View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12691_low_5 (Length: 267)

Name: NF12691_low_5
Description: NF12691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12691_low_5
NF12691_low_5
[»] chr3 (55 HSPs)
chr3 (115-220)||(42879498-42879603)
chr3 (115-220)||(39131735-39131840)
chr3 (116-220)||(48073718-48073822)
chr3 (118-220)||(42164154-42164256)
chr3 (115-220)||(43862374-43862479)
chr3 (115-205)||(36471606-36471693)
chr3 (115-165)||(41889524-41889574)
chr3 (115-165)||(42167435-42167485)
chr3 (115-165)||(42877186-42877236)
chr3 (163-220)||(43358523-43358581)
chr3 (166-220)||(50937452-50937506)
chr3 (138-220)||(36465842-36465928)
chr3 (115-163)||(41888755-41888803)
chr3 (123-165)||(2229273-2229315)
chr3 (166-220)||(22978865-22978919)
chr3 (166-220)||(42878649-42878703)
chr3 (166-216)||(43861547-43861597)
chr3 (115-165)||(48071922-48071972)
chr3 (115-165)||(50938340-50938390)
chr3 (1-37)||(2229402-2229438)
chr3 (168-220)||(39130891-39130943)
chr3 (1-37)||(39132385-39132421)
chr3 (1-37)||(41889651-41889687)
chr3 (1-37)||(42163376-42163412)
chr3 (1-37)||(43357933-43357969)
chr3 (1-37)||(50935544-50935580)
chr3 (1-37)||(50938466-50938502)
chr3 (118-165)||(43860675-43860722)
chr3 (166-220)||(2228419-2228473)
chr3 (166-216)||(22979723-22979773)
chr3 (130-168)||(32001045-32001083)
chr3 (166-216)||(50936601-50936651)
chr3 (130-168)||(55136449-55136487)
chr3 (133-166)||(7041694-7041727)
chr3 (163-220)||(48072877-48072934)
chr3 (1-33)||(6489004-6489036)
chr3 (115-151)||(22732523-22732559)
chr3 (1-33)||(22977911-22977943)
chr3 (1-33)||(43359515-43359547)
chr3 (1-37)||(43863120-43863156)
chr3 (1-33)||(55136584-55136616)
chr3 (115-154)||(22731626-22731665)
chr3 (115-158)||(22978024-22978067)
chr3 (118-165)||(39129249-39129296)
chr3 (123-165)||(43359385-43359427)
chr3 (1-31)||(54410650-54410680)
chr3 (1-31)||(55135278-55135308)
chr3 (1-34)||(7041652-7041685)
chr3 (8-37)||(42880185-42880214)
chr3 (115-152)||(54409563-54409600)
chr3 (1-33)||(10825831-10825863)
chr3 (1-33)||(22428973-22429005)
chr3 (1-37)||(41888642-41888678)
chr3 (1-33)||(42877072-42877104)
chr3 (4-36)||(53778401-53778433)
[»] chr7 (51 HSPs)
chr7 (115-220)||(1599604-1599709)
chr7 (115-220)||(43543184-43543289)
chr7 (115-220)||(38229553-38229658)
chr7 (115-220)||(47254525-47254630)
chr7 (115-220)||(41407942-41408047)
chr7 (129-196)||(46160567-46160634)
chr7 (166-220)||(595344-595398)
chr7 (166-220)||(1600512-1600566)
chr7 (166-220)||(43544082-43544136)
chr7 (115-165)||(43544999-43545049)
chr7 (116-165)||(41406135-41406184)
chr7 (115-161)||(596213-596259)
chr7 (166-220)||(33980617-33980671)
chr7 (166-216)||(33981474-33981524)
chr7 (115-165)||(37708194-37708244)
chr7 (166-220)||(38226274-38226328)
chr7 (163-220)||(585070-585127)
chr7 (116-165)||(38224535-38224584)
chr7 (115-218)||(19064114-19064211)
chr7 (1-37)||(37708321-37708357)
chr7 (1-37)||(38224421-38224457)
chr7 (1-37)||(38229725-38229761)
chr7 (1-37)||(41406022-41406058)
chr7 (168-220)||(47253692-47253744)
chr7 (115-165)||(33982418-33982468)
chr7 (130-168)||(37623981-37624019)
chr7 (166-220)||(41407823-41407877)
chr7 (115-165)||(42825801-42825851)
chr7 (166-220)||(42832035-42832089)
chr7 (115-165)||(42833827-42833877)
chr7 (167-220)||(46159693-46159746)
chr7 (1-34)||(47254710-47254743)
chr7 (1-33)||(586122-586154)
chr7 (1-37)||(596335-596371)
chr7 (1-33)||(8391523-8391555)
chr7 (1-37)||(19233731-19233767)
chr7 (1-37)||(33979446-33979482)
chr7 (130-162)||(33979577-33979609)
chr7 (1-37)||(33982551-33982587)
chr7 (1-37)||(43542601-43542637)
chr7 (4-37)||(584786-584819)
chr7 (129-158)||(585998-586027)
chr7 (124-165)||(1602229-1602270)
chr7 (4-37)||(41408124-41408157)
chr7 (1-34)||(42833966-42833999)
chr7 (1-33)||(1602359-1602391)
chr7 (1-33)||(8393381-8393413)
chr7 (1-33)||(19063989-19064021)
chr7 (1-33)||(46160689-46160721)
chr7 (1-33)||(46934312-46934344)
chr7 (129-165)||(47252177-47252213)
[»] chr4 (65 HSPs)
chr4 (118-220)||(7111745-7111847)
chr4 (115-220)||(43938390-43938494)
chr4 (115-220)||(8080974-8081079)
chr4 (119-220)||(30112857-30112958)
chr4 (117-220)||(31623365-31623468)
chr4 (115-220)||(26918319-26918424)
chr4 (115-220)||(51943461-51943565)
chr4 (115-205)||(40846583-40846673)
chr4 (115-186)||(43594093-43594161)
chr4 (115-165)||(49645971-49646021)
chr4 (166-220)||(10657016-10657070)
chr4 (115-165)||(10658986-10659036)
chr4 (166-220)||(10871161-10871215)
chr4 (115-165)||(10873131-10873181)
chr4 (115-165)||(24577739-24577789)
chr4 (166-220)||(43939295-43939349)
chr4 (115-157)||(48952976-48953018)
chr4 (115-165)||(50790770-50790820)
chr4 (166-220)||(50791636-50791690)
chr4 (115-165)||(50792519-50792569)
chr4 (163-220)||(8079608-8079665)
chr4 (115-168)||(47650663-47650716)
chr4 (1-37)||(7111132-7111168)
chr4 (1-37)||(8081156-8081192)
chr4 (1-37)||(8840303-8840339)
chr4 (1-37)||(19869791-19869827)
chr4 (1-37)||(19871190-19871226)
chr4 (1-37)||(24577869-24577905)
chr4 (1-37)||(26917716-26917752)
chr4 (1-37)||(40846750-40846786)
chr4 (1-37)||(43594749-43594785)
chr4 (1-37)||(43940335-43940371)
chr4 (1-37)||(51940929-51940965)
chr4 (1-37)||(51943641-51943677)
chr4 (118-165)||(31624501-31624548)
chr4 (166-220)||(26919211-26919265)
chr4 (115-165)||(43590480-43590530)
chr4 (166-220)||(51942613-51942667)
chr4 (1-37)||(10659115-10659151)
chr4 (1-37)||(10873260-10873296)
chr4 (129-165)||(19871076-19871112)
chr4 (1-37)||(30112242-30112278)
chr4 (1-33)||(30114349-30114381)
chr4 (1-33)||(31309496-31309528)
chr4 (1-37)||(38623568-38623604)
chr4 (1-37)||(43937842-43937878)
chr4 (125-165)||(43940204-43940244)
chr4 (1-37)||(49645859-49645895)
chr4 (172-220)||(49646901-49646949)
chr4 (1-33)||(49649337-49649369)
chr4 (1-37)||(50790657-50790693)
chr4 (129-165)||(51941063-51941099)
chr4 (115-158)||(38623448-38623491)
chr4 (166-220)||(10657870-10657924)
chr4 (166-220)||(10872015-10872069)
chr4 (115-157)||(19869906-19869948)
chr4 (115-165)||(26923642-26923692)
chr4 (170-220)||(49647737-49647787)
chr4 (1-33)||(3035892-3035924)
chr4 (1-33)||(7113814-7113846)
chr4 (1-33)||(13861882-13861914)
chr4 (1-33)||(26923773-26923805)
chr4 (1-37)||(31624631-31624667)
chr4 (1-33)||(47649484-47649516)
chr4 (1-37)||(50792655-50792691)
[»] chr5 (31 HSPs)
chr5 (115-220)||(37250366-37250471)
chr5 (118-220)||(8525571-8525673)
chr5 (115-220)||(29640232-29640337)
chr5 (115-220)||(5100425-5100530)
chr5 (115-220)||(34858466-34858571)
chr5 (115-220)||(29639520-29639625)
chr5 (115-220)||(3035688-3035793)
chr5 (166-220)||(3034866-3034920)
chr5 (166-220)||(15525199-15525253)
chr5 (115-163)||(29389171-29389219)
chr5 (115-158)||(29390804-29390847)
chr5 (115-165)||(8520443-8520493)
chr5 (115-165)||(37256212-37256262)
chr5 (1-37)||(15524195-15524231)
chr5 (1-37)||(15527228-15527264)
chr5 (1-37)||(37256339-37256375)
chr5 (165-220)||(34859385-34859440)
chr5 (166-213)||(37252535-37252582)
chr5 (1-37)||(3036361-3036397)
chr5 (1-33)||(8526247-8526279)
chr5 (1-33)||(11078391-11078423)
chr5 (1-37)||(37249740-37249776)
chr5 (166-205)||(15526072-15526111)
chr5 (7-37)||(5100316-5100346)
chr5 (166-220)||(5101265-5101319)
chr5 (166-220)||(8524723-8524777)
chr5 (131-168)||(6719689-6719726)
chr5 (1-37)||(29639407-29639444)
chr5 (1-33)||(824928-824960)
chr5 (1-33)||(5102941-5102973)
chr5 (1-33)||(11076874-11076906)
[»] chr2 (51 HSPs)
chr2 (118-220)||(39160045-39160147)
chr2 (118-220)||(39209047-39209149)
chr2 (115-220)||(18248429-18248534)
chr2 (166-220)||(14453983-14454037)
chr2 (115-165)||(18246637-18246687)
chr2 (115-165)||(24520321-24520371)
chr2 (166-220)||(36601883-36601937)
chr2 (115-165)||(36602835-36602885)
chr2 (115-164)||(6319483-6319532)
chr2 (115-218)||(21191617-21191714)
chr2 (166-220)||(6320369-6320423)
chr2 (115-165)||(6322243-6322293)
chr2 (115-165)||(14454465-14454515)
chr2 (166-220)||(18247552-18247606)
chr2 (115-157)||(33182680-33182722)
chr2 (1-37)||(6319369-6319405)
chr2 (1-37)||(18248613-18248649)
chr2 (1-37)||(33182798-33182834)
chr2 (1-37)||(39159928-39159964)
chr2 (1-37)||(39209230-39209266)
chr2 (1-37)||(39879923-39879959)
chr2 (1-36)||(14454594-14454629)
chr2 (166-220)||(6321219-6321273)
chr2 (130-168)||(20919764-20919802)
chr2 (130-168)||(27478954-27478992)
chr2 (166-220)||(33179799-33179853)
chr2 (166-220)||(33180659-33180713)
chr2 (115-157)||(36600883-36600925)
chr2 (116-154)||(40495328-40495366)
chr2 (4-37)||(14452138-14452171)
chr2 (1-33)||(6644621-6644653)
chr2 (1-33)||(18246522-18246554)
chr2 (116-168)||(24460615-24460667)
chr2 (1-33)||(27479094-27479126)
chr2 (1-37)||(33178791-33178827)
chr2 (115-158)||(33178907-33178950)
chr2 (1-31)||(20919177-20919207)
chr2 (1-31)||(27477792-27477822)
chr2 (115-165)||(38932341-38932391)
chr2 (115-168)||(518238-518291)
chr2 (1-34)||(6322373-6322406)
chr2 (4-33)||(6647235-6647264)
chr2 (131-164)||(14452263-14452296)
chr2 (1-37)||(20919895-20919932)
chr2 (4-33)||(21178504-21178533)
chr2 (1-33)||(1054805-1054837)
chr2 (1-33)||(3851770-3851802)
chr2 (1-33)||(21191805-21191837)
chr2 (1-33)||(24460749-24460781)
chr2 (1-37)||(36602961-36602997)
chr2 (1-33)||(42080843-42080875)
[»] scaffold0014 (4 HSPs)
scaffold0014 (123-220)||(69684-69781)
scaffold0014 (115-165)||(71655-71705)
scaffold0014 (1-33)||(69530-69562)
scaffold0014 (1-33)||(71786-71818)
[»] scaffold0217 (3 HSPs)
scaffold0217 (115-206)||(850-941)
scaffold0217 (166-220)||(20354-20408)
scaffold0217 (4-37)||(1490-1523)
[»] chr8 (43 HSPs)
chr8 (115-216)||(31640303-31640404)
chr8 (115-216)||(41671263-41671364)
chr8 (166-220)||(35021145-35021199)
chr8 (166-220)||(38362732-38362786)
chr8 (160-220)||(26920358-26920418)
chr8 (115-165)||(19143025-19143075)
chr8 (115-165)||(35019433-35019483)
chr8 (166-220)||(38363586-38363640)
chr8 (166-220)||(41670446-41670500)
chr8 (115-168)||(39069028-39069081)
chr8 (1-37)||(19143154-19143190)
chr8 (1-37)||(29725572-29725608)
chr8 (1-37)||(38362498-38362534)
chr8 (1-37)||(38364705-38364741)
chr8 (1-37)||(41671434-41671470)
chr8 (115-166)||(23625855-23625906)
chr8 (115-165)||(15825739-15825789)
chr8 (166-220)||(19142078-19142132)
chr8 (115-153)||(26920411-26920449)
chr8 (123-165)||(31642852-31642894)
chr8 (166-220)||(35021999-35022053)
chr8 (115-165)||(43129536-43129586)
chr8 (1-34)||(31642981-31643014)
chr8 (115-151)||(5586993-5587029)
chr8 (1-33)||(18089468-18089500)
chr8 (1-33)||(23625734-23625766)
chr8 (1-37)||(26951243-26951279)
chr8 (4-36)||(29726579-29726611)
chr8 (1-37)||(31640191-31640227)
chr8 (1-37)||(35019319-35019355)
chr8 (1-33)||(40618448-40618480)
chr8 (1-37)||(43129422-43129458)
chr8 (115-154)||(5587887-5587926)
chr8 (118-165)||(29725690-29725737)
chr8 (115-153)||(26951129-26951167)
chr8 (115-165)||(38364574-38364624)
chr8 (1-31)||(39070261-39070291)
chr8 (4-37)||(26920526-26920559)
chr8 (4-33)||(39068916-39068945)
chr8 (1-33)||(5588023-5588055)
chr8 (1-29)||(17779420-17779448)
chr8 (160-220)||(26951076-26951136)
chr8 (1-33)||(28085928-28085960)
[»] chr6 (19 HSPs)
chr6 (115-220)||(13869014-13869119)
chr6 (166-220)||(13868184-13868238)
chr6 (115-165)||(5090187-5090237)
chr6 (118-165)||(24159187-24159234)
chr6 (115-165)||(34574698-34574748)
chr6 (1-37)||(24159071-24159107)
chr6 (1-37)||(32562640-32562676)
chr6 (1-37)||(34574826-34574862)
chr6 (115-164)||(15508295-15508344)
chr6 (163-216)||(24160173-24160226)
chr6 (1-33)||(5090320-5090352)
chr6 (1-33)||(12783060-12783092)
chr6 (1-33)||(15287540-15287572)
chr6 (115-165)||(13866210-13866260)
chr6 (115-157)||(32562522-32562564)
chr6 (166-207)||(15509070-15509111)
chr6 (1-37)||(5088665-5088701)
chr6 (1-33)||(13866096-13866128)
chr6 (1-33)||(24083075-24083107)
[»] chr1 (29 HSPs)
chr1 (115-207)||(23260832-23260924)
chr1 (115-165)||(44110035-44110085)
chr1 (115-165)||(44300047-44300097)
chr1 (163-220)||(23260104-23260161)
chr1 (115-166)||(4638339-4638390)
chr1 (115-165)||(4640196-4640246)
chr1 (115-165)||(43847532-43847582)
chr1 (1-37)||(43846288-43846324)
chr1 (1-37)||(43847688-43847724)
chr1 (1-37)||(44299149-44299185)
chr1 (1-37)||(44300175-44300211)
chr1 (115-165)||(11756975-11757025)
chr1 (1-34)||(23264092-23264125)
chr1 (1-37)||(4640330-4640366)
chr1 (1-33)||(5328807-5328839)
chr1 (1-37)||(11757101-11757137)
chr1 (1-33)||(30303043-30303075)
chr1 (1-33)||(52404555-52404587)
chr1 (1-33)||(52407333-52407365)
chr1 (1-32)||(4638233-4638264)
chr1 (118-157)||(42159561-42159600)
chr1 (1-31)||(12768194-12768224)
chr1 (1-33)||(23258914-23258946)
chr1 (5-33)||(29647628-29647656)
chr1 (5-33)||(30301085-30301113)
chr1 (1-33)||(31029977-31030009)
chr1 (1-33)||(33006483-33006515)
chr1 (1-33)||(34334273-34334305)
chr1 (1-33)||(46118191-46118223)
[»] scaffold0009 (2 HSPs)
scaffold0009 (115-165)||(94507-94557)
scaffold0009 (4-37)||(94636-94669)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1-33)||(6108-6140)


Alignment Details
Target: chr3 (Bit Score: 94; Significance: 6e-46; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 42879603 - 42879498
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  42879603 cactatagggcttgtaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccattccaaaacctaaaacacacataacg 42879504  T
Q  215 tgcaat 220  Q
    ||||||    
T  42879503 tgcaat 42879498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 39131840 - 39131735
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||| |||||     
T  39131840 cactatagggcttgtaacaattaaaatttcacatcaaattcaactcattatatacgttcataaattttgttccattccaaaatctagaacacacataaca 39131741  T
Q  215 tgcaat 220  Q
    ||||||    
T  39131740 tgcaat 39131735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 116 - 220
Target Start/End: Complemental strand, 48073822 - 48073718
Alignment:
Q  116 actatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacgt 215  Q
    |||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||| |||||| |||| ||    
T  48073822 actatagggcttgtaaaaattaaaatttcacatcaaattcaacccatcatatacgttcatatattttgttccattccaaaacctagaacacacataatgt 48073723  T
Q  216 gcaat 220  Q
    |||||    
T  48073722 gcaat 48073718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 118 - 220
Target Start/End: Original strand, 42164154 - 42164256
Alignment:
Q  118 tatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgc 217  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||| ||||   |||||||||    
T  42164154 tatagggcttgtaacaattaaaatttcacatcaaattcaacccatcatatacgttcataaattttgtttcattccaaaacctagaacatgcataacgtgc 42164253  T
Q  218 aat 220  Q
    |||    
T  42164254 aat 42164256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 43862479 - 43862374
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    |||||||| |||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||| ||||   ||||||    
T  43862479 cactatagagcttgtaacaattaaaatttcacatcaaattcaacccatcatatactttcataaattttgttccattccaaaacctagaacatgcataacg 43862380  T
Q  215 tgcaat 220  Q
    ||||||    
T  43862379 tgcaat 43862374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 36471693 - 36471606
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaaca 205  Q
    ||||||||||||| |||||||||||||||||||||||||| ||  ||| ||  ||||||||||||||||||||||| ||||||||| ||||    
T  36471693 cactatagggcttgtaacaattaaaatttcacatcaaatttaa--cat-atgcacgttcataaattttgttccattccaaaacctagaaca 36471606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 41889574 - 41889524
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  41889574 cactatagggcttgtaacaattaaaatttcacatcaaattcaacccatcat 41889524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 42167485 - 42167435
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  42167485 cactatagggcttgtaacaattaaaatttcacatcaaattcaacccatcat 42167435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 42877186 - 42877236
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  42877186 cactatagggcttgtaacaattaaaatttcacatcaaattcaacccatcat 42877236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 43358581 - 43358523
Alignment:
Q  163 catatacgttcataaattttgttccattt-caaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  43358581 catatacgttcataaattttgttccatttccaaaacctagaacacacataacgtgcaat 43358523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 50937506 - 50937452
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  50937506 atacgttcataaattttgttccattccaaaacctagaacacacataacgtgcaat 50937452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 220
Target Start/End: Original strand, 36465842 - 36465928
Alignment:
Q  138 aaatttcacatcaaattcaactca----tcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||| | ||    |||||||||||||||||||||||||||||  |||||||| |||||| ||||| ||||||    
T  36465842 aaatttcacatcaaattcatcccatcattcatatacgttcataaattttgttccattcaaaaacctagaacacacataacctgcaat 36465928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 41888755 - 41888803
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatc 163  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  41888755 cactatacggcttgtaacaattaaaatttcacatcaaattcaactcatc 41888803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 165
Target Start/End: Complemental strand, 2229315 - 2229273
Alignment:
Q  123 ggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  2229315 ggcttgtaacaattaaaatttcacatcaaattcaactcatcat 2229273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 22978865 - 22978919
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    |||||||||||||||||||||||||| |||||||| |||| | ||||||||||||    
T  22978865 atacgttcataaattttgttccatttaaaaacctagaacatatataacgtgcaat 22978919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 42878649 - 42878703
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||||| ||||||||| |||||| |||| |||||||    
T  42878649 atacgttcataaattttgttccattccaaaacctagaacacacataaagtgcaat 42878703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 43861547 - 43861597
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtg 216  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||||||    
T  43861547 atacgttcataaattttgttccattccaaaacctagaacacacataacgtg 43861597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 48071922 - 48071972
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  48071922 cactatagggcttgtaacagttaaaatttcacatcaaattcaacccatcat 48071972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 50938390 - 50938340
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  50938390 cactatatggcttgtaacaattaaaatttcacatcaaattcaacccatcat 50938340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2229438 - 2229402
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  2229438 aacattaaatgtcaaataaatgagtcaatttttctat 2229402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 39130891 - 39130943
Alignment:
Q  168 acgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||| |||| |||| |||||| ||||||||||||    
T  39130891 acgttcataaattttgttccattccaaatcctagaacacacataacgtgcaat 39130943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39132421 - 39132385
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  39132421 aacattaaatgtcaaataaatgagtcaatttttctat 39132385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 41889687 - 41889651
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  41889687 aacattaaatgtcaaataaatgagtcaatttttctat 41889651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 42163376 - 42163412
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  42163376 aacattaaatgtcaaataaatgagtcaatttttctat 42163412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43357933 - 43357969
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  43357933 aacattaaatgtcaaataaatgagtcaatttttctat 43357969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 50935544 - 50935580
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  50935544 aacattaaatgtcaaataaatgagtcaatttttctat 50935580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 50938502 - 50938466
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  50938502 aacattaaatgtcaaataaatgagtcaatttttctat 50938466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 43860675 - 43860722
Alignment:
Q  118 tatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||||||    
T  43860675 tatagggcttgtaataattaaaatttcacatcaaattcaacccatcat 43860722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 2228473 - 2228419
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    |||||||||||||||||||| |||| |||||| || |||||| ||||||||||||    
T  2228473 atacgttcataaattttgtttcattccaaaacttagaacacacataacgtgcaat 2228419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 22979773 - 22979723
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtg 216  Q
    ||||||||||||||||||||||||| ||||| ||| |||||| ||||||||    
T  22979773 atacgttcataaattttgttccattccaaaaactagaacacacataacgtg 22979723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 168
Target Start/End: Complemental strand, 32001083 - 32001045
Alignment:
Q  130 aacaattaaaatttcacatcaaattcaactcatcatata 168  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  32001083 aacaattaaaatttcacatcaaattcaacccatcatata 32001045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 50936601 - 50936651
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtg 216  Q
    ||||||||||||||||||||||||| ||||||||| |||||| | ||||||    
T  50936601 atacgttcataaattttgttccattccaaaacctagaacacacacaacgtg 50936651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 168
Target Start/End: Complemental strand, 55136487 - 55136449
Alignment:
Q  130 aacaattaaaatttcacatcaaattcaactcatcatata 168  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  55136487 aacaattaaaatttcacatcaaattcaacccatcatata 55136449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 7041694 - 7041727
Alignment:
Q  133 aattaaaatttcacatcaaattcaactcatcata 166  Q
    ||||||||||||||||||||||||||||||||||    
T  7041694 aattaaaatttcacatcaaattcaactcatcata 7041727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 48072877 - 48072934
Alignment:
Q  163 catatacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    |||| ||||||||||||||||||| ||| |||| |||| |||||| ||||||||||||    
T  48072877 catacacgttcataaattttgttcaattccaaaccctagaacacacataacgtgcaat 48072934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 6489004 - 6489036
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  6489004 aacattaaatgtcaaataaatgagtcaattttt 6489036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 22732559 - 22732523
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaa 151  Q
    ||||||||||||| |||||||||||||||||||||||    
T  22732559 cactatagggcttataacaattaaaatttcacatcaa 22732523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 22977911 - 22977943
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  22977911 aacattaaatgtcaaataaatgagtcaattttt 22977943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 43359547 - 43359515
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  43359547 aacattaaatgtcaaataaatgagtcaattttt 43359515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 43863156 - 43863120
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||| ||||||||||||||||||||||||||||||    
T  43863156 aacattgaatgtcaaataaatgagtcaatttttctat 43863120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 55136616 - 55136584
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  55136616 aacattaaatgtcaaataaatgagtcaattttt 55136584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 154
Target Start/End: Original strand, 22731626 - 22731665
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaatt 154  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  22731626 cactatagggtttctaacaattaaaatttcacattaaatt 22731665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 22978024 - 22978067
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaac 158  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||    
T  22978024 cactatatgacttgtaacaattaaaatttcacatcaaattcaac 22978067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 39129249 - 39129296
Alignment:
Q  118 tatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||||||| |||||||||||||||  ||||||||||||| ||||||    
T  39129249 tatagggcttgtaacaattaaaattttgcatcaaattcaacccatcat 39129296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 165
Target Start/End: Complemental strand, 43359427 - 43359385
Alignment:
Q  123 ggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||    
T  43359427 ggcttgtaacaattaaaatttcacaccaaattcaacccatcat 43359385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 54410680 - 54410650
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattt 31  Q
    |||||||||||||||||||||||||||||||    
T  54410680 aacattaaatgtcaaataaatgagtcaattt 54410650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 55135278 - 55135308
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattt 31  Q
    |||||||||||||||||||||||||||||||    
T  55135278 aacattaaatgtcaaataaatgagtcaattt 55135308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 7041652 - 7041685
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttc 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  7041652 aacattaaatgccaaataaatgagtcaatttttc 7041685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 37
Target Start/End: Complemental strand, 42880214 - 42880185
Alignment:
Q  8 aatgtcaaataaatgagtcaatttttctat 37  Q
    ||||||||||||||||||||||||||||||    
T  42880214 aatgtcaaataaatgagtcaatttttctat 42880185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 152
Target Start/End: Original strand, 54409563 - 54409600
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaa 152  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  54409563 cactataggtcttgtaacaattaaaatttcacatcaaa 54409600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 10825831 - 10825863
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||| ||||||||||||||||||||||    
T  10825831 aacattaaatatcaaataaatgagtcaattttt 10825863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 22429005 - 22428973
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  22429005 aacattaaatgtcaaataaatgaatcaattttt 22428973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 41888642 - 41888678
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||| || |||||||||||||||||||||    
T  41888642 aacattaaatgttaattaaatgagtcaatttttctat 41888678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 42877072 - 42877104
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||||||| |||||||    
T  42877072 aacattaaatgtcaaataaatgagtaaattttt 42877104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 53778433 - 53778401
Alignment:
Q  4 attaaatgtcaaataaatgagtcaatttttcta 36  Q
    |||||||||||||||||||| ||||||||||||    
T  53778433 attaaatgtcaaataaatgaatcaatttttcta 53778401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 1599604 - 1599709
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||    
T  1599604 cactgtagggcttgtaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccattccaaaacctagaacacacataacg 1599703  T
Q  215 tgcaat 220  Q
    ||||||    
T  1599704 tgcaat 1599709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 43543184 - 43543289
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||  ||||| ||||||    
T  43543184 cactatagggcttgtaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttcccttccaaaacctaggacacacataacg 43543283  T
Q  215 tgcaat 220  Q
    ||||||    
T  43543284 tgcaat 43543289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 38229658 - 38229553
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||| |||| | ||||||    
T  38229658 cactatagggcttgtaacaattaaaatttcacatcaaattcaacccatcatatatgttcataaattttgttccattgcaaaacctagaacatacataacg 38229559  T
Q  215 tgcaat 220  Q
    ||||||    
T  38229558 tgcaat 38229553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 47254630 - 47254525
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||| |||||| ||||||    
T  47254630 cactataggtcttgtaacaattaaaatttcacatcaaattcaacgcatcatatacgttcataaattttgttacattccaaaacctagaacacacataacg 47254531  T
Q  215 tgcaat 220  Q
    ||||||    
T  47254530 tgcaat 47254525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 41408047 - 41407942
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||  |||||||| ||||||  |||||    
T  41408047 cactatagggcttgtaacaattaaaatttcacatcaaattcaacccatcatatatgttcataaattttgttccattaaaaaacctagaacacatgtaacg 41407948  T
Q  215 tgcaat 220  Q
    ||||||    
T  41407947 tgcaat 41407942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 46160634 - 46160567
Alignment:
Q  129 taacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaa 196  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  46160634 taacaattaaaatttcacatcaaattcaacacatcatatacgttcataaattttgttccattccaaaa 46160567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 595398 - 595344
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  595398 atacgttcataaattttgttccattccaaaacctagaacacacataacgtgcaat 595344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 1600566 - 1600512
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  1600566 atacgttcataaattttgttccattccaaaacctagaacacacataacgtgcaat 1600512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 43544136 - 43544082
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  43544136 atacgttcataaattttgttccattccaaaacctataacacacataacgtgcaat 43544082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 43545049 - 43544999
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  43545049 cactatagggcttttaacaattaaaatttcacatcaaattcaacccatcat 43544999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 41406135 - 41406184
Alignment:
Q  116 actatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  41406135 actatagggcttgtaacaattaaaatttcacatcaaattcaacccatcat 41406184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 161
Target Start/End: Complemental strand, 596259 - 596213
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactca 161  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||    
T  596259 cactataggacttgtaacaattaaaatttcacatcaaattcaactca 596213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 33980617 - 33980671
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||||| ||||||||| ||| || ||||||||||||    
T  33980617 atacgttcataaattttgttccattccaaaacctagaactcacataacgtgcaat 33980671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 33981524 - 33981474
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtg 216  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||||||    
T  33981524 atacgttcataaattttgttccattccaaaacctagaacacacataacgtg 33981474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 37708244 - 37708194
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  37708244 cactatatggcttgtaacaattaaaatttcacatcaaattcaacccatcat 37708194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 38226274 - 38226328
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||||| ||||||||| |||||  ||||||||||||    
T  38226274 atacgttcataaattttgttccattccaaaacctagaacacgcataacgtgcaat 38226328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 585127 - 585070
Alignment:
Q  163 catatacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    |||||||||||||||||||||||||||| ||||||||| |||| | ||||| ||||||    
T  585127 catatacgttcataaattttgttccattccaaaacctagaacatacataacatgcaat 585070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 38224535 - 38224584
Alignment:
Q  116 actatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||||| ||| |||||||||||||||||||||||||||||| ||||||    
T  38224535 actataggacttgtaacaattaaaatttcacatcaaattcaacccatcat 38224584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 218
Target Start/End: Original strand, 19064114 - 19064211
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||  ||||       ||||||||||  ||||||| |||||||||||||| | |||||     
T  19064114 cactataaggcttgtaacaattaaaatttcacatcaaattcaacctatca------atcataaatttgattccattccaaaacctaaaacagacataacc 19064207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 37708357 - 37708321
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  37708357 aacattaaatgtcaaataaatgagtcaatttttctat 37708321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 38224421 - 38224457
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  38224421 aacattaaatgtcaaataaatgagtcaatttttctat 38224457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 38229761 - 38229725
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  38229761 aacattaaatgtcaaataaatgagtcaatttttctat 38229725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 41406022 - 41406058
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  41406022 aacattaaatgtcaaataaatgagtcaatttttctat 41406058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 47253692 - 47253744
Alignment:
Q  168 acgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||| ||||||||||| ||||||||| |||||| ||||||||||||    
T  47253692 acgttcataaaatttgttccattccaaaacctagaacacacataacgtgcaat 47253744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 33982468 - 33982418
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||| ||||||    
T  33982468 cactataggacttgtaacaattaacatttcacatcaaattcaacacatcat 33982418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 168
Target Start/End: Complemental strand, 37624019 - 37623981
Alignment:
Q  130 aacaattaaaatttcacatcaaattcaactcatcatata 168  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  37624019 aacaattaaaatttcacatcaaattcaacccatcatata 37623981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 41407823 - 41407877
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||| ||||||||||||| ||||| ||| |||||| ||||||||||||    
T  41407823 atacgttcatagattttgttccattccaaaatctagaacacacataacgtgcaat 41407877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 42825801 - 42825851
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||||||| || ||||||||||||||||||||||||||| || ||||||    
T  42825801 cactatagggtttgtaacaattaaaatttcacatcaaattccacccatcat 42825851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 42832035 - 42832089
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    |||||||||||||||||||||||||  |||| ||| |||||| ||||||||||||    
T  42832035 atacgttcataaattttgttccattctaaaatctagaacacacataacgtgcaat 42832089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 42833877 - 42833827
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||||||||||  ||||||||||||||||||||||||| ||| ||||||    
T  42833877 cactatagggcttgaaacaattaaaatttcacatcaaatttaacccatcat 42833827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 46159693 - 46159746
Alignment:
Q  167 tacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    |||||||||||||||||||||||| | ||||||| ||| || ||||||||||||    
T  46159693 tacgttcataaattttgttccattcctaaacctagaacgcacataacgtgcaat 46159746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 47254743 - 47254710
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  47254743 aacattaaatgtcaaataaatgagtcaatttttc 47254710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 586154 - 586122
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  586154 aacattaaatgtcaaataaatgagtcaattttt 586122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 596371 - 596335
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||| ||||||||||||||||||||||||||    
T  596371 aacattaaatatcaaataaatgagtcaatttttctat 596335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 8391523 - 8391555
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  8391523 aacattaaatgtcaaataaatgagtcaattttt 8391555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19233767 - 19233731
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    ||||||||||| |||||||||||||||||||||||||    
T  19233767 aacattaaatgccaaataaatgagtcaatttttctat 19233731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 33979446 - 33979482
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  33979446 aacattaaatgtcaaataaataagtcaatttttctat 33979482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 33979577 - 33979609
Alignment:
Q  130 aacaattaaaatttcacatcaaattcaactcat 162  Q
    |||||||||||||||||||||||||||||||||    
T  33979577 aacaattaaaatttcacatcaaattcaactcat 33979609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 33982587 - 33982551
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  33982587 aacattaaatgtcaaataaatgagttaatttttctat 33982551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43542601 - 43542637
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  43542601 aacattaaatgtcaaataaattagtcaatttttctat 43542637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 584786 - 584819
Alignment:
Q  4 attaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||| |||||||||||||||||    
T  584786 attaaatgtcaaataactgagtcaatttttctat 584819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 158
Target Start/End: Complemental strand, 586027 - 585998
Alignment:
Q  129 taacaattaaaatttcacatcaaattcaac 158  Q
    ||||||||||||||||||||||||||||||    
T  586027 taacaattaaaatttcacatcaaattcaac 585998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 1602270 - 1602229
Alignment:
Q  124 gcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||| ||||||||||||||| |||||||||||||| ||||||    
T  1602270 gcttgtaacaattaaaattttacatcaaattcaacccatcat 1602229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 41408157 - 41408124
Alignment:
Q  4 attaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||| |||||||    
T  41408157 attaaatgtcaaataaatgagtcaatctttctat 41408124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 42833999 - 42833966
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttc 34  Q
    |||||||||| |||||||||||||||||||||||    
T  42833999 aacattaaatatcaaataaatgagtcaatttttc 42833966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 1602391 - 1602359
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||| |||||||||||    
T  1602391 aacattaaatgtcaaataaattagtcaattttt 1602359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 8393413 - 8393381
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||| ||||||    
T  8393413 aacattaaatgtcaaataaatgagtcgattttt 8393381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 19063989 - 19064021
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  19063989 aacattaaatgtcaaataaatgactcaattttt 19064021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 46160721 - 46160689
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||||||| |||||||    
T  46160721 aacattaaatgtcaaataaatgagtaaattttt 46160689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 46934312 - 46934344
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||| ||||||||||||||||||||||    
T  46934312 aacattaaatatcaaataaatgagtcaattttt 46934344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 47252177 - 47252213
Alignment:
Q  129 taacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||||||||||||||||||||||| || ||||||    
T  47252177 taacaattaaaatttcacatcaaattctacccatcat 47252213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 118 - 220
Target Start/End: Original strand, 7111745 - 7111847
Alignment:
Q  118 tatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgc 217  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||    
T  7111745 tatagagcttgtaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccattgcaaaacctataacacacataacgtgc 7111844  T
Q  218 aat 220  Q
    |||    
T  7111845 aat 7111847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 43938390 - 43938494
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  43938390 cactatagggcttgtaa-aattaaaatttcacatcaaattcaacccatcatatacgttcataaattttgttccattccaaaacctaaaacacacataacg 43938488  T
Q  215 tgcaat 220  Q
    ||||||    
T  43938489 tgcaat 43938494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 8081079 - 8080974
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    |||||||||| || ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||| ||||||||| |||||| ||||||    
T  8081079 cactatagggtttataacaattaaaattttacatcaaattcaacccatcatatacgttcataaattttgtttcattccaaaacctagaacacaaataacg 8080980  T
Q  215 tgcaat 220  Q
    ||||||    
T  8080979 tgcaat 8080974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 30112857 - 30112958
Alignment:
Q  119 atagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgca 218  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| |||||  ||||||||||    
T  30112857 atagggcttgtaacaattaaaatttcacatcaaattcaacccatcatatacgttcataaattttgtgccattccaaaacctagaacacgcataacgtgca 30112956  T
Q  219 at 220  Q
    ||    
T  30112957 at 30112958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 31623365 - 31623468
Alignment:
Q  117 ctatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacgtg 216  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||| |||||| ||||| ||    
T  31623365 ctataggacttgtaacaattaaaatttcacatcaaattcaacccatcatatacgtttataaattttgttccattