View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12691_high_5 (Length: 249)
Name: NF12691_high_5
Description: NF12691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12691_high_5 |
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Alignment Details
Target: chr6 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 65 - 239
Target Start/End: Complemental strand, 13878282 - 13878108
Alignment:
| Q |
65 |
cagtgtattgaaatattaatacacattattttcattgaatcatcaatgcacttatttctattctgtaataaataaatcttcttagtattgagataatgtt |
164 |
Q |
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| T |
13878282 |
cagtgtattgaaatattaatgcacattattttcattgaatcatcaatgcacttatttctattctgtaataaataaatcttcttagtattgagataatgtt |
13878183 |
T |
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| Q |
165 |
ttttgtacaacttattctgagaccagtaccttaattgttcatttaatcatctcagaaattcttttattccttcat |
239 |
Q |
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| T |
13878182 |
ttttgtacaactgattctgagaccagtaccttaattgttcatttaatcatctcagaaattcttttattccttcat |
13878108 |
T |
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