||  |||||| ||||||    
T  36122007 aaagaggagtgttatttgaacaaccaatttggt-gacaacttatttgacaaccatattttacaaagaaaaatgtggtattggcacaaaaatcatagcaat 36121909  T
Q  140 aaagagataaagt 152  Q
    | |||||||||||    
T  36121908 agagagataaagt 36121896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 33374558 - 33374491
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| ||||||||||||| ||| |||||||||||  |||||| | ||||| ||||||||||||    
T  33374558 atgtgagtatgagagagaaagttatcataaaaattgtcataaaatggttattcaaatatcatttctct 33374491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 228
Target Start/End: Original strand, 46982795 - 46982973
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||  ||| ||| ||||||||| | ||||||| ||| ||||  ||||||||   |||||| |||||||||| | ||||||| ||| |    
T  46982795 agtgttatttgaacaactaatttgg-tgacaatttatttgacaactatattttacaaagaaaaaagtggtattagcacggaaataatagcaatagagata 46982893  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||       | || |||||| |||||||||| ||||  | |||||||||||||||| ||| ||||| |||||||||||    
T  46982894 taaagt-agaaagtaatatgagtatgagagagaaatttgttgc-aaaattgtcactaaatagatgttcaaatatcatttctc 46982973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 48405476 - 48405409
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| ||||||||||||||| |||||| ||||||| |||||| | | ||| ||||||||||||    
T  48405476 atgtgagtatgagagagaaagttgttacaaaagttgtcacaaaatggttgtacaaatatcatttctct 48405409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 229
Target Start/End: Original strand, 49983360 - 49983423
Alignment:
Q  166 gagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||| |||||||||||||||| ||||| |||| || |||||||| ||||| ||||||||||||    
T  49983360 gagtatgagagagaaagttgtcccaaaagttgtaaccaaatggatgttcaaatatcatttctct 49983423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 14207263 - 14207329
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||||||||||||||| |||| || |||| | | ||||| |||||||||||    
T  14207263 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatcgttgttcaaatatcatttctc 14207329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 14215011 - 14215077
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||||||||||||||| |||| || |||| | | ||||| |||||||||||    
T  14215011 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatcgttgttcaaatatcatttctc 14215077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 36671020 - 36671089
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    ||||||||| |||||| |||||||||||||||||||| |  |||||| | ||||| |||||||||||||||    
T  36671020 atgtgagtatgagagaaaaagttgtcacaaaaattgt-aaaaaatggttgttcaaatatcatttctctaaa 36671089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 55013188 - 55013079
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||||||||| |||| |||| |||||||| | |||||| |||| ||||  ||||||||   | ||||  |||||||| || ||||||    
T  55013188 aaagagcagtgttatttgaacaaccaatttggt-gacaatttatttgacaatcatattttacaaagaaaaaagtgatattgacacggaaaccatagcaat 55013090  T
Q  140 aaagagataaa 150  Q
    |||||||||||    
T  55013089 aaagagataaa 55013079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 16675457 - 16675522
Alignment:
Q  87 acaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagt 152  Q
    ||||||| ||||||  ||||||||| |  |||||||||| ||| ||||||||||||||||||||||    
T  16675457 acaaccacaatttacaaagaaaaagtatatatttgcacgaaaaacaaagcaataaagagataaagt 16675522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 30909084 - 30909027
Alignment:
Q  173 agagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||||||||  ||||| ||||||||||||| || ||||| |||||||||||||    
T  30909084 agagagaaagttgttgcaaaagttgtcactaaatgaatgttcaaatatcatttctcta 30909027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 18741290 - 18741119
Alignment:
Q  52 tatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaag 151  Q
    ||||||||||| || | |||| || ||||| || |||||||||||||||  ||||| ||| || ||||   ||| ||||||||||||||||||||||||     
T  18741290 tatttgaacaaccatt-tggtggataatttatgggacaaccataatttacaaagaagaagtagatattgatacgaaaatcaaagcaataaagagataaaa 18741192  T
Q  152 tnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttc 226  Q
    |       | ||||||||| || ||||||| |||| ||||||||| |||  |||| ||| ||||| |||||||||    
T  18741191 t--aaaaataatgtgagtatgaaagagaaaattgttacaaaaattatcaaaaaattgatgttcaaatatcatttc 18741119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 27168690 - 27168754
Alignment:
Q  165 tgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||| ||||||||||||||||||||||||| | |  |||||| | ||||| ||||||||||||    
T  27168690 tgagtatgagagagaaagttgtcacaaaaattattaaaaaatggttgttcaaatatcatttctct 27168754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 42889041 - 42888981
Alignment:
Q  172 gagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    |||||||||||||||||||||||||||||  |||||| | ||| | ||| |||||||||||    
T  42889041 gagagagaaagttgtcacaaaaattgtcaaaaaatggttgttcgaatattatttctctaaa 42888981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 228
Target Start/End: Complemental strand, 48353097 - 48352996
Alignment:
Q  127 aaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttc 226  Q
    |||||||||||||| ||||| |||||       | || |||||| |||||||||||||||||||||| |||| |  |||||||| | ||| |||||||||    
T  48353097 aaatcaaagcaatagagagagaaagtaaaaatataatatgagtatgagagagaaagttgtcacaaaagttgttaaaaaatggatgtacaaatatcatttc 48352998  T
Q  227 tc 228  Q
    ||    
T  48352997 tc 48352996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 51973260 - 51973439
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||  ||| |||| |||||||| | ||||||||||||||||  |||||||| |  |||||  ||   ||| || | ||||| |||||    
T  51973260 agtgttatttgaacaactaatttggt-gacaatttatttgacaaccataatttacaaagaaaaaaatagtattgacataaaaaccataacaatagagaga 51973358  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||       | |||| |||| | |||||||||||||||||||| |||| || |||||||| ||||| ||||||||||||    
T  51973359 taaagttaaaaa-taatgtaagtatgggagagaaagttgtcacaaaagttgt-accaaatggatgttcaaatatcatttctct 51973439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 228
Target Start/End: Complemental strand, 52714834 - 52714733
Alignment:
Q  127 aaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttc 226  Q
    |||||||||||||| ||||| |||||       | |||| |||| ||||||||||||| ||||||||||||| |  |||||||| | ||| |||||||||    
T  52714834 aaatcaaagcaatagagagagaaagtaaaaatataatgtaagtatgagagagaaagttatcacaaaaattgttagaaaatggatgtacaaatatcatttc 52714735  T
Q  227 tc 228  Q
    ||    
T  52714734 tc 52714733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 108496 - 108430
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| ||||||||||||||||| |||||||||||| || ||| | | ||| ||||||||||||    
T  108496 atgtgagtatgagagagaaagttgtca-aaaaattgtcacaaagtggttgtacaaatatcatttctct 108430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 16479697 - 16479631
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| |||||||||||||||||||||| |||| || |||||| | | ||| ||||||||||||    
T  16479697 atgtgagtatgagagagaaagttgtcacaaaagttgt-acaaaatggttgtacaaatatcatttctct 16479631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 228
Target Start/End: Complemental strand, 22371370 - 22371191
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||  ||| |||| |||||||| | |||||| |||| | ||  ||||||||   |||||| |||  |||| || ||||||| |||||    
T  22371370 agtgttatttgaacaactaatttggt-gacaatttatttgacaatcatactctacaaagaaaaaattggtattggcaaagaaaccatagcaatagagaga 22371272  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||       | |||| |||| |||||||||| || | |||||| || ||||||||||||| ||||| |||||||||||    
T  22371271 taaagtaaaaaa-taatgtaagtatgagagagaaaattattacaaaagttatcactaaatggatgttcaaatatcatttctc 22371191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 229
Target Start/End: Original strand, 31350615 - 31350678
Alignment:
Q  166 gagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||| |||||||| |||||||||||||||||| |  |||||||| || || ||||||||||||    
T  31350615 gagtatgagagagagagttgtcacaaaaattgttaaaaaatggatgttaaaatatcatttctct 31350678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 148
Target Start/End: Original strand, 35201426 - 35201531
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| ||||||||||||||||||||| ||| |||||| || | |||||| |||||||||  ||||||||| | |||||  |||| ||| || |||||||    
T  35201426 aagaggagtgttatttgaacaatcaatttgg-tgacaacttatttgacaatcataatttacaaagaaaaagta-gtattgacacgaaaaccatagcaata 35201523  T
Q  141 aagagata 148  Q
     |||||||    
T  35201524 gagagata 35201531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 37894248 - 37894315
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| |||||||||||||||||||||| |||| |  |||||| | | ||| ||||||||||||    
T  37894248 atgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctct 37894315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 38926693 - 38926619
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaagtaaa 237  Q
    ||||||||| |||||||||||||||||||||  |||| |  |||||| | ||||| |||||||||||||| |||||    
T  38926693 atgtgagtatgagagagaaagttgtcacaaacgttgt-aaaaaatggttgttcaaatatcatttctctaatgtaaa 38926619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 53932397 - 53932463
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| ||||| |||||||||| ||||||||||||| |||||| | | ||| ||||||||||||    
T  53932397 atgtgagtatgagagtgaaagttgtc-caaaaattgtcacaaaatggttgtacaaatatcatttctct 53932463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 4494242 - 4494308
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||||||  |||||||||||||||||||||||| |||  |||| | | ||||| |||||||||||    
T  4494242 atgtgagtataagagagaaagttgtcacaaaaattatcaaaaaatagttattcaaatatcatttctc 4494308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 11327173 - 11327108
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| ||||||||||||||| |||||| ||||||| |||||| | | ||| |||||||||||    
T  11327173 atgtgagtatgagagagaaagttgt-acaaaagttgtcacaaaatggttgtacaaatatcatttctc 11327108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 26014877 - 26014812
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||||||||||||||| |||| |  |||||| | ||||| |||||||||||    
T  26014877 atgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttctc 26014812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 33375926 - 33375860
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||| ||||   |||| |||||||||||||||| || || |||||||||||    
T  33375926 atgtgagtatgagagagaaaattgttgtaaaagttgtcactaaatggatgttgaaatatcatttctc 33375860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 196
Target Start/End: Complemental strand, 38671683 - 38671649
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaatt 196  Q
    |||||||||||||||||||| ||||||||||||||    
T  38671683 atgtgagtacgagagagaaaattgtcacaaaaatt 38671649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 45055040 - 45054974
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| ||  ||||||||||| |||||| ||||||  |||||||| ||||| |||||||||||    
T  45055040 atgtgagtatgaacgagaaagttgtaacaaaagttgtcagaaaatggatgttcaaatatcatttctc 45054974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 48893525 - 48893420
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaa--ggtatttgcacggaaatcaaagcaataaaga 144  Q
    ||||||||||||||| ||| |  || ||||||||| ||| ||||||| ||||||| |||||||| ||   |||||| |||| ||| |||||||||| | |    
T  48893525 agtgttatttgaacattcatttggggtgacaatttatgtaacaaccacaatttataaagaaaaaaaaatagtatttacacgaaaaccaaagcaatagaaa 48893426  T
Q  145 gataaa 150  Q
    ||||||    
T  48893425 gataaa 48893420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 7294105 - 7294174
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    ||||||||| ||||||||||||||||  | || ||||||| || ||||| | ||| ||||||||||||||    
T  7294105 atgtgagtatgagagagaaagttgtctaagaagttgtcacaaagtggatgtacaaatatcatttctctaa 7294174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 9862589 - 9862532
Alignment:
Q  172 gagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||||||||||||||| ||| ||  |||||| | ||||| ||||||||||||    
T  9862589 gagagagaaagttgtcacaaaagttgacaaaaaatggttgttcaaatatcatttctct 9862532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 26550303 - 26550226
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaagtaaatt 239  Q
    |||||| || ||||||||||||||||||||||||| | |  |||||| | | ||| |||||||||||| |||| ||||    
T  26550303 atgtgaatatgagagagaaagttgtcacaaaaattattaaaaaatggttgtgcaaatatcatttctcttaagttaatt 26550226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 5244294 - 5244258
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  5244294 atgtgagtatgagagagaaagttgtcacaaaagttgt 5244258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 29917029 - 29917065
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  29917029 atgtgagtatgagagagaaagttgtcacaaaagttgt 29917065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 29966182 - 29966218
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  29966182 atgtgagtatgagagagaaagttgtcacaaaagttgt 29966218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 32981127 - 32981194
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||| ||||||||||||||||  |||| |||||||||||||| | | ||| ||| |||||||||    
T  32981127 atgtgagtatgagagagaaagttgtc-taaaagttgtcactaaatggttgtacaaatataatttctcta 32981194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 33389070 - 33389038
Alignment:
Q  166 gagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||| |||||||||||||||||||||||||||    
T  33389070 gagtatgagagagaaagttgtcacaaaaattgt 33389038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 34456853 - 34456789
Alignment:
Q  165 tgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||| ||||||||||||| |||||||| ||||||  || ||| | ||||| ||||||||||||    
T  34456853 tgagtatgagagagaaagttatcacaaaagttgtcaaaaagtggttattcaaatatcatttctct 34456789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 35376560 - 35376623
Alignment:
Q  165 tgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||| ||||||||||||||||  |||||||||||| |||||| | | ||| ||||||||||||    
T  35376560 tgagtatgagagagaaagttgtct-aaaaattgtcacaaaatggttgtacaaatatcatttctct 35376623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 35597227 - 35597191
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  35597227 atgtgagtatgagagagaaagttgtcactaaaattgt 35597191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 152
Target Start/End: Original strand, 41281606 - 41281717
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||||||||||| || |||||||||| || ||  ||||| | ||||||  || |||||| ||| ||||||||  ||| |||| ||||    
T  41281606 aaagaggagtgttatttgaacaatc-atttggttgacaacttatggaacaactaaaatttacaaaaaaaaagtaggcatttgcacaaaaaccaaaacaat 41281704  T
Q  140 aaagagataaagt 152  Q
    | ||| |||||||    
T  41281705 agagaaataaagt 41281717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 41505556 - 41505520
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  41505556 atgtgagtatgagagagaaagttgtcacaaaagttgt 41505520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 44413926 - 44413962
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  44413926 atgtgagtatgagagagaaagttgtcacaaaagttgt 44413962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 44813199 - 44813163
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  44813199 atgtgagtatgagagagaaagctgtcacaaaaattgt 44813163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 45186557 - 45186593
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||| | |||||||||||||||||||||||||||    
T  45186557 atgtgagcatgagagagaaagttgtcacaaaaattgt 45186593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 45293034 - 45293070
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  45293034 atgtgagtatgagagagaaagttgtcacaaaagttgt 45293070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 48152291 - 48152359
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||| |||||| |||||||||||| | |||||||| |||||| | |  || |||||||||||||    
T  48152291 atgtgagtatgagagataaagttgtcacatagattgtcacaaaatggttgtcaaaatatcatttctcta 48152359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 53718110 - 53718049
Alignment:
Q  165 tgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||| |||||||||||||||||  ||| ||||||| |||||||| || || |||||||||||    
T  53718110 tgagtatgagagagaaagttgtca--aaagttgtcacaaaatggatgtttaaatatcatttctc 53718049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 105)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 228
Target Start/End: Original strand, 18876806 - 18876993
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||| |||||||||||| ||| | |||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  18876806 aagaggagtgatatttgaacaattaatttagttgacaacttgtgtgacaaccataatttataaagaaaaagtaggtatttgcacggaaaccaaagcaata 18876905  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
     |||||||||||       |||||||| || ||||||||||||||||||||||||| | || |||| ||| ||||| |||||||||||    
T  18876906 gagagataaagtaaaaaaattatgtgaatatgagagagaaagttgtcacaaaaattattaccaaatagatgttcaaatatcatttctc 18876993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 2221172 - 2220992
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||| ||| | |||||||| || ||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  2221172 agtgttatttgaacaat-aattttgttgacaacttatgtgataaccataatttataaagaaaaagtaggtatttgcacggaaatcaaagcaatagagaga 2221074  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||       | ||||||||| ||||||||||||| |||||||||||||||| |||| ||| ||||| ||| ||||||||    
T  2221073 taaagt-gaaaaataatgtgagtatgagagagaaagttatcacaaaaattgtcacaaaatagatgttcaaatattatttctct 2220992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 42 - 229
Target Start/End: Original strand, 4061849 - 4062031
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| ||||||||| ||||||  ||| || |||||||||| ||||||||||||||||||| ||||||||| | ||||||||||||||| |||| |||||     
T  4061849 agaggagtgttattcgaacaactaatttgattgacaattt-tgtgacaaccataatttataaagaaaaagtatgtatttgcacggaaaccaaaacaatag 4061947  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||||       | || |||||| |||||||  |||||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  4061948 agagataaagt--aaaaataatatgagtatgagagag--agttgtcacaaaaattgtcattaaatggatgttcaaatatcatttctct 4062031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 228
Target Start/End: Complemental strand, 15270046 - 15269861
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| ||||||||||||||| || || ||||||| || || | ||| ||||||||||||  ||||||||| ||||||||||||| ||||||||||||||    
T  15270046 aagaggagtgttatttgaaca-tccatttggttgataacttttatgataaccataatttacaaagaaaaagtaggtatttgcacgaaaatcaaagcaata 15269948  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
     |||||||||||       | |||||| || || ||||||||||||||||||||||||||  |||||||| ||||| |||||||||||    
T  15269947 gagagataaagt-aaaaagtaatgtgaatatgaaagagaaagttgtcacaaaaattgtcataaaatggatgttcaaatatcatttctc 15269861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 86 - 228
Target Start/End: Complemental strand, 18723735 - 18723594
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    |||||||||||||| | |||||| |  ||||||||||||| ||||||||||||||||||||||||||       | ||||||||| ||||||||||||||    
T  18723735 gacaaccataatttgtaaagaaagaataggtatttgcacgaaaatcaaagcaataaagagataaagtaaaaaa-taatgtgagtatgagagagaaagttg 18723637  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    | |||||||||||||| |||||||| ||||| |||||||||||    
T  18723636 taacaaaaattgtcacaaaatggatgttcaaatatcatttctc 18723594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 6998952 - 6999139
Alignment:
Q  39 taaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaa 138  Q
    ||||||| |||||||||| ||||| || | |||||||||| || |  |||||||||||||||| ||||||||   |||||||||||| ||| ||||||||    
T  6998952 taaagaggagtgttatttaaacaaccatt-tggttgacaacttttaggacaaccataatttataaagaaaaaattggtatttgcacgaaaaccaaagcaa 6999050  T
Q  139 taaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    || |||||||||||       | ||||||||| |||||||||||||||||||||| ||||||  |||||||| ||||| |||||||||||    
T  6999051 tagagagataaagt-aaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctc 6999139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 189
Target Start/End: Complemental strand, 42678935 - 42678788
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaa-gaaggtatttgcacggaaatcaaagcaat 139  Q
    ||||| ||||||||||||||||||||  ||||||||||||| ||||||||||||||||||  |||||||| | ||||||||||||||||| |||||||||    
T  42678935 aagaggagtgttatttgaacaatcaaattggttgacaattt-tgtgacaaccataatttacaaagaaaaaagtaggtatttgcacggaaaccaaagcaat 42678837  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcac 189  Q
    | |||||||||||       | ||||||||| ||||||||||||||||||    
T  42678836 agagagataaagt-aaaaaataatgtgagtatgagagagaaagttgtcac 42678788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 41 - 229
Target Start/End: Original strand, 9634322 - 9634508
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||||||||||||||||||||||| | |||||||||| || |   ||||||||||||||  |||||||||  |||||||||||| ||| |||| |||||    
T  9634322 aagagaagtgttatttgaacaatcatt-tggttgacaactttttgaacaaccataatttacaaagaaaaagttggtatttgcacgaaaaccaaaacaata 9634420  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
     |||||||||||       | ||||||||| |||||| |||||||||||||||||| |||  |||||||| ||||| ||||||||||||    
T  9634421 tagagataaagt-aaaaagtaatgtgagtatgagagaaaaagttgtcacaaaaattatcataaaatggatgttcaaatatcatttctct 9634508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 42 - 193
Target Start/End: Complemental strand, 5054792 - 5054643
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||||||||||||||||| || | || |||||||||| || ||||||||| ||||||||  ||||||||| ||||||||||||| ||||||||||||||     
T  5054792 agagaagtgttatttgaataa-ctatttggttgacaacttatgtgacaacaataatttacaaagaaaaagtaggtatttgcacgaaaatcaaagcaatag 5054694  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    |||||||||||       | ||||||||| |||||| |||||||||||||||    
T  5054693 agagataaagt-aacacataatgtgagtatgagagaaaaagttgtcacaaaa 5054643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 41 - 228
Target Start/End: Complemental strand, 28245912 - 28245728
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    |||||||||||||||||||||| || | |||||||||| || ||  |||||| |||||||  |||||||| | |||||||||||| ||| ||||||||||    
T  28245912 aagagaagtgttatttgaacaaccatt-tggttgacaacttttgaaacaaccttaatttacaaagaaaaata-ggtatttgcacgaaaaccaaagcaata 28245815  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
     |||||||||||       | ||||||||| |||||||||||||||||||||| ||||| | |||| ||| ||||| |||||||||||    
T  28245814 gagagataaagt-aaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgtcgcaaaatagatgttcaaatatcatttctc 28245728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 39449446 - 39449266
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||| ||||| || | || |||||||||| ||  |||||||| |||||| |||||||||  |||||||||||| |||||||||||||| |||||    
T  39449446 agtgttatttaaacaaccatt-tgattgacaatttttggaacaaccatcatttataaagaaaaagttggtatttgcacgaaaatcaaagcaatagagaga 39449348  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||       | || |||||| |||||||||||||||  ||||| ||||||| |||||||| ||||| ||||||||||||    
T  39449347 taaagt-aaaaagtaatctgagtatgagagagaaagttgttgcaaaagttgtcacaaaatggatattcaaatatcatttctct 39449266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 6896038 - 6895895
Alignment:
Q  83 tgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaag 182  Q
    ||||||||||||||||||  ||||||||| | |||||||||| ||||||||| ||||| ||| |||||||       | |||||||||  ||||||||||    
T  6896038 tgtgacaaccataatttacaaagaaaaagtaagtatttgcacagaaatcaaaacaatagagaaataaagtaaaaa--tgatgtgagtataagagagaaag 6895941  T
Q  183 ttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||||||||||||  |||||||| ||||| |||||||||||    
T  6895940 ttgtcacaaaaattgtcaacaaatggatattcaaatatcatttctc 6895895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 227
Target Start/End: Original strand, 13347706 - 13347885
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaa-aagaaggtatttgcacggaaatcaaagcaataaagag 145  Q
    |||||||||||||||| || | ||||||||||||| || |||||||||||||||  || ||| |||  |||| ||||||| ||| |||||||||| ||||    
T  13347706 agtgttatttgaacaaccatt-tggttgacaatttttgggacaaccataatttacaaaaaaataagttggtaattgcacgaaaaccaaagcaatagagag 13347804  T
Q  146 ataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
    |||||||       | ||||||||| |||||||||||||||  ||||||||||||| |||||||| ||||| ||||||||||    
T  13347805 ataaagtaaaaag-taatgtgagtatgagagagaaagttgttgcaaaaattgtcacaaaatggatgttcaaatatcatttct 13347885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 215
Target Start/End: Complemental strand, 29361204 - 29361033
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| ||||||||||||||||||||| | ||| | || |||| ||||||| ||||||||| ||||||||| ||||||||| ||  ||||||||||||||     
T  29361204 agaggagtgttatttgaacaatcaatttagttaataacttgtctgacaac-ataatttataaagaaaaagtaggtatttgtacaaaaatcaaagcaatag 29361106  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttca 215  Q
    |||||||||||       ||||||||||| || ||||||| || |||||||| ||||||| |||||||| ||||    
T  29361105 agagataaagt-aaaaatttatgtgagtatgaaagagaaaattatcacaaaagttgtcaccaaatggatgttca 29361033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 32870012 - 32869829
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||||||||| || | ||||||||||||| || |||||||||||||||  ||||||||   |||||||||||| ||| |||||||||    
T  32870012 aaagaggagtgttatttgaacaaccatt-tggttgacaatttttgggacaaccataatttacaaagaaaaaattggtatttgcacgaaaaccaaagcaat 32869914  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcattt 225  Q
    |||||||||||||       | |||| | || || |||||||||||||||||||||| |||  ||||| || ||||| ||||||||    
T  32869913 aaagagataaagt-aaaaaataatgtaaatatgaaagagaaagttgtcacaaaaattatcataaaatgaatgttcaaatatcattt 32869829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 189
Target Start/End: Complemental strand, 42372665 - 42372518
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||||||||||||||||||||||||| ||||| |||| |  | ||||| ||||||||||   |||||| | ||||||||||||||||||||||| ||||    
T  42372665 aagagaagtgttatttgaacaatcaatttggttaacaactc-tctgacagccataatttacagagaaaaggtaggtatttgcacggaaatcaaaggaata 42372567  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcac 189  Q
     |||||||||||       | ||||||||| ||||||||||||||||||    
T  42372566 gagagataaagtaaaaaaataatgtgagtatgagagagaaagttgtcac 42372518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 40 - 228
Target Start/End: Complemental strand, 6170816 - 6170630
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||||||||| || | |||||||||| || |  |||||||||||||||| || |||||   |||||||||||| ||| |||||||||    
T  6170816 aaagaggagtgttatttgaacaaccatt-tggttgacaacttttaggacaaccataatttataaaaaaaaaattggtatttgcacgaaaaccaaagcaat 6170718  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    | |||||||||||       | | ||||||| |||||||||||||||||||||| ||||||  |||||||| || || |||||||||||    
T  6170717 agagagataaagt-aaaaagtaacgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttgaaatatcatttctc 6170630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 28679495 - 28679315
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| ||||  |||| || | ||||||||||||||||| ||||||||| | |||||  || |||||||| ||||||| |||||    
T  28679495 agtgttatttgaacaaccaatttggtc-acaacttatttgacaaccataatttataaagaaaaagta-gtattgacatggaaatcatagcaatagagaga 28679398  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||       | ||||| ||| |||||||||||||||| ||||| ||||||| |||||||| ||||| ||| ||||||||    
T  28679397 taaagtaaaaatataatgtgtgtatgagagagaaagttgtcgcaaaagttgtcaccaaatggatgttcaaatattatttctct 28679315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 7648569 - 7648391
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| ||||||| || || ||  |||| |||||||||  |||||||||||| |||||||||  ||| |||| ||||| |||||    
T  7648569 agtgttatttgaacaaccaatttggttgataacttatgcaacaatcataatttacaaagaaaaagaag-tatttgcacaaaaaccaaaacaatagagaga 7648471  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||       | || |||||| |||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||||    
T  7648470 taaagtaaaaa--tgatatgagtatgagagaaaaagttgtcacaaaaattgtcac-aaatggatgttcaaatatcatttctct 7648391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 13765587 - 13765400
Alignment:
Q  39 taaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaa 138  Q
    ||||||| |||||||||||||||| || | |||||||||| || || |||||||||||||||  || ||||||  |||||||||||| ||| ||||||||    
T  13765587 taaagaggagtgttatttgaacaaccatt-tggttgacaacttttgggacaaccataatttacaaataaaaagttggtatttgcacgaaaaccaaagcaa 13765489  T
Q  139 taaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |  | |||||||||       | |  |||||| |||||||||||||||||||||| ||||||  |||||||| ||||| |||||||||||    
T  13765488 tcgaaagataaagt-aaaaagtaacatgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctc 13765400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 230
Target Start/End: Complemental strand, 18177119 - 18176938
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||||||| |||| ||||| || | ||||||||||| ||||  ||||||||   | |||| ||||||||| || ||||||| |||||    
T  18177119 agtgttatttgaacaatcaatttggt-gacaacttatttgacaaccatattttacaaagaaaaaagtgatattggcacggaaaccatagcaatagagaga 18177021  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    |||||        | ||||||||| |||||||||||||||  ||||| |||||||||||| ||| ||||| |||||||||||||    
T  18177020 taaag-aaaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatagatgttcaaatatcatttctcta 18176938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 40936981 - 40937100
Alignment:
Q  73 tgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacg 172  Q
    ||||||||| ||||||||||||||||||  |||||||||  |||||||||||| |||||||||||||| |||||||||||       | ||||||||| |    
T  40936981 tgacaatttatgtgacaaccataatttacaaagaaaaagtgggtatttgcacgaaaatcaaagcaatagagagataaagt-aaaaaataatgtgagtatg 40937079  T
Q  173 agagagaaagttgtcacaaaa 193  Q
    |||||||||||| ||||||||    
T  40937080 agagagaaagttatcacaaaa 40937100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 47 - 225
Target Start/End: Complemental strand, 2563883 - 2563707
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||||| | |||||||||| || |  ||||| |||||||||| |||||||||  |||||||||||| ||| |||| ||||| | |||    
T  2563883 agtgttatttgaacaatcatt-tggttgacaacttttaggacaatcataatttataaagaaaaagttggtatttgcacgaaaaccaaaacaatagaaaga 2563785  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcattt 225  Q
    ||||||         |||| |||| |||||||||||||||||||||| ||||||  |||||||| ||||| ||||||||    
T  2563784 taaagtaaaaaga-aatgtaagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcattt 2563707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 229
Target Start/End: Original strand, 670358 - 670539
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| |||| || | ||||| || | ||||||||||| ||||  |||||||| | ||||||  ||||||||||| |||||||    
T  670358 aagaggagtgttatttgaacaaccaatttgat-gacaacttatttgacaaccatattttacaaagaaaaaaatggtattgacacggaaatcatagcaata 670456  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
     |||||||||         | |||||||||  || ||||||||||| |||||| |||||||||||||||| ||||| ||||||||||||    
T  670457 gagagataaa------aagtaatgtgagtataagcgagaaagttgttacaaaagttgtcactaaatggatgttcaaatatcatttctct 670539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 193
Target Start/End: Original strand, 23352792 - 23352941
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||||||||| || | |||||||||| || || |||||||||||||||  ||||||||| | ||||||||||| ||| |||||||||    
T  23352792 aaagaggagtgttatttgaacaaccatt-tggttgacaacttatgggacaaccataatttacaaagaaaaagtatgtatttgcacgaaaaccaaagcaat 23352890  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
      |||||||||||       | ||||||||| ||||||||||||||||||||||    
T  23352891 --agagataaagt-aaaaaataatgtgagtatgagagagaaagttgtcacaaaa 23352941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 42 - 227
Target Start/End: Complemental strand, 434034 - 433851
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| ||||||||||||||||||||| | || ||||| || | ||||||||||| ||||  ||||||||   ||||||  ||||||||||| |||||||     
T  434034 agaggagtgttatttgaacaatcaattttgt-gacaacttatttgacaaccatactttacaaagaaaaaagtggtattgacacggaaatcatagcaatag 433936  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
    |||||||||||       | ||||||||| |||||||||||||||  |||||||| ||||| |||| || ||||| ||||||||||    
T  433935 agagataaagt-aaaaaatgatgtgagtatgagagagaaagttgttgcaaaaattatcacttaatgaatgttcaaatatcatttct 433851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 29712120 - 29711978
Alignment:
Q  85 tgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagtt 184  Q
    ||||||||||||||||  ||||||||| |||||||||||   ||| |||||||||| |||||||||||       | ||||||||| |||||| || |||    
T  29712120 tgacaaccataatttacaaagaaaaagtaggtatttgcataaaaaccaaagcaatagagagataaagtaaaaag-taatgtgagtatgagagaaaaggtt 29712022  T
Q  185 gtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| ||||||| |||||||| ||||| ||||||||||||    
T  29712021 gtcacaaaa-ttgtcacaaaatggatgttcaaatatcatttctct 29711978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 225
Target Start/End: Complemental strand, 37105817 - 37105644
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| | || |||||||||| || ||||||||||||||||||  |||||||||  ||||| |||||| |||  ||||||||| | |||    
T  37105817 agtgttatttgaacaa-ctatttggttgacaacttttgtgacaaccataatttacaaagaaaaagttggtatgtgcacgaaaacgaaagcaatagaaaga 37105719  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcattt 225  Q
    ||||||         |||| |||| || |||||||||||||||||||||| |||  |||||||| ||||| ||||||||    
T  37105718 taaagtaaaaa----atgttagtatgaaagagaaagttgtcacaaaaattatcataaaatggatgttcaaatatcattt 37105644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 229
Target Start/End: Original strand, 5200125 - 5200297
Alignment:
Q  54 tttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtn 153  Q
    |||||||||| ||| |||| ||||| || | ||||||||||||||||  ||||||||| || |||| |||||||||||| ||||||||| |||||||||     
T  5200125 tttgaacaattaatttggt-gacaacttatttgacaaccataatttacaaagaaaaagtag-tattggcacggaaatcatagcaataaaaagataaagt- 5200221  T
Q  154 nnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
          | |||| | || || ||||||| |||||||||||||||| ||||||||||| ||||| |||| |||||||    
T  5200222 aaaaaatgatgtaaatatgatagagaaaattgtcacaaaaattgttactaaatggatgttcaaatatcctttctct 5200297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 225
Target Start/End: Original strand, 22525888 - 22526062
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | || |||| || || || |||||||||||||||  ||||||||| ||| ||||||||| |||||||||||||  |||||    
T  22525888 agtgttatttgaacaaccatt-tgattgataacttttgagacaaccataatttacaaagaaaaagtaggcatttgcacgaaaatcaaagcaat--agaga 22525984  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcattt 225  Q
    ||||||       | |||||| ||  | ||||||||||||||||||||||||||  |||||||| ||||| ||||||||    
T  22525985 taaagt-aaaaaataatgtgaatataaaagagaaagttgtcacaaaaattgtcaaaaaatggatgttcaaatatcattt 22526062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 230
Target Start/End: Original strand, 35589302 - 35589460
Alignment:
Q  71 gttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagta 170  Q
    ||||| ||||| || |||||||||||||||  |||||||||  | |||||||||| ||| |||| ||||| |||||||||||       | |||||||||    
T  35589302 gttgataatttttgggacaaccataatttacaaagaaaaagttgatatttgcacgaaaaccaaaacaatagagagataaagtaaaaag-taatgtgagta 35589400  T
Q  171 cgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
     |||||||||| ||||  ||||| ||||||| |||||||| ||||| |||||||||||||    
T  35589401 tgagagagaaaattgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctcta 35589460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 229
Target Start/End: Complemental strand, 36803037 - 36802895
