View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12691_high_9 (Length: 208)
Name: NF12691_high_9
Description: NF12691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12691_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 17 - 192
Target Start/End: Original strand, 7943832 - 7943997
Alignment:
| Q |
17 |
aggggctgaagatggagtttggctggagggaggatttggatatgtttggattttagatgtaaccatcaccattccattaaactggggtaaggtaaggtaa |
116 |
Q |
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| T |
7943832 |
aggggctgaagatggagtttggctggagggaggatttggatatgtttggattttagatgtaaccatcaccattccattaaactgg----------ggtaa |
7943921 |
T |
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| Q |
117 |
ggtaaggtatgctatactatattctagatatctttcttataagattttattaaaaataattgtatctattttttat |
192 |
Q |
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|||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
7943922 |
ggtaaggtatgctatactatattccagatatctttgttataagattttattaaaaataattgtatctattttttat |
7943997 |
T |
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