View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1268_2D_high_12 (Length: 207)
Name: NF1268_2D_high_12
Description: NF1268_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1268_2D_high_12 |
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Alignment Details
Target: chr4 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 4673907 - 4673733
Alignment:
| Q |
16 |
caaaccaaagattatccataatcatcaattcatcaccaccacatcaaatacaacactatcactcatcccaaattcaaaaactcacaaacaacactctatt |
115 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4673907 |
caaaccaaagattatccataatcaccaattcatcaccaccacatcaaatacaacactatcactcatcccaaattcaaaaactcacaaacaacactctatt |
4673808 |
T |
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| Q |
116 |
ttctactctcaccaccctgctcacattagcacaaatcaaatggccgccgcaaccgccaccgctgcagccacttct |
190 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4673807 |
ttctactctcaccaccctgctcacattagcacaaatcaaatggccgccgcaaccgccaccgctgcagccacttct |
4673733 |
T |
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