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    |||||||||||||| | |||||| |  ||||||||||||  ||||||||| |||| |||||||||||       | ||||||||| ||||||||||||||    
T  36803037 gacaaccataatttgtaaagaaagaataggtatttgcacaaaaatcaaagtaatagagagataaagtaaaaaa-taatgtgagtatgagagagaaagttg 36802939  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |  ||||| ||||||| |||||||| ||||| ||||||||||||    
T  36802938 tagcaaaagttgtcacaaaatggatgttcaaatatcatttctct 36802895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 228
Target Start/End: Original strand, 44711926 - 44712060
Alignment:
Q  93 ataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaa 192  Q
    ||||||||| |||||| |  ||||||||||||| |||||||||||||| |||||||||||       |  |||||||| || ||||||||||||  ||||    
T  44711926 ataatttataaagaaagaataggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaa-tagtgtgagtatgaaagagaaagttgtagcaaa 44712024  T
Q  193 aattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||| ||||| |||||||||||    
T  44712025 aattgtcacaaaatggatgttcaaatatcatttctc 44712060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 87 - 229
Target Start/End: Complemental strand, 2841974 - 2841833
Alignment:
Q  87 acaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgt 186  Q
    ||||||||||||||| |||||| |  || |||||||||| |||||||||||| | |||||||||||       | ||||||||| |||| ||||||||||    
T  2841974 acaaccataatttataaagaaagaatagatatttgcacgaaaatcaaagcaacagagagataaagtaaaaaa-taatgtgagtatgagaaagaaagttgt 2841876  T
Q  187 cacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
     |||||| ||||||| ||||||||  |||| ||||||||||||    
T  2841875 aacaaaagttgtcacaaaatggatgatcaaatatcatttctct 2841833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 152
Target Start/End: Original strand, 17898118 - 17898230
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||||||| | |||| |||||||||| || |  || ||||||||||||  |||||| || || || |||||||||||||||||||||    
T  17898118 aaagaggagtgttatttgaaccaccaatttggttgacaacttatcggataaccataatttacaaagaaatagtagttagttgcacggaaatcaaagcaat 17898217  T
Q  140 aaagagataaagt 152  Q
    | |||||||||||    
T  17898218 agagagataaagt 17898230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 7574620 - 7574510
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    |||||||||||||||||||||| || | ||||||||||||| ||  ||||| ||||||||  | ||||||  ||||||||||||| ||||||||| ||||    
T  7574620 aagagaagtgttatttgaacaaccatt-tggttgacaatttttggaacaactataatttacaaggaaaaaataggtatttgcacgaaaatcaaagtaata 7574522  T
Q  141 aagagataaagt 152  Q
     |||||||||||    
T  7574521 gagagataaagt 7574510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 228
Target Start/End: Complemental strand, 25881719 - 25881544
Alignment:
Q  51 ttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaa 150  Q
    |||||||||||| || | |||||||||| || ||  ||| ||||||||||  ||||||||  ||||||||  ||| ||| |||||||| | |||||||||    
T  25881719 ttatttgaacaaccatt-tggttgacaacttttgaaacagccataatttacaaagaaaaaataggtatttatacgaaaaccaaagcaacagagagataaa 25881621  T
Q  151 gtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||       | ||||||||| |||||||||||||||||||||||||||| | |||| ||| ||||| |||||||||||    
T  25881620 gtaaaaaa-taatgtgagtatgagagagaaagttgtcacaaaaattgtcgcaaaatagatgttcaaatatcatttctc 25881544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 230
Target Start/End: Original strand, 12498536 - 12498709
Alignment:
Q  54 tttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtn 153  Q
    ||||||||| |||| | ||||||||||  |||||||| |||||||||  |||||||| | |||||||||||| ||| |||  ||||| ||||||||| |     
T  12498536 tttgaacaaccaatttagttgacaatta-tgtgacaatcataatttacaaagaaaaata-ggtatttgcacgaaaaccaagacaatagagagataaaata 12498633  T
Q  154 nnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
          | || |||||| |||||| |||||||||||||||||||| || |||||||| ||||| |||||||||||||    
T  12498634 aaaaa-taatatgagtatgagagaaaaagttgtcacaaaaattgttaccaaatggatgttcaaatatcatttctcta 12498709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 47 - 226
Target Start/End: Complemental strand, 35705672 - 35705496
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||||||| ||| ||||||||| | | ||||||||||||||  ||||||||| | |||||  |||| ||| || |||||||||||||    
T  35705672 agtgttatttgaacaatcaatttgg-tgacaatttatttaacaaccataatttacaaagaaaaagta-gtattgacacgaaaaccatagcaataaagaga 35705575  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttc 226  Q
    ||||||       | ||||||||| |||||||||| || ||| |||| ||||||| |||| ||| ||||| ||| |||||    
T  35705574 taaagt-aaaatataatgtgagtatgagagagaaaattatcataaaagttgtcaccaaatagatgttcaaatataatttc 35705496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 36211952 - 36212056
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | ||||||| || || |||||||| |||||||||| ||||||||| |  |||||||||| ||||||||| |||| |||||    
T  36211952 agtgttatttgaacaaccatt-tggttgataaattatgtgacaatcataatttataaagaaaaagtaaatatttgcacgaaaatcaaagtaatagagaga 36212050  T
Q  147 taaagt 152  Q
    ||||||    
T  36212051 taaagt 36212056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 228
Target Start/End: Complemental strand, 20911977 - 20911801
Alignment:
Q  51 ttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaa 150  Q
    |||||| |||||||||| | |||||||  |  | ||||||||||| ||||  ||||||||  || |||||||||||||| |||||||||| |||||||||    
T  20911977 ttatttcaacaatcaatttagttgacagctgatatgacaaccatattttacaaagaaaaaatagatatttgcacggaaaccaaagcaatagagagataaa 20911878  T
Q  151 gtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||       | || |||||| |||||||||| || |||||||| |||| || ||||| || ||||| |||||||||||    
T  20911877 gtaaaaaaataatttgagtatgagagagaaa-ttatcacaaaagttgttaccaaatgaatgttcaaatatcatttctc 20911801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 227
Target Start/End: Complemental strand, 26206989 - 26206848
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa-agagataaagtnnnnnnnttatgtgagtacgagagagaaagtt 184  Q
    ||||| |||||||| | |||||| |  ||||||||||||| ||||||||||||||| |||||||||||       | ||||||||| |||||||||||||    
T  26206989 gacaatcataatttgtaaagaaagaataggtatttgcacgaaaatcaaagcaataagagagataaagtaaaaaa-taatgtgagtatgagagagaaagtt 26206891  T
Q  185 gtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
     | |||||||||||||  |||| ||| ||||| ||||||||||    
T  26206890 ataacaaaaattgtcataaaatagatgttcaaatatcatttct 26206848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 226
Target Start/End: Original strand, 14233606 - 14233788
Alignment:
Q  43 gagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaaga-aggtatttgcacggaaatcaaagcaataa 141  Q
    |||||||||||||||||||| || | || ||||||| ||    |||||||||||||||  |||||||||  |  |||||||||  ||| ||||||||||     
T  14233606 gagaagtgttatttgaacaaccattttg-ttgacaacttacaagacaaccataatttacaaagaaaaagttaaatatttgcacaaaaaccaaagcaatag 14233704  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttc 226  Q
    |||||||||||       | || |||||| |||||||||| ||||||||||| ||||||| |||||||| ||||| |||||||||    
T  14233705 agagataaagtaaaaag-taatatgagtatgagagagaaatttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttc 14233788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 30977954 - 30977888
Alignment:
Q  163 tgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||| ||||||||||||||||| |||| ||||||| |||||||| ||||| ||||||||||||    
T  30977954 tgtgagtatgagagagaaagttgtcataaaagttgtcacaaaatggatgttcaaatatcatttctct 30977888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 24562903 - 24563011
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| || | |||||||||| || |  |||||||||||||||| ||||||| |  ||||||| |||| ||| ||||||||||    
T  24562903 aagaggagtgttatttgaacaaccatt-tggttgacaacttttaggacaaccataatttataaagaaaaggttggtatttacacgaaaaccaaagcaata 24563001  T
Q  141 aagagataaa 150  Q
     |||||||||    
T  24563002 gagagataaa 24563011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 119 - 230
Target Start/End: Original strand, 39449080 - 39449190
Alignment:
Q  119 ttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagt 218  Q
    ||||||| |||||||| ||||| |||||||||||       | ||||||||| || |||||||||||| |||||| ||||||| |||||||| ||||| |    
T  39449080 ttgcacgaaaatcaaaacaatagagagataaagtaaaaaa-tgatgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaat 39449178  T
Q  219 atcatttctcta 230  Q
    ||||||||||||    
T  39449179 atcatttctcta 39449190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 3012737 - 3012820
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcac 124  Q
    |||||| |||||||||||||||| || | |||||||||| || || |||||||||||||| | ||||||||| ||||||||||||    
T  3012737 aaagaggagtgttatttgaacaaccatt-tggttgacaacttatgggacaaccataatttttaaagaaaaagtaggtatttgcac 3012820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 9194495 - 9194432
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcattt 225  Q
    ||||||||| ||||||||||||||||| |||| ||||||| |||||||| ||||| ||||||||    
T  9194495 atgtgagtatgagagagaaagttgtcataaaagttgtcacaaaatggatgttcaaatatcattt 9194432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 229
Target Start/End: Original strand, 30546255 - 30546441
Alignment:
Q  51 ttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaa----------ggtatttgcacggaaatcaaagcaata 140  Q
    ||||||||||||  ||| |||||||||| || ||||||||||||||||||| || ||||| ||          |||||||||| | ||| |||| |||||    
T  30546255 ttatttgaacaactaatttggttgacaacttttgtgacaaccataatttataaaaaaaaaaaaaaaaaaagtaggtatttgcatgaaaaccaaaacaata 30546354  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
     |||||||||||       | || ||| || |||||||||| |||||||||||||| ||| ||||||||| ||||| ||||||||||||    
T  30546355 gagagataaagtaaaaa--taatatgaatatgagagagaaaattgtcacaaaaattatcattaaatggatattcaaatatcatttctct 30546441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 8427618 - 8427552
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||| |||| |||||||||||||||||||||||||||||  |||| ||| ||||| |||||||||||    
T  8427618 atgtaagtatgagagagaaagttgtcacaaaaattgtcaaaaaatagatgttcaaatatcatttctc 8427552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 11091252 - 11091353
Alignment:
Q  48 gtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagat 147  Q
    ||||||||||||||| |||| ||||||| ||||| || |||||||||||||||  | ||||||| |||||||| || | |||||||| ||| ||||| ||    
T  11091252 gtgttatttgaacaa-caatttggttgataatttatgagacaaccataatttacaaggaaaaagtaggtatttacaagaaaatcaaaacaacaaagaaat 11091350  T
Q  148 aaa 150  Q
    |||    
T  11091351 aaa 11091353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 229
Target Start/End: Original strand, 11384908 - 11385086
Alignment:
Q  49 tgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagata 148  Q
    |||||||||||||| |||| |||||||||| ||  ||||||| |||| ||||  ||||||||  | ||| ||  ||||||| |||| ||||| |||||||    
T  11384908 tgttatttgaacaaccaatttggttgacaacttacgtgacaatcatattttacaaagaaaaattaagtaattatacggaaaccaaaacaatagagagata 11385007  T
Q  149 aagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||       | ||||||||| |||||||||| || |||||||||||||||  |||| ||| || || ||| ||||||||    
T  11385008 aagt--aaaaatgatgtgagtatgagagagaaaattatcacaaaaattgtcatcaaattgatgtttaaatataatttctct 11385086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 22888827 - 22888892
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||||||||||||||||||||||  |||||| | ||||| |||||||||||    
T  22888827 atgtgagtatgagagagaaagttgtcacaaaaattgtca-aaaatggttgttcaaatatcatttctc 22888892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 44050121 - 44050014
Alignment:
Q  122 cacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatc 221  Q
    |||||||| |||||||||||||| | |||||       | ||||||||| ||||||||| |||||||||||| ||||||  |||||| | | ||||||||    
T  44050121 cacggaaaccaaagcaataaagaaagaaagtaaaaacataatgtgagtatgagagagaaggttgtcacaaaagttgtcataaaatggttgtacaagtatc 44050022  T
Q  222 atttctct 229  Q
    ||||||||    
T  44050021 atttctct 44050014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 4384120 - 4384056
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
    ||||||||| ||||||||||||||||||||||||||| || |||| ||| ||||| ||||||||||    
T  4384120 atgtgagtatgagagagaaagttgtcacaaaaattgt-acaaaatagatgttcaaatatcatttct 4384056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 228
Target Start/End: Original strand, 12889762 - 12889903
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    ||||| |||||||| | |||||| |  || |||||||||  |||||||||||||| ||||||||| |       | ||||||||| ||||||||||||||    
T  12889762 gacaatcataatttgtaaagaaagaatagatatttgcacaaaaatcaaagcaatagagagataaa-ttaaaaaataatgtgagtatgagagagaaagttg 12889860  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |  ||||| ||||||| |||||||| ||||  |||||||||||    
T  12889861 tagcaaaagttgtcacaaaatggatgttcatatatcatttctc 12889903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 29684619 - 29684684
Alignment:
Q  164 gtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||| |||||||||||||||  ||||||||||||||||||  || ||||| ||||||||||||    
T  29684619 gtgagtatgagagagaaagttgttgcaaaaattgtcactaaataaatgttcaaatatcatttctct 29684684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 10711903 - 10711759
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| | || ||||||| || || ||  |||| |||||||||  ||||||||  |||||||| |||| ||| |||||||||| |||||    
T  10711903 agtgttatttgaacaa-ctatttggttgataacttttgaaacaatcataatttacaaagaaaaaataggtatttacacgaaaaccaaagcaatagagaga 10711805  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    ||||||       | ||||||||| |||||||||| |||||||||||    
T  10711804 taaagt-aaaaagtaatgtgagtatgagagagaaaattgtcacaaaa 10711759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 37257505 - 37257449
Alignment:
Q  172 gagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||||||||||||  ||||| |||||||||||||||| ||||| |||||||||||    
T  37257505 gagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctc 37257449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 6511316 - 6511242
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaagtaaa 237  Q
    ||||||||| |||||||||||||||||| ||| |||| |  |||||| | ||||| ||||||||||||||||||||    
T  6511316 atgtgagtatgagagagaaagttgtcactaaagttgt-aaaaaatggttgttcaaatatcatttctctaaagtaaa 6511242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 7502431 - 7502498
Alignment:
Q  160 ttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
    |||| |||||| |||||||||||||||||||||||||||||  |||||| | | ||| ||||||||||    
T  7502431 ttatatgagtatgagagagaaagttgtcacaaaaattgtcaaaaaatggttgtacaaatatcatttct 7502498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 152
Target Start/End: Complemental strand, 9377633 - 9377531
Alignment:
Q  49 tgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagata 148  Q
    |||||||||||||| || | | |||||||| || || ||||  |||||||||  ||||||||| || |||||||||| ||| |||||||||| |||||||    
T  9377633 tgttatttgaacaaccatt-tagttgacaacttatgagacagtcataatttacaaagaaaaagtagatatttgcacgaaaaccaaagcaatagagagata 9377535  T
Q  149 aagt 152  Q
    ||||    
T  9377534 aagt 9377531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 152
Target Start/End: Complemental strand, 26277237 - 26277170
Alignment:
Q  85 tgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagt 152  Q
    ||||||||||||||||| || |||||| || |||||| |||||||  ||||||||| |||||||||||    
T  26277237 tgacaaccataatttataaataaaaagtagatatttgtacggaaactaaagcaatagagagataaagt 26277170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 228
Target Start/End: Original strand, 29051540 - 29051724
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||||||||| |||| |||| || || || | ||||||||||| ||||  ||||||||   |||||| ||||||||| || ||||||    
T  29051540 aaagaggagtgttatttgaacaaccaatttggt-gataacttatttgacaaccatactttacaaagaaaaaagtggtattggcacggaaaccatagcaat 29051638  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
      ||||| |||||       | |||| |||| || ||||||| ||||  ||||| |||||||||||||||| ||||| |||||||||||    
T  29051639 --agagagaaagt-aaaaaataatgtaagtatgaaagagaaaattgttgcaaaagttgtcactaaatggatgttcaaatatcatttctc 29051724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 193
Target Start/End: Complemental strand, 42866893 - 42866785
Alignment:
Q  84 gtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagt 183  Q
    ||||||| |||||||||  |||||||||  | |||||||||| | |||||||||||| |||||||||||       | ||||||||| |||||| |||||    
T  42866893 gtgacaatcataatttacaaagaaaaagtggatatttgcacgaagatcaaagcaatagagagataaagt-aaaaaataatgtgagtatgagagaaaaagt 42866795  T
Q  184 tgtcacaaaa 193  Q
    ||||||||||    
T  42866794 tgtcacaaaa 42866785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 43666697 - 43666752
Alignment:
Q  175 agagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||||||||||||| |||||  ||||||||| ||||| |||||||||||||    
T  43666697 agagaaagttgtcacaaaagttgtcgttaaatggatgttcaaatatcatttctcta 43666752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 4753302 - 4753160
Alignment:
Q  85 tgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagtt 184  Q
    ||||||||||||||||| ||||||||| | |||||  ||||||||||| ||||||| ||||||||| |       | || || |||  ||||||||||||    
T  4753302 tgacaaccataatttataaagaaaaagta-gtattgacacggaaatcatagcaatagagagataaaataaaaatataatatgtgtattagagagaaagtt 4753204  T
Q  185 gtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    || ||  || || |||| |||||||| ||||| |||||||||||    
T  4753203 gttacgtaagttatcaccaaatggatgttcaaatatcatttctc 4753160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 18254215 - 18254292
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaagtaaatta 240  Q
    ||||||||| |||||||||||||||||||||| |||| |  |||||| | ||||| |||||||||||||  ||||||||    
T  18254215 atgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttctctagtgtaaatta 18254292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 36587474 - 36587539
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| ||||||||||||||||| |||||||||||  |||||| | ||||| |||||||||||    
T  36587474 atgtgagtatgagagagaaagttgtca-aaaaattgtcaaaaaatggttgttcaaatatcatttctc 36587539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 44484662 - 44484735
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaagtaa 236  Q
    ||||||||| ||||||||||||||| ||||||||||| || |||||| | | ||| |||||||||||||| ||||    
T  44484662 atgtgagtatgagagagaaagttgt-acaaaaattgttacaaaatggttgtacaaatatcatttctctaaggtaa 44484735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 225
Target Start/End: Original strand, 34119539 - 34119720
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| ||||| |||||||||| || | |||||||||| || || ||||  |||||||||  ||||||||| | |||||  |||| |||||||| |||||     
T  34119539 agaggagtgtaatttgaacaaccatt-tggttgacaacttatgagacactcataatttacaaagaaaaagtaagtattcacacgaaaatcaaaacaatag 34119637  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcattt 225  Q
    |||||||||||       | ||||||||| ||||||||||||||||  |||| |||| || | |||||| ||||| ||| ||||    
T  34119638 agagataaagt-aaaaaataatgtgagtatgagagagaaagttgtcgtaaaagttgttacaatatggatgttcaaatataattt 34119720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 41910909 - 41910856
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataattta 100  Q
    |||||||||||||||| |||| || |||||||||  ||||||||||||||||||    
T  41910909 agtgttatttgaacaaccaatttgattgacaattcatgtgacaaccataattta 41910856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 5031990 - 5031922
Alignment:
Q  161 tatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||| |||||||||||||||| ||||| |||| || |||||| | | ||| ||||||||||||    
T  5031990 tatgtgagtatgagagagaaagttgtcgcaaaagttgttacaaaatggttgtacaaatatcatttctct 5031922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 229
Target Start/End: Complemental strand, 43513520 - 43513411
Alignment:
Q  119 ttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagt 218  Q
    ||||||| |||||||||||||| |||||||||||       | | ||||||| || |||||||||| | ||||||||| |||| |||||||  ||||| |    
T  43513520 ttgcacgaaaatcaaagcaatagagagataaagtaaaaaa-tgacgtgagtatgaaagagaaagttataacaaaaattatcaccaaatggacgttcaaat 43513422  T
Q  219 atcatttctct 229  Q
    |||||||||||    
T  43513421 atcatttctct 43513411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 4758531 - 4758633
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||| |||||||||| |||| || ||||| | ||| || |||| ||||| ||||||||   | |||| |||||||||||| ||||||| |||||    
T  4758531 agtgttatttcaacaatcaatttggt-gataatttatttgataatcatactttataaagaaaaaagtgatattggcacggaaatcatagcaatagagaga 4758629  T
Q  147 taaa 150  Q
    ||||    
T  4758630 taaa 4758633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 14871913 - 14871846
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| ||||||||||| |||||||||| ||||||  |||||| | ||||  ||||||||||||    
T  14871913 atgtgagtatgagagagaaagctgtcacaaaagttgtcaaaaaatggttgttcacatatcatttctct 14871846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 18737879 - 18737946
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||| || |||||||||||||||||||||| |||| |  |||||||| | ||| ||||||||||||    
T  18737879 atgtgaatatgagagagaaagttgtcacaaaagttgttaaaaaatggatatacaaatatcatttctct 18737946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 34144557 - 34144623
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| ||||||||||||||| |||||||||||||| || ||| | | ||| ||||||||||||    
T  34144557 atgtgagtatgagagagaaagttgt-acaaaaattgtcacaaattggttgtacaaatatcatttctct 34144623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 35171232 - 35171298
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| ||||||||||||||| || ||||||||||| |||||| | | ||| ||||||||||||    
T  35171232 atgtgagtatgagagagaaagttgt-accaaaattgtcacaaaatggttgtacaaatatcatttctct 35171298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 36643976 - 36644038
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaa 110  Q
    |||||||||||||||| || | ||||||||||||| || |||||||||||||||  ||||||||    
T  36643976 agtgttatttgaacaaccatt-tggttgacaatttatgggacaaccataatttacaaagaaaaa 36644038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 38821432 - 38821365
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| |||| ||||| ||||||||||| ||||||  |||||| | ||||| ||||||||||||    
T  38821432 atgtgagtatgagaaagaaaattgtcacaaaagttgtcataaaatggttgttcaaatatcatttctct 38821365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 232
Target Start/End: Original strand, 42223975 - 42224018
Alignment:
Q  189 caaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    |||||||| ||||||||||||| ||||| |||||||||||||||    
T  42223975 caaaaattatcactaaatggatgttcaaatatcatttctctaaa 42224018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 43057130 - 43057055
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaagtaaa 237  Q
    |||||||||  ||||||||||||||||||||| |||| |  || ||| | ||||| ||||||||||||||| ||||    
T  43057130 atgtgagtataagagagaaagttgtcacaaaagttgttaaaaagtggttgttcaaatatcatttctctaaaataaa 43057055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 44254661 - 44254598
Alignment:
Q  166 gagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||| ||||||||||||||| |||||| |||||||  |||| || ||||| ||||||||||||    
T  44254661 gagtatgagagagaaagttgtaacaaaagttgtcacagaatgaatgttcaaatatcatttctct 44254598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 14877022 - 14876956
Alignment:
Q  163 tgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||| |||||||||||||||||||||| ||||||  |||| | | ||||  ||||||||||||    
T  14877022 tgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatagttgttcacatatcatttctct 14876956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 31922298 - 31922364
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||  |||||||||||||||||||||||||||||  || ||| | ||| | |||||||||||    
T  31922298 atgtgagtttgagagagaaagttgtcacaaaaattgtcaaaaactggttgttcgaatatcatttctc 31922364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 34431832 - 34431898
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||||||  |||||||||||||||||||||||||| || ||||  || ||||  |||||||||||    
T  34431832 atgtgagtataagagagaaagttgtcacaaaaattgttacaaaatatatattcagatatcatttctc 34431898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 36517249 - 36517195
Alignment:
Q  175 agagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||||||||||||||| |||  |||| ||| ||||| ||||||||||||    
T  36517249 agagaaagttgtcacaaaaattatcataaaatagatgttcaaatatcatttctct 36517195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 207
Target Start/End: Original strand, 39213662 - 39213820
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||| ||||| || | || ||||||| || || ||||||||| |||||  |||||||||  |||||||||||| |||  |||| |||| |||||    
T  39213662 agtgttatttaaacaaccatt-tgattgacaacttttgggacaaccatcatttacaaagaaaaagttggtatttgcacgaaaactaaaggaatagagaga 39213760  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatg 207  Q
    ||||||       | ||||||||| |||||| ||||||||  ||||| ||||||| |||||    
T  39213761 taaagt-aaaaaataatgtgagtatgagagataaagttgttgcaaaagttgtcacaaaatg 39213820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 196
Target Start/End: Original strand, 40210073 - 40210107
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaatt 196  Q
    ||||||||| |||||||||||||||||||||||||    
T  40210073 atgtgagtatgagagagaaagttgtcacaaaaatt 40210107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 16799735 - 16799674
Alignment:
Q  165 tgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttc 226  Q
    |||||| ||||||||||||| ||||||||||||| |  |||||||| | ||| |||||||||    
T  16799735 tgagtatgagagagaaagttatcacaaaaattgttaggaaatggatgtacaaatatcatttc 16799674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 26277269 - 26277232
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaa 78  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  26277269 aagagaagtgttatttgaacaaccaatgtggttgacaa 26277232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 27490746 - 27490802
Alignment:
Q  172 gagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||||||||||||||| ||||||  |||||| | ||||| ||||||||||||    
T  27490746 gagagagaaagttgtcacaaaagttgtca-aaaatggttgttcaaatatcatttctct 27490802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 195
Target Start/End: Complemental strand, 37003676 - 37003643
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaat 195  Q
    ||||||||| ||||||||||||||||||||||||    
T  37003676 atgtgagtatgagagagaaagttgtcacaaaaat 37003643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 40504414 - 40504345
Alignment:
Q  39 taaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaa 108  Q
    |||||||||||||||||||||||| || | | ||||| || ||||| |||||||| ||| ||| ||||||    
T  40504414 taaagagaagtgttatttgaacaaccatttttgttgataacttgtgggacaaccaaaatatataaagaaa 40504345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #96
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 152
Target Start/End: Original strand, 4299283 - 4299319
Alignment:
Q  116 tatttgcacggaaatcaaagcaataaagagataaagt 152  Q
    |||||||||| |||||||||||||| |||||||||||    
T  4299283 tatttgcacgaaaatcaaagcaatagagagataaagt 4299319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #97
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 6336315 - 6336251
Alignment:
Q  165 tgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||| |||||||||||||||||||||| |||| |  |||||| | | ||| ||||||||||||    
T  6336315 tgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctct 6336251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #98
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 7552742 - 7552675
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaa 109  Q
    ||||| ||||||||||||||||||||| ||| ||||||||| | |||||| |||| ||||  |||||||    
T  7552742 aagaggagtgttatttgaacaatcaatttgg-tgacaatttatttgacaatcatattttacaaagaaaa 7552675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #99
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 9194306 - 9194270
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  9194306 atgtgagtatgagagagaaagatgtcacaaaaattgt 9194270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 9207655 - 9207619
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  9207655 atgtgagtatgagagagaaagttgtcacaaaagttgt 9207619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #101
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 9760083 - 9760051
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaa 194  Q
    ||||||||| |||||||||||||||||||||||    
T  9760083 atgtgagtatgagagagaaagttgtcacaaaaa 9760051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #102
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 12784406 - 12784470
Alignment:
Q  164 gtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||| ||||||||||||||||||||||||| | |  |||||| | | ||| |||||||||||    
T  12784406 gtgagtatgagagagaaagttgtcacaaaaattattataaaatggttgtacaaatatcatttctc 12784470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #103
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 33780325 - 33780389
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaa 150  Q
    |||||||||| ||||  |||||||   || |||||||||| || |||||||||||||||||||||    
T  33780325 gacaaccatagtttacaaagaaaatatagatatttgcacgaaactcaaagcaataaagagataaa 33780389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #104
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 36909849 - 36909916
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||| | |||||||||||||| ||||| ||||||| |||||| | | ||| |||||||||||||    
T  36909849 atgtgagtatgtgagagaaagttgtc-caaaagttgtcacaaaatggttgtacaaatatcatttctcta 36909916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #105
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 41042319 - 41042252
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||| |||||| ||||||||||||||| |||| |  |||||| | ||||| |||||||||||||    
T  41042319 atgtgagtatgagagaaaaagttgtcacaaaagttgtta-aaaatggttgttcaaatatcatttctcta 41042252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 7e-46; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 49 - 228
Target Start/End: Original strand, 2688958 - 2689135
Alignment:
Q  49 tgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagata 148  Q
    ||||||||||||||||||| |||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||  ||| |||| ||||| |||||||    
T  2688958 tgttatttgaacaatcaatttggttgacaacttttgtgacaaccataatttataaagaaaaagtaggtatttgcacataaaccaaaacaatagagagata 2689057  T
Q  149 aagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||       | ||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||    
T  2689058 aagt--aaaaataatgtgagtatgagagagaaagttgtcacaaaaattgtcattaaatggatgttcaaatatcatttctc 2689135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 41 - 229
Target Start/End: Original strand, 32459402 - 32459589
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| |||| || ||||||| || |  |||||||||||||||  |||||||||  |||||||||||| ||| ||||||||||    
T  32459402 aagaggagtgttatttgaacaa-caatttgattgacaacttttaggacaaccataatttacaaagaaaaagttggtatttgcacgaaaaccaaagcaata 32459500  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
     |||||||||||       | |||||| || |||||||||||||||||||||| ||||||  |||||||| ||||| ||||||||||||    
T  32459501 gagagataaagtaaaaaagtaatgtgaatatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 32459589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 42 - 230
Target Start/End: Original strand, 18141188 - 18141374
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| || | |||||||||| || ||||||||||||||||||  ||||| |||  ||||| |||||| ||||||||||||||     
T  18141188 agaggagtgttatttgaacaaccatt-tggttgacaacttttgtgacaaccataatttacaaagaataagttggtatgtgcacgaaaatcaaagcaatag 18141286  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    |||||||||||       | ||||||||| |||||||||||||||||||||| ||||||  ||||| || || || |||||||||||||    
T  18141287 agagataaagt-aaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatgaatgtttaaatatcatttctcta 18141374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 41 - 228
Target Start/End: Original strand, 35213447 - 35213632
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| || | |||||||||| || || ||||| |||||||||  |||||||||  |||||||||||| ||| ||||||||||    
T  35213447 aagaggagtgttatttgaacaaccatt-tggttgacaacttttgggacaatcataatttacaaagaaaaagttggtatttgcacgaaaaccaaagcaata 35213545  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
     |||||||||||       | ||||||||| ||||||||||||||| |||||| ||||||| |||| ||| ||||| |||||||||||    
T  35213546 gagagataaagt-aaaaagtaatgtgagtatgagagagaaagttgttacaaaagttgtcacaaaatagatgttcaaatatcatttctc 35213632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 228
Target Start/End: Complemental strand, 23628547 - 23628360
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaag--aaaaagaaggtatttgcacggaaatcaaagcaa 138  Q
    ||||| |||||||||| ||||| |||| ||||||||||||| | ||||||||||||||||| |||  |||||| || |||||||||||||| ||||  ||    
T  23628547 aagaggagtgttatttaaacaaccaatttggttgacaatttttatgacaaccataatttataaagaaaaaaagtagatatttgcacggaaaccaaaataa 23628448  T
Q  139 taaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    || |||||||||||       | || |||||| |||| ||||| |||||||||||||| ||| ||||||||| ||||| |||||||||||    
T  23628447 tagagagataaagt--aaaaataatatgagtatgagatagaaaattgtcacaaaaattatcattaaatggatattcaaatatcatttctc 23628360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 223
Target Start/End: Original strand, 13143274 - 13143448
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | |||||||||| || || |||||||||||||||  |||||||||   ||||||||||| |||||||||||||| |||||    
T  13143274 agtgttatttgaacaaccatt-tggttgacaacttttgggacaaccataatttacaaagaaaaagtttgtatttgcacgaaaatcaaagcaatagagaga 13143372  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcat 223  Q
    ||||||       | ||||||||| |||||||||||||||  ||||||||||||| ||||| || ||||| ||||||    
T  13143373 taaagt-aaaaagtaatgtgagtatgagagagaaagttgttgcaaaaattgtcacaaaatgaatgttcaaatatcat 13143448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 230
Target Start/End: Original strand, 30036681 - 30036867
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||||||||||||||||||||||||| ||| |||||| || | |||||| |||| ||||  |||||||| | |||||| ||||||||| || |||| ||     
T  30036681 agagaagtgttatttgaacaatcaatttgg-tgacaacttatttgacaatcatactttacaaagaaaaaaatggtattggcacggaaaccatagcattag 30036779  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    |||||||||||       |||||||| || |||||||||||||||  ||||| |||||||||||| ||| ||||| |||||||||||||    
T  30036780 agagataaagt-aaaaaattatgtgattatgagagagaaagttgttgcaaaagttgtcactaaatagatgttcaaatatcatttctcta 30036867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 41 - 228
Target Start/End: Original strand, 754324 - 754509
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| || | ||||||||||||| ||  ||||||||||||||  |||||||||  |||||||||||| ||| ||||||||||    
T  754324 aagaggagtgttatttgaacaaccatt-tggttgacaatttttggaacaaccataatttacaaagaaaaagttggtatttgcacgaaaaccaaagcaata 754422  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
     |||||||||||       | ||||||||| |||||| ||||||||  ||||| ||||||| ||||| || ||||| |||||||||||    
T  754423 gagagataaagt-aaaaagtaatgtgagtatgagagaaaaagttgttgcaaaagttgtcacaaaatgaatgttcaaatatcatttctc 754509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 39 - 237
Target Start/End: Original strand, 6531064 - 6531263
Alignment:
Q  39 taaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaa 138  Q
    ||||||| |||||||||||||||| || | ||||||| || |  || |||||||||||||||  ||||||||| | ||||||||||| ||||||||||||    
T  6531064 taaagaggagtgttatttgaacaaccatt-tggttgataactaatgggacaaccataatttacaaagaaaaagtatgtatttgcacgaaaatcaaagcaa 6531162  T
Q  139 taa---agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaagta 235  Q
    |||   |||||||||||       | ||||||||| |||||||||||||||| || || ||||||| |||||||| ||||| ||||||||||| ||| ||    
T  6531163 taatagagagataaagt-aaaaaataatgtgagtatgagagagaaagttgtcccataagttgtcacaaaatggatgttcaaatatcatttctcaaaaata 6531261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 193
Target Start/End: Original strand, 5028151 - 5028302
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||||| ||||||||||||||||| | ||||||| || || || |||||||||||||||| ||||||||| || ||||| |||| ||| |||||||||    
T  5028151 aaagagaaatgttatttgaacaatcatt-tggttgataacttatgagacaaccataatttataaagaaaaagtagatatttacacgaaaaccaaagcaat 5028249  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    |||||||||||||       | |||||||||  |||||||||||||||||||||    
T  5028250 aaagagataaagt-aaaaagtaatgtgagtataagagagaaagttgtcacaaaa 5028302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 20822760 - 20822942
Alignment:
Q  46 aagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagag 145  Q
    ||||||||||||||||| || | |||||||||| || |  |||||||||||||||| || ||| |   |||||||||||| ||| |||||||||| ||||    
T  20822760 aagtgttatttgaacaaccatt-tggttgacaacttttaggacaaccataatttataaaaaaatatt-ggtatttgcacgaaaaccaaagcaatagagag 20822857  T
Q  146 ataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    |||||||       | ||||||||| |||||||||||||||||||||| ||||||  |||||||| ||||| ||||||||||||||    
T  20822858 ataaagtaaaaag-taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctctaa 20822942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 1369539 - 1369435
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | ||||||||||||| || |||||||||||||||  |||||||||  |||||||||||| |||||||||||||| |||||    
T  1369539 agtgttatttgaacaaccatt-tggttgacaatttttgagacaaccataatttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagaga 1369441  T
Q  147 taaagt 152  Q
    ||||||    
T  1369440 taaagt 1369435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 229
Target Start/End: Original strand, 5327477 - 5327664
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| |||| |||| ||||| || | ||||||||||| ||||  ||||||||   ||||||  |||||||| || ||||| |    
T  5327477 aagaggagtgttatttgaacaaccaatttggt-gacaacttatttgacaaccatactttacaaagaaaaaagtggtattgacacggaaaccatagcaaga 5327575  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
     |||||||||||       | || |||||| ||||||||||||||| | |||| |||||||||||||||| ||||| ||||||||||||    
T  5327576 gagagataaagtaaaaaaataatatgagtatgagagagaaagttgttataaaagttgtcactaaatggatgttcaaatatcatttctct 5327664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 231
Target Start/End: Original strand, 11547416 - 11547603
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| ||||||||||||||||||||| |||| |||||||| | ||||| ||||||||||  ||||||||   ||||||  |||||||| || |||||||     
T  11547416 agaggagtgttatttgaacaatcaatttggt-gacaatttatttgacagccataatttacaaagaaaaaagtggtattgacacggaaaccatagcaatag 11547514  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    |||||||||||       | ||||||||| |||||||||| ||||  ||||| |||||| ||||||||| ||||| ||| ||||||||||    
T  11547515 agagataaagt-aaaaaataatgtgagtatgagagagaaaattgttgcaaaagttgtcattaaatggatgttcaaatattatttctctaa 11547603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 229
Target Start/End: Complemental strand, 26832832 - 26832645
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||||||| |||||||||||| || | || ||||||| || ||||||||||||||||||  ||||||||  | ||||||||||| ||| |||| ||||    
T  26832832 aaagagaagtcttatttgaacaaccatt-tgattgacaacttatgtgacaaccataatttacgaagaaaaactatgtatttgcacgaaaaccaaaacaat 26832734  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    | |||||||||||       | ||||||||| |||||||||| || |   |||||||||||  |||||||||||||| ||||||||||||    
T  26832733 agagagataaagt-aaaaaatgatgtgagtatgagagagaaaattatataaaaaattgtcaaaaaatggatcttcaaatatcatttctct 26832645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 229
Target Start/End: Original strand, 2075341 - 2075523
Alignment:
Q  45 gaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaaga 144  Q
    |||||||||||||||||| |||| |||| ||||| || | ||||||||||||||||  ||||||||   |||||| |||||||||  | | ||||| |||    
T  2075341 gaagtgttatttgaacaaccaatttggt-gacaacttatttgacaaccataatttacaaagaaaaaagtggtattggcacggaaactataacaatagaga 2075439  T
Q  145 gataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||       | ||||||||| |||||||||||||||  |||||  ||||||||||||||| ||||| ||||||||||||    
T  2075440 gataaagtaaaaaa-taatgtgagtatgagagagaaagttgttgcaaaagctgtcactaaatggatgttcaaatatcatttctct 2075523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 230
Target Start/End: Original strand, 30152417 - 30152603
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||||||||||||||||||||||||| |||| || || || | ||||||||||| ||||  || ||||| | |||||| | ||||||| || |||| ||     
T  30152417 agagaagtgttatttgaacaatcaatttggt-gataacttatttgacaaccatactttacaaataaaaaaatggtattggtacggaaaccatagcattag 30152515  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    |||||||||||       ||||||||||| |||||||||||||||  ||||| ||||||||||||| || ||||| |||||||| ||||    
T  30152516 agagataaagtaaaaaa-ttatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatgaatgttcaaatatcatttttcta 30152603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 237
Target Start/End: Complemental strand, 3199152 - 3198951
Alignment:
Q  33 ataaagtaaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatca 132  Q
    ||||| ||||||  ||||||||||||||||  ||| || | || ||||| | |||||| |||||||||| ||||||||| || ||||  |||||||| ||    
T  3199152 ataaaataaagatgagtgttatttgaacaactaatttgat-gataatttatttgacaatcataatttataaagaaaaagtag-tattgacacggaaacca 3199055  T
Q  133 aagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
     ||||||| ||||||||| |       | ||||||||| ||||||||||||||||| ||||||| |||| ||||| || ||||| |||||||||||||||    
T  3199054 tagcaatatagagataaaatgaaaaa-taatgtgagtatgagagagaaagttgtcataaaaattatcaccaaatgaatgttcaaatatcatttctctaaa 3198956  T
Q  233 gtaaa 237  Q
     ||||    
T  3198955 ataaa 3198951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 229
Target Start/End: Complemental strand, 24842499 - 24842367
Alignment:
Q  95 aatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaa 194  Q
    ||||||| | ||||||| ||||||||||||||||| ||||  |||| |||||||||||       | ||||||||| ||||||||||| ||||||||||     
T  24842499 aatttataaggaaaaagtaggtatttgcacggaaaccaaaaaaatagagagataaagtaaaaa--taatgtgagtatgagagagaaagctgtcacaaaag 24842402  T
Q  195 ttgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||| |||||| || ||||| ||||||||||||    
T  24842401 ttgtcattaaatgaatgttcaaatatcatttctct 24842367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 34037102 - 34036979
Alignment:
Q  103 aagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcact 202  Q
    ||||||||| | ||||||||||| |||||||| |||||||||||||||||       | || |||||| || |||||||||| ||||||||||| ||||     
T  34037102 aagaaaaagtatgtatttgcacgaaaatcaaaacaataaagagataaagtaaaaa--tgatatgagtatgaaagagaaagttatcacaaaaattatcacc 34037005  T
Q  203 aaatggatcttcaagtatcatttctc 228  Q
    |||||||| ||||| |||||||||||    
T  34037004 aaatggatgttcaaatatcatttctc 34036979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 42 - 230
Target Start/End: Original strand, 3610848 - 3611034
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| |||| |||| ||||| || | ||| ||||||| ||||  ||||||||   ||||||  |||||||| || |||||||     
T  3610848 agaggagtgttatttgaacaaccaatttggt-gacaacttatttgataaccatattttacaaagaaaaaagtggtattgacacggaaaccatagcaatag 3610946  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    |||||||||||       | ||||||||| |||||| ||||||||  ||||| || ||||||||||||| ||||| |||||||||||||    
T  3610947 agagataaagtaaaaag-taatgtgagtatgagagaaaaagttgttgcaaaagttatcactaaatggatgttcaaatatcatttctcta 3611034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 46 - 230
Target Start/End: Complemental strand, 32046878 - 32046696
Alignment:
Q  46 aagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagag 145  Q
    ||||||||||||||||| || | |||||||||| || || |||||||||||||||| |||||||||  | |||||||||  ||  |||  ||||| ||||    
T  32046878 aagtgttatttgaacaaccatt-tggttgacaacttatgggacaaccataatttataaagaaaaagttgttatttgcacaaaatccaacacaatagagag 32046780  T
Q  146 ataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    |||||||       | ||||||||| ||||||||| ||||||||| || |||| || |||| ||| ||||| |||||||||||||    
T  32046779 ataaagt-aaaaaataatgtgagtatgagagagaaggttgtcacataagttgttacaaaattgatgttcaaatatcatttctcta 32046696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 229
Target Start/End: Complemental strand, 33421868 - 33421759
Alignment:
Q  119 ttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagt 218  Q
    ||||||| |||||||||||||| |||||||||||       | ||||||||| || |||||||||||| |||||| ||||||| |||||||| ||||| |    
T  33421868 ttgcacgaaaatcaaagcaatagagagataaagtaaaaaa-tgatgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaat 33421770  T
Q  219 atcatttctct 229  Q
    |||||||||||    
T  33421769 atcatttctct 33421759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 207
Target Start/End: Original strand, 14986636 - 14986795
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| |||| ||||| || | |||||| |||| ||||  ||||||||   |||||| ||||||||| || |||||||||||||    
T  14986636 agtgttatttgaacaaccaatttggt-gacaacttatttgacaatcatactttacaaagaaaaaagtggtattggcacggaaaccatagcaataaagaga 14986734  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatg 207  Q
    ||||||       |  |||||||| |||||||||| ||||  ||||| |||||||||||||    
T  14986735 taaagtaaaaaaatagtgtgagtatgagagagaaaattgttgcaaaagttgtcactaaatg 14986795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 150
Target Start/End: Original strand, 6856057 - 6856158
Alignment:
Q  49 tgttatttgaacaatcaatctggttgacaatttgtgtgacaaccata-atttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagat 147  Q
    |||||||||||||| || | ||||||||||||| || ||||| |||| |||||| ||||||||  ||||||| ||| | |||||||||||||||||||||    
T  6856057 tgttatttgaacaaccatt-tggttgacaatttatgagacaaacatagatttataaagaaaaaataggtattggcaagaaaatcaaagcaataaagagat 6856155  T
Q  148 aaa 150  Q
    |||    
T  6856156 aaa 6856158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 15318101 - 15318260
Alignment:
Q  69 tggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgag 168  Q
    |||||||||||||   ||||||||||||||||  ||| ||||  |||||| |||| | ||| | ||||||  ||||||||||||       | ||||||     
T  15318101 tggttgacaatttaaatgacaaccataatttacaaaggaaaaataggtatatgcatgaaaacctaagcaacgaagagataaagtaaataa-taatgtgaa 15318199  T
Q  169 tacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    || ||||||||||||||| |||||| ||||||| |||||||| ||||| ||||||||||||    
T  15318200 tatgagagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctct 15318260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 4820317 - 4820248
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    ||||||||| |||||||||||||||  ||||| || ||||||||||||| ||||| ||||||||||||||    
T  4820317 atgtgagtatgagagagaaagttgttgcaaaagttatcactaaatggatgttcaaatatcatttctctaa 4820248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 28041705 - 28041810
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||| |||||||||| |||||||||| ||   | |||||||| |||||  ||||||||| | ||| ||||||||||  |||||||||| |||||    
T  28041705 agtgttattttaacaatcaatttggttgacaacttacttaacaaccatcatttacaaagaaaaagtaagtacttgcacggaagccaaagcaatagagaga 28041804  T
Q  147 taaagt 152  Q
    ||||||    
T  28041805 taaagt 28041810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 2242027 - 2242094
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| |||||||||||||||||||||||||||||  |||||  | ||||| ||||||||||||    
T  2242027 atgtgagtatgagagagaaagttgtcacaaaaattgtcaaaaaatgattgttcaaatatcatttctct 2242094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 229
Target Start/End: Original strand, 2777203 - 2777388
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||||||||||||||||||||||||| |||| || || || | ||||||  ||| ||||  ||||||||   | |||| ||||||||| || |||||||    
T  2777203 aagagaagtgttatttgaacaatcaatttggt-gataacttatttgacaattatattttacaaagaaaaaagtgatattagcacggaaaccatagcaata 2777301  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
     |||||||| ||       | ||||||||| |||||||||| ||||  ||||| |||| ||||||||||| ||||| ||||||||||||    
T  2777302 gagagataa-gtaaaaag-taatgtgagtatgagagagaaaattgttgcaaaagttgttactaaatggatgttcaaatatcatttctct 2777388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 14693179 - 14693248
Alignment:
Q  83 tgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagt 152  Q
    ||||||||  ||||||||  ||||||||| ||||||||||||||||| |||||||| | |||||||||||    
T  14693179 tgtgacaaatataatttacaaagaaaaagtaggtatttgcacggaaaccaaagcaacagagagataaagt 14693248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 14699591 - 14699660
Alignment:
Q  83 tgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagt 152  Q
    ||||||||| ||||||||  ||||||||| ||||||||||||| ||| |||||||| | |||||||||||    
T  14699591 tgtgacaacaataatttacaaagaaaaagtaggtatttgcacgaaaaccaaagcaacagagagataaagt 14699660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 229
Target Start/End: Original strand, 17551306 - 17551451
Alignment:
Q  83 tgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaag 182  Q
    ||||||||||| ||||||| ||||||| || || |||  |||  ||| |||| ||||| |||||||||||       | ||||||||| |||||||||||    
T  17551306 tgtgacaaccaaaatttataaagaaaatgaggg-attgacacaaaaaccaaaacaatagagagataaagtaaaaacataatgtgagtatgagagagaaag 17551404  T
Q  183 ttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||| |||||| ||||||  |||||| | ||||| ||||||||||||    
T  17551405 ttgttacaaaagttgtcaaaaaatggttgttcaaatatcatttctct 17551451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 9050320 - 9050208
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||| ||||||||||||||| ||||||| | ||||||||||| |  ||||  |||||||||  |||||| || ||||| ||||||| ||||||||  |||    
T  9050320 aaagtgaagtgttatttgaataatcaatttagttgacaatttataggacagtcataatttacaaagaaatagtaggtagttgcacgaaaatcaaaataat 9050221  T
Q  140 aaagagataaagt 152  Q
    | | |||||||||    
T  9050220 agaaagataaagt 9050208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 15368828 - 15368895
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||| |||| ||||||||||||||| |||||| |||| || |||||||| ||||| ||||||||||||    
T  15368828 atgttagtatgagagagaaagttgtaacaaaagttgttacaaaatggatgttcaaatatcatttctct 15368895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 33651086 - 33651019
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||  |||||||||||||||||||||||| | || |||| ||| ||||| ||||||||||||    
T  33651086 atgtgagtattagagagaaagttgtcacaaaaattattacaaaatagatgttcaaatatcatttctct 33651019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 13423034 - 13422980
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaa 216  Q
    ||||||||| ||||||||||||||||||||||||||| |  |||||||| |||||    
T  13423034 atgtgagtatgagagagaaagttgtcacaaaaattgttatgaaatggatgttcaa 13422980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 229
Target Start/End: Original strand, 8505744 - 8505846
Alignment:
Q  127 aaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttc 226  Q
    |||||||||||||| ||||| |||||       | |||||| || |||||||||||||||||||||| ||||||  |||||  | ||||| |||||||||    
T  8505744 aaatcaaagcaatagagagaaaaagtaaaaggataatgtgaatatgagagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatcatttc 8505843  T
Q  227 tct 229  Q
    |||    
T  8505844 tct 8505846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 228
Target Start/End: Original strand, 28944912 - 28945050
Alignment:
Q  89 aaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtca 188  Q
    ||||||||||| | ||||||||  ||||||||| ||| |||||||||||||| ||| |||||||       | |||| |||| || |||||||||| | |    
T  28944912 aaccataatttgtaaagaaaaaataggtatttgtacgaaaatcaaagcaatagagaaataaagt-aaaaaataatgttagtatgaaagagaaagttataa 28945010  T
Q  189 caaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||| || |||| |||||||| ||||| ||| |||||||    
T  28945011 caaaagttatcacaaaatggatattcaaatataatttctc 28945050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 8645409 - 8645336
Alignment:
Q  127 aaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtca 200  Q
    |||||||||||||| ||||| |||||       | ||||||||| |||||||||||||||||||||| ||||||    
T  8645409 aaatcaaagcaatagagagagaaagtaaaaggataatgtgagtatgagagagaaagttgtcacaaaagttgtca 8645336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 152
Target Start/End: Complemental strand, 31749543 - 31749440
Alignment:
Q  48 gtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagat 147  Q
    |||||||||||||||||| | || ||||||| ||  | |||||||||||||||  ||||||||  || ||||| |||| |||| ||| ||||| ||||||    
T  31749543 gtgttatttgaacaatcatt-tgattgacaacttaagagacaaccataatttacaaagaaaaaatagatatttacacgaaaattaaaacaatagagagat 31749445  T
Q  148 aaagt 152  Q
    |||||    
T  31749444 aaagt 31749440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 3339505 - 3339571
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| ||||||||||||||| |||||| ||||||| |||||| | | ||| ||||||||||||    
T  3339505 atgtgagtatgagagagaaagttgt-acaaaagttgtcacaaaatggttgtacaaatatcatttctct 3339571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 8747232 - 8747169
Alignment:
Q  165 tgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||| ||||||||||||||| |||||| ||||||| |||||||| || || |||||| ||||    
T  8747232 tgagtatgagagagaaagttgtaacaaaagttgtcacaaaatggatgttaaaatatcatatctc 8747169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 13658898 - 13658831
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| || ||||||||||||||||| | |||| || |||||||| || || ||||||||||||    
T  13658898 atgtgagtatgaaagagaaagttgtcacaatagttgttaccaaatggatgttgaaatatcatttctct 13658831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 11635540 - 11635606
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||| || |||||||||||||||||||||| ||||||  |||||  | ||||| |||||||||||    
T  11635540 atgtgaatatgagagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatcatttctc 11635606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 198
Target Start/End: Complemental strand, 14817995 - 14817961
Alignment:
Q  164 gtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||| |||||||||||||||||||||||||||    
T  14817995 gtgagtatgagagagaaagttgtcacaaaaattgt 14817961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 25811844 - 25811909
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||||||||||||||| |||| |  |||||| | ||||| |||||||||||    
T  25811844 atgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttctc 25811909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 25995507 - 25995442
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| ||||||||||||||| |||||||||| ||| |||||| | | ||| |||||||||||    
T  25995507 atgtgagtatgagagagaaagttgt-acaaaaattgccacaaaatggttgtacaaatatcatttctc 25995442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 196
Target Start/End: Complemental strand, 28630164 - 28630130
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaatt 196  Q
    ||||||||| |||||||||||||||||||||||||    
T  28630164 atgtgagtatgagagagaaagttgtcacaaaaatt 28630130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 33712386 - 33712320
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||| ||| |||||||||||||||||||||| ||||||  || ||| | ||||| |||||||||||    
T  33712386 atgtgtgtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttctc 33712320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 34047452 - 34047387
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||||||||||||||| |||| |  |||||| | ||||| |||||||||||    
T  34047452 atgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttctc 34047387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 5570339 - 5570403
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
    ||||||||| |||||||||| |||||||||||||||| |  |||||| | ||||| ||||||||||    
T  5570339 atgtgagtatgagagagaaaattgtcacaaaaattgt-aaaaaatggttgttcaaatatcatttct 5570403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 34504199 - 34504095
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| |||| ||||| || | |||||| |||| ||||  ||||||||   ||||||  |||||||| || ||||||| |||||    
T  34504199 agtgttatttgaacaaccaatttggt-gacaacttatttgacaatcatattttacaaagaaaaaattggtattgacacggaaaccatagcaatagagaga 34504101  T
Q  147 taaagt 152  Q
    ||||||    
T  34504100 taaagt 34504095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 29459107 - 29459167
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatca 222  Q
    ||||||||||||||||||||||| ||  |||| ||||||| |||||| | ||||| |||||    
T  29459107 atgtgagtacgagagagaaagttatcttaaaatttgtcacaaaatggttgttcaaatatca 29459167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 34570599 - 34570631
Alignment:
Q  161 tatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    |||||||||| ||||||||||||||||||||||    
T  34570599 tatgtgagtatgagagagaaagttgtcacaaaa 34570631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 91)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 39 - 229
Target Start/End: Original strand, 29440406 - 29440594
Alignment:
Q  39 taaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaa 138  Q
    ||||||| ||||||||||||||||||||| || ||||||||||  ||||||||||||||||||  |||||||| | |||||||||||||||||||| |||    
T  29440406 taaagaggagtgttatttgaacaatcaatttgattgacaatttacgtgacaaccataatttatacagaaaaagtaagtatttgcacggaaatcaaaacaa 29440505  T
Q  139 taaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    || |||||||||||       | ||||||||| |||| ||||||||||||||||| || |||| ||||| || ||||| ||||||||||||    
T  29440506 tagagagataaagt--aaaaatgatgtgagtatgagaaagaaagttgtcacaaaagttatcaccaaatgaatgttcaaatatcatttctct 29440594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 41 - 235
Target Start/End: Complemental strand, 9208250 - 9208059
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| |||| |||||||||| || ||||||||| ||||| ||| ||||||||| ||||||||||||| ||| |||| |||||    
T  9208250 aagaggagtgttatttgaacaaccaatttggttgacaacttttgtgacaactataatatataaagaaaaagtaggtatttgcacgtaaaccaaaacaata 9208151  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaagta 235  Q
     |||||||||         | ||||||||| ||||||  ||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||    
T  9208150 gagagataaa---taaaaataatgtgagtatgagagatgaagttgtcacaaaaattgtcattaaatggatgttcaaatatcatttctctaaagta 9208059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 229
Target Start/End: Complemental strand, 4994562 - 4994380
Alignment:
Q  46 aagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagag 145  Q
    ||||||||||||||||| |||  |||||||||| ||  |||||| ||||||||||| ||||||||| || |||||||||||||| |||| ||||| ||||    
T  4994562 aagtgttatttgaacaaccaaattggttgacaacttacgtgacacccataatttataaagaaaaagtagatatttgcacggaaaccaaatcaatagagag 4994463  T
Q  146 ataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||       | ||||||||| |||||| |||||| |||||||||||||||  |||||||| || || ||||||||||||    
T  4994462 ataaagt-aaaaaataatgtgagtatgagagataaagttatcacaaaaattgtcaacaaatggatgtttaaatatcatttctct 4994380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 228
Target Start/End: Complemental strand, 2733167 - 2732988
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| ||||  |||| ||||||| |||||||| |||||||||| ||||||||| ||||||||||||||||| ||||  |||| |||||    
T  2733167 agtgttatttgaacaaccaattcggttaacaatttttgtgacaatcataatttataaagaaaaagtaggtatttgcacggaaaccaaaataatagagaga 2733068  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||       | ||||||||| |||||| ||||||||||||||| || ||  ||||| ||| ||||| |||||||||||    
T  2733067 taaagt--aaaaataatgtgagtatgagagaaaaagttgtcacaaaagttatcgttaaatagatgttcaaatatcatttctc 2732988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 47 - 230
Target Start/End: Complemental strand, 38234190 - 38234005
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaa---aagaaggtatttgcacggaaatcaaagcaataaag 143  Q
    |||||||||||||||| |||| |||||||||| |||||||||||||||||||||| || |||   ||  ||||||||||||||||| ||||| |||| ||    
T  38234190 agtgttatttgaacaaccaatttggttgacaacttgtgtgacaaccataatttataaaaaaaatcaaataggtatttgcacggaaaccaaagtaatagag 38234091  T
Q  144 agataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    |||||||||       ||||||||||| |||||||||||||||||||||| || |||  |||| ||| ||||| ||| |||| ||||    
T  38234090 agataaagt-aaaaaattatgtgagtatgagagagaaagttgtcacaaaagttatcatcaaatagatgttcaaatataatttatcta 38234005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 45 - 228
Target Start/End: Original strand, 38708184 - 38708367
Alignment:
Q  45 gaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaaga 144  Q
    |||||||||||||||||| |||| || |||||||||| |||||||||||||||||   ||||||||  || ||||||||||||||||||| ||||  |||    
T  38708184 gaagtgttatttgaacaaccaatttgattgacaatttatgtgacaaccataatttgcaaagaaaaaatagatatttgcacggaaatcaaaacaatggaga 38708283  T
Q  145 gataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||       | |||||||||  ||| ||||| |||| ||||||||| |||| |||| ||| ||||| |||||||||||    
T  38708284 gataaagtaaaaaaataatgtgagtataagaaagaaaattgttacaaaaattatcaccaaatagatgttcaaatatcatttctc 38708367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 39 - 230
Target Start/End: Complemental strand, 16966972 - 16966783
Alignment:
Q  39 taaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaa 138  Q
    ||||||| |||||||||||||||| |||| |||| || || || | ||||||||||| ||||  ||||||||   |||||| ||||||||| || |||||    
T  16966972 taaagaggagtgttatttgaacaaccaatttggt-gaaaacttatttgacaaccatactttacaaagaaaaaagtggtattggcacggaaaccatagcaa 16966874  T
Q  139 taaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    || |||||||||||       | ||||||||| |||||||||||||||  ||||| |||||||||||||||| ||||| |||||||||||||    
T  16966873 tagagagataaagtagaaaa-taatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctcta 16966783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 42 - 188
Target Start/End: Complemental strand, 28646857 - 28646711
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| |||| || ||||||| || ||||| ||||||||||||| ||||||||| || |||||| ||| ||| |||||||| |     
T  28646857 agaggagtgttatttgaacaaccaatttgattgacaacttatgtgataaccataatttataaagaaaaagtagatatttgtacgaaaaccaaagcaacag 28646758  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtca 188  Q
    |||||||||||       ||||||||||| |||||||||||||||||    
T  28646757 agagataaagtaaaaaaattatgtgagtatgagagagaaagttgtca 28646711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 42 - 188
Target Start/End: Complemental strand, 28651441 - 28651295
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| |||| || ||||||| || ||||| ||||||||||||| ||||||||| || |||||| ||| ||| |||||||| |     
T  28651441 agaggagtgttatttgaacaaccaatttgattgacaacttatgtgataaccataatttataaagaaaaagtagatatttgtacgaaaaccaaagcaacag 28651342  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtca 188  Q
    |||||||||||       ||||||||||| |||||||||||||||||    
T  28651341 agagataaagtaaaaaaattatgtgagtatgagagagaaagttgtca 28651295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 228
Target Start/End: Original strand, 1633776 - 1633961
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| |||| |||| ||||| || | ||||||||||| ||||  ||||||||   |||||| |||| |||| || |||||||    
T  1633776 aagaggagtgttatttgaacaaccaatttggt-gacaacttatttgacaaccatactttacaaagaaaaaagtggtattggcacagaaaccatagcaata 1633874  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
     |||||||||||       | ||||||||| |||||||||||||||  ||||| |||||||||||||||| ||||| |||||||||||    
T  1633875 gagagataaagtaaaaaa-taatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctc 1633961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 228
Target Start/End: Original strand, 16872042 - 16872227
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| || ||||||||||||| || | ||||| |||| || || |||||||||||||||  |||||||||  | |||||||||| ||||||||||||||    
T  16872042 aagaggagggttatttgaacaaccatt-tggttaacaacttttgggacaaccataatttacaaagaaaaagttgatatttgcacgaaaatcaaagcaata 16872140  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
     |||||||||||       | ||||||||| || ||||||||||||  ||||| ||||||| |||||||| ||||| |||||||||||    
T  16872141 gagagataaagt-aaaaagtaatgtgagtatgatagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctc 16872227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 52 - 229
Target Start/End: Complemental strand, 41600482 - 41600308
Alignment:
Q  52 tatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaag 151  Q
    ||||||||||| |||| ||| |||||| ||  ||||||| ||||||||   |||| |||| |  |||||||||||||| |||||||||| ||||||||||    
T  41600482 tatttgaacaaacaatttggctgacaacttaagtgacaatcataatttgcaaagataaagtacatatttgcacggaaaccaaagcaatagagagataaag 41600383  T
Q  152 tnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
            | ||||||||| |||||||||||||||||||||| |||||| |||||| || ||||| ||||||||||||    
T  41600382 ---caaaatgatgtgagtatgagagagaaagttgtcacaaaagttgtcaataaatgaatgttcaaatatcatttctct 41600308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 231
Target Start/End: Complemental strand, 31597127 - 31596945
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | || |||| || || || ||||| |||||||||  |||||||||  |||||||||||  ||| |||| ||||| |||||    
T  31597127 agtgttatttgaacaaccatt-tgattgataacttttgagacaatcataatttacaaagaaaaagttggtatttgcacaaaaaccaaaacaatagagaga 31597029  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    ||||||       | ||||||||| |||||||| ||||||||||||||||||||  |||||||| ||||| ||||||||||||||    
T  31597028 taaagtaaaaag-taatgtgagtatgagagagagagttgtcacaaaaattgtcataaaatggatgttcaaatatcatttctctaa 31596945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 42 - 229
Target Start/End: Original strand, 6991694 - 6991880
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| ||||   |||||||| || | ||||||||||| ||||  ||||||||| || ||| |||||  ||| |||||||| |     
T  6991694 agaggagtgttatttgaacaaacaattcagttgacaacttatatgacaaccatattttacaaagaaaaagtagttatatgcacaaaaaccaaagcaaaag 6991793  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||||       | ||||||||| |||||||||| || |||||||||||||||| |||| ||| ||||| ||||||||||||    
T  6991794 agagataaagtaaaaaa-taatgtgagtatgagagagaaaattatcacaaaaattgtcaccaaatagatgttcaaatatcatttctct 6991880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 35031397 - 35031493
Alignment:
Q  55 ttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagt 152  Q
    |||||||| |||| ||||||||||||| ||||| ||| ||||||||  ||||||||| || ||||||||||||||||||||||||| |||||||||||    
T  35031397 ttgaacaaccaatttggttgacaattt-tgtgataactataatttacaaagaaaaagtagatatttgcacggaaatcaaagcaatagagagataaagt 35031493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 85 - 228
Target Start/End: Original strand, 45529175 - 45529317
Alignment:
Q  85 tgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagtt 184  Q
    ||||||||||| ||||  ||||||||   |||||| ||||||||| || ||||||| |||||||||||       | ||||||||| |||||||||||||    
T  45529175 tgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaaa-taatgtgagtatgagagagaaagtt 45529273  T
Q  185 gtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    || |||||||||||||||||||| || ||||| |||||||||||    
T  45529274 gttacaaaaattgtcactaaatgaatgttcaaatatcatttctc 45529317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 30439398 - 30439542
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | ||||||| || || ||||||||||||||||||  ||||||||    ||||||||||| |||||||||||||| |||||    
T  30439398 agtgttatttgaacaaccatt-tggttgataacttatgtgacaaccataatttacaaagaaaaaatgagtatttgcacgaaaatcaaagcaatagagaga 30439496  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    ||||||       | ||||||||| ||||||||||||||||||||||    
T  30439497 taaagt-aaaaaataatgtgagtatgagagagaaagttgtcacaaaa 30439542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 228
Target Start/End: Complemental strand, 34718256 - 34718115
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    |||||||||||||| | |||||| |  ||||||||| ||  |||||||||||||| |||||||||||       | ||||||||| ||||||||||||||    
T  34718256 gacaaccataatttgtaaagaaagaataggtatttgtacaaaaatcaaagcaatagagagataaagtaaaaaa-taatgtgagtatgagagagaaagttg 34718158  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    | |||||| ||||||| |||||||| ||||| |||||||||||    
T  34718157 taacaaaagttgtcacaaaatggatgttcaaatatcatttctc 34718115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 41 - 152
Target Start/End: Original strand, 36885374 - 36885484
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| || | |||| ||||| || || |||||||||||||||  ||||||||| |||||||  |||| ||||||||||||||    
T  36885374 aagaggagtgttatttgaacaaccatt-tggtggacaacttatgggacaaccataatttacaaagaaaaagtaggtattgacacgaaaatcaaagcaata 36885472  T
Q  141 aagagataaagt 152  Q
    ||||||||||||    
T  36885473 aagagataaagt 36885484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 3946306 - 3946237
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||||| ||||| ||||||||||||||    
T  3946306 atgtgagtatgagagagaaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttctctaa 3946237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 1871507 - 1871686
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| || || |||| || | ||||||||||||||||  |||||||||  | |||| ||||||||| || | ||||| |||||    
T  1871507 agtgttatttgaacaaccaatttgatt-acaacttatttgacaaccataatttacaaagaaaaagttg-tattcgcacggaaaccataacaatagagaga 1871604  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||       | ||||||||| ||||||||| |||||||||||| ||||||| |||||||| || || ||||||||||||    
T  1871605 taaagtgaaaaa-taatgtgagtatgagagagaatgttgtcacaaaatttgtcaccaaatggatgttaaaatatcatttctct 1871686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 229
Target Start/End: Complemental strand, 12783897 - 12783765
Alignment:
Q  95 aatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaa 194  Q
    ||||||| ||||||||  ||||||||| ||||||| |||| ||||| |||||||||||       | |||||| ||  ||||| ||||||||||||||||    
T  12783897 aatttataaagaaaaaataggtatttgtacggaaaccaaaacaatagagagataaagtaaaaa--taatgtgaataaaagagataaagttgtcacaaaaa 12783800  T
Q  195 ttgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||| ||||||||| ||||| ||||||||||||    
T  12783799 ttgtcattaaatggatgttcaaatatcatttctct 12783765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 41159820 - 41159961
Alignment:
Q  87 acaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgt 186  Q
    ||||||||||||||  ||||||||  ||||||||||||| ||| |||||||||| |||||||||||       | ||||||||| |||||||||||||||    
T  41159820 acaaccataatttacaaagaaaaaataggtatttgcacgaaaaccaaagcaatagagagataaagt-aaaaaataatgtgagtatgagagagaaagttgt 41159918  T
Q  187 cacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||| ||||| | ||||  || ||||| |||| |||||||    
T  41159919 cacaaaagttgtcgcaaaatatatattcaaatatcgtttctct 41159961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 42569616 - 42569725
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| ||| |||||||||||| || | ||||||| ||||| |  |||||||||||||||| |||||||||  | ||||| |||| |||||||||||||||    
T  42569616 agaggagtattatttgaacaaccatt-tggttgataatttttaggacaaccataatttataaagaaaaagttgatatttacacgaaaatcaaagcaataa 42569714  T
Q  142 agagataaagt 152  Q
    |||||||||||    
T  42569715 agagataaagt 42569725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 47 - 210
Target Start/End: Original strand, 7955899 - 7956060
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||||||| |||| ||||| || | ||||||||||| ||||  ||||||||   |||||| || |||||| || ||||||| |||||    
T  7955899 agtgttatttgaacaatcaatttggt-gacaacttatttgacaaccatattttacaaagaaaaaagtggtattggcgcggaaaccatagcaatagagaga 7955997  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggat 210  Q
    ||||||       | ||||||||| |||||||||||||||  ||||| ||||| ||||||||||    
T  7955998 taaagt-aaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgtccctaaatggat 7956060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 232
Target Start/End: Original strand, 32843828 - 32844015
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| |||| |||| ||||| || | ||||||||||| ||||  ||||||||   |||||| ||||||||| || |||||||    
T  32843828 aagaggagtgttatttgaacaaccaatttggt-gacaacttatttgacaaccatactttacaaagaaaaaagtggtattggcacggaaaccatagcaata 32843926  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
     |||||||||||       | ||||||||| |||||| ||||||||  | ||| ||||||||||||| || ||||| ||| |||||||||||    
T  32843927 gagagataaagt--aaaaataatgtgagtaagagagaaaaagttgttgc-aaagttgtcactaaatgaatgttcaaatataatttctctaaa 32844015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 152
Target Start/End: Original strand, 36424497 - 36424598
Alignment:
Q  51 ttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaa 150  Q
    ||||||||||||  ||| || |||| || || ||||||||||||||||||| ||||||||  | ||||||||||||||| |||| ||||| |||||||||    
T  36424497 ttatttgaacaactaatttgattgataacttttgtgacaaccataatttataaagaaaaaatatgtatttgcacggaaaccaaaacaatagagagataaa 36424596  T
Q  151 gt 152  Q
    ||    
T  36424597 gt 36424598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 47 - 230
Target Start/End: Complemental strand, 36531773 - 36531593
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||||||| |||| || ||| | | |||||| || ||||||  ||||||||| || |||| |||||||||||| | ||||| |||||    
T  36531773 agtgttatttgaacaatcaatttggt-gataatctatttgacaatcaaaatttacaaagaaaaagtag-tattggcacggaaatcataacaatagagaga 36531676  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||       | || |||||| || ||| ||||||||||||| | ||||||| |||||||| ||||| |||||||||||||    
T  36531675 taaagtaaaaaa-taatatgagtatgaaagaaaaagttgtcacaatagttgtcaccaaatggatgttcaaatatcatttctcta 36531593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 228
Target Start/End: Complemental strand, 16613775 - 16613634
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    ||||| |||||||| | |||||| |  ||||||||||||  |||||||||||||| |||||||||||       | ||||||||| |||||| |||||||    
T  16613775 gacaatcataatttgtaaagaaagaataggtatttgcacaaaaatcaaagcaatagagagataaagtaaaaaa-taatgtgagtatgagagaaaaagttg 16613677  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |  ||||||||||||| |||| ||| ||||| |||||||||||    
T  16613676 tagcaaaaattgtcacaaaatagatgttcaaatatcatttctc 16613634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 228
Target Start/End: Complemental strand, 29991552 - 29991412
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    |||||||| |||||   ||||||||  ||||||| ||||| |||||||||||||| |||||||||||       | ||||||||| || |||||||||||    
T  29991552 gacaaccaaaatttgcaaagaaaaaataggtatt-gcacgaaaatcaaagcaatagagagataaagtaaaaaa-tgatgtgagtatgaaagagaaagttg 29991455  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    | |||||| ||||||| |||||||| ||||| |||||||||||    
T  29991454 taacaaaagttgtcacaaaatggatgttcaaatatcatttctc 29991412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 229
Target Start/End: Complemental strand, 36110324 - 36110137
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||||||||| |||| ||| |||||| || | ||||||||||| ||||  ||||||||   |||||| ||||| ||| || | ||||    
T  36110324 aaagaggagtgttatttgaacaaccaatttgg-tgacaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacgaaaaccataacaat 36110226  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    | |||||||||||       | ||||||||| || ||||||| ||||  ||||| || ||||||||||||| ||||| ||||||||||||    
T  36110225 agagagataaagt-aaaaagtaatgtgagtatgaaagagaaaattgttgcaaaagttttcactaaatggatgttcaaatatcatttctct 36110137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 216
Target Start/End: Original strand, 37783863 - 37784030
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||| ||| |||| |||| ||||| || | ||||||||||| ||||  |||||||||  ||||||  ||||||||||  ||||||| |||||    
T  37783863 agtgttatttgatcaaccaatttggt-gacaacttatttgacaaccatattttacaaagaaaaaggtggtattgacacggaaatcctagcaatagagaga 37783961  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaa 216  Q
    ||||||       | || |||||| |||||||||||||||  ||||| |||||||||||||||| |||||    
T  37783962 taaagt-aaaaagtaatctgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaa 37784030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 228
Target Start/End: Complemental strand, 7478965 - 7478780
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| ||||||||||||||||  ||| || |||||||  | | |||||| |||||||||  ||||||||| || |||| ||||||||| || ||||||    
T  7478965 aaagaggagtgttatttgaacaactaatttg-ttgacaacctatttgacaatcataatttacaaagaaaaagtag-tattggcacggaaaccatagcaat 7478868  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    | |||||||| ||       | ||||||||| |||||||| |||||||| || ||||||||  |||||||| ||||| |||||||||||    
T  7478867 agagagataaggtaaaaaa-taatgtgagtatgagagagatagttgtcataataattgtcagcaaatggatgttcaaatatcatttctc 7478780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 34591449 - 34591340
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| ||||||||||||||||||||| |||| ||||| || | ||||||||||| ||||  ||||||||   ||||||  |||||||| || |||||||    
T  34591449 aagaggagtgttatttgaacaatcaatttggt-gacaacttatttgacaaccatactttacaaagaaaaaagtggtattgacacggaaaccatagcaata 34591351  T
Q  141 aagagataaag 151  Q
    |||||||||||    
T  34591350 aagagataaag 34591340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 9549204 - 9549273
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    ||||||||| |||||||||| ||||||||||| ||||||| |||||||| ||||| |||||||| |||||    
T  9549204 atgtgagtatgagagagaaaattgtcacaaaagttgtcacaaaatggatgttcaaatatcatttttctaa 9549273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 228
Target Start/End: Complemental strand, 11017990 - 11017805
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| ||||||||||||||||| ||| |||| ||||| || | ||||||| ||| ||||  ||||||||   |||||| ||| |||||  | | |||||    
T  11017990 aagaggagtgttatttgaacaattaatttggt-gacaacttatttgacaactatattttacaaagaaaaaagtggtattggcatggaaacgataacaata 11017892  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
     |||||||||||       | ||||||||| |||||||||||||||  ||||| |||||| ||||||||| ||||| |||||||||||    
T  11017891 gagagataaagtaaaaaa-taatgtgagtatgagagagaaagttgttgcaaaagttgtcattaaatggatgttcaaatatcatttctc 11017805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 210
Target Start/End: Original strand, 32847571 - 32847740
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| ||||||||||||||||||||| ||| ||| || || | ||||||||||| ||||  ||||||||   ||||||  |||||||| || | ||||    
T  32847571 aaagaggagtgttatttgaacaatcaatttgg-tgataacttatttgacaaccatactttacaaagaaaaaagtggtattgccacggaaaccacaacaat 32847669  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggat 210  Q
    | ||| |||||||       | |||||||||  ||||||||||||||  ||||| ||||||||||||||||    
T  32847670 agagaaataaagtaaaaaaataatgtgagtataagagagaaagttgttgcaaaagttgtcactaaatggat 32847740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 206
Target Start/End: Complemental strand, 37597417 - 37597260
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||||| | | |||||||| || |  |||||||||||||||  ||||||| | ||| |||| |||| |||||||||||||| ||| |    
T  37597417 agtgttatttgaacaatca-tatagttgacaacttataagacaaccataatttacaaagaaaaggtagggatttacacgaaaatcaaagcaatagagaaa 37597319  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaat 206  Q
    ||||||       | ||||||||| || ||||||||||||||||| |||| |||| ||||    
T  37597318 taaagt-aaaaaataatgtgagtatgaaagagaaagttgtcacaataattatcacaaaat 37597260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 228
Target Start/End: Complemental strand, 7593029 - 7592849
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaa-ggtatttgcacggaaatcaaagcaataaagag 145  Q
    ||||||||||||||||||||| |||| ||||| || | |||||| |||| ||||| || ||||  || ||||||  |||||||| || ||||||| ||||    
T  7593029 agtgttatttgaacaatcaatatggt-gacaacttatttgacaatcatactttataaaaaaaataaatggtattgacacggaaaccatagcaatagagag 7592931  T
Q  146 ataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||||       | |||||| || |||||| ||||||||  ||||| ||||||||||||| || ||||| |||||||||||    
T  7592930 ataaagtaaaaaa-taatgtgactatgagagataaagttgttgcaaaagttgtcactaaatgaatgttcaaatatcatttctc 7592849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 228
Target Start/End: Original strand, 14707235 - 14707415
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| | || |||| ||||| || || ||||| |||||||||  ||||||||| |||||||  || | ||||||||||||||  ||||    
T  14707235 agtgttatttgaacaa-ctatttggtggacaacttatgagacaatcataatttacaaagaaaaagtaggtattgacaagaaaatcaaagcaatagggaga 14707333  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||       | |||| | || |||| |||||||| |||||||| ||||||  ||||| || ||||| |||||||||||    
T  14707334 taaagtaaaaaaataatgtaaatatgagaaagaaagttatcacaaaagttgtcaaaaaatgaatgttcaaatatcatttctc 14707415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 35564468 - 35564288
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||  ||| | || ||||| || | ||||||||||| ||||  ||||||||   |||||| |||| ||||| | ||||||| | |||    
T  35564468 agtgttatttgaacaactaatttagt-gacaacttatttgacaaccatactttacaaagaaaaaagtggtattggcacagaaattatagcaatagataga 35564370  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||       | ||||||||| |||| ||||||||||  |||||||| ||||||||||||| ||||| ||||||||||||    
T  35564369 taaagtaaaaaa-taatgtgagtatgagatagaaagttgttgcaaaaattatcactaaatggatgttcaaatatcatttctct 35564288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 229
Target Start/End: Original strand, 4658211 - 4658335
Alignment:
Q  104 agaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcacta 203  Q
    ||||||||  |||||||||||  ||| |||||||||| |||||||||||       | |||| |||| |||||| ||||||||||||||| ||||||  |    
T  4658211 agaaaaagttggtatttgcacaaaaaccaaagcaatagagagataaagtaaaaag-taatgtaagtatgagagaaaaagttgtcacaaaagttgtcataa 4658309  T
Q  204 aatggatcttcaagtatcatttctct 229  Q
    ||||||| ||||| ||||||||||||    
T  4658310 aatggatgttcaaatatcatttctct 4658335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 230
Target Start/End: Complemental strand, 8645322 - 8645163
Alignment:
Q  69 tggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgag 168  Q
    ||||||| || || ||||| || |||| ||||  ||||||||  | ||||||||| ||||| |||| ||||| |||||||||||       | || ||||    
T  8645322 tggttgataacttatgtgataatcatattttacaaagaaaaaataagtatttgcatggaaaccaaaacaatagagagataaagtaaaaa--tgatatgag 8645225  T
Q  169 tacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    || |||||||||| ||||| |||||||| |||| |||||||| ||||| |||||||||||||    
T  8645224 tatgagagagaaaattgtcccaaaaattatcaccaaatggatgttcaaatatcatttctcta 8645163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 228
Target Start/End: Complemental strand, 13971236 - 13971125
Alignment:
Q  115 gtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttc 214  Q
    ||||| ||||||||| || ||||||| |||||||||||       | |||||||||||||||||||||||||||||||| |||| |  |||||||| |||    
T  13971236 gtattggcacggaaaccatagcaatatagagataaagttcaaac-taatgtgagtacgagagagaaagttgtcacaaaagttgt-atgaaatggatgttc 13971139  T
Q  215 aagtatcatttctc 228  Q
    || |||||||||||    
T  13971138 aaatatcatttctc 13971125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 228
Target Start/End: Complemental strand, 12707334 - 12707149
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaa-gaaggtatttgcacggaaatcaaagcaata 140  Q
    |||| |||||||||||||||| || | |||||||  | || || |||||||||||||||  |||||||| |  ||||||| |||| ||| |||| |||||    
T  12707334 agaggagtgttatttgaacaaccatt-tggttgagcacttatgggacaaccataatttacaaagaaaaaagttggtatttacacgaaaaccaaaacaata 12707236  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
     ||||||||| |       | | ||||||| |||||||||||||||| ||||| ||||||  |||||||| ||||| |||||||||||    
T  12707235 gagagataaa-ttaaaaagtaacgtgagtatgagagagaaagttgtcgcaaaagttgtcataaaatggatgttcaaatatcatttctc 12707149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 5277663 - 5277776
Alignment:
Q  115 gtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttc 214  Q
    ||||||||||| |||||||||||||| ||||||||| |       | ||||||||| |||||||||| ||||  ||||  ||||||| |||||||| |||    
T  5277663 gtatttgcacgaaaatcaaagcaatagagagataaaataaaaaa-taatgtgagtatgagagagaaaattgtagcaaaggttgtcacaaaatggatgttc 5277761  T
Q  215 aagtatcatttctct 229  Q
    || ||||||||||||    
T  5277762 aaatatcatttctct 5277776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 228
Target Start/End: Original strand, 5600957 - 5601058
Alignment:
Q  127 aaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttc 226  Q
    |||||||||||||||||||| |||||       | ||||||||| |||||| ||| ||||||||||| ||||||  |||||| | ||||| |||||||||    
T  5600957 aaatcaaagcaataaagagagaaagtagaataatcatgtgagtatgagagaaaaaattgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 5601056  T
Q  227 tc 228  Q
    ||    
T  5601057 tc 5601058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 228
Target Start/End: Complemental strand, 5639663 - 5639562
Alignment:
Q  127 aaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttc 226  Q
    |||||||||||||||||||| |||||       | ||||||||| |||||| ||| ||||||||||| ||||||  |||||| | ||||| |||||||||    
T  5639663 aaatcaaagcaataaagagagaaagtagaataatcatgtgagtatgagagaaaaaattgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 5639564  T
Q  227 tc 228  Q
    ||    
T  5639563 tc 5639562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 5864372 - 5864285
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaag 135  Q
    |||||||||||||||| |||| |  |||| || || |||||||| |||||||||| ||||||| | ||||||||||||||||| |||||    
T  5864372 agtgttatttgaacaaccaatttaattgataactt-tgtgacaatcataatttataaagaaaaggtaggtatttgcacggaaaacaaag 5864285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 10644694 - 10644873
Alignment:
Q  48 gtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataa-tttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||| || | || | ||||| || | |||||||||||| ||||  ||| ||||| |||| || ||||| |||| ||||||||| |||||    
T  10644694 gtgttatttgaacaaccatt-tgatagacaacttatttgacaaccataaatttacaaaggaaaagtaggttttggcacgaaaattaaagcaatagagaga 10644792  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||       | |||||| || |||||||||||||||||||||| |||| || |||||| | | ||| |||||||||||    
T  10644793 taaagtaaaaacat-atgtgattatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctc 10644873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 228
Target Start/End: Original strand, 25987757 - 25987858
Alignment:
Q  127 aaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttc 226  Q
    |||||||||||||| |||||||||||       | ||||||||| |||||| ||||||||||||||| |||| |  |||||| | ||||| |||||||||    
T  25987757 aaatcaaagcaatagagagataaagtagaatgataatgtgagtatgagagataaagttgtcacaaaagttgtaaaaaaatggttgttcaaatatcatttc 25987856  T
Q  227 tc 228  Q
    ||    
T  25987857 tc 25987858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 36426027 - 36426091
Alignment:
Q  164 gtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||| ||| |||||||||||||||||| |||||  ||||||||| ||||| |||||||||||    
T  36426027 gtgagtatgagtgagaaagttgtcacaaaagttgtctttaaatggatgttcaaatatcatttctc 36426091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 27630962 - 27630896
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| ||||||||||||||||| |||||||||||  |||||||| | ||| ||||||||||||    
T  27630962 atgtgagtatgagagagaaagttgtca-aaaaattgtcataaaatggatgtacaaatatcatttctct 27630896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 33100474 - 33100541
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| |||||||||||||||||||||| |||| |  |||||| | ||||| ||||||||||||    
T  33100474 atgtgagtatgagagagaaagttgtcacaaaagttgttataaaatggttgttcaaatatcatttctct 33100541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 33589235 - 33589302
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| |||||||||| ||||  ||||| |||||||||||||||| || || ||||||||||||    
T  33589235 atgtgagtatgagagagaaaattgttgcaaaagttgtcactaaatggatgttgaaatatcatttctct 33589302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 39543452 - 39543519
Alignment:
Q  85 tgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagt 152  Q
    |||||| |||||||||  ||||||||  | ||||||||||||||| |||||||||| |||||||||||    
T  39543452 tgacaatcataatttacaaagaaaaaataagtatttgcacggaaaacaaagcaatagagagataaagt 39543519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 41521034 - 41520967
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| |||||||||| ||||  ||||| || ||||||||||||| ||||| ||||||||||||    
T  41521034 atgtgagtatgagagagaaaattgttgcaaaagttatcactaaatggatgttcaaatatcatttctct 41520967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 7598774 - 7598708
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||||| ||||||||| ||||||  |||||| | ||||| |||||||||||    
T  7598774 atgtgagtatgagagagaaagtggtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 7598708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 18651436 - 18651370
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||| ||||||||||| |||| || |||| ||| ||||| |||||||||||    
T  18651436 atgtgagtatgagagagaaaattgtcacaaaagttgttaccaaatagatgttcaaatatcatttctc 18651370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 26026962 - 26026896
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||| ||||||||||||||||| ||||||  |||||| | ||||| |||||||||||    
T  26026962 atgtgagtatgagaaagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 26026896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 39453337 - 39453403
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagt 152  Q
    ||||||||||||||   |||||| | || ||||||||||| |||||||||||| |||||||||||||    
T  39453337 gacaaccataatttgcaaagaaagaaaatgtatttgcacgaaaatcaaagcaagaaagagataaagt 39453403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 193
Target Start/End: Original strand, 7472918 - 7473062
Alignment:
Q  46 aagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagag 145  Q
    ||||||||||||||||| | || |||||||||| || |   | ||||||||||||  |||||||| | |||||||||||| |||  ||||||||| ||||    
T  7472918 aagtgttatttgaacaa-ctatttggttgacaacttttagaataaccataatttacaaagaaaaata-ggtatttgcacgaaaactaaagcaatagagag 7473015  T
Q  146 ataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    |||||||       | ||||||||| |||||||||||||| |||||||    
T  7473016 ataaagt-aaaaagtaatgtgagtatgagagagaaagttgacacaaaa 7473062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 28772139 - 28772196
Alignment:
Q  172 gagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||||||| |||||||||||||||  |||||| | ||||| ||||||||||||    
T  28772139 gagagagaaagttatcacaaaaattgtcaaaaaatggttgttcaaatatcatttctct 28772196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 42110074 - 42110179
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||  ||| |||||||||| || |||||| | |||||||||  |||||||||   ||||||| | ||||| |||| ||||| ||| |    
T  42110074 agtgttatttgaacaactaatttggttgacaacttatgtgacgatcataatttacaaagaaaaagttagtatttgtatggaaaccaaaacaatagagaaa 42110173  T
Q  147 taaagt 152  Q
    ||||||    
T  42110174 taaagt 42110179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 44061783 - 44061718
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
    ||||||||| |||||||||||||||||||||| || |||  |||||| | ||||| ||||||||||    
T  44061783 atgtgagtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttct 44061718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 228
Target Start/End: Original strand, 12734899 - 12735083
Alignment:
Q  43 gagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaa 142  Q
    |||| |||||||||||||||| ||| ||  ||| ||||| ||||||||| | || ||  |||  ||||| |||||||  |||  ||||||||| |||| |    
T  12734899 gagatgtgttatttgaacaat-aatttgtatgataatttatgtgacaactaaaaatttacaatgaaaagtaggtattgacacaaaaatcaaagtaatata 12734997  T
Q  143 gagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||| ||       | || |||||| |||||||||| ||||||||||| ||||||  |||||| ||||||  |||||||||||    
T  12734998 gagataaggtaaaaacataatatgagtatgagagagaaaattgtcacaaaagttgtcataaaatggctcttcatatatcatttctc 12735083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 13970982 - 13970918
Alignment:
Q  165 tgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||| |||||||||||||||||||||| |||| |  |||||||| | ||| ||||||||||||    
T  13970982 tgagtatgagagagaaagttgtcacaaaagttgttaggaaatggatgtacaaatatcatttctct 13970918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 230
Target Start/End: Original strand, 30135900 - 30136088
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgt-gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    ||||| |||||||||||||||| |||| |||| ||||| || | | |||||||||| ||||  |||||| |   ||||||  |||||||| || || |||    
T  30135900 aagaggagtgttatttgaacaaccaatttggt-gacaacttattttgacaaccatattttacaaagaaagaagtggtattgacacggaaaccatagtaat 30135998  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    |||||||||||||       | |||||| || |||||||||||||||  ||||| |||||| |||||  || ||||| |||||||||||||    
T  30135999 aaagagataaagtaaaaag-taatgtgaatatgagagagaaagttgttgcaaaagttgtcattaaataaatgttcaaatatcatttctcta 30136088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 1068672 - 1068605
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||| ||| |||||||||||||||||||||| ||||||  || ||| | ||||| ||||||||||||    
T  1068672 atgtgtgtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttctct 1068605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 5864269 - 5864202
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||| || |||||||||| |||| ||||||||| |||||| ||| || ||||| ||||||||||||    
T  5864269 atgtgattatgagagagaaaattgttacaaaaattatcactagatgaatgttcaaatatcatttctct 5864202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 9314477 - 9314411
Alignment:
Q  161 tatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||||||| ||||||||| ||||| |||||||||||||  |||||||| | ||| |||||||||||    
T  9314477 tatgtgagtatgagagagaaggttgt-acaaaaattgtcataaaatggatgtacaaatatcatttctc 9314411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 12045659 - 12045725
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| ||||||||||||||||  |||| |||||||||||||| | | ||| ||||||||||||    
T  12045659 atgtgagtatgagagagaaagttgtc-taaaagttgtcactaaatggttgtacaaatatcatttctct 12045725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 227
Target Start/End: Original strand, 16327039 - 16327222
Alignment:
Q  43 gagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaag-gtatttgcacggaaatcaaagcaataa 141  Q
    ||||||||||||||||||||||| | || || | ||||| ||  ||||| ||||||||  ||||||||  || ||||||||| | ||| ||||  ||||     
T  16327039 gagaagtgttatttgaacaatcatt-tgattaataatttttggaacaactataatttacaaagaaaaaatagtgtatttgcaagaaaaccaaaataatag 16327137  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
    |||||||||||       | ||||||||| |||||||||||||||| ||||| ||||| | |||| ||| || || ||||||||||    
T  16327138 agagataaagtaaaaag-taatgtgagtatgagagagaaagttgtcgcaaaagttgtcgcaaaatagatatttaaatatcatttct 16327222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 29028892 - 29028955
Alignment:
Q  87 acaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaa 150  Q
    |||| |||||||| | ||||||||  ||||||||||||  |||||||||||||| |||||||||    
T  29028892 acaatcataatttgtaaagaaaaaataggtatttgcacaaaaatcaaagcaatagagagataaa 29028955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 30927940 - 30928006
Alignment:
Q  165 tgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    |||||| ||||||||||||||| |||||||||||||| || ||| | | ||| |||||||||||||||    
T  30927940 tgagtatgagagagaaagttgt-acaaaaattgtcacaaattggttgtacaaatatcatttctctaaa 30928006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 201
Target Start/End: Original strand, 33958114 - 33958153
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcac 201  Q
    |||||| |||||||||||||||||||| ||||||||||||    
T  33958114 atgtgaatacgagagagaaagttgtcaaaaaaattgtcac 33958153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 35067226 - 35067159
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| |||||||||||||||||||||| |||| |  |||||| | | ||| ||||||||||||    
T  35067226 atgtgagtatgagagagaaagttgtcacaaaagttgttaagaaatggttgtacaaatatcatttctct 35067159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 44064423 - 44064360
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcattt 225  Q
    ||||||||| || |||||| ||||| |||||||||||||| |||| ||| ||||| ||||||||    
T  44064423 atgtgagtatgaaagagaaggttgttacaaaaattgtcacaaaatagatgttcaaatatcattt 44064360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 198
Target Start/End: Complemental strand, 6440182 - 6440111
Alignment:
Q  127 aaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    |||||||||||| ||||||| |||||       | ||||||||| |||||||||||||||||||||| ||||    
T  6440182 aaatcaaagcaagaaagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgt 6440111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 25830251 - 25830317
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||||||||||||||| |||| |  |||||| | | ||| |||||||||||    
T  25830251 atgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctc 25830317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 27325823 - 27325758
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||||||||||||||| |||| |  |||||| | ||||| |||||||||||    
T  27325823 atgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttctc 27325758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 32175019 - 32174954
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| ||||||||||||||||| |||||||||||| || ||||| | | | |||||||||||    
T  32175019 atgtgagtatgagagagaaagttgtca-aaaaattgtcacaaagtggatgtacgaatatcatttctc 32174954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 33451568 - 33451606
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtca 200  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  33451568 atgtgagtatgagagagaaagttgtcacaaaagttgtca 33451606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 41542015 - 41541892
Alignment:
Q  69 tggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgag 168  Q
    |||||||||| || || |||||||||||||||| || |||||  | ||||||||||  ||| ||| |||||| ||||||||| |       | |||||||    
T  41542015 tggttgacaacttatgggacaaccataatttataaataaaaaataagtatttgcacaaaaaccaatgcaatagagagataaaat-aaaaaataatgtgag 41541917  T
Q  169 tacgagagagaaagttgtcacaaaa 193  Q
    ||  |||||||||||||||||||||    
T  41541916 tataagagagaaagttgtcacaaaa 41541892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 42443169 - 42443100
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    ||||||||| ||||||||||||||||  |||| |||||||||||||  | | ||| |||||||||||||||    
T  42443169 atgtgagtatgagagagaaagttgtc-taaaagttgtcactaaatgattgtacaaatatcatttctctaaa 42443100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 42786665 - 42786731
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||||||  |||||||||||||||||||||||||| |  |||||| | | ||| |||||||||||    
T  42786665 atgtgagtataagagagaaagttgtcacaaaaattgtaagaaaatggttgtacaaatatcatttctc 42786731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 5771891 - 5771948
Alignment:
Q  172 gagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||| |||||| |||||| ||||||| |||||| | ||||| ||||||||||||    
T  5771891 gagagagagagttgttacaaaagttgtcacaaaatggttgttcaaatatcatttctct 5771948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 22706132 - 22706237
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||| ||||| |||| || ||||||| ||   |||||||||| |||||  ||||||||| | ||| ||||| ||||  |||| ||||| |||||    
T  22706132 agtgttattttaacaaccaatttgattgacaacttacttgacaaccatcatttacaaagaaaaagtaagtacttgcatggaagccaaaacaatagagaga 22706231  T
Q  147 taaagt 152  Q
    ||||||    
T  22706232 taaagt 22706237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 41659376 - 41659421
Alignment:
Q  183 ttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||||||||||| ||| ||||||||| ||||| |||||||||||    
T  41659376 ttgtcacaaaaattatcattaaatggatgttcaaatatcatttctc 41659421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 7777185 - 7777221
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    |||||||||  ||||||||||||||||||||||||||    
T  7777185 atgtgagtataagagagaaagttgtcacaaaaattgt 7777221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 40528813 - 40528749
Alignment:
Q  163 tgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
    |||||||| || |||||||||||||| |||| ||||||| |||| | | ||||| ||||||||||    
T  40528813 tgtgagtatgaaagagaaagttgtcataaaagttgtcacaaaatagttgttcaaatatcatttct 40528749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 9e-39; HSPs: 113)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 41 - 232
Target Start/End: Original strand, 9362564 - 9362753
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| |||| | ||||| || || ||||||||||||| ||||| ||||||||| |||||||||||||||||||||| |||||    
T  9362564 aagaggagtgttatttgaacaaccaatttagttgataacttttgtgacaaccatagtttataaagaaaaagtaggtatttgcacggaaatcaaaacaata 9362663  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
     |||||||||||       | || ||| || |||| ||||||||||||||||| |||||| ||||||||| ||||| |||||||||||||||    
T  9362664 gagagataaagt--aaaaataatatgaatatgagatagaaagttgtcacaaaagttgtcattaaatggatgttcaaatatcatttctctaaa 9362753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 229
Target Start/End: Complemental strand, 22819833 - 22819648
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| || | |||||||||| || || |||||||||||||||  |||||||||  |||||||||||| |||||||||||||||    
T  22819833 agaggagtgttatttgaacaaccatt-tggttgacaacttttgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaatcaaagcaataa 22819735  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||||       | ||||||||| |||||||||||||||  ||||| ||||||| |||||||| ||||| ||||||||||||    
T  22819734 agagataaagt-aaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctct 22819648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 51 - 228
Target Start/End: Complemental strand, 33860822 - 33860647
Alignment:
Q  51 ttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaa 150  Q
    |||||||||||| |||| || ||||||| ||  |||||||| ||||||||  ||||||||| | ||||||||||||||| |||| ||||| |||||||||    
T  33860822 ttatttgaacaaccaatttgattgacaacttacgtgacaacgataatttacaaagaaaaagtaagtatttgcacggaaaccaaaacaatagagagataaa 33860723  T
Q  151 gtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||       | ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||    
T  33860722 gtaaaaa--tgatgtgagtatgagagagaaagttgtcacaaaaattgtcaccaaatggatgttcaaatatcatttctc 33860647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 38715432 - 38715251
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||| ||||||| | || |||||||||||||| ||||||||||     
T  38715432 agagaagtgttatttgaacaatcaatttggttgacaacttgtgtgacaactataatttataaagaaaaggtagttatttgcacggaaaccaaagcaatag 38715333  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttc 226  Q
    ||||| ||| |       |||||||||||   |||||||| |||||||||||||| |||| ||||  || ||||| |||||||||    
T  38715332 agagaaaaaat-aaaaaattatgtgagta--tgagagaaaattgtcacaaaaattatcaccaaataaatgttcaaatatcatttc 38715251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 43 - 193
Target Start/End: Original strand, 28657329 - 28657477
Alignment:
Q  43 gagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaa 142  Q
    ||||||||||||||||||||  ||| |||||||||| || ||||||||||||||||||  ||||||| | ||||||||||||||||| |||||||||| |    
T  28657329 gagaagtgttatttgaacaacgaatttggttgacaactt-tgtgacaaccataatttacaaagaaaacgtaggtatttgcacggaaaccaaagcaataga 28657427  T
Q  143 gagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    ||||||||||       | ||||||||| ||||||||||||||||||||||    
T  28657428 gagataaagt-aaaaaataatgtgagtatgagagagaaagttgtcacaaaa 28657477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 47 - 231
Target Start/End: Original strand, 46405866 - 46406048
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||||| | ||||||| ||||| |  |||||||||||||||  |||||||||  |||||||||||| |||||||||||||| |||||    
T  46405866 agtgttatttgaacaatcatt-tggttgataattttttggacaaccataatttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagaga 46405964  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    ||||||       | ||||||||| |||||| ||||||||  ||||| ||||||| ||||| || ||||| ||||||||||||||    
T  46405965 taaagt-aaaaattaatgtgagtatgagagaaaaagttgttgcaaaagttgtcaccaaatgaatattcaaatatcatttctctaa 46406048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 53647311 - 53647421
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    ||||||||| |||||||||||||||| |||||||||| || ||||||||||||||||||| |||||||   ||||||||  ||||||||||||||||||     
T  53647311 agagaagtgatatttgaacaatcaatttggttgacaacttatgtgacaaccataatttataaagaaaagataggtatttatacggaaatcaaagcaatag 53647410  T
Q  142 agagataaagt 152  Q
    |||||||||||    
T  53647411 agagataaagt 53647421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 41 - 230
Target Start/End: Original strand, 39344866 - 39345053
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| || | ||||||| || || || ||||| |||||||||  ||||||||   |||||||||||| ||| ||||||||||    
T  39344866 aagaggagtgttatttgaacaaccatt-tggttgataacttttgagacaatcataatttacaaagaaaaaattggtatttgcacgaaaaccaaagcaata 39344964  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
     |||||||||||       | ||||||||| |||||||||||||||  ||||||||||||| |||||||| ||||| |||||||||||||    
T  39344965 gagagataaagtaaaaag-taatgtgagtatgagagagaaagttgttgcaaaaattgtcacaaaatggatgttcaaatatcatttctcta 39345053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 86 - 228
Target Start/End: Complemental strand, 21617324 - 21617183
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    |||||||||||||| | |||||| |  ||||||||||||| |||||||| ||||| |||||||||||       | ||||||||| ||||||||||||||    
T  21617324 gacaaccataatttgtaaagaaagaataggtatttgcacgaaaatcaaaacaatagagagataaagtaaaaaa-taatgtgagtatgagagagaaagttg 21617226  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    | |||||||||||||| |||||||| ||||| |||||||||||    
T  21617225 taacaaaaattgtcacaaaatggatgttcaaatatcatttctc 21617183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 230
Target Start/End: Complemental strand, 30080025 - 30079844
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| |||| || || || | ||||||||||||||||  ||||||||   |||||| |||||||||  | ||||||| |||||    
T  30080025 agtgttatttgaacaaccaatttggt-gaaaacttatttgacaaccataatttacaaagaaaaaagtggtattggcacggaaactatagcaatagagaga 30079927  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||       | ||||||||| |||||||||||||||  ||||| |||||||||||||||| ||||| |||||||||||||    
T  30079926 taaagtaaaaaa-taatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctcta 30079844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 229
Target Start/End: Original strand, 41486030 - 41486215
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| |||| |||| ||||| || | ||||||||||| ||||  ||||||||   |||||| ||||||||| || |||||||     
T  41486030 agaggagtgttatttgaacaaccaatttggt-gacaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatag 41486128  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||||       | ||||||||| |||||||||||||||  ||||| || ||||||||||||| ||||| ||||||||||||    
T  41486129 agagataaagtaaaaag-taatgtgagtatgagagagaaagttgttgcaaaagttatcactaaatggatgttcaaatatcatttctct 41486215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 42667385 - 42667280
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||| |||||||||| |||||||||| || || |||||||||||||||| ||||||||| | |||||| |||||||| |||| ||||| |||||    
T  42667385 agtgttatttaaacaatcaatttggttgacaacttatgcgacaaccataatttataaagaaaaagtaagtatttacacggaaaccaaaacaatagagaga 42667286  T
Q  147 taaagt 152  Q
    ||||||    
T  42667285 taaagt 42667280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 41 - 199
Target Start/End: Original strand, 38338808 - 38338964
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| ||| ||||| ||||||||| | ||||||| ||||| ||  ||||||||||||||| ||||||||  ||||||||||||  ||||||||||||||    
T  38338808 aagaggagtattattcgaacaatcatt-tggttgataatttttggaacaaccataatttataaagaaaaaataggtatttgcacaaaaatcaaagcaata 38338906  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtc 199  Q
     |||||||||||       | ||||||||| |||||||||||||||||||||| |||||    
T  38338907 gagagataaagt-aaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtc 38338964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 229
Target Start/End: Original strand, 5932044 - 5932229
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| |||| |||| ||||| || | ||||||||||| ||||  |||||||| | |||||| ||||||||| || |||||||    
T  5932044 aagaggagtgttatttgaacaaccaatttggt-gacaacttatttgacaaccatattttacaaagaaaaaaatggtattggcacggaaaccatagcaata 5932142  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
     | ||||||||        | ||||||||| |||||||||||||||  ||||| |||||||||||||||| || || ||||||||||||    
T  5932143 gaaagataaag--aaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgtttaaatatcatttctct 5932229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 56271546 - 56271437
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||||||||||||||||||| || || || ||||||| || | ||||||||||||||||  ||||||||| ||||||||||||| ||| |||||||||    
T  56271546 aaagagaagtgttatttgaaca-tccatttgtttgacaacttttatgacaaccataatttacaaagaaaaagtaggtatttgcacgaaaaccaaagcaat 56271448  T
Q  140 aaagagataaa 150  Q
    | |||||||||    
T  56271447 agagagataaa 56271437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 86 - 229
Target Start/End: Complemental strand, 13086163 - 13086021
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    |||||||||||||||  |||||||||  |||||||||||| |||||||||||||| ||||||||| |       | ||||||||| ||||||||||||||    
T  13086163 gacaaccataatttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaaat-aaaaagtaatgtgagtatgagagagaaagttg 13086065  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    | |||||| ||||||| ||||| ||  |||| ||||||||||||    
T  13086064 ttacaaaagttgtcacaaaatgaatgatcaaatatcatttctct 13086021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 233
Target Start/End: Original strand, 9118744 - 9118940
Alignment:
Q  35 aaagtaaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaa 134  Q
    |||| |||||| |||||||||||||||| |||| |||| ||||| || | ||||||||||| ||||  |||||||| | |||||| ||||| |||||| |    
T  9118744 aaagaaaagaggagtgttatttgaacaaccaatttggt-gacaacttatttgacaaccatattttacaaagaaaaaaatggtattggcacgaaaatcata 9118842  T
Q  135 gcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaag 233  Q
    |||||| |||||||||||       | |||||| || |||||||||| ||||  ||||| |||||| ||||||||| ||||| ||| ||||||| ||||    
T  9118843 gcaatagagagataaagt-aaaaaataatgtgattatgagagagaaaattgttgcaaaagttgtcattaaatggatgttcaaatataatttctcaaaag 9118940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 18882859 - 18883046
Alignment:
Q  39 taaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaa 138  Q
    |||||||||||||||||||||||| || | |||||||||| || ||  | || |||||||||  ||||||||  ||||||||| ||| ||||||||||||    
T  18882859 taaagagaagtgttatttgaacaaccatt-tggttgacaacttttggaaaaatcataatttacaaagaaaaaataggtatttgtacgaaaatcaaagcaa 18882957  T
Q  139 taaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    || |||||||||||        | |||||||| |||||||||||||||||||||| ||||  | |||| ||| |||||  ||||||||||    
T  18882958 tagagagataaagtaaaaagtat-tgtgagtatgagagagaaagttgtcacaaaagttgtagcaaaatagatgttcaaaaatcatttctc 18883046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 229
Target Start/End: Original strand, 37514060 - 37514204
Alignment:
Q  85 tgacaaccataa-tttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagt 183  Q
    |||||||||||| ||||  ||||||||| |||| || ||||| |||||||||||||| |||||||||||       | ||||||||| ||||||||||||    
T  37514060 tgacaaccataaatttacaaagaaaaagtaggttttggcacgaaaatcaaagcaatagagagataaagtaaaaacat-atgtgagtatgagagagaaagt 37514158  T
Q  184 tgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||| |||| || |||||||| | ||| ||||||||||||    
T  37514159 tgtcacaaaagttgttacaaaatggatgtacaaatatcatttctct 37514204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 229
Target Start/End: Complemental strand, 40609799 - 40609609
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataattt------atcaagaaaaagaaggtatttgcacggaaatcaaag 135  Q
    |||| |||||||||||||||| |||| |||||||||| || |||||||||||||||||      || ||||||||  | |||||||||| |||| ||||     
T  40609799 agaggagtgttatttgaacaaccaatttggttgacaacttttgtgacaaccataattttaatttataaagaaaaaatatgtatttgcacagaaaccaaaa 40609700  T
Q  136 caataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||| |||||||| ||       | ||||||||| |||||||||||||||||||||| || ||| ||||||||| ||||| ||| ||||||||    
T  40609699 caatagagagataa-gtaaaaa--taatgtgagtatgagagagaaagttgtcacaaaagttatcattaaatggatgttcaaatatgatttctct 40609609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 40 - 232
Target Start/End: Original strand, 624196 - 624387
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaa-gaaaaagaaggtatttgcacggaaatcaaagcaa 138  Q
    |||||||||||||||||||||||  ||| |||| ||||| || | ||||||||||| |||  ||| ||||||   |||||| ||||| ||| || |||||    
T  624196 aaagagaagtgttatttgaacaactaatttggt-gacaacttatttgacaaccatatttttacaaagaaaaaagtggtattggcacgaaaaccatagcaa 624294  T
Q  139 taaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    || |||||||||||       | ||||||||| |||||||||||||||  ||||| |||||||||||| ||| ||||| |||||||||||||||    
T  624295 tagagagataaagtaaaaag-taatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatagatgttcaaatatcatttctctaaa 624387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 230
Target Start/End: Original strand, 28458307 - 28458451
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    ||||| |||||||||  ||||||||| |||||||  |||| |||||||||||||| |||||||||||       | ||||||||| ||||||||||||||    
T  28458307 gacaatcataatttacaaagaaaaagtaggtattgacacgaaaatcaaagcaatagagagataaagtaaaaaa-taatgtgagtatgagagagaaagttg 28458405  T
Q  186 tcacaaaaattgtc-actaaatggatcttcaagtatcatttctcta 230  Q
    |||||||| ||||| |  |||||||| ||||| |||||||||||||    
T  28458406 tcacaaaagttgtcaaaaaaatggattttcaaatatcatttctcta 28458451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 49 - 229
Target Start/End: Complemental strand, 32696358 - 32696180
Alignment:
Q  49 tgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagata 148  Q
    |||||||||||||| |||| |||| ||||| ||  | |||||||||||||||  ||||||||| || |||| ||||| ||||||||||||||||||||||    
T  32696358 tgttatttgaacaaccaat-tggtggacaacttaagggacaaccataatttacaaagaaaaagtagatattggcacgaaaatcaaagcaataaagagata 32696260  T
Q  149 aagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||         |||||| || ||||||||||||| |||||| | ||||||  |||| ||| ||||| ||||||||||||    
T  32696259 aagtaaaaaac-aatgtgaatatgagagagaaagttatcacaatagttgtcaaaaaattgatgttcaaatatcatttctct 32696180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 39312507 - 39312609
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||| | | || || |||||| ||| ||| ||||||||||||||| ||||||||  ||||||||||||| ||| ||||||||||||||||    
T  39312507 agtgttatttgaaccacctatttgcttgacattttatgtaacaaccataatttataaagaaaaaataggtatttgcacgaaaaccaaagcaataaagaga 39312606  T
Q  147 taa 149  Q
    |||    
T  39312607 taa 39312609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 228
Target Start/End: Original strand, 1815887 - 1816071
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| || |||||||||||| || ||||||| ||||||||||  |||||||||  | |||||||||  |||||||| |||||    
T  1815887 aagaggagtgttatttgaacaacca-tctggttgacaacttatgtgacagccataatttacaaagaaaaagtggatatttgcacaaaaatcaaaacaata 1815985  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
     |||||| ||||       | |||||| || || ||| ||| ||||||||||||||||||| |||| ||| ||||| |||||||||||    
T  1815986 gagagat-aagt-gaaaaataatgtgaatatgaaagataaaattgtcacaaaaattgtcacaaaatagatgttcaaatatcatttctc 1816071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 193
Target Start/End: Complemental strand, 31657834 - 31657681
Alignment:
Q  38 gtaaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagca 137  Q
    |||||||| |||||||||| ||||| || | ||||||||||||| || ||||||||| |||||   ||||||||  ||||||| |||| ||| |||||||    
T  31657834 gtaaagaggagtgttatttaaacaaccatt-tggttgacaatttttgggacaaccatcatttacatagaaaaagttggtatttacacgaaaaccaaagca 31657736  T
Q  138 ataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    ||| |||||||||||       | ||||||||| ||||||||||||||||||||||    
T  31657735 atagagagataaagt-aaaaagtaatgtgagtatgagagagaaagttgtcacaaaa 31657681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 6141670 - 6141850
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| | || ||| |||| | ||||||  ||| ||||  ||||||||   |||||| |||||||||||| |||||||||||||    
T  6141670 agtgttatttgaacaaccaatttagt-gactatttatttgacaattatattttacaaagaaaaaagtggtattggcacggaaatcatagcaataaagaga 6141768  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||       | ||||||||| |||||||||||||||  ||||| |||||| |||||| || ||||| ||||||||||||    
T  6141769 taaagtaaagag-taatgtgagtatgagagagaaagttgttgcaaaagttgtcaataaatgaatattcaaatatcatttctct 6141850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 228
Target Start/End: Complemental strand, 13139326 - 13139148
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | ||||||| ||||| || |||||| ||||||||  |||||||||  |||||||||||| ||| ||||  |||| |||||    
T  13139326 agtgttatttgaacaaccatt-tggttgataatttttg-gacaactataatttacaaagaaaaagttggtatttgcacgaaaaccaaaaaaatagagaga 13139229  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||| |       | ||||||||| ||||||||||||||||| ||||||| |||  |||||||| ||||| |||||||||||    
T  13139228 taaa-ttaaaaggtaatgtgagtatgagagagaaagttgtcataaaaattatcataaaatggatgttcaaatatcatttctc 13139148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 85 - 230
Target Start/End: Original strand, 36111324 - 36111469
Alignment:
Q  85 tgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagtt 184  Q
    ||||||||||| ||||  ||||||||   |||||| ||||||||| || ||||||| |||||||||||       | ||||||||| |||||| ||||||    
T  36111324 tgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagataaagtaaaaaagtaatgtgagtatgagagataaagtt 36111423  T
Q  185 gtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||  ||||| |||| ||||||||||| ||||| |||||||||||||    
T  36111424 gttgcaaaagttgttactaaatggatgttcaaatatcatttctcta 36111469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 43769890 - 43769746
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| | || | ||||| || || || |||||||||||||||  |||||||||  |||||||||||| |||| ||| |||||||||||    
T  43769890 agtgttatttgaacaa-ctattttgttgataacttatgcgacaaccataatttacaaagaaaaagtgggtatttgcacgaaaattaaaacaataaagaga 43769792  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    ||||||       | ||||||||| ||||||||||||||||||||||    
T  43769791 taaagt-aaaaaataatgtgagtatgagagagaaagttgtcacaaaa 43769746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 230
Target Start/End: Complemental strand, 31076238 - 31076052
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||| ||||| |||| |||| ||||| || | ||||||||||||||||  ||||||||| || ||||  |||||||| || || ||||    
T  31076238 aagagtagtgttatttaaacaaccaatttggt-gacaacttatttgacaaccataatttacaaagaaaaagtag-tattgacacggaaaccatagtaata 31076141  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
     |||||||||||       | ||||||||| |||||||||||||||| || || |||| || |||||||| ||||| |||||||||||||    
T  31076140 gagagataaagtaaaaaa-tgatgtgagtatgagagagaaagttgtcccagaagttgttaccaaatggatgttcaaatatcatttctcta 31076052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 229
Target Start/End: Complemental strand, 2999253 - 2999111
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    |||||||||||||||  |||||||||  |||||||||| | ||| |||||||||| |||||||||||       | |||||| || || ||| || ||||    
T  2999253 gacaaccataatttacaaagaaaaagttggtatttgcatgaaaaccaaagcaatagagagataaagt-aaaaaataatgtgaatatgaaagataatgttg 2999155  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||||||||  |||||||| ||||| ||||||||||||    
T  2999154 tcacaaaaattgtcataaaatggatgttcaaatatcatttctct 2999111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 4915680 - 4915745
Alignment:
Q  164 gtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||||||    
T  4915680 gtgagtatgagagagaaagttgtcataaaaattgtcacaaaatggatgttcaaatatcatttctct 4915745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 46 - 189
Target Start/End: Complemental strand, 4949686 - 4949545
Alignment:
Q  46 aagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagag 145  Q
    |||||||||||||||||  ||| | |||||||| || || |||||| ||||||||  ||||||||| | ||||||| ||||||| |||| |||||| |||    
T  4949686 aagtgttatttgaacaactaatttagttgacaacttatgcgacaactataatttacaaagaaaaagtaagtatttgtacggaaaccaaaacaataatgag 4949587  T
Q  146 ataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcac 189  Q
    |||||||       | ||||||||| ||||||||||||||||||    
T  4949586 ataaagt--aaaaatgatgtgagtatgagagagaaagttgtcac 4949545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 229
Target Start/End: Complemental strand, 42815583 - 42815403
Alignment:
Q  48 gtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataa-tttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||| || | || | ||||| || | |||||||||||| ||||  ||| ||||| |||| |||||||| |||||||||||||| |||||    
T  42815583 gtgttatttgaacaaccatt-tgatagacaacttatttgacaaccataaatttacaaaggaaaagtaggtttttgcacgaaaatcaaagcaatagagaga 42815485  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||        |||||||||| |||||||||||||||||||||| |||| || |||| | | | ||| ||||||||||||    
T  42815484 taaagtaaaaaca-tatgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatagttgtacaaatatcatttctct 42815403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 193
Target Start/End: Complemental strand, 12139039 - 12138887
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| | |||||||||||||| || | || |||| || || ||| ||||||||||||||  ||||||||| ||||||||||||  ||||||||| |||    
T  12139039 aaagaggaatgttatttgaacaaccatt-tgattgataacttatgtaacaaccataatttacaaagaaaaagtaggtatttgcacaaaaatcaaagtaat 12138941  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    | |||||||||||       | |||||||||  |||||||| ||||||||||||    
T  12138940 agagagataaagtaaaaaaataatgtgagtagaagagagaacgttgtcacaaaa 12138887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 228
Target Start/End: Original strand, 13389342 - 13389523
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaag--gtatttgcacggaaatcaaagcaataaaga 144  Q
    ||||||||||||||||||||| ||| | |||| || | ||||||||||||||||| ||||||||  ||   ||||   |||||||||| ||||||| |||    
T  13389342 agtgttatttgaacaatcaatttgg-tcacaacttatttgacaaccataatttataaagaaaaaatagtattattgatacggaaatcatagcaatagaga 13389440  T
Q  145 gataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||       | ||||| |||  ||||||||||||||| |||||||||||||  ||||| | ||||| |||||||||||    
T  13389441 gataaagtaaaaatataatgtgtgtataagagagaaagttgtcgcaaaaattgtcac-caatggttgttcaaatatcatttctc 13389523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 228
Target Start/End: Complemental strand, 14451572 - 14451393
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| |||| ||||| || | ||||||||||| ||||  ||||||||   ||||||  |||| ||| || | ||||| |||||    
T  14451572 agtgttatttgaacaaccaatttggt-gacaacttatttgacaaccatattttacaaagaaaaaagtggtattgacacgaaaaccataacaatagagaga 14451474  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||       | ||||||||| |||||||||||||||  | ||| |||||||||||||||| ||||| |||||||||||    
T  14451473 taaagtaaaaac-taatgtgagtatgagagagaaagttgttgctaaagttgtcactaaatggatgttcaaatatcatttctc 14451393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 228
Target Start/End: Original strand, 439145 - 439331
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||||||||||||||||||||  ||| ||| ||| ||||| | ||||||||||| ||||  ||||||||   |||||||| | |||||||| ||||||    
T  439145 aaagagaagtgttatttgaacaactaatttgg-tgataatttatttgacaaccatattttacaaagaaaaaagtggtatttgtatggaaatcatagcaat 439243  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |  || |||||||       | ||||||||| |||||||||| ||||  | |||||||||| ||||||||| ||||| ||| |||||||    
T  439244 agggaaataaagt-aaaaactaatgtgagtatgagagagaaaattgttgcgaaaattgtcattaaatggatgttcaaatattatttctc 439331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 38 - 229
Target Start/End: Original strand, 2256214 - 2256402
Alignment:
Q  38 gtaaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagca 137  Q
    |||||||| ||||||||||||||||  ||| |||| ||||| || | | |||| |||||||||  || |||||| || ||||   |||||||||| ||||    
T  2256214 gtaaagaggagtgttatttgaacaactaatttggt-gacaacttattttacaatcataatttacaaacaaaaagtag-tattgaaacggaaatcatagca 2256311  T
Q  138 ataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||| |||||||||||       |||| |||||| || ||||||||||||||||||| ||||||  |||| ||| ||||| ||||||||||||    
T  2256312 atagagagataaagtaaaaaa-ttatatgagtatgatagagaaagttgtcacaaaagttgtcatcaaatagatgttcaattatcatttctct 2256402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 2401676 - 2401611
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
    ||||||||| |||||| ||||||||||||||| ||||||| |||||||| ||||| ||||||||||    
T  2401676 atgtgagtatgagagataaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttct 2401611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 42 - 229
Target Start/End: Original strand, 14010005 - 14010190
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| ||||||||||||| ||| | | |||||||||| || || |||||||||||||||| ||||||||   |||||||||||| ||| ||||  ||||     
T  14010005 agaggagtgttatttgaataattatt-tggttgacaacttttgggacaaccataatttataaagaaaaaattggtatttgcacgaaaaccaaaataatag 14010103  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||||       | || |||||| |||||| |||||| |   |||| ||||||| |||||||| ||||| ||||||||||||    
T  14010104 agagataaagt-aaaaagtaatatgagtatgagagaaaaagttattgtaaaagttgtcacaaaatggatgttcaaatatcatttctct 14010190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 229
Target Start/End: Complemental strand, 21025780 - 21025600
Alignment:
Q  48 gtgttatttgaacaatcaatctggttgacaatttgtgtgacaacca-taatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||||||| ||  |||||| || ||||||||||| |||||||  ||||||| | || || ||  ||||||| |||||||||| |||||    
T  21025780 gtgttatttgaacaatcaat-tgagtgacaacttttgtgacaaccactaatttacaaagaaaa-gtagatagttatacggaaaccaaagcaatagagaga 21025683  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
     |||||       | ||||||||| |||||| |||||||||||| |||||||||| |||||| | |  || ||||||||||||    
T  21025682 gaaagtaaaaaaataatgtgagtaagagagataaagttgtcacataaattgtcacaaaatggttgtcaaaatatcatttctct 21025600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 38519894 - 38519796
Alignment:
Q  127 aaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcattt 225  Q
    |||||||||||||| ||||| |||||       | ||||||||| |||||||||||||||||||||||||||||  |||||| | ||||| ||||||||    
T  38519894 aaatcaaagcaatagagagagaaagtagaataatcatgtgagtatgagagagaaagttgtcacaaaaattgtcaaaaaatggttgttcaaatatcattt 38519796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 229
Target Start/End: Complemental strand, 51255847 - 51255745
Alignment:
Q  127 aaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttc 226  Q
    |||||||||||||| ||||| |||||       | ||||||||| |||||||||||||||||||||| ||||||  |||||| | ||||| |||||||||    
T  51255847 aaatcaaagcaatagagagagaaagtagaataatcatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 51255748  T
Q  227 tct 229  Q
    |||    
T  51255747 tct 51255745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 228
Target Start/End: Original strand, 32546288 - 32546428
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    ||||| |||||||| | |||||| |  ||||||||||||  |||||||||||||| | |||||||||       | ||||||||| |||||| |||||||    
T  32546288 gacaatcataatttgtaaagaaagaataggtatttgcacaaaaatcaaagcaatagaaagataaagtaaaaa--taatgtgagtatgagagaaaaagttg 32546385  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    | |||||||||||||| ||||  || ||||| |||||||||||    
T  32546386 taacaaaaattgtcacaaaataaatgttcaaatatcatttctc 32546428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 33899214 - 33899321
Alignment:
Q  43 gagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaa 142  Q
    |||||||||||||||||||| |||| |||| ||||| || | ||||||||||| ||||  |||||||| | |||||| ||||||||| || | ||||| |    
T  33899214 gagaagtgttatttgaacaaccaatttggt-gacaacttatttgacaaccatattttacaaagaaaaaaatggtattggcacggaaaccataacaataga 33899312  T
Q  143 gagataaag 151  Q
    |||||||||    
T  33899313 gagataaag 33899321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 228
Target Start/End: Complemental strand, 51887804 - 51887663
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    ||||||||||||||   |||||| |  | ||||||||||| |||||||| ||||| |||||||||||       | || |||||| ||||||||||||||    
T  51887804 gacaaccataatttgcaaagaaagaatatgtatttgcacgaaaatcaaaacaatagagagataaagtaaaaaa-taatttgagtatgagagagaaagttg 51887706  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |  ||||| ||||||| |||||||| ||||| |||||||||||    
T  51887705 tagcaaaagttgtcacaaaatggatgttcaaatatcatttctc 51887663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 225
Target Start/End: Complemental strand, 12112811 - 12112633
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||| ||||||||||| |||| |||| ||||| || | ||||||||||| ||||  ||||||||   ||||||  ||||||||||| |||||||     
T  12112811 agaggagtgatatttgaacaaccaatttggt-gacaacttatttgacaaccatactttacaaagaaaaaagtggtattgacacggaaatcatagcaatag 12112713  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcattt 225  Q
    |||||||||||       | || ||| || ||||||||||||||   ||||| |||||||||||||||| ||||| ||||||||    
T  12112712 agagataaagt-aaaaaataatatgaatatgagagagaaagttg---caaaagttgtcactaaatggatgttcaaatatcattt 12112633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 229
Target Start/End: Complemental strand, 42959456 - 42959270
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| |||| | || || || || | |||||| |||| ||||  ||||||||   ||||||  |||||||| || |||||||     
T  42959456 agaggagtgttatttgaacaaccaatttagt-gataacttatttgacaatcatattttacaaagaaaaaagtggtattgacacggaaaccatagcaatag 42959358  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||||       | |||||||||  ||||| ||||||||  ||||| ||| |||||||||||| ||||| ||||||||||||    
T  42959357 agagataaagtaaaaaaataatgtgagtataagagataaagttgttgcaaaagttgccactaaatggatgttcaaatatcatttctct 42959270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 49768248 - 49768314
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagt 152  Q
    |||||||||||||| | |||||| |  ||||||||||||| |||||||||||||| |||||||||||    
T  49768248 gacaaccataatttgtaaagaaataataggtatttgcacgaaaatcaaagcaatagagagataaagt 49768314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 229
Target Start/End: Original strand, 54669470 - 54669655
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| |||| | | |||||| || | ||||||||||||||||  ||||||||| | |||||  |||||||| |  |||||||    
T  54669470 aagaggagtgttatttgaacaaccaat-ttgatgacaacttatttgacaaccataatttacaaagaaaaagta-gtattgacacggaaaccgtagcaata 54669567  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
     |||||||||||       | |||| |||| || ||| |||||||||| |||| ||||||| |||||||| || || ||||||||||||    
T  54669568 gagagataaagt-gaaaaataatgtaagtatgaaagataaagttgtcataaaagttgtcaccaaatggatgttgaaatatcatttctct 54669655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 228
Target Start/End: Original strand, 3078803 - 3078979
Alignment:
Q  51 ttatttgaacaatcaatctggttgacaatttgtgtgacaaccataa-tttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataa 149  Q
    ||||||||||||||| | || | ||||| || | |||||||||||| ||||  ||| ||||| |||| || ||||| |||||||||||||| |||||||     
T  3078803 ttatttgaacaatcatt-tgatagacaacttatttgacaaccataaatttacaaaggaaaagtaggttttggcacgaaaatcaaagcaatagagagatag 3078901  T
Q  150 agtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||       | ||||||||| |||||||||||||||||||||| |||| || |||||  | | ||| |||||||||||    
T  3078902 agtaaaaacat-atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatgattgtacaaatatcatttctc 3078979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 6494908 - 6494965
Alignment:
Q  172 gagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||||||||||||| |||| |||| |||||||| ||||| ||||||||||||    
T  6494908 gagagagaaagttgtcacaataattatcaccaaatggatgttcaaatatcatttctct 6494965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 17476055 - 17475952
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||||||| ||| |||||| || | |||||| |||||||||  ||||||||| | |||||  |||||||| || ||||||| |||||    
T  17476055 agtgttatttgaacaatcaatttgg-tgacaacttatttgacaatcataatttacaaagaaaaagta-gtattgacacggaaaccatagcaatagagaga 17475958  T
Q  147 taaagt 152  Q
    ||||||    
T  17475957 taaagt 17475952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 17683527 - 17683443
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacg 125  Q
    |||||| |||||||||||||||| || | |||||||||| || || |||||||||||||||  |||||||||  ||||||||||||    
T  17683527 aaagaggagtgttatttgaacaaccatt-tggttgacaacttttgggacaaccataatttacaaagaaaaagttggtatttgcacg 17683443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 45851868 - 45851758
Alignment:
Q  119 ttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagt 218  Q
    ||||||| ||||||||| ||||||||||||||||       | ||||||||| || ||| |||||||| |||||||||||||  |||| ||| ||||| |    
T  45851868 ttgcacgaaaatcaaagtaataaagagataaagtaaaaaa-tgatgtgagtatgaaagaaaaagttgtaacaaaaattgtcataaaattgatgttcaaat 45851770  T
Q  219 atcatttctcta 230  Q
    ||||||||||||    
T  45851769 atcatttctcta 45851758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 228
Target Start/End: Complemental strand, 47099199 - 47099022
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | ||||||| || || || |||||||||||||||  |||||||     |||||||||||  || |||||||||| |||||    
T  47099199 agtgttatttgaacaaccatt-tggttgataacttttgggacaaccataatttacaaagaaaatattagtatttgcacg--aaccaaagcaatagagaga 47099103  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||       | ||||||||| | |||||||||||||  ||||| ||||||| ||||| || ||||| |||||||||||    
T  47099102 taaagtaaaaag-taatgtgagtatgtgagagaaagttgttgcaaaagttgtcacaaaatgaatattcaaatatcatttctc 47099022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 227
Target Start/End: Complemental strand, 51194454 - 51194270
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| |||| || | ||||| || | ||||||||||| ||||  ||||||||   |||||| ||||| ||| || | |||||    
T  51194454 aagaggagtgttatttgaacaaccaatttgat-gacaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacgaaaaccataacaata 51194356  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
     |||||||||||       | ||||||||| || ||||||||||||   |||| |||||||||||||||| ||||| ||| ||||||    
T  51194355 gagagataaagtaaaaag-tgatgtgagtatgaaagagaaagttgttgtaaaagttgtcactaaatggatgttcaaatattatttct 51194270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 17475388 - 17475321
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| ||||||||||||||||| |||| || |||| ||||| || ||||| ||||||||||||    
T  17475388 atgtgagtatgagagagaaagttgtcaaaaaagttatcaccaaatgaatgttcaaatatcatttctct 17475321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 39158171 - 39158104
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| ||||||||||||||||||||||||| |||  |||||  | ||||| ||||||||||||    
T  39158171 atgtgagtatgagagagaaagttgtcacaaaaattatcaaaaaatgattgttcaaatatcatttctct 39158104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 47288144 - 47288081
Alignment:
Q  166 gagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||| ||||||||||||||||||||||||||| || |||||| | | ||| ||||||||||||    
T  47288144 gagtatgagagagaaagttgtcacaaaaattgttacaaaatggttgtacaaatatcatttctct 47288081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 51225530 - 51225597
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||  |||||||||||||||| ||||||| |||| |||| ||| ||||| ||||||||||||    
T  51225530 atgtgagtattagagagaaagttgtcataaaaattatcacaaaatagatgttcaaatatcatttctct 51225597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 230
Target Start/End: Original strand, 53654635 - 53654823
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| ||||||||||||| || |||| || |||| ||||| || |||||||||||||||  |||||| || ||||| ||||||  |||  || | |||     
T  53654635 aagaggagtgttatttgaataaccaatttgattgataatttatgggacaaccataatttacaaagaaatagtaggtagttgcacaaaaactaacgtaatg 53654734  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
     |||||||||||       | || ||| || || |||||||||||||||||||||| |||  |||| ||| ||||| |||||||||||||    
T  53654735 gagagataaagt-aaaaaataatatgaatatgaaagagaaagttgtcacaaaaattatcataaaatagatgttcaaatatcatttctcta 53654823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 5932769 - 5932835
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||||||||||||||| ||||||  || ||| | ||||| |||||||||||    
T  5932769 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttctc 5932835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 7627914 - 7627848
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||| || ||||||||||| ||| |||||| || ||||| |||||||||||    
T  7627914 atgtgagtatgagagagaaaattatcacaaaaattatcattaaatgaatattcaaatatcatttctc 7627848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 14593894 - 14593828
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| || | |||||||||| |||||| ||||||| |||||||| ||||| |||||||||||    
T  14593894 atgtgagtatgaaatagaaagttgtaacaaaagttgtcacaaaatggatattcaaatatcatttctc 14593828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 26206982 - 26207048
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||| || |||||||||| ||||  |||||||| ||||||||||||| ||||| |||||||||||    
T  26206982 atgtgaatatgagagagaaaattgttgcaaaaattatcactaaatggatgttcaaatatcatttctc 26207048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 30170025 - 30170091
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||||||||||||||| ||||||  |||| ||| ||||| ||| |||||||    
T  30170025 atgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatagatgttcaaatataatttctc 30170091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 37066171 - 37066063
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| |||| |||| ||||| || | |||||| || ||||||  ||||||||| || |||| |||||||||||| ||||||      
T  37066171 agaggagtgttatttgaacaaccaatttggt-gacaacttatttgacaatcaaaatttactaagaaaaagtag-tattggcacggaaatcatagcaatgg 37066074  T
Q  142 agagataaagt 152  Q
    |||||||||||    
T  37066073 agagataaagt 37066063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 49896596 - 49896662
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagt 152  Q
    |||||||||||||||  |||||||||  ||||||  |||| |||||||||||||| |||||||||||    
T  49896596 gacaaccataatttacaaagaaaaagttggtattgacacgaaaatcaaagcaatagagagataaagt 49896662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 2268513 - 2268577
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
    ||||||||| |||||||||||||||||||||| |||| |  |||||||| ||||| ||||||||||    
T  2268513 atgtgagtatgagagagaaagttgtcacaaaagttgtta-aaaatggatgttcaaatatcatttct 2268577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 150
Target Start/End: Complemental strand, 12799891 - 12799791
Alignment:
Q  49 tgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagata 148  Q
    |||||||||||||| || | ||||| |||| || |||||||| |||||||||  ||||||||  |||||||| |||| ||||||||||| || ||| |||    
T  12799891 tgttatttgaacaaccatt-tggttaacaacttatgtgacaatcataatttacaaagaaaaaataggtatttacacgaaaatcaaagcattagagaaata 12799793  T
Q  149 aa 150  Q
    ||    
T  12799792 aa 12799791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 229
Target Start/End: Original strand, 23369307 - 23369404
Alignment:
Q  131 caaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||| |||||||||||       | ||||||||| |||||||||||||||||||||| |||| |  |||||| | ||||| ||||||||||||    
T  23369307 caaagcaatagagagataaagtaaaaagataatgtgagtaagagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttctct 23369404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 26718547 - 26718443
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||| || || | ||||||| ||||| || ||||| |||||||||  |||||||||  |||||||||||  ||| ||||| |||| |||||    
T  26718547 agtgttatttgaataaccatt-tggttgataatttttgggacaatcataatttacaaagaaaaagttggtatttgcacaaaaaacaaagtaatagagaga 26718449  T
Q  147 taaagt 152  Q
    ||||||    
T  26718448 taaagt 26718443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 26731175 - 26731071
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||| || || | ||||||| ||||| || ||||| |||||||||  |||||||||  |||||||||||  ||| ||||| |||| |||||    
T  26731175 agtgttatttgaataaccatt-tggttgataatttttgggacaatcataatttacaaagaaaaagttggtatttgcacaaaaaacaaagtaatagagaga 26731077  T
Q  147 taaagt 152  Q
    ||||||    
T  26731076 taaagt 26731071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 41082384 - 41082315
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    ||||||||| ||||||||||||||||| |||| || |||| ||||  || ||||| ||||||||||||||    
T  41082384 atgtgagtatgagagagaaagttgtcataaaagttatcaccaaataaatgttcaaatatcatttctctaa 41082315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 134
Target Start/End: Original strand, 45143567 - 45143651
Alignment:
Q  49 tgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaa 134  Q
    |||||||||||||| | || |||||||||| || || |||||||||||||||  |||||||||  |||||||||||| ||| ||||    
T  45143567 tgttatttgaacaa-ctatttggttgacaacttttgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaaccaaa 45143651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 134
Target Start/End: Original strand, 45152336 - 45152420
Alignment:
Q  49 tgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaa 134  Q
    |||||||||||||| | || |||||||||| || || |||||||||||||||  |||||||||  |||||||||||| ||| ||||    
T  45152336 tgttatttgaacaa-ctatttggttgacaacttttgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaaccaaa 45152420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 228
Target Start/End: Original strand, 50272969 - 50273138
Alignment:
Q  51 ttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaa 150  Q
    |||||||||||| |||| |||| ||||| || | ||||||||||| ||||  ||||||||   |||||| ||||||||| || ||||||| ||||| |||    
T  50272969 ttatttgaacaaccaatttggt-gacaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagagacaaa 50273067  T
Q  151 gtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
             | ||||| ||| | |||||||||||||  ||||| |||||| ||||||||| ||||| |||||||||||    
T  50273068 -------aataatgtgggtatgtgagagaaagttgttgcaaaagttgtcattaaatggatgttcaaatatcatttctc 50273138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 229
Target Start/End: Original strand, 51573562 - 51573704
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    |||| |||||||||   ||||||||  ||||||||| ||| |||||||||||||| |||||||||||       | ||||||||| || |||||||||      
T  51573562 gacagccataatttgcaaagaaaaaataggtatttgtacgaaaatcaaagcaatagagagataaagt-aaaaaataatgtgagtatgaaagagaaagtaa 51573660  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |   ||| |||||||| |||||||| ||||| ||||||||||||    
T  51573661 tagaaaagattgtcacaaaatggatgttcaaatatcatttctct 51573704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 44257735 - 44257771
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| |||||||||||||||||||||||||||    
T  44257735 atgtgagtatgagagagaaagttgtcacaaaaattgt 44257771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 232
Target Start/End: Complemental strand, 51852236 - 51852072
Alignment:
Q  66 atctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgt 165  Q
    |||||||||| ||||| || || ||||||||| ||  ||||||| | || |||||||||  ||| |||| ||||| |||||||||||       | ||||    
T  51852236 atctggttgaaaatttatgggataaccataatctacaaagaaaatgtag-tatttgcacaaaaaccaaaacaatagagagataaagtaaaaaa-taatgt 51852139  T
Q  166 gagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    || || | |||| |||||||||||||||||| |||| ||||  || ||||| |||||||||||||||    
T  51852138 gaatatgggagaaaaagttgtcacaaaaattctcacaaaataaatgttcaaatatcatttctctaaa 51852072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 193
Target Start/End: Original strand, 52846122 - 52846263
Alignment:
Q  48 gtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagat 147  Q
    ||||||||||||||| | || || |||||||||| |  ||||| |||||||||  |||||||||   ||||||||||| ||| |||||||||  ||||||    
T  52846122 gtgttatttgaacaa-ctatttgattgacaatttttaggacaatcataatttacaaagaaaaagtttgtatttgcacgaaaaccaaagcaat--agagat 52846218  T
Q  148 aaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    |||||       | ||||||||| ||||||||||||||||| ||||    
T  52846219 aaagt-aaaaagtaatgtgagtatgagagagaaagttgtcataaaa 52846263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 198
Target Start/End: Complemental strand, 15522460 - 15522384
Alignment:
Q  122 cacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    |||| ||| |||||||||| |||||||||||       ||||||||||| ||||||||||||| |||||||| ||||    
T  15522460 cacgaaaaccaaagcaatatagagataaagtaaaaatattatgtgagtaggagagagaaagttatcacaaaagttgt 15522384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 47240879 - 47240820
Alignment:
Q  166 gagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcattt 225  Q
    ||||| |||||||||||||||  |||||||||||| |||||| || ||||| ||||||||    
T  47240879 gagtatgagagagaaagttgttgcaaaaattgtcaataaatgaatgttcaaatatcattt 47240820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 49768875 - 49768941
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| ||||||||||||||||| |||||||||  | |||||||| | ||| ||||||||||||    
T  49768875 atgtgagtatgagagagaaagttgtca-aaaaattgttgcaaaatggatgtacaaatatcatttctct 49768941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 54000764 - 54000697
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| ||||||||||||||| | |||||||||||  || ||| | ||||| ||||||||||||    
T  54000764 atgtgagtatgagagagaaagttgttataaaaattgtcaaaaagtggttgttcaaatatcatttctct 54000697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 55609171 - 55609237
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| |||||||||||||||||||||| |||| || |||||| | | ||| ||||||||||||    
T  55609171 atgtgagtatgagagagaaagttgtcacaaaagttgt-acaaaatggttgtacaaatatcatttctct 55609237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 56557799 - 56557732
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| |||||||||| ||||||||||| ||||||  |||| | | ||||| ||||||||||||    
T  56557799 atgtgagtatgagagagaaaattgtcacaaaagttgtcataaaattgttgttcaaatatcatttctct 56557732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 196
Target Start/End: Original strand, 149490 - 149524
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaatt 196  Q
    ||||||||| |||||||||||||||||||||||||    
T  149490 atgtgagtatgagagagaaagttgtcacaaaaatt 149524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 336813 - 336851
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtca 200  Q
    |||||| || |||||||||||||||||||||||||||||    
T  336813 atgtgaatatgagagagaaagttgtcacaaaaattgtca 336851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 2738273 - 2738339
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||| || ||||||||||||| |||||||||||||||  |||||  | ||||| |||||||||||    
T  2738273 atgtgaatatgagagagaaagttatcacaaaaattgtcaaaaaatgattgttcaaatatcatttctc 2738339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 32012962 - 32012896
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||| ||| |||||||||||||||||||||| ||||||  || ||| | ||||| |||||||||||    
T  32012962 atgtgtgtatgagagagaaagttgtcacaaaagttgtcaaaaattggttgttcaaatatcatttctc 32012896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 40409172 - 40409241
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    ||||||||| ||||||||||||||||| ||||| |||||| || | ||| | ||| |||||||||||||||    
T  40409172 atgtgagtatgagagagaaagttgtca-aaaaactgtcacaaagtagatgtacaaatatcatttctctaaa 40409241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 192
Target Start/End: Complemental strand, 46173604 - 46173574
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaa 192  Q
    |||||||||||||||||||||||||||||||    
T  46173604 atgtgagtacgagagagaaagttgtcacaaa 46173574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 196
Target Start/End: Complemental strand, 46213035 - 46213001
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaatt 196  Q
    |||||||||||||||| ||||||||||||||||||    
T  46213035 atgtgagtacgagagaaaaagttgtcacaaaaatt 46213001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 50890079 - 50890117
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtca 200  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  50890079 atgtgagtatgagagagaaagttgtcacaaaagttgtca 50890117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 21172335 - 21172278
Alignment:
Q  173 agagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||| |||| | |||||||||||| |||||||| || || |||||||||||||    
T  21172335 agagagaaaattgtaaaaaaaattgtcacaaaatggatatttaaatatcatttctcta 21172278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 24235387 - 24235347
Alignment:
Q  160 ttatgtgagtacgagagagaaagttgtcacaaaaattgtcac 201  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  24235387 ttatgtgagtatgagagagaaagttgt-acaaaaattgtcac 24235347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 25317958 - 25318061
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| |||| || || || | ||||||||||| ||||  ||||||||   ||||||  |||||||| ||| ||||||||||||    
T  25317958 agtgttatttgaacaaccaatttggt-gataacttatttgacaaccatattttacaaagaaaaaagtggtattgacacggaaaccaa-gcaataaagaga 25318055  T
Q  147 taaagt 152  Q
    ||||||    
T  25318056 taaagt 25318061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 27326683 - 27326748
Alignment:
Q  87 acaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagt 152  Q
    |||||||| |||||  |||||||||  |||||||||||| ||| |||||||||| ||| |||||||    
T  27326683 acaaccatcatttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagaaataaagt 27326748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 38864740 - 38864785
Alignment:
Q  161 tatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaat 206  Q
    |||||||||| ||||||||||||||||| |||| ||||||| ||||    
T  38864740 tatgtgagtatgagagagaaagttgtcaaaaaagttgtcacaaaat 38864785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 53152213 - 53152317
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| |||| ||||| || | ||||||||||| ||||  ||||||||   |||||| |||| |||| || | ||||| |||||    
T  53152213 agtgttatttgaacaaccaatttggt-gacaacttatttgacaaccatactttacaaagaaaaaagtggtattggcacagaaaccataacaatatagaga 53152311  T
Q  147 taaagt 152  Q
    ||||||    
T  53152312 taaagt 53152317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 10250521 - 10250557
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  10250521 atgtgagtatgagagagaaagttgtcacaaaagttgt 10250557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 10994158 - 10994225
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||| |||||| |||||||||| ||| |||||||| |||||| | | ||| |||||||||||||    
T  10994158 atgtgagtatgagagataaagttgtca-aaagattgtcacaaaatggttgtacaaatatcatttctcta 10994225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 19720645 - 19720712
Alignment:
Q  160 ttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||||| ||||||||||||| |  ||||| ||||||| |||||||| | ||| |||||||||||    
T  19720645 ttatgtgagtaagagagagaaagttat-tcaaaagttgtcacaaaatggatgtgcaaatatcatttctc 19720712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 29175292 - 29175256
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  29175292 atgtgagtatgagagaaaaagttgtcacaaaaattgt 29175256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 29227248 - 29227316
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||| ||| ||||||||||||| ||||||||||| |||  || ||| | ||||| |||||||||||||    
T  29227248 atgtgtgtatgagagagaaagttatcacaaaaattatcaaaaagtggttgttcaaatatcatttctcta 29227316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 31318818 - 31318751
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||| ||||||||||||||| |||||||||||  | |||||| | | ||| |||||||||||||    
T  31318818 atgtgagtatgagagagaaagttgt-acaaaaattgtaccaaaatggttgtacaaatatcatttctcta 31318751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 50721750 - 50721818
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||| || |||||||||| |||||||| ||||||  || ||| | ||||| |||||||||||||    
T  50721750 atgtgagtatgaaagagaaagttatcacaaaagttgtcaaaaattggttgttcaaatatcatttctcta 50721818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 54909389 - 54909353
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| || ||||||||||||||||||||||||    
T  54909389 atgtgagtatgaaagagaaagttgtcacaaaaattgt 54909353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 56474769 - 56474837
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    |||||||||  ||||||||| |||||||||||||||| |  |||||  | ||||| |||||||||||||    
T  56474769 atgtgagtataagagagaaaattgtcacaaaaattgtaaaaaaatgattgttcaaatatcatttctcta 56474837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 115)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 47 - 228
Target Start/End: Complemental strand, 50433949 - 50433769
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||  ||| || ||||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||| ||||||||||| |||||    
T  50433949 agtgttatttgaacaacgaatttgattgacaacttgtgtgacaaccataatttataaagaaaaagtaggtatttgtacggaagtcaaagcaatagagaga 50433850  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||       |||||||||||  |||||||||||||||| |||| |||| || |||| ||| ||||| |||||||||||    
T  50433849 taaagt-aaaaaattatgtgagtataagagagaaagttgtcataaaagttgtgaccaaatcgatgttcaaatatcatttctc 50433769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 41 - 228
Target Start/End: Original strand, 36577298 - 36577483
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| || | |||||||||| || |  |||||||||||||||| |||||||||  |||||||||||| ||||||||||||||    
T  36577298 aagaggagtgttatttgaacaaccatt-tggttgacaacttttaggacaaccataatttataaagaaaaagttggtatttgcacgaaaatcaaagcaata 36577396  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||||||       | ||||||||| |||||||||||||||  ||||| ||||||| |||||||| ||||| |||||||||||    
T  36577397 aagagataaagt-aaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctc 36577483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 10889938 - 10890118
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| | || |||||||||| || ||||||||||||||||||  |||||||||  ||||| |||||| |||||||||||||| |||||    
T  10889938 agtgttatttgaacaa-ctatttggttgacaacttttgtgacaaccataatttacaaagaaaaagttggtatgtgcacgaaaatcaaagcaatagagaga 10890036  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||       | ||||||||| |||||||||||||||||||||| ||||||  |||||||| ||||| ||||||||||||    
T  10890037 taaagt-aaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 10890118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 52362661 - 52362481
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | |||||||||| || |  |||||||||||||||| |||||||||  |||||||||||| ||| |||||||||| |||||    
T  52362661 agtgttatttgaacaaccatt-tggttgacaacttttaggacaaccataatttataaagaaaaagttggtatttgcacgaaaaccaaagcaatagagaga 52362563  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||       | ||||||||| |||||||||||||||||||||| ||||||  |||||||| ||||| ||||||||||||    
T  52362562 taaagt-aaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 52362481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 47 - 228
Target Start/End: Complemental strand, 13489841 - 13489662
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| | || |||||||||| || || |||||||||||||||  |||||||||  |||||||||||| ||| |||||||||| |||||    
T  13489841 agtgttatttgaacaa-ctatttggttgacaacttctgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatagagaga 13489743  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||       | ||||||||| |||||||||||||||||||||| ||||||  |||||||| ||||| |||||||||||    
T  13489742 taaagt-aaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctc 13489662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 42 - 210
Target Start/End: Original strand, 29147760 - 29147926
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| ||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||  ||| ||||| |  |||||||||||||| |||| |||||     
T  29147760 agaggagtgttatttgaacaatcaatttggttgataatttatgtgacaaccataatttacaaaggaaaagtaaatatttgcacggaaaccaaaacaatag 29147859  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggat 210  Q
    |||||||||||       | | |||||||  ||||||||||||||||||||| ||||||| ||||||||    
T  29147860 agagataaagt--aaaaatgacgtgagtataagagagaaagttgtcacaaaagttgtcaccaaatggat 29147926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 47 - 228
Target Start/End: Complemental strand, 35137023 - 35136844
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||||| | ||||||||||||| |  |||||||||||||||  |||||||||   ||||||||||  |||||||||||||| |||||    
T  35137023 agtgttatttgaacaatcatt-tggttgacaatttttaggacaaccataatttacaaagaaaaagtttgtatttgcacaaaaatcaaagcaatagagaga 35136925  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||       | ||||||||| |||| ||||||||||  ||||| ||||||| |||||||| ||||| |||||||||||    
T  35136924 taaagt-aaaaagtaatgtgagtatgagaaagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctc 35136844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 41 - 232
Target Start/End: Complemental strand, 7128303 - 7128114
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| ||||||||||||||||||||| |||| ||||| || | ||||||||||| ||||  ||||||||   |||||| ||||||||| || |||||||    
T  7128303 aagaggagtgttatttgaacaatcaatttggt-gacaacttatttgacaaccatactttacaaagaaaaaagtggtattggcacggaaaccatagcaata 7128205  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
     |||||||||||       | |||||| || ||||||| |||||||  ||||| |||||||||||||||| ||||| |||||||||||||||    
T  7128204 gagagataaagt-agaaaataatgtgaatatgagagaggaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctctaaa 7128114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 33358050 - 33358195
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | |||||||||| || ||||||||||||||||||  |||||||||  |||||||||||| |||||||| ||||  |||||    
T  33358050 agtgttatttgaacaaccatt-tggttgacaacttatgtgacaaccataatttacaaagaaaaagtgggtatttgcacgaaaatcaaatcaattgagaga 33358148  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    ||||||       | ||||||||| ||||||||||||||||||||||    
T  33358149 taaagtaaaaaaataatgtgagtatgagagagaaagttgtcacaaaa 33358195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 201
Target Start/End: Complemental strand, 38713757 - 38713597
Alignment:
Q  39 taaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaa 138  Q
    ||||||||||||||||||||| ||||| | | | |||||| || | |||||| |||||||||| ||||||||   |||||||||||| ||||||||||||    
T  38713757 taaagagaagtgttatttgaaaaatcatt-tagctgacaacttatatgacaatcataatttataaagaaaaaatgggtatttgcacgaaaatcaaagcaa 38713659  T
Q  139 taaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcac 201  Q
    ||||||||||||||       | || ||| || ||||||||||||||||||||||||||||||    
T  38713658 taaagagataaagt-aaaaaataatatgaatatgagagagaaagttgtcacaaaaattgtcac 38713597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 228
Target Start/End: Complemental strand, 757039 - 756856
Alignment:
Q  43 gagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaa 142  Q
    ||||| |||||||||||||| |||| |||| ||||| || | ||||||||||| ||||  |||||||| | |||||| ||||||||| || ||||||| |    
T  757039 gagaaatgttatttgaacaaccaatttggt-gacaacttatttgacaaccatactttacaaagaaaaaaatggtattggcacggaaaccatagcaataga 756941  T
Q  143 gagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||||       | ||||||||| |||| ||||||||||  ||||| |||||||||||||||| ||||| |||||||||||    
T  756940 gagataaagt-aaaaaataatgtgagtatgagaaagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctc 756856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 48 - 232
Target Start/End: Original strand, 8411611 - 8411793
Alignment:
Q  48 gtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagat 147  Q
    ||||||||||||||| |||| |||| ||||| || | | ||||||||| ||||  ||||||||   |||||| ||||||||| |||| ||||| ||||||    
T  8411611 gtgttatttgaacaaccaatttggt-gacaacttatttaacaaccatattttacaaagaaaaaagtggtattggcacggaaaccaaaacaatagagagat 8411709  T
Q  148 aaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    |||||       | ||||||||| |||||||||||||||  ||||| |||||||||||||||| ||||| |||||||||||||||    
T  8411710 aaagtaaaaaa-taatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctctaaa 8411793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 41 - 229
Target Start/End: Original strand, 32914958 - 32915144
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| | || |||||||||| || ||  |||| |||||||||  |||||||||  |||||||||||| ||| |||| |||||    
T  32914958 aagaggagtgttatttgaacaa-ctatttggttgacaacttttggaacaatcataatttacaaagaaaaagttggtatttgcacgaaaaccaaaacaata 32915056  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
     |||||||||||       | ||||||||| |||||||||||||||||||||| ||||||  |||| ||| ||||| ||||||||||||    
T  32915057 gagagataaagt-aaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttctct 32915144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 47 - 231
Target Start/End: Original strand, 34254243 - 34254425
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||||| | ||||||| || || || |||||| ||||||||  |||||||||   ||||||||||| ||| ||||||||||||||||    
T  34254243 agtgttatttgaacaatcatt-tggttgataacttttgggacaactataatttacaaagaaaaagtttgtatttgcacgaaaaccaaagcaataaagaga 34254341  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    ||||||       | ||||||||| |||||| |||||||||||| || ||||||  ||||| || ||||| ||||||||||||||    
T  34254342 taaagt-aaaaagtaatgtgagtatgagagataaagttgtcacagaagttgtcataaaatgaatgttcaaatatcatttctctaa 34254425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 15704954 - 15705134
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | ||||||| || || |  |||||||||||||||| |||||||||  |||||||||||| ||| |||| ||||| |  ||    
T  15704954 agtgttatttgaacaaccatt-tggttgataacttttaggacaaccataatttataaagaaaaagttggtatttgcacgaaaaccaaaacaatagaatga 15705052  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||       | ||||||||| |||||||||||||||||||||| ||||||  |||||||| ||||| ||||||||||||    
T  15705053 taaagtaaaaag-taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 15705134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 229
Target Start/End: Complemental strand, 45417957 - 45417771
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||||||| || ||||||||| || | || ||||||| || ||||||||||||||||||| ||||||||  | ||||||||||| |||||||| |||||    
T  45417957 aagagaagtcttctttgaacaaccatt-tgattgacaacttatgtgacaaccataatttataaagaaaaaatatgtatttgcacgaaaatcaaaacaata 45417859  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
     ||||||||| |       | ||||||||| |||| |||||||| |   |||||||||||  |||||||||||||| ||||||||||||    
T  45417858 gagagataaa-ttaaaaaatgatgtgagtatgagaaagaaagttatataaaaaattgtcaaaaaatggatcttcaaatatcatttctct 45417771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 227
Target Start/End: Complemental strand, 48326146 - 48325968
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | |||||||||| || || |||||||||||||||  |||||||||  |||||||| ||| |||||||||||||| |||||    
T  48326146 agtgttatttgaacaaccatt-tggttgacaacttttg-gacaaccataatttacaaagaaaaagttggtatttgtacgaaaatcaaagcaatagagaga 48326049  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
    ||||||       | |||| |||| |||||||||||||||  ||||| ||||||| |||| |||  |||| ||||||||||    
T  48326048 taaagtaaaaaaataatgtaagtatgagagagaaagttgttgcaaaagttgtcacaaaatagattatcaaatatcatttct 48325968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 76 - 229
Target Start/End: Complemental strand, 51466918 - 51466768
Alignment:
Q  76 caatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgaga 175  Q
    |||||||  ||||||||||||||||| ||||||||| ||||||||| |||||||||||| ||||| |||||||||||       | ||||||||| || |    
T  51466918 caatttggttgacaaccataatttataaagaaaaagtaggtatttgtacggaaatcaaaacaatagagagataaagt--aaaaataatgtgagtatgaaa 51466821  T
Q  176 gagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    || |||||||||| ||||||| ||| ||||||||| ||||| ||| ||||||||    
T  51466820 gaaaaagttgtca-aaaaattatcattaaatggatgttcaaatattatttctct 51466768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 230
Target Start/End: Original strand, 33024463 - 33024644
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||||||| |||| ||||| || | ||||||||||| ||||  ||||||||   | |||| ||||||||| || ||||||| |||||    
T  33024463 agtgttatttgaacaatcaatttggt-gacaacttatttgacaaccatattttacaaagaaaaaagtgatattggcacggaaaccatagcaatagagaga 33024561  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    |||||        | ||||||||| |||||||||||||||  ||||| |||||||||||| ||| ||||| |||||||||||||    
T  33024562 taaag-aaaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatagatgttcaaatatcatttctcta 33024644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 224
Target Start/End: Original strand, 47215614 - 47215796
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| ||||||||||||||||  ||| ||||||| || || ||||||||||||||||||| ||||||||  | |||||||||||||||  ||| ||||    
T  47215614 aaagaggagtgttatttgaacaactaatttggttgataacttttgtgacaaccataatttataaagaaaaaatatgtatttgcacggaaactaaaacaat 47215713  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatt 224  Q
    | ||| ||||| |       | ||||||||| |||||||||| ||||||||||| |||||| || || ||| ||||| |||||||    
T  47215714 agagaaataaaat--aaaaataatgtgagtatgagagagaaaattgtcacaaaagttgtcattatatagatgttcaaatatcatt 47215796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 47 - 230
Target Start/End: Original strand, 20565010 - 20565191
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| |||| ||||| || | ||||||||||| ||||  ||||||||   ||||||  |||||||| || || |||| |||||    
T  20565010 agtgttatttgaacaaccaatttggt-gacaacttatttgacaaccatattttacaaagaaaaaagtggtattgccacggaaaccatagtaatagagaga 20565108  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||       | ||||||||| |||||||||||||||  |||||||||| ||||||||||| ||||| |||||||||||||    
T  20565109 taaagtaaagag-taatgtgagtatgagagagaaagttgttgcaaaaattgttactaaatggatgttcaaatatcatttctcta 20565191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 42 - 229
Target Start/End: Original strand, 50328028 - 50328213
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| || | |||||||||| || || |||||||||||||||  |||||||||  |||||||||||| ||| ||||||||||     
T  50328028 agaggagtgttatttgaacaaccatt-tggttgacaacttttgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaaccaaagcaatag 50328126  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||||       | | ||||||| || ||||||||||||  ||||| ||||||| || ||||| || || ||||||||||||    
T  50328127 agagataaagt-aaaaagtaacgtgagtatgaaagagaaagttgttgcaaaagttgtcacaaagtggatgtttaaatatcatttctct 50328213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 152
Target Start/End: Original strand, 40316829 - 40316940
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||||||||| || | |||||||||| || |  |||||||||||||||| |||||||||  |||||||||||| ||| |||||||||    
T  40316829 aaagaggagtgttatttgaacaaccatt-tggttgacaacttttaggacaaccataatttataaagaaaaagttggtatttgcacgaaaaccaaagcaat 40316927  T
Q  140 aaagagataaagt 152  Q
    | |||||||||||    
T  40316928 agagagataaagt 40316940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 200
Target Start/End: Complemental strand, 52267387 - 52267231
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| |||| || ||||||  || |||| |||||||||||||| || |||||  |||||||||||| |||| ||||  ||||     
T  52267387 agaggagtgttatttgaacaaccaatttgattgacagcttttgtgccaaccataatttataaataaaaaataggtatttgcacagaaaccaaaaaaatag 52267288  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtca 200  Q
    ||||||||| |       | ||||||||| |||||||||||||||||||||||||||||    
T  52267287 agagataaaat--aaaaataatgtgagtatgagagagaaagttgtcacaaaaattgtca 52267231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 47 - 228
Target Start/End: Complemental strand, 3603290 - 3603111
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| || | ||||| || | ||||||||||| ||||  ||||||||   |||||| ||||||||| || ||||||| |||||    
T  3603290 agtgttatttgaacaaccaatttgat-gacaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagaga 3603192  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||| |       | ||||||||| |||||||||||||||  ||||| |||||||||||||||| ||||| |||||||||||    
T  3603191 taaactaaaaag-taatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctc 3603111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 26967351 - 26967209
Alignment:
Q  85 tgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagtt 184  Q
    ||||||||||||||||| ||||||||| ||||||||||| ||||| |||| ||||| ||||||||| |       | |||||| |  |||||||||||||    
T  26967351 tgacaaccataatttataaagaaaaagtaggtatttgcatggaaaccaaaacaatagagagataaaat--aaaaataatgtgaatgtgagagagaaagtt 26967254  T
Q  185 gtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| |||||| |||||  || ||||| ||||||||||||    
T  26967253 gtcacaaaagttgtcattaaattaatgttcaaatatcatttctct 26967209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 231
Target Start/End: Complemental strand, 47214385 - 47214205
Alignment:
Q  48 gtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagat 147  Q
    ||||||||||||||| |||| | || ||||| || | ||||||||| ||||||  ||||||||| || |||| ||||||||| || | ||||| ||||||    
T  47214385 gtgttatttgaacaaccaattttgt-gacaacttatttgacaaccaaaatttacaaagaaaaagtag-tattggcacggaaaccataacaatagagagat 47214288  T
Q  148 aaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    |||||       | ||||||||| |||||||||||||||||||||| ||||||  |||| ||| ||||| ||||||||||||||    
T  47214287 aaagtaaaaaa-taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttctctaa 47214205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 46082013 - 46082193
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||| |||||||| |||| || ||||| | ||||||| ||| ||||  ||||||||   ||||||  |||||||| || ||||||| |||||    
T  46082013 agtgttatttgagcaatcaatttggt-gataatttatttgacaactatattttacaaagaaaaaagtggtattgacacggaaaccatagcaatagagaga 46082111  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||       | ||||||||| | |||||||||||||  ||||| |||||||||||||||| ||||| ||||||||||||    
T  46082112 taaagtaaaaag-taatgtgagtatgcgagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctct 46082193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 48 - 226
Target Start/End: Complemental strand, 51191966 - 51191790
Alignment:
Q  48 gtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagat 147  Q
    ||||||||||||||| |||| |||| ||||| || | ||||||||||| ||||  |||||||| | |||||| ||||||||| || | ||||| ||||||    
T  51191966 gtgttatttgaacaaccaatttggt-gacaacttatttgacaaccatattttacaaagaaaaaaatggtattggcacggaaagcataacaatagagagat 51191868  T
Q  148 aaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttc 226  Q
    |||||       | ||||||||| |||||| |||||||| |||||| |||||||| ||||||| || || |||||||||    
T  51191867 aaagt-aaaatgtaatgtgagtatgagagaaaaagttgttacaaaagttgtcactgaatggatgttgaaatatcatttc 51191790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 11823137 - 11823034
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||| |||||| ||||||||||||| |  |||||| ||||||||| |||||| || || || ||||||||||||||||  |||| |||||    
T  11823137 agtgttatttgaaccatcaatttggttgacaatttatcggacaacgataatttataaagaaatagtagatagttgcacggaaatcaaaataatagagaga 11823038  T
Q  147 taaa 150  Q
    ||||    
T  11823037 taaa 11823034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 902780 - 902637
Alignment:
Q  85 tgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagtt 184  Q
    |||||| |||| ||||  ||||||||   |||||| |||||||||||| ||||||| |||||||||||       | ||||||||| |||||||||||||    
T  902780 tgacaatcatattttacaaagaaaaaagtggtattagcacggaaatcatagcaatagagagataaagtaaaaag-taatgtgagtatgagagagaaagtt 902682  T
Q  185 gtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    || | |||| |||||||||||| ||| ||||| ||||||||||||    
T  902681 gttataaaagttgtcactaaatagatgttcaaatatcatttctct 902637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 50881997 - 50882106
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| || | || |||||||||| |||||||| |||||||||| ||||||||    ||||||||||| ||||||||| ||||     
T  50881997 agaggagtgttatttgaacaaccatt-tgattgacaatttatgtgacaatcataatttataaagaaaaaatgagtatttgcacgaaaatcaaagtaatag 50882095  T
Q  142 agagataaagt 152  Q
    |||||||||||    
T  50882096 agagataaagt 50882106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 41 - 229
Target Start/End: Original strand, 51286254 - 51286439
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| |||| | || ||||| || | ||||||||| ||||||  ||||||||| || |||| ||||||||| || |||||||    
T  51286254 aagagtagtgttatttgaacaaccaattttgt-gacaacttatttgacaaccaaaatttacaaagaaaaagtag-tattggcacggaaaccatagcaata 51286351  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
     ||||||||| |       | ||||||||| |||||||||||||||||||||| ||||||  ||||  || ||||| ||||||||||||    
T  51286352 gagagataaaataaaaaa-taatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaataaatgttcaaatatcatttctct 51286439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 49 - 199
Target Start/End: Original strand, 51436664 - 51436814
Alignment:
Q  49 tgttatttgaacaatcaatctggttgacaatttgtgtgacaaccata-atttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagat 147  Q
    ||||||||||||||| ||| |||||||||| || | ||||||||||| |||||  ||||||||| |||||||  || | ||| |||| ||||||||||||    
T  51436664 tgttatttgaacaat-aatttggttgacaacttatatgacaaccatagatttacaaagaaaaagtaggtattgacatgaaaaccaaaacaataaagagat 51436762  T
Q  148 aaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtc 199  Q
    |||||         ||||||||| |||||| |||||||||||||||||||||    
T  51436763 aaagtaaaaacaaaatgtgagtatgagagataaagttgtcacaaaaattgtc 51436814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 216
Target Start/End: Complemental strand, 21340706 - 21340534
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| ||||||||||||||||||||| ||| |||||| || | ||||||||||| |||| ||||||||| | | ||||  |||||||| || |||||||    
T  21340706 aagaggagtgttatttgaacaatcaatttgg-tgacaacttatttgacaaccatatttta-caagaaaaaaatgttattgacacggaaaccatagcaata 21340609  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaa 216  Q
     |||||||||||       | ||||||||| || ||||||||||||  ||||| ||||||||||||| || |||||    
T  21340608 gagagataaagt-aaaaagtaatgtgagtatgaaagagaaagttgttgcaaaagttgtcactaaatgaatgttcaa 21340534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 228
Target Start/End: Original strand, 44789074 - 44789214
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    |||||||| |||||   ||||||||  ||||||| ||||| |||||||||||||| |||||||||||       | ||||||||| || |||||||||||    
T  44789074 gacaaccaaaatttgcaaagaaaaaataggtatt-gcacgaaaatcaaagcaatagagagataaagtaaaaaa-tgatgtgagtatgaaagagaaagttg 44789171  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    | |||||| ||||||| |||||||| ||||| |||||||||||    
T  44789172 taacaaaagttgtcacaaaatggatgttcaaatatcatttctc 44789214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 228
Target Start/End: Original strand, 47820463 - 47820572
Alignment:
Q  119 ttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagt 218  Q
    ||||||| |||||||||||||| |||||||||||       | ||||||||| || |||||||||||| |||||| ||||||  |||||||| ||||| |    
T  47820463 ttgcacgaaaatcaaagcaatagagagataaagtaaaaaaatgatgtgagtatgaaagagaaagttgtaacaaaagttgtcataaaatggatgttcaaat 47820562  T
Q  219 atcatttctc 228  Q
    ||||||||||    
T  47820563 atcatttctc 47820572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 231
Target Start/End: Original strand, 1852843 - 1853025
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||| || |||| || | ||||| || | ||||||||||| ||||  ||||||||   |||||| ||||||||| || ||||||| |||||    
T  1852843 agtgttatttgaataaccaatttgat-gacaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagcaatagagaga 1852941  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
     ||||        | ||||||||| |||||||||||||||  ||||| |||||||||||| ||| ||||| ||||||||||||||    
T  1852942 caaag-aaaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatagatgttcaaatatcatttctctaa 1853025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 8200233 - 8200110
Alignment:
Q  69 tggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgag 168  Q
    |||||||||| || || |||||||||||||||  ||||||||| | ||| ||||||| ||| |||||||||| || ||||||||       | |||||||    
T  8200233 tggttgacaacttatgggacaaccataatttacaaagaaaaagtacgtagttgcacgaaaaccaaagcaatagagggataaagt-aaaaaataatgtgag 8200135  T
Q  169 tacgagagagaaagttgtcacaaaa 193  Q
    || ||||||||||||||||||||||    
T  8200134 tatgagagagaaagttgtcacaaaa 8200110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 228
Target Start/End: Complemental strand, 9008410 - 9008225
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| ||||||||||||||||||||| ||| |||||| || | ||||||||||| ||||  ||||||||   |||||| |||  |||| ||  ||||||    
T  9008410 aagaggagtgttatttgaacaatcaatttgg-tgacaacttatttgacaaccatactttacaaagaaaaaagtggtattggcatagaaaccatggcaata 9008312  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
     |||||||||||       | ||||||||| |||||||||||||||  ||||| ||||||||||||| |  ||||| ||| |||||||    
T  9008311 gagagataaagt-aaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatgaacgttcaaatattatttctc 9008225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 85 - 228
Target Start/End: Original strand, 21486247 - 21486388
Alignment:
Q  85 tgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagtt 184  Q
    |||||||||| |||||| ||||||||| || |||| ||||||||| || ||||||| |||||||||||       | ||||||||| |||||||||||||    
T  21486247 tgacaaccatgatttataaagaaaaagtag-tattggcacggaaaccatagcaatagagagataaagt-aaaaaataatgtgagtatgagagagaaagtt 21486344  T
Q  185 gtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
     | |||| | ||||||| |||| ||| ||||| |||||||||||    
T  21486345 attacaatagttgtcaccaaatagatgttcaaatatcatttctc 21486388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 35539165 - 35539269
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||| ||| ||| |||||| || ||||||||  ||||||||  ||||||||| | ||||||||||||||| |||| ||| | |||||    
T  35539165 agtgttatttgaacaattaatttggctgacaactt-tgtgacaaatataatttacaaagaaaaagtatgtatttgcacggaaaccaaaacaacagagaga 35539263  T
Q  147 taaagt 152  Q
    ||||||    
T  35539264 taaagt 35539269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 83 - 229
Target Start/End: Original strand, 35539286 - 35539432
Alignment:
Q  83 tgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaag 182  Q
    ||||||||||||||||||  ||||||||  | |||||||||||||||  ||| |||||||||||||||||       | |||||| ||  |||| |||||    
T  35539286 tgtgacaaccataatttacaaagaaaaattaagtatttgcacggaaactaaaacaataaagagataaagt-aaaaaataatgtgaatataagagtgaaag 35539384  T
Q  183 ttgtcac-aaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||| ||||||||||| |||||  || ||||| ||||||||||||    
T  35539385 ttgtcacaaaaaattgtcaataaataaatattcaaatatcatttctct 35539432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 48625016 - 48624951
Alignment:
Q  87 acaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagt 152  Q
    ||||||||||||||| ||||||||| | ||||||||| | |||||||||||||| |||||||||||    
T  48625016 acaaccataatttataaagaaaaagtatgtatttgcatgaaaatcaaagcaatagagagataaagt 48624951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 42 - 193
Target Start/End: Original strand, 50781457 - 50781606
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| || | |||| ||||| || |  ||||| |||||||||| ||||||||   |||||||||||| ||| ||||||||||     
T  50781457 agaggagtgttatttgaacaaccatt-tggtagacaacttttaggacaatcataatttataaagaaaaaattggtatttgcacgaaaaccaaagcaatag 50781555  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    |||||||||||       | ||||||||| ||||||||||||||||| ||||    
T  50781556 agagataaagt-aaaaagtaatgtgagtatgagagagaaagttgtcataaaa 50781606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 7171241 - 7171309
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||| |||||| ||||||||||||||| |||||| ||||| ||| ||||| |||||||||||||    
T  7171241 atgtgagtatgagagataaagttgtcacaaaagttgtcattaaatagatgttcaaatatcatttctcta 7171309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 9566966 - 9567034
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||| |||||||||||||||||||||| ||||||  |||||| | ||||| |||||||||||||    
T  9566966 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctcta 9567034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 228
Target Start/End: Complemental strand, 16987121 - 16986938
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| ||||||||||||| ||| ||| |||| ||||| || | ||||||  | ||||||  ||||||||| || ||||  ||||||||||| |||||||     
T  16987121 agaggagtgttatttgaagaattaatttggt-gacaacttatttgacaattaaaatttacaaagaaaaagtag-tattgacacggaaatcatagcaatag 16987024  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    | |||||||||       | ||||||||| |||||||||||||||||||| |||| |||| ||||| || ||||| |||||||||||    
T  16987023 aaagataaagtaaaaaa-taatgtgagtatgagagagaaagttgtcacaataattatcaccaaatgaatgttcaaatatcatttctc 16986938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 18336286 - 18336181
Alignment:
Q  87 acaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgt 186  Q
    ||||||||||||||  ||||||| | |||||| |||||  |||||||||||||| |||||||||||       | ||||||||| |||||||||||||||    
T  18336286 acaaccataatttacaaagaaaaggtaggtatctgcacaaaaatcaaagcaatagagagataaagt-aaaaactaatgtgagtatgagagagaaagttgt 18336188  T
Q  187 cacaaaa 193  Q
    |||||||    
T  18336187 cacaaaa 18336181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 229
Target Start/End: Original strand, 37588638 - 37588747
Alignment:
Q  119 ttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagt 218  Q
    ||||||| |||||||||||||| |||||||||||       ||||||||||| || |||||||||||| |||||| ||||||| ||||  || ||||| |    
T  37588638 ttgcacgaaaatcaaagcaatagagagataaagtaaaaaa-ttatgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaataaatgttcaaat 37588736  T
Q  219 atcatttctct 229  Q
    |||||||||||    
T  37588737 atcatttctct 37588747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 232
Target Start/End: Complemental strand, 47721550 - 47721405
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    |||||||||||||||  ||||||||| | |||||  |||| |||||||||||||| |||||||||||       | |||||| || |||| |||||||||    
T  47721550 gacaaccataatttacaaagaaaaagtaagtattgacacgaaaatcaaagcaatagagagataaagt-aaaaaataatgtgaatatgagacagaaagttg 47721452  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    |||||||| ||||||  ||||  || || || |||||||||||||||    
T  47721451 tcacaaaagttgtcaaaaaataaatgtttaaatatcatttctctaaa 47721405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 232
Target Start/End: Complemental strand, 47728542 - 47728397
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    |||||||||||||||  ||||||||| | |||||  |||| |||||||||||||| |||||||||||       | |||||| || |||| |||||||||    
T  47728542 gacaaccataatttacaaagaaaaagtaagtattgacacgaaaatcaaagcaatagagagataaagt-aaaaaataatgtgaatatgagacagaaagttg 47728444  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    |||||||| ||||||  ||||  || || || |||||||||||||||    
T  47728443 tcacaaaagttgtcaaaaaataaatgtttaaatatcatttctctaaa 47728397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 48220036 - 48220180
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||||| | |||||||||| || || || | ||||||| |   |||||||||  |||||||||||  ||||||||| |||| |||||    
T  48220036 agtgttatttgaacaatcatt-tggttgacaacttatgggaaagccataatcttcaaagaaaaagttggtatttgcacaaaaatcaaagaaatagagaga 48220134  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    ||||||       | ||||||||| ||||||||||||||||||||||    
T  48220135 taaagt-aaaaaataatgtgagtatgagagagaaagttgtcacaaaa 48220180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 48983673 - 48983740
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| |||||||||||||||||||||| ||||||  |||||| | ||||| ||||||||||||    
T  48983673 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctct 48983740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 228
Target Start/End: Original strand, 52714793 - 52714972
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | || ||||||| || || |||||| ||||||||  |||||||||  |||| ||||||| ||| |||| ||||| |||||    
T  52714793 agtgttatttgaacaaccatt-tgattgacaacttttgggacaacaataatttacaaagaaaaagttggtaattgcacgaaaaccaaaacaatagagaga 52714891  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||       | | ||||||| |||| ||||| ||||||||||| |||| |  |||||||| ||||| |||||||||||    
T  52714892 taaagt-aaaaagtaacgtgagtatgagaaagaaaattgtcacaaaagttgttataaaatggatgttcaaatatcatttctc 52714972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 232
Target Start/End: Original strand, 4514339 - 4514529
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| ||||||||||||||||||||| | || ||||| || | |||||| |||| ||||  ||||||||   | |||| ||||||||| || ||||||    
T  4514339 aaagaggagtgttatttgaacaatcaatttagt-gacaacttatttgacaaacatattttacaaagaaaaaagtgatattggcacggaaaccatagcaat 4514437  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    | | |||||||||       | |||||| || |||| ||||||||||  ||||| |||| ||||||||||| || || |||||||||||||||    
T  4514438 agaaagataaagtaaaaaa-taatgtgaatatgagatagaaagttgttgcaaaagttgtaactaaatggatattaaaatatcatttctctaaa 4514529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 230
Target Start/End: Original strand, 26585771 - 26585952
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| || | ||||| || | ||||||||||| ||||  ||||||||   ||||||  |||||||| || | ||||| || ||    
T  26585771 agtgttatttgaacaaccaatttgat-gacaacttatttgacaaccatactttacaaagaaaaaagtggtattgacacggaaaccataacaatagagcga 26585869  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||       | |||||||||   |||||||||||||  ||||| |||||||||||||||| ||||| |||||||||||||    
T  26585870 taaagtaaaaaa-taatgtgagtataggagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctcta 26585952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 29154964 - 29154860
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||||||||| || | |||||||||| || || |||||| ||||||||  ||||||| | ||||||||||||| ||| |||| ||||    
T  29154964 aaagaggagtgttatttgaacaaccatt-tggttgacaacttatgggacaacgataatttacaaagaaaacgtaggtatttgcacgaaaaccaaaacaat 29154866  T
Q  140 aaagag 145  Q
    | ||||    
T  29154865 atagag 29154860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 193
Target Start/End: Original strand, 41507082 - 41507231
Alignment:
Q  43 gagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaa 142  Q
    |||| ||||||||||||||| | || |||||||||| || | ||||||| ||||||||  ||||||||| |||||||  || | ||| ||||  |||| |    
T  41507082 gagatgtgttatttgaacaa-ccatttggttgacaacttatttgacaactataatttacaaagaaaaagtaggtattgacatgaaaaccaaaataataga 41507180  T
Q  143 gagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
     |||||||||       | ||||||||| ||||||||||||||||||||||    
T  41507181 tagataaagtaagaacataatgtgagtatgagagagaaagttgtcacaaaa 41507231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 229
Target Start/End: Complemental strand, 50824925 - 50824740
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| || | |||| ||||| || ||  ||||||||||||||  ||||||||| |||||||  || | ||| ||||||||||     
T  50824925 agaggagtgttatttgaacaaccatt-tggtggacaacttatgatacaaccataatttacaaagaaaaagtaggtattgacatgaaaaccaaagcaatag 50824827  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||||       | || |||||| |||||||||| |||||||||||||| |||  ||||  || || || ||||||||||||    
T  50824826 agagataaagt-aaaaaataatatgagtatgagagagaaaattgtcacaaaaattatcaagaaattaatatttaaatatcatttctct 50824740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 15015576 - 15015433
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| | || ||||||| ||||  || |||||||||||||||  |||||||||  |||||||||||| ||| |||| ||||| ||| |    
T  15015576 agtgttatttgaacaa-ctatttggttgataatta-tgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaaccaaaacaatagagata 15015479  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    ||||||       | |||| |||| ||||||||||||||||||||||    
T  15015478 taaagt-aaaaaataatgtaagtatgagagagaaagttgtcacaaaa 15015433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 33054045 - 33054158
Alignment:
Q  113 aggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatct 212  Q
    ||||||||||||  |||||||||| ||| |||||||||||       | ||||||||| |||||||||||||||  ||||| ||||||| ||||| || |    
T  33054045 aggtatttgcacaaaaatcaaagccatagagagataaagtaaaaaa-taatgtgagtatgagagagaaagttgtagcaaaagttgtcacaaaatgaatgt 33054143  T
Q  213 tcaagtatcatttct 227  Q
    |||| ||||||||||    
T  33054144 tcaaatatcatttct 33054158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 34008246 - 34008178
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||| |||| ||||||||||||||||| ||||||  |||| ||| ||||| |||||||||||||    
T  34008246 atgtgagtatgagatagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttctcta 34008178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 230
Target Start/End: Original strand, 34040460 - 34040573
Alignment:
Q  116 tatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttca 215  Q
    |||||||||| ||||||||| |||| |||||||||||       | ||||||||| |||||||||||||||   |||| || |||| |||||||| ||||    
T  34040460 tatttgcacgaaaatcaaagtaatagagagataaagtaaaaaa-taatgtgagtatgagagagaaagttgttgtaaaagttatcacaaaatggatgttca 34040558  T
Q  216 agtatcatttctcta 230  Q
    | |||||||||||||    
T  34040559 aatatcatttctcta 34040573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 228
Target Start/End: Original strand, 46543330 - 46543513
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| || | ||||||| ||||| || |||||  ||||||||  || ||||||  | |||||||||| ||| ||||||||||     
T  46543330 agaggagtgttatttgaacaaccatt-tggttgataatttttgggacaattataatttaaaaa-aaaaagttgatatttgcacgaaaaccaaagcaatag 46543427  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||||||||       |  |||||||| |||||||||| || ||||||| ||| |||  |||||||| ||||| |||||||||||    
T  46543428 agagataaagt-aaaaaatagtgtgagtatgagagagaaaattatcacaaagattatcataaaatggatgttcaaatatcatttctc 46543513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 229
Target Start/End: Complemental strand, 46911401 - 46911292
Alignment:
Q  119 ttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagt 218  Q
    ||||||| |||||||||||||| |||||||||||       | ||||||||| || ||| |||||||| |||||| ||||||| |||||||| || || |    
T  46911401 ttgcacgaaaatcaaagcaatagagagataaagtaaaaaa-tgatgtgagtatgaaagaaaaagttgtaacaaaagttgtcacaaaatggatgttgaaat 46911303  T
Q  219 atcatttctct 229  Q
    |||||||||||    
T  46911302 atcatttctct 46911292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 50775131 - 50775200
Alignment:
Q  131 caaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtca 200  Q
    |||||||||| |||||||||||       | ||||||||| |||||||||||||||||||||||||||||    
T  50775131 caaagcaatagagagataaagtaaaaacataatgtgagtatgagagagaaagttgtcacaaaaattgtca 50775200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 4213138 - 4213071
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| |||||||||||||||||||||| || |||  |||||| | ||||| ||||||||||||    
T  4213138 atgtgagtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttctct 4213071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 192
Target Start/End: Complemental strand, 6143870 - 6143719
Alignment:
Q  39 taaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaa 138  Q
    ||||||| | ||||||||||||||||| | ||||||||||  | |  |||||||||||||||  ||||||||| ||||||||||||| ||| ||| |||     
T  6143870 taaagaggattgttatttgaacaatcatt-tggttgacaacatttaagacaaccataatttacaaagaaaaagtaggtatttgcacgaaaaccaatgcac 6143772  T
Q  139 taaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaa 192  Q
    || | | |||||||       | |||| |||| |||||||||||||||||||||    
T  6143771 tagaaatataaagt-aaaaaataatgtaagtatgagagagaaagttgtcacaaa 6143719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 229
Target Start/End: Original strand, 33125254 - 33125395
Alignment:
Q  85 tgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagtt 184  Q
    |||||| |||||||||| ||||||||| |||||||||||   ||| |||||||||| | |||||||||       | |||||||||   || ||||| ||    
T  33125254 tgacaatcataatttataaagaaaaagtaggtatttgcataaaaaccaaagcaatagaaagataaagt-aaaaagtaatgtgagta--tgaaagaaaatt 33125350  T
Q  185 gtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||||| |||  |||||||| ||||| ||||||||||||    
T  33125351 gtcacaaaaattatcataaaatggatgttcaaatatcatttctct 33125395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 46281579 - 46281436
Alignment:
Q  85 tgacaaccataa-tttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagt 183  Q
    |||||||||||| ||||  ||| ||||| |||| || ||| | |||||||||||||| |||||||||||       | ||||||||| ||||||||||||    
T  46281579 tgacaaccataaatttacaaaggaaaagtaggttttggcatgaaaatcaaagcaatagagagataaagtaaaaacat-atgtgagtatgagagagaaagt 46281481  T
Q  184 tgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||||||| | || |||| | | | ||| |||||||||||    
T  46281480 tgtcacaaaaattattacaaaatagttgtacaaatatcatttctc 46281436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 48858889 - 48858822
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| |||||||||||||||||||||| ||||||  || ||| | ||||| ||||||||||||    
T  48858889 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttctct 48858822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 649834 - 649768
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||||||||||||||| |||| |  |||||| | ||||| |||||||||||    
T  649834 atgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaaatggttgttcaaatatcatttctc 649768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 193
Target Start/End: Original strand, 19969491 - 19969598
Alignment:
Q  85 tgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagtt 184  Q
    ||||||||||||||||  ||||||| |  ||||| |||||| ||| |||||||||| |||||||||||       | ||||||||| |||||||||||||    
T  19969491 tgacaaccataatttacaaagaaaacgttggtatgtgcacgaaaaccaaagcaatagagagataaagt-aaaaagtaatgtgagtatgagagagaaagtt 19969589  T
Q  185 gtcacaaaa 193  Q
    |||| ||||    
T  19969590 gtcataaaa 19969598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 36673627 - 36673727
Alignment:
Q  50 gttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataa 149  Q
    |||||||||||||||||| ||| ||| || || | ||||||||||||||||  ||||||||| | |||||  |||||||| || ||||||| ||||||||    
T  36673627 gttatttgaacaatcaatttgg-tgataacttatttgacaaccataatttacaaagaaaaagta-gtattgacacggaaaccatagcaatagagagataa 36673724  T
Q  150 agt 152  Q
    |||    
T  36673725 agt 36673727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 40439845 - 40439911
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||| ||| ||||||||||||||||| |||| ||||||  |||||| | |||||||||||||||||    
T  40439845 atgtgtgtatgagagagaaagttgtcataaaagttgtcaaaaaatggttgttcaagtatcatttctc 40439911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 47642612 - 47642678
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||||||||||||||| || |||  |||||| | ||||| |||||||||||    
T  47642612 atgtgagtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttctc 47642678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 229
Target Start/End: Complemental strand, 9988052 - 9987950
Alignment:
Q  127 aaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttc 226  Q
    |||||||||||||| ||||| |||||       | ||||||||| || ||||||||||||||||||| ||||||  || ||| | ||||| |||||||||    
T  9988052 aaatcaaagcaatagagagagaaagtaaaaatataatgtgagtatgaaagagaaagttgtcacaaaagttgtcaaaaattggttgttcaaatatcatttc 9987953  T
Q  227 tct 229  Q
    |||    
T  9987952 tct 9987950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 11097888 - 11097956
Alignment:
Q  160 ttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||||| |||||||||||||||  ||||| ||||||| |||||||| | ||| ||||||||||||    
T  11097888 ttatgtgagtatgagagagaaagttgt-tcaaaagttgtcacaaaatggatgtacaaatatcatttctct 11097956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 229
Target Start/End: Complemental strand, 26837636 - 26837451
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| |||| |||| ||||| || | ||||||||||| ||||  ||||||||   ||||||  ||| ||||  | |||||||     
T  26837636 agaggagtgttatttgaacaaccaatttggt-gacaacttatttgacaaccatattttacaaagaaaaaagtggtattgacacagaaactatagcaatag 26837538  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||||       | | ||||||| |||||||||| ||||  ||||| |||| ||||| ||||| ||||| ||||||||||||    
T  26837537 agagataaagtaaaaag-taacgtgagtatgagagagaaaattgttgcaaaagttgttactaagtggatgttcaaatatcatttctct 26837451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 31827011 - 31826946
Alignment:
Q  167 agtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    |||| ||||||||||||||||||||||||||| |  |||||| | ||||| |||| ||||||||||    
T  31827011 agtatgagagagaaagttgtcacaaaaattgtaaaaaaatggttgttcaaatatcctttctctaaa 31826946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 36779161 - 36779265
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||||||| |||| || ||||| | |||||| |||| ||||  ||||||||   | ||||  ||||||||||| ||||||| |||||    
T  36779161 agtgttatttgaacaatcaatttggt-gataatttatttgacaatcatattttacaaagaaaaaagtgatattgacacggaaatcatagcaatagagaga 36779259  T
Q  147 taaagt 152  Q
    ||||||    
T  36779260 taaagt 36779265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 51193137 - 51193205
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    ||||||||| |||||||||||||||| |||||||||| |  |||||||| | ||| ||||||||||||||    
T  51193137 atgtgagtatgagagagaaagttgtc-caaaaattgttataaaatggatgtacaaatatcatttctctaa 51193205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 1689457 - 1689421
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| |||||||||||||||||||||||||||    
T  1689457 atgtgagtatgagagagaaagttgtcacaaaaattgt 1689421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 1790571 - 1790507
Alignment:
Q  165 tgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||| |||||||||||||||  ||||| ||||||| ||||| || ||||| ||||||||||||    
T  1790571 tgagtatgagagagaaagttgttgcaaaagttgtcaccaaatgaatgttcaaatatcatttctct 1790507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 8447915 - 8447771
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||||| | | ||||| || || |||||||| |||||||||  |||||||||  | |||||||||  |||  ||| ||||| |||||    
T  8447915 agtgttatttgaacaatcatt-tagttgataacttatgtgacaatcataatttacaaagaaaaagttgatatttgcacaaaaactaaaacaatagagaga 8447817  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    ||||||       | |||||||||  |||||||||||||||||||||    
T  8447816 taaagt-aaaaaatgatgtgagtataagagagaaagttgtcacaaaa 8447771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 24806230 - 24806294
Alignment:
Q  165 tgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||| |||||||||||||||||||||| ||||||  || ||| | ||||| ||||||||||||    
T  24806230 tgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttattcaaatatcatttctct 24806294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 30536057 - 30536021
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| |||||||||||||||||||||||||||    
T  30536057 atgtgagtatgagagagaaagttgtcacaaaaattgt 30536021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 43893323 - 43893255
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    |||||| || |||||||||| |||||| |||| |||| || |||||||| ||||| |||||||||||||    
T  43893323 atgtgaatatgagagagaaaattgtcataaaagttgtgacaaaatggatgttcaaatatcatttctcta 43893255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 46172412 - 46172479
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||| |||||||||| || | |||||| |||||||||| ||||| ||||| |||||||||||||    
T  46172412 atgtgagtatgagagagaaaattattacaaaagttgtcactaa-tggatgttcaaatatcatttctcta 46172479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 52437595 - 52437526
Alignment:
Q  127 aaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaatt 196  Q
    |||||||||||||| | |||||||||       | ||||||||| |||||||||||||||||||||||||    
T  52437595 aaatcaaagcaatagaaagataaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaaatt 52437526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 8350202 - 8350268
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| |||||||||||||||||||||| |||| |  |||||| | ||||| ||||||||||||    
T  8350202 atgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttctct 8350268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 11947861 - 11947794
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||| |||| |||||||||||||||||||||| ||||||  |||||| | | ||| ||||||||||||    
T  11947861 atgtcagtatgagagagaaagttgtcacaaaagttgtcataaaatggttgtacaaatatcatttctct 11947794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 19947757 - 19947812
Alignment:
Q  173 agagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||||||||||||||| ||||||  |||||| | ||||| |||||||||||    
T  19947757 agagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 19947812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 21433406 - 21433473
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||  ||||||||||||||||||||| |||| || |||||| | | ||| ||||||||||||    
T  21433406 atgtgagtataagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctct 21433473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 27742683 - 27742616
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||| ||| |||||||||||||||||||||| ||||||  || ||| | ||||| ||||||||||||    
T  27742683 atgtgtgtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttctct 27742616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 46902668 - 46902610
Alignment:
Q  172 gagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    |||||||||||||||| ||||||||||||| |||| | | | ||||||||||||||||||    
T  46902668 gagagagaaagttgtc-caaaaattgtcacaaaatagttatacaagtatcatttctctaa 46902610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 49446803 - 49446870
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||| |||| ||||||||||||||||||||||||||  || |||||| | | ||| ||||||||||||    
T  49446803 atgtaagtatgagagagaaagttgtcacaaaaattggtacaaaatggttttacaaatatcatttctct 49446870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 196
Target Start/End: Original strand, 5771753 - 5771787
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaatt 196  Q
    ||||||||| |||||||||||||||||||||||||    
T  5771753 atgtgagtatgagagagaaagttgtcacaaaaatt 5771787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 230
Target Start/End: Original strand, 21093288 - 21093431
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    |||||||||||||||  ||||||||| || ||||   ||| |||||||||||||| ||||||||| |       | |||||| || ||  |||||||||     
T  21093288 gacaaccataatttacaaagaaaaagtagatattaatacgaaaatcaaagcaatagagagataaaat-aaaaaataatgtgaatatgaatgagaaagtta 21093386  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||||  |||  |||||||| ||||| |||||||||||||    
T  21093387 tcacaaaaataatcaaaaaatggattttcaaatatcatttctcta 21093431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 25259224 - 25259158
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagt 152  Q
    |||||||||||||||| ||||||||   |||||||||| | |||||||| ||||| ||| |||||||    
T  25259224 gacaaccataatttataaagaaaaaattggtatttgcatgaaaatcaaaacaatagagaaataaagt 25259158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 30530580 - 30530657
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaagtaaatta 240  Q
    ||||||||| ||||||||||||||||  |||| ||||||| |||||| | |  || ||||||||||||||| |||||||    
T  30530580 atgtgagtatgagagagaaagttgtc-taaaagttgtcacaaaatggttgtataaatatcatttctctaaaataaatta 30530657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 37685396 - 37685331
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||||||||||||||| |||| |  |||||| | ||||| |||||||||||    
T  37685396 atgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttctc 37685331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 37700122 - 37700187
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||||||||||||||| |||| |  |||||| | ||||| |||||||||||    
T  37700122 atgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttctc 37700187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 44294081 - 44294015
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||| || |  ||||||||||||| |||| ||| ||||| |||||||||||    
T  44294081 atgtgagtatgagagagaaaattattgcaaaaattgtcacaaaatagatattcaaatatcatttctc 44294015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 49570062 - 49569996
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||| || |||||||||||||||||||||| |||| |  |||||||| | ||| |||||||||||    
T  49570062 atgtgaatatgagagagaaagttgtcacaaaagttgttaggaaatggatgtacaaatatcatttctc 49569996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 49660245 - 49660175
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    ||||||||| |||||| |||||||||||| |  ||||||| |||||| | || || |||||||||||||||    
T  49660245 atgtgagtatgagagataaagttgtcacataggttgtcacaaaatggttgttaaaatatcatttctctaaa 49660175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 7078504 - 7078572
Alignment:
Q  160 ttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||||| |||||||||||||||  ||||| ||||||| |||| ||| | ||| ||||||||||||    
T  7078504 ttatgtgagtatgagagagaaagttgt-tcaaaagttgtcacaaaatagatgtacaaatatcatttctct 7078572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 38303580 - 38303684
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| |||| || || || | ||||||||||| ||||  ||||||||   |||||| ||||||||| ||  |||||| |||||    
T  38303580 agtgttatttgaacaaccaatttggt-gataacttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatggcaatagagaga 38303678  T
Q  147 taaagt 152  Q
    ||||||    
T  38303679 taaagt 38303684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 48392348 - 48392283
Alignment:
Q  85 tgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaa 150  Q
    |||||| |||||||||  ||||||| | ||||||||||| ||||||||| | |||||| |||||||    
T  48392348 tgacaatcataatttacaaagaaaatgtaggtatttgcatggaaatcaatgtaataaaaagataaa 48392283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 20288347 - 20288411
Alignment:
Q  164 gtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||| ||||||||||||||||  |||| ||||||| || ||||| | ||| |||||||||||    
T  20288347 gtgagtatgagagagaaagttgtctaaaaagttgtcacaaattggatgtacaaatatcatttctc 20288411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 27465063 - 27465099
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  27465063 atgtgagtatgagagagaaagttgtcacaaaagttgt 27465099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 30467543 - 30467599
Alignment:
Q  174 gagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    |||||||||||||||||||| ||||||  |||||  | ||||| |||||||||||||    
T  30467543 gagagaaagttgtcacaaaagttgtcaaaaaatgactgttcaaatatcatttctcta 30467599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 150
Target Start/End: Complemental strand, 37178879 - 37178780
Alignment:
Q  51 ttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaaga-aggtatttgcacggaaatcaaagcaataaagagataa 149  Q
    ||||||||||||||||| ||| |||||| || | ||||||||||| ||||| || ||||| |  ||||||  |||||||| || |||||||||||| |||    
T  37178879 ttatttgaacaatcaatttgg-tgacaacttatttgacaaccatattttataaaaaaaaaaagtggtattgacacggaaaccatagcaataaagagctaa 37178781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 49559214 - 49559270
Alignment:
Q  172 gagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||||||||||||||||||| |||| |  |||||||| | ||| |||||||||||    
T  49559214 gagagagaaagttgtcacaaaagttgttaggaaatggatatacaaatatcatttctc 49559270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 79)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 232
Target Start/End: Original strand, 189588 - 189778
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| ||||||||||||||||||| | |||||||||| || || ||||| |||||||||| |||||||||  | |||||||||| ||| |||||||||    
T  189588 aaagaggagtgttatttgaacaatcatt-tggttgacaacttttgggacaatcataatttataaagaaaaagttgatatttgcacgaaaaccaaagcaat 189686  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    | |||||||||||       | ||||||||| |||||||||||||||||||||| || |||  |||||||| ||||| |||||||||||||||    
T  189687 agagagataaagt-aaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttatcataaaatggatgttcaaatatcatttctctaaa 189778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 227
Target Start/End: Complemental strand, 10649626 - 10649436
Alignment:
Q  35 aaagtaaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaa 134  Q
    |||| |||||| |||||||||||||||| || | |||||||||| || ||||||||||||||||||  |||||||||  ||||| |||||| ||||||||    
T  10649626 aaagaaaagaggagtgttatttgaacaaccatt-tggttgacaacttttgtgacaaccataatttacaaagaaaaagttggtatgtgcacgaaaatcaaa 10649528  T
Q  135 gcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
    |||||| |||||||||||       | ||||||||| || ||||||||||||||||||| ||||||  |||||||| ||||| ||||||||||    
T  10649527 gcaatagagagataaagt-aaaaagtaatgtgagtatgaaagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttct 10649436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 228
Target Start/End: Original strand, 41175592 - 41175777
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| || | |||||||||| || ||||||||||||||||||  |||||||||  |||||||||||| | ||||||||||||    
T  41175592 aagaggagtgttatttgaacaaccatt-tggttgacaacttatgtgacaaccataatttacaaagaaaaagtgggtatttgcacgaagatcaaagcaata 41175690  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
     |||||||||||       | ||||||||| |||||||||||||||||||||| || || | |||| ||| ||||| |||||||||||    
T  41175691 gagagataaagt-aaaaaataatgtgagtatgagagagaaagttgtcacaaaagttatcccaaaatagatgttcaaatatcatttctc 41175777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 83 - 232
Target Start/End: Complemental strand, 9581723 - 9581575
Alignment:
Q  83 tgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaag 182  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||| |||| ||||| |||||||||||       | ||||||||| || ||||||||    
T  9581723 tgtgacaaccataatttacaaagaaaaagtaggtatttgcacggaaaccaaaacaatagagagataaagt-aaaaaataatgtgagtatgaaagagaaag 9581625  T
Q  183 ttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    ||||||||||| || ||||||||||||| ||||| |||||||| ||||||    
T  9581624 ttgtcacaaaagttatcactaaatggatgttcaaatatcatttttctaaa 9581575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 8675325 - 8675505
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | |||||||||| || || |||||||||||||||  |||||||||  |||||||||||| |||||||||||||| |||||    
T  8675325 agtgttatttgaacaaccatt-tggttgacaacttttgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaatcaaagcaatagagaga 8675423  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||       | ||||||||| |||||||||| ||||  ||||| || |||| |||||||| ||||| ||||||||||||    
T  8675424 taaagt-aaaaagtaatgtgagtatgagagagaaaattgttgcaaaagttatcacaaaatggatgttcaaatatcatttctct 8675505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 229
Target Start/End: Complemental strand, 5042431 - 5042247
Alignment:
Q  43 gagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaa 142  Q
    ||||||||||||||||||||||||| |||| || || || | ||||||||||| ||||  ||||||||   |||||| ||||||||| || || |||| |    
T  5042431 gagaagtgttatttgaacaatcaatttggt-gataacttatttgacaaccatattttacaaagaaaaaagtggtattggcacggaaaccatagtaataga 5042333  T
Q  143 gagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||||       | ||||||||| |||||| ||||||||  |||||||||||||||||||||| ||||| ||||||||||||    
T  5042332 gagataaagtaaaaaa-taatgtgagtatgagagataaagttgttgcaaaaattgtcactaaatggatgttcaaatatcatttctct 5042247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 188
Target Start/End: Complemental strand, 9226480 - 9226341
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| |||||||||| || ||||||||  ||||||||  ||||||||| | |||||||||||||||||||| ||||| |||||    
T  9226480 agtgttatttgaacaaccaatttggttgacaacttttgtgacaattataatttacaaagaaaaagtaagtatttgcacggaaatcaaaacaatagagaga 9226381  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtca 188  Q
    ||||||       | ||||||||| |||||||||||||||||    
T  9226380 taaagt--aaaaataatgtgagtatgagagagaaagttgtca 9226341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 46 - 229
Target Start/End: Original strand, 17402813 - 17402994
Alignment:
Q  46 aagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagag 145  Q
    ||||||||||||||||| |||| |||| ||||| || | |||| |||||||||||| ||||||||  |  ||||  ||||||||||| ||||||| ||||    
T  17402813 aagtgttatttgaacaaccaatttggt-gacaacttatttgactaccataatttataaagaaaaattaa-tattgacacggaaatcatagcaatagagag 17402910  T
Q  146 ataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||       | |||||  || |||| ||||||||||||||||||||||||| |||||||| ||||| ||||||||||||    
T  17402911 ataaagtaaaaatataatgtgtctatgagatagaaagttgtcacaaaaattgtcaccaaatggatgttcaaatatcatttctct 17402994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 41 - 229
Target Start/End: Original strand, 19481068 - 19481254
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| ||||||||||||||||||| | ||||||| || || || |||||| ||||||||  |||||||||  |||||||||||| | | |||| |||||    
T  19481068 aagaggagtgttatttgaacaatcatt-tggttgataacttttgggacaactataatttacaaagaaaaagttggtatttgcacgaagaccaaaacaata 19481166  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
     |||||||||||       | ||||||||| |||||||||||||||||||||| || |||  |||||||| ||||| ||||||||||||    
T  19481167 gagagataaagt-aaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttatcataaaatggatgttcaaatatcatttctct 19481254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 15952937 - 15953041
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | |||||||||| || ||||||||||||||||||  |||||||||  |||||||||||| |||||||||||||| |||||    
T  15952937 agtgttatttgaacaaccatt-tggttgacaacttatgtgacaaccataatttacaaagaaaaagtgggtatttgcacgaaaatcaaagcaatagagaga 15953035  T
Q  147 taaagt 152  Q
    ||||||    
T  15953036 taaagt 15953041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 229
Target Start/End: Original strand, 34888699 - 34888880
Alignment:
Q  46 aagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagag 145  Q
    |||||||||||||||||||||| | |||||||| || ||||| || |||||||||| ||||| ||  | ||||||| |||||||||||| ||||| ||||    
T  34888699 aagtgttatttgaacaatcaatttagttgacaacttttgtgaaaatcataatttataaagaataattatgtatttgtacggaaatcaaaacaatagagag 34888798  T
Q  146 ataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||       | ||||||||  || |||||||||||||| |||  |||||| ||||||||| ||||| ||| ||||||||    
T  34888799 ataaagt--aaaaataatgtgagtgtgaaagagaaagttgtcataaatgttgtcattaaatggatgttcaaatattatttctct 34888880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 42 - 228
Target Start/End: Complemental strand, 43441922 - 43441738
Alignment:
Q  42 agagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataa 141  Q
    |||| |||||||||||||||| || | |||||||||| || |  |||||||||||||||  ||||||||   |||||||||||| ||| ||||||||||     
T  43441922 agaggagtgttatttgaacaaccatt-tggttgacaacttttaagacaaccataatttacaaagaaaaaattggtatttgcacgaaaaccaaagcaatag 43441824  T
Q  142 agagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||||||||||       | ||||||||| |||||||||||||||  ||||| |||| || |||||||| ||||| |||||||||||    
T  43441823 agagataaagt-aaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgttacaaaatggatgttcaaatatcatttctc 43441738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 229
Target Start/End: Original strand, 19839879 - 19840058
Alignment:
Q  48 gtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagat 147  Q
    ||||||||||||||| | || ||||||| || || || |||||||||||||||  ||||||||   | |||||||||| ||| |||||||||| ||| ||    
T  19839879 gtgttatttgaacaa-ctatttggttgataacttttgggacaaccataatttacaaagaaaaaattgatatttgcacgaaaaccaaagcaatagagatat 19839977  T
Q  148 aaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||       | ||||||||| |||||||||||||||||||||||||||||  ||||| || ||||| ||||||||||||    
T  19839978 aaagtaaaaaa-taatgtgagtatgagagagaaagttgtcacaaaaattgtcataaaatgaatgttcaaatatcatttctct 19840058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 230
Target Start/End: Complemental strand, 30640931 - 30640788
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    |||||||||||||||| |||||| |  ||||||||| ||| |||||||||||||| |||||||||||       | |||| | || ||||||||||||||    
T  30640931 gacaaccataatttataaagaaagaataggtatttgtacgaaaatcaaagcaatagagagataaagtaaaaaa-taatgtaaatatgagagagaaagttg 30640833  T
Q  186 tcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    | |||||| ||||||| |||||||| ||||| |||||||||||||    
T  30640832 taacaaaagttgtcacaaaatggatgttcaaatatcatttctcta 30640788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 230
Target Start/End: Complemental strand, 20770272 - 20770128
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    ||||| |||||||||  ||||||||| |||||||  |||| |||||||||||||| |||||||||||       | ||||||||| ||||||||||||||    
T  20770272 gacaatcataatttacaaagaaaaagtaggtattgacacgaaaatcaaagcaatagagagataaagtaaaaaa-taatgtgagtatgagagagaaagttg 20770174  T
Q  186 tcacaaaaattgtc-actaaatggatcttcaagtatcatttctcta 230  Q
    |||||||| ||||| |  |||||||| ||||| |||||||||||||    
T  20770173 tcacaaaagttgtcaaaaaaatggattttcaaatatcatttctcta 20770128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 228
Target Start/End: Complemental strand, 6517835 - 6517712
Alignment:
Q  104 agaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcacta 203  Q
    ||||||||  |||||||||||| ||| |||||||||| |||||||||||       | ||||||||| |||||||||||||||||||||| ||||||  |    
T  6517835 agaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaag-taatgtgagtatgagagagaaagttgtcacaaaagttgtcataa 6517737  T
Q  204 aatggatcttcaagtatcatttctc 228  Q
    ||||||| ||||| |||||||||||    
T  6517736 aatggatgttcaaatatcatttctc 6517712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 37700601 - 37700459
Alignment:
Q  85 tgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagtt 184  Q
    ||||||||||||||||  ||||||||| || |||| ||||||||| || ||||||| |||||||| ||       | ||||||||| |||||||||||||    
T  37700601 tgacaaccataatttacaaagaaaaagtag-tattggcacggaaaccatagcaatagagagataaggtaaaaaa-taatgtgagtatgagagagaaagtt 37700504  T
Q  185 gtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
     |||||| ||||||||| |||||||| ||||| ||||||||||||    
T  37700503 atcacaataattgtcaccaaatggatgttcaaatatcatttctct 37700459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 8267825 - 8267894
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    ||||||||| |||||||||||||||  |||||||||||||||||||||| ||||| ||||||||||||||    
T  8267825 atgtgagtatgagagagaaagttgttgcaaaaattgtcactaaatggatgttcaaatatcatttctctaa 8267894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 3640112 - 3640233
Alignment:
Q  71 gttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagta 170  Q
    |||||||| || ||||||||||||||||||| |||||||||  |||||||||| | |||||||||||||| | |||||||||       | |||||||||    
T  3640112 gttgacaacttatgtgacaaccataatttataaagaaaaagtgggtatttgcatgaaaatcaaagcaatagaaagataaagt-aaaaaataatgtgagta 3640210  T
Q  171 cgagagagaaagttgtcacaaaa 193  Q
     |||||||||||||||| |||||    
T  3640211 tgagagagaaagttgtctcaaaa 3640233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 8920144 - 8920076
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||||| ||||| |||||||||||||    
T  8920144 atgtgagtatgagagagaaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttctcta 8920076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 48 - 232
Target Start/End: Complemental strand, 18695497 - 18695314
Alignment:
Q  48 gtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataa-tttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||| || | || | ||||| || | |||||||||||| ||||  ||| ||||| |||| || ||||| |||||||||||||| |||||    
T  18695497 gtgttatttgaacaaccatt-tgatagacaacttatttgacaaccataaatttacaaaggaaaagtaggttttagcacgaaaatcaaagcaatagagaga 18695399  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    ||||||       | ||||||||| |||||||||||||||||||||| |||| || |||||| | | ||| |||||||||||||||    
T  18695398 taaagtaaaaacat-atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctctaaa 18695314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 32912217 - 32912037
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | |||||||||| || || ||||| |||||||||| |||||||||  ||||||| |||| ||| |||| ||||| | | |    
T  32912217 agtgttatttgaacaaccatt-tggttgacaacttttgggacaatcataatttataaagaaaaagttggtatttacacgaaaaccaaaacaatagataaa 32912119  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||       | ||||||||| |||||||||| |||||||||||||| |||  ||||| || ||||| ||||||||||||    
T  32912118 taaagtaaaaag-taatgtgagtatgagagagaaaattgtcacaaaaattatcataaaatgaatgttcaaatatcatttctct 32912037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 229
Target Start/End: Original strand, 43213951 - 43214131
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | |||||||||| || |   ||||| ||||||||| ||||||||  ||||||||||||| ||| |||| |||||||||||    
T  43213951 agtgttatttgaacaaccatt-tggttgacaacttttaaaacaactataatttataaagaaaaaataggtatttgcacgaaaaccaaaacaataaagaga 43214049  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||       | ||||||||| ||| |||||| ||||||||||| ||||  | |||| ||| ||||| ||||||||||||    
T  43214050 taaagt-aaaaagtaatgtgagtatgagtgagaaaattgtcacaaaagttgttgcaaaatagatgttcaaatatcatttctct 43214131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 228
Target Start/End: Original strand, 6446410 - 6446589
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||| ||||||||||| |||| ||||||||||||| |   ||||||||||||||  || |||||  | ||||||| ||| |||  ||||||||| ||| |    
T  6446410 agtgatatttgaacaa-caatttggttgacaattttttgaacaaccataatttacaaaaaaaaaatatgtatttgtacgaaaacaaaagcaatagagaaa 6446508  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||       | ||||||||| |||||||||||||||||||||| ||||| | |||| ||||||||| |||||||||||    
T  6446509 taaagtaaaaag-taatgtgagtatgagagagaaagttgtcacaaaagttgtcgcaaaatagatcttcaaatatcatttctc 6446589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 228
Target Start/End: Original strand, 21064118 - 21064297
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||||||||| |||| ||||| || | ||||| ||||| ||||  ||||||||   ||||||  ||||||||||| | |||||  ||||    
T  21064118 agtgttatttgaacaatcaatttggt-gacaacttatttgacacccatattttacaaagaaaaaagtggtattgacacggaaatcataacaatagggaga 21064216  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||       | ||||||||| |||||||||||||||  ||||| ||||||||||||| || ||||| |||||||||||    
T  21064217 taaagtaaaaag-taatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatgaatgttcaaatatcatttctc 21064297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 228
Target Start/End: Complemental strand, 34124800 - 34124621
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | |  |||||||||| |  |||||||||||||||  |||||||||  ||||||| |||| ||| |||||||||| ||| |    
T  34124800 agtgttatttgaacaaccatt-taattgacaatttttaagacaaccataatttacaaagaaaaagttggtatttacacgaaaaccaaagcaatagagaaa 34124702  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||       | ||||||||| |||||||||| || ||||||||||| |||  |||||||| ||||| |||||||||||    
T  34124701 taaagtaaaaag-taatgtgagtatgagagagaaaattatcacaaaaattatcataaaatggatgttcaaatatcatttctc 34124621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 228
Target Start/End: Original strand, 35098897 - 35099076
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| |||| ||||| || | |||||| |||||||||  ||||||||   ||||||  ||||||||  | ||||||| |||||    
T  35098897 agtgttatttgaacaaccaatttggt-gacaacttatttgacaatcataatttacaaagaaaaaagtggtattgacacggaaactatagcaatagagaga 35098995  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||       | ||||||||| |||||||||||||||  ||||| |||||||||||| ||| ||||| |||||||||||    
T  35098996 taaagtaaaaaa-taatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatagatgttcaaatatcatttctc 35099076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 230
Target Start/End: Original strand, 38704083 - 38704270
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    |||||||||||||||||||||| || | || || |||| || || |||||||||||||||  |||||||||  |||||||||||| ||||||||||||||    
T  38704083 aagagaagtgttatttgaacaaccatt-tgattaacaacttttgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaatcaaagcaata 38704181  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
     | | |||||||       | ||||||||| || ||| ||| ||||  |||||||| |||  |||||||| ||||| |||||||||||||    
T  38704182 gaaaaataaagt-aaaaaataatgtgagtatgatagaaaaaattgttgcaaaaattatcataaaatggatgttcaaatatcatttctcta 38704270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 233
Target Start/End: Original strand, 6940042 - 6940226
Alignment:
Q  48 gtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataa-tttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||| || | || | ||||| || | |||||||||||| ||||  ||| ||||| |||| || ||||| |||||||||||||| |||||    
T  6940042 gtgttatttgaacaaccatt-tgatagacaacttatttgacaaccataaatttacaaaggaaaagtaggttttggcacgaaaatcaaagcaatagagaga 6940140  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaag 233  Q
    ||||||       | ||||||||| ||||||||||||||||||||||||| | |  |||||| | | ||| ||||||||||||||||    
T  6940141 taaagtaaaaacat-atgtgagtatgagagagaaagttgtcacaaaaattattataaaatggttgtacaaatatcatttctctaaag 6940226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 228
Target Start/End: Original strand, 18842249 - 18842392
Alignment:
Q  84 gtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagt 183  Q
    |||||||||||| ||||  ||||||||   |||||| ||||| ||| || ||||||| |||||||||||       | ||||||||| ||||||||||||    
T  18842249 gtgacaaccatattttacaaagaaaaaagtggtattggcacgaaaaccatagcaatagagagataaagtaaaaaa-taatgtgagtatgagagagaaagt 18842347  T
Q  184 tgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    |||  ||||| || ||||||||||||| ||||| |||||||||||    
T  18842348 tgttgcaaaagttatcactaaatggatgttcaaatatcatttctc 18842392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 21922150 - 21922216
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||||||||||||||  ||||||| |||||||| ||||| |||||||||||    
T  21922150 atgtgagtatgagagagaaagttgtcacaaacgttgtcacaaaatggatgttcaaatatcatttctc 21922216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 43196555 - 43196674
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttg 185  Q
    |||||||||||||| | |||||| |  | ||||||||||| |||||||||||||| |||||||||||       | ||||||||| |||| |||||||||    
T  43196555 gacaaccataatttgtaaagaaagaatacgtatttgcacgaaaatcaaagcaatagagagataaagt-aaaaaataatgtgagtatgagaaagaaagttg 43196653  T
Q  186 tcacaaaaattgtcactaaat 206  Q
    | |||||||||||||| ||||    
T  43196654 taacaaaaattgtcacaaaat 43196674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 229
Target Start/End: Original strand, 13089752 - 13089854
Alignment:
Q  127 aaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttc 226  Q
    |||||||||||||| |||||||||||       | ||||||||| || ||||||||||||||||||| ||||||  |||||| | ||||| |||||||||    
T  13089752 aaatcaaagcaatagagagataaagtagaatgataatgtgagtatgaaagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 13089851  T
Q  227 tct 229  Q
    |||    
T  13089852 tct 13089854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 34270506 - 34270402
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| || | |||||||||| || || |||||||||||||||  ||| ||||| ||||||||||||| ||| ||| |||| | |||||    
T  34270506 agtgttatttgaacaaccatt-tggttgacaaattttgagacaaccataatttacaaaggaaaagtaggtatttgcacgaaaaccaatgcaacagagaga 34270408  T
Q  147 taaagt 152  Q
    ||||||    
T  34270407 taaagt 34270402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 193
Target Start/End: Original strand, 1839238 - 1839381
Alignment:
Q  48 gtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagat 147  Q
    |||||||||||| || | || ||||||| ||||| || |||||||||||||||  ||||||||  || |||||||||| ||| |||| ||||| | ||||    
T  1839238 gtgttatttgaa-aagccatttggttgataatttatgggacaaccataatttacaaagaaaaaatagatatttgcacgaaaaccaaaacaatagaaagat 1839336  T
Q  148 aaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaa 193  Q
    |||||       | ||||||||| ||||||||||||||||||||||    
T  1839337 aaagt-aaaaaataatgtgagtatgagagagaaagttgtcacaaaa 1839381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 228
Target Start/End: Original strand, 4430828 - 4431007
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||| ||||||||||| |||| |||| ||||| || | |||||| |||| ||||  ||||||||   ||||||  |||| ||| || ||||||| |||||    
T  4430828 agtgctatttgaacaaccaatttggt-gacaacttatttgacaagcatactttacaaagaaaaaagtggtattgacacgaaaaccatagcaatagagaga 4430926  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||       | ||||||||| |||||| ||||||||  ||||| |||||||||||||||| ||||| |||||||||||    
T  4430927 taaagtaaaaaa-tgatgtgagtatgagagaaaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctc 4431007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 42267530 - 42267421
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    |||||||||||||||||||||| |||| | | |||||| || | ||||||||||||||||| |||||||| |  |||||  ||||||||||| | |||||    
T  42267530 aagagaagtgttatttgaacaaccaat-ttgatgacaacttatttgacaaccataatttataaagaaaaa-atagtattgacacggaaatcataacaata 42267433  T
Q  141 aagagataaagt 152  Q
     |||||||||||    
T  42267432 gagagataaagt 42267421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 152
Target Start/End: Complemental strand, 2224971 - 2224867
Alignment:
Q  46 aagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagag 145  Q
    ||||||||||||||||| |||| || | ||||| || | ||||||||||||||||  ||||||||| || |||| ||||||||| || || |||||||||    
T  2224971 aagtgttatttgaacaaccaatttgat-gacaacttatttgacaaccataatttacaaagaaaaagtag-tattggcacggaaaacatagtaataaagag 2224874  T
Q  146 ataaagt 152  Q
    |||||||    
T  2224873 ataaagt 2224867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 15008435 - 15008544
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    ||||||||||||||||||||||||  || |||||||||| || ||||||||  ||||||||  ||  ||||| || |||||||||| ||| |||| ||||    
T  15008435 aaagagaagtgttatttgaacaat-tatttggttgacaacttatgtgacaataataatttacaaaagaaaagtagatatttgcacgaaaaccaaaacaat 15008533  T
Q  140 aaagagataaa 150  Q
    | |||||||||    
T  15008534 agagagataaa 15008544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 15478837 - 15478733
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| | || ||||||||||||| ||  ||||||||||||||  |||||||||  | |||||||||| ||| |||| ||||  |||||    
T  15478837 agtgttatttgaacaa-ctatttggttgacaatttttggaacaaccataatttacaaagaaaaagttgatatttgcacgaaaaccaaaacaattgagaga 15478739  T
Q  147 taaagt 152  Q
    ||||||    
T  15478738 taaagt 15478733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 41173318 - 41173253
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttct 227  Q
    ||||||||| ||||||||||||||| |||||| ||||||| |||||||| || || ||||||||||    
T  41173318 atgtgagtatgagagagaaagttgttacaaaagttgtcacaaaatggatgtttaaatatcatttct 41173253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 9939324 - 9939483
Alignment:
Q  48 gtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataa-tttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    ||||||||||||||| || | || | |||||||| | |||||||||||| ||||  ||| ||||| |||| || ||||| |||||||||||||| |||||    
T  9939324 gtgttatttgaacaaccatt-tgatagacaatttatttgacaaccataaatttacaaaggaaaagtaggttttggcacgaaaatcaaagcaatagagaga 9939422  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatgg 208  Q
    ||||||        ||||||| || |||||||||| ||||||||||| |||| || ||||||    
T  9939423 taaagtaaaaaca-tatgtgaatatgagagagaaaattgtcacaaaacttgttacaaaatgg 9939483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 152
Target Start/End: Original strand, 10658989 - 10659099
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||||||||| || | || ||||||| || ||  |||||| |||||||| |||||||| | | |||||||||| ||| |||||||||    
T  10658989 aaagaggagtgttatttgaacaaccatt-tgattgacaacttttggcacaaccgtaatttataaagaaaaata-gatatttgcacgaaaaccaaagcaat 10659086  T
Q  140 aaagagataaagt 152  Q
    | |||||||||||    
T  10659087 agagagataaagt 10659099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 23126348 - 23126415
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| | |||||||| ||||  ||||| |||||||||||||||| ||||| ||||||||||||    
T  23126348 atgtgagtatgggagagaaaattgttgcaaaagttgtcactaaatggatgttcaaatatcatttctct 23126415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 4088509 - 4088439
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    ||||||||| || ||||||||||||||||||| |||| |  |||||||| | ||| |||||||||||||||    
T  4088509 atgtgagtatgaaagagaaagttgtcacaaaagttgttataaaatggatgtacaaatatcatttctctaaa 4088439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 12661953 - 12662018
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| ||||||||||||||||| |||||||||||| || ||||| | ||| |||||||||||    
T  12661953 atgtgagtatgagagagaaagttgtca-aaaaattgtcacaaagtggatgtacaaatatcatttctc 12662018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 15267840 - 15267783
Alignment:
Q  172 gagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||||||||||||  ||||| |||||||||||||||| || || ||||||||||||    
T  15267840 gagagagaaagttgttgcaaaagttgtcactaaatggatgttaaaatatcatttctct 15267783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 199
Target Start/End: Original strand, 16437450 - 16437607
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| |||| ||| ||||||||| | |||||| |||| ||||  ||||||||   |||||| ||||||||| || |  ||||    
T  16437450 aagaggagtgttatttgaacaaccaatttgg-tgacaatttatttgacaatcatactttacaaagaaaaaagtggtattggcacggaaaccatatgaata 16437548  T
Q  141 aagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtc 199  Q
     |||||||| ||       | ||||||||| |||||||||||||||  ||||| |||||    
T  16437549 gagagataaggtaaaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtc 16437607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 150
Target Start/End: Original strand, 18397059 - 18397159
Alignment:
Q  49 tgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagata 148  Q
    ||||||||||||||| | | ||||||| ||||| ||  ||||  ||||||||  ||||||||  ||||||||||||| ||| |||||||||| |||||||    
T  18397059 tgttatttgaacaattatt-tggttgataatttttggaacaattataatttacaaagaaaaaataggtatttgcacgaaaaccaaagcaatagagagata 18397157  T
Q  149 aa 150  Q
    ||    
T  18397158 aa 18397159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 4771638 - 4771574
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaa 150  Q
    |||||||||||||||| |||||| |  | ||||||||||  |||||||||||||| |||||||||    
T  4771638 gacaaccataatttataaagaaagaatatgtatttgcacaaaaatcaaagcaatagagagataaa 4771574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 232
Target Start/End: Complemental strand, 33037620 - 33037516
Alignment:
Q  127 aaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttc 226  Q
    |||||||||||||| ||||| |||||       | ||||||||| ||||||||||||||||| |||| |||| |  |||||| | ||||| |||||||||    
T  33037620 aaatcaaagcaatagagagaaaaagtaaaaagataatgtgagtatgagagagaaagttgtcataaaagttgt-aaaaaatggttgttcaaatatcatttc 33037522  T
Q  227 tctaaa 232  Q
    ||||||    
T  33037521 tctaaa 33037516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 35473379 - 35473323
Alignment:
Q  172 gagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||||||||||||||||||| |||  |||| ||| ||||| |||||||||||    
T  35473379 gagagagaaagttgtcacaaaaattatcataaaatagatattcaaatatcatttctc 35473323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 36548386 - 36548461
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaagtaaat 238  Q
    ||||||||| |||||||||||||||||  ||| ||||||| |||||| | | ||| ||||||||||||||| |||||    
T  36548386 atgtgagtatgagagagaaagttgtca-gaaagttgtcacaaaatggttatacaaatatcatttctctaaaataaat 36548461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 6241687 - 6241624
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcattt 225  Q
    ||||||||| |||||| |||||||||| |||||||||||| ||||  || ||||| ||||||||    
T  6241687 atgtgagtatgagagataaagttgtcataaaaattgtcacaaaataaatgttcaaatatcattt 6241624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 9977185 - 9977118
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| ||  |||||| ||||  ||||| |||||||||||||||| ||||| ||||||||||||    
T  9977185 atgtgagtatgattgagaaaattgttgcaaaagttgtcactaaatggatgttcaaatatcatttctct 9977118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 26660417 - 26660483
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| ||||||||||||||||| | || ||||||| |||||||| | ||| ||||||||||||    
T  26660417 atgtgagtatgagagagaaagttgtca-agaagttgtcacaaaatggatgtacaaatatcatttctct 26660483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 26932009 - 26932075
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| ||||||||||||||||| | || ||||||| |||||||| | ||| ||||||||||||    
T  26932009 atgtgagtatgagagagaaagttgtca-agaagttgtcacaaaatggatgtacaaatatcatttctct 26932075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 611930 - 611892
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtca 200  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  611930 atgtgagtatgagagagaaagttgtcacaaaagttgtca 611892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 196
Target Start/End: Complemental strand, 11954497 - 11954463
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaatt 196  Q
    ||||||||| |||||||||||||||||||||||||    
T  11954497 atgtgagtatgagagagaaagttgtcacaaaaatt 11954463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 196
Target Start/End: Complemental strand, 14532570 - 14532536
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaatt 196  Q
    ||||||||| |||||||||||||||||||||||||    
T  14532570 atgtgagtatgagagagaaagttgtcacaaaaatt 14532536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 17097807 - 17097877
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    ||||||||| |||| ||||| ||||||||||| || |||  |||||| | ||||| |||||||||||||||    
T  17097807 atgtgagtatgagatagaaaattgtcacaaaagttatcaaaaaatggttgttcaaatatcatttctctaaa 17097877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 21156053 - 21155987
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| || |||||||| |||||||||| ||||||  |||||| | ||||| |||||||||||    
T  21156053 atgtgagtatgaaagagaaaggtgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 21155987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 22098321 - 22098255
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||||||||||||||| |||| |  |||||| | | ||| |||||||||||    
T  22098321 atgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctc 22098255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 22649667 - 22649732
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| |||||||||| |||||||||||||||| |  |||||| | ||||| |||||||||||    
T  22649667 atgtgagtatgagagagaaaattgtcacaaaaattgt-aaaaaatggttgttcaaatatcatttctc 22649732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 25871451 - 25871517
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||| | |||||||||| || |  ||||||||||||| |||||||| ||||| |||||||||||    
T  25871451 atgtgagcatgagagagaaaattatagcaaaaattgtcacaaaatggatgttcaaatatcatttctc 25871517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 33243745 - 33243810
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| | ||||||||||||||| |||||||||||| |||||| | | ||| |||||||||||    
T  33243745 atgtgagtatgcgagagaaagttgtcaaaaaaattgtcac-aaatggttatacaaatatcatttctc 33243810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 33620669 - 33620607
Alignment:
Q  167 agtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||| |||||| ||| ||||  ||||| |||||||||||||||| ||||| ||||||||||||    
T  33620669 agtatgagagaaaaaattgttgcaaaagttgtcactaaatggatattcaaatatcatttctct 33620607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 14323974 - 14324042
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    ||||||| | ||||||||||||||||| | || ||||||| |||||||| | ||| ||||||||||||||    
T  14323974 atgtgagcatgagagagaaagttgtca-agaagttgtcacaaaatggatgtgcaaatatcatttctctaa 14324042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 18660822 - 18660758
Alignment:
Q  164 gtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||| |||||||||| ||||||||||| ||||||  |||||| | ||||| ||||||||||||    
T  18660822 gtgagtatgagagagaaaattgtcacaaaagttgtca-aaaatggttgttcaaatatcatttctct 18660758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 42446296 - 42446365
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaa 231  Q
    ||||||||| |||||||||||||||  ||||| ||||||  |||| | | ||||| ||||||||||||||    
T  42446296 atgtgagtaagagagagaaagttgttgcaaaagttgtcaaaaaatagttgttcaaatatcatttctctaa 42446365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 1079958 - 1079994
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    |||||| || |||||||||||||||||||||||||||    
T  1079958 atgtgaatatgagagagaaagttgtcacaaaaattgt 1079994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 152
Target Start/End: Original strand, 2688871 - 2688982
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| | |||||||||||||| |||| |||| ||||| || | ||||||| ||| ||||  ||||||||    ||||| ||||||||| || ||||||    
T  2688871 aaagaggattgttatttgaacaaccaatttggt-gacaaattatttgacaactatattttacaaagaaaaaagttgtattggcacggaaaccatagcaat 2688969  T
Q  140 aaagagataaagt 152  Q
    | |||||||||||    
T  2688970 agagagataaagt 2688982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 6758796 - 6758832
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    |||||||||  ||||||||||||||||||||||||||    
T  6758796 atgtgagtataagagagaaagttgtcacaaaaattgt 6758832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 6865791 - 6865823
Alignment:
Q  160 ttatgtgagtacgagagagaaagttgtcacaaa 192  Q
    ||||||||||| |||||||||||||||||||||    
T  6865791 ttatgtgagtatgagagagaaagttgtcacaaa 6865823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 9594543 - 9594476
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||| ||||||||||||||| |||||| ||||||| || ||| | | ||| |||||||||||||    
T  9594543 atgtgagtatgagagagaaagttgt-acaaaagttgtcacaaattggttgtacaaatatcatttctcta 9594476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 13309948 - 13309880
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    |||||| || ||||||||||||| |||||||||||||||  |||| | | ||||| |||||||| ||||    
T  13309948 atgtgaatatgagagagaaagttatcacaaaaattgtcaaaaaatagttgttcaaatatcatttttcta 13309880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 38293364 - 38293400
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| || ||||||||||||||||||||||||    
T  38293364 atgtgagtatgatagagaaagttgtcacaaaaattgt 38293400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 38501005 - 38500942
Alignment:
Q  165 tgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    |||||| || |||||||||||||| |||||||||||| |||||| | | ||| ||||||||||||    
T  38501005 tgagtatgaaagagaaagttgtca-aaaaattgtcacaaaatggttgtacaaatatcatttctct 38500942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 41321320 - 41321284
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgt 198  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  41321320 atgtgagtatgagaaagaaagttgtcacaaaaattgt 41321284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 40 - 228
Target Start/End: Complemental strand, 11150 - 10964
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||||||||| |  | |||||||||| || |||||||| |||||||||  |||||||||  |||||||||||| |||||||| ||||    
T  11150 aaagaggagtgttatttgaacaaccttt-tggttgacaacttatgtgacaatcataatttacaaagaaaaagtgggtatttgcacgaaaatcaaaacaat 11052  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    | |||||||||||       | ||||||||| |||||||||||||||||||||| ||||| | |||||||| ||||| |||||||||||    
T  11051 agagagataaagt-aaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgtcccaaaatggatgttcaaatatcatttctc 10964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 77 - 228
Target Start/End: Complemental strand, 41905 - 41755
Alignment:
Q  77 aatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagtnnnnnnnttatgtgagtacgagag 176  Q
    |||||||| ||||||||||| |||| ||||||| |||| |||||||||| |||||||||||||| ||| |||||||       ||||||||| | |||||    
T  41905 aatttgtgcgacaaccataaattataaagaaaaggaagatatttgcacgaaaatcaaagcaatagagaaataaagtaaaaaa-ttatgtgagaatgagag 41807  T
Q  177 agaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||||||||||||||||||| ||||| || ||||||||| |||||||    
T  41806 agaaagttgtcacaaaaattgtcaccaaatgaatgttcaagtattatttctc 41755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 232
Target Start/End: Complemental strand, 38611 - 38421
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||||||||| || | | |||||||| || || |||||| ||||||||  |||||||||  |||||| ||||| ||| |||||||||    
T  38611 aaagaggagtgttatttgaacaaccatt-tagttgacaacttttgggacaactataatttacaaagaaaaagttggtattcgcacgaaaaccaaagcaat 38513  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctctaaa 232  Q
    | |||||||||||       | | ||||||| |||| ||||||||||||||||| ||||||  ||||| || ||||| ||| |||||||||||    
T  38512 agagagataaagt-aaaaagtaacgtgagtatgagaaagaaagttgtcacaaaagttgtcataaaatgaatgttcaaatattatttctctaaa 38421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 19702 - 19634
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||| |||||||||||||||  ||||| |||||||||||||||| ||||| |||||||||||||    
T  19702 atgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctcta 19634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 229
Target Start/End: Complemental strand, 193 - 6
Alignment:
Q  40 aaagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaat 139  Q
    |||||| |||||||||||||||| |||| ||| |||||| || | ||||||||||| ||||  ||||||||   |||||| ||||| ||| || | ||||    
T  193 aaagaggagtgttatttgaacaaccaatttgg-tgacaacttatttgacaaccatattttacaaagaaaaaagtggtattggcacgaaaaccataacaat 95  T
Q  140 aaagagataaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    | |||||||||||       | ||||||||| || ||||||| ||||  ||||| || ||||||||||||| ||||| ||||||||||||    
T  94 agagagataaagt-aaaaagtaatgtgagtatgaaagagaaaattgttgcaaaagttttcactaaatggatgttcaaatatcatttctct 6  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 12117 - 12007
Alignment:
Q  41 aagagaagtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaata 140  Q
    ||||| |||||||||||||||| | || |||||||||| || || |||||||||||||||  |||||||||  ||||| |||||| ||| |||| |||||    
T  12117 aagaggagtgttatttgaacaa-ctatttggttgacaacttttgcgacaaccataatttacaaagaaaaagttggtatgtgcacgaaaaccaaaacaata 12019  T
Q  141 aagagataaagt 152  Q
     |||||||||||    
T  12018 gagagataaagt 12007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 228
Target Start/End: Complemental strand, 9382 - 9203
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagaga 146  Q
    |||||||||||||||| |||| || |  |||| || | ||||||||||| ||||| ||||||||   |||||| |||||||||| | ||||||| |||||    
T  9382 agtgttatttgaacaaccaatttgatc-acaacttatttgacaaccatattttataaagaaaaaagtggtattggcacggaaattatagcaatagagaga 9284  T
Q  147 taaagtnnnnnnnttatgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||       | || ||||||  ||||||||||||||  ||||| |||||| ||||| ||| ||||| |||||||||||    
T  9283 taaagt-aaaaagtaatatgagtataagagagaaagttgtttcaaaagttgtcattaaatagatgttcaaatatcatttctc 9203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1956 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1956
Description:

Target: scaffold1956; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 825 - 769
Alignment:
Q  174 gagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||||||||||||||||| |||  |||||||| ||||| |||||||||||||    
T  825 gagagaaagttgtcacaaaaattatcaaaaaatggatgttcaaatatcatttctcta 769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 72064 - 72120
Alignment:
Q  174 gagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    |||||||||||||  ||||||||||||| |||||||| ||||| |||||||||||||    
T  72064 gagagaaagttgtagcaaaaattgtcacaaaatggatattcaaatatcatttctcta 72120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 71977 - 72043
Alignment:
Q  86 gacaaccataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagt 152  Q
    ||||| |||||||||| ||||||||  |||||||| |||  |||||||||||||| | |||||||||    
T  71977 gacaatcataatttataaagaaaaaataggtatttacactaaaatcaaagcaatagaaagataaagt 72043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 27404 - 27338
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| ||||||||||||||||| |||||||||||| |||||||| | ||  ||||||||||||    
T  27404 atgtgagtatgagagagaaagttgtca-aaaaattgtcacaaaatggatgtacatatatcatttctct 27338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 11002 - 10935
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| |||||||||||||||||||||| ||||||  || ||| | ||||| ||||||||||||    
T  11002 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaattatcatttctct 10935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 101911 - 101978
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctct 229  Q
    ||||||||| |||||||||||||||||||||| ||||||  |||||| | ||||  ||||||||||||    
T  101911 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcagatatcatttctct 101978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 223484 - 223550
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| || | |||||||||| |||||| ||||||| |||||||| ||||| |||||||||||    
T  223484 atgtgagtatgaaatagaaagttgtaacaaaagttgtcacaaaatggatattcaaatatcatttctc 223550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 201
Target Start/End: Original strand, 34799 - 34838
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcac 201  Q
    ||||||||| ||||||||||||||||| ||||||||||||    
T  34799 atgtgagtatgagagagaaagttgtcataaaaattgtcac 34838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 2377 - 2272
Alignment:
Q  47 agtgttatttgaacaatcaatctggttgacaatttgtgtgacaaccataatttatcaagaaaa-agaaggtatttgcacggaaatcaaagcaataaagag 145  Q
    ||||||||||||||||||||| ||| |||||| || | |||||| |||| ||||| || |||| | | ||||||  |||||||| || ||||||| ||||    
T  2377 agtgttatttgaacaatcaatatgg-tgacaacttatttgacaatcatactttataaaaaaaataaatggtattgacacggaaaccatagcaatagagag 2279  T
Q  146 ataaagt 152  Q
    |||||||    
T  2278 ataaagt 2272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 8538 - 8472
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctc 228  Q
    ||||||||| ||||||||||||||||| ||||||||| |  |||||  | ||||| |||||||||||    
T  8538 atgtgagtatgagagagaaagttgtcataaaaattgttaaaaaatgattgttcaaatatcatttctc 8472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 16399 - 16337
Alignment:
Q  90 accataatttatcaagaaaaagaaggtatttgcacggaaatcaaagcaataaagagataaagt 152  Q
    ||||||||||   |||||| | || ||||||||||| |||||||||||| |||||||||||||    
T  16399 accataatttgcgaagaaagaaaatgtatttgcacgaaaatcaaagcaagaaagagataaagt 16337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 4852 - 4919
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||| ||||||||||||||| |||||||||||  | |||||| | | ||| |||||||||||||    
T  4852 atgtgagtatgagagagaaagttgt-acaaaaattgtaccaaaatggttgtacaaatatcatttctcta 4919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 6525 - 6593
Alignment:
Q  162 atgtgagtacgagagagaaagttgtcacaaaaattgtcactaaatggatcttcaagtatcatttctcta 230  Q
    ||||||||| |||||| ||||||||||||||| |||| |  |||||  | ||||| |||||||||||||    
T  6525 atgtgagtatgagagataaagttgtcacaaaagttgttaaaaaatgattgttcaaatatcatttctcta 6593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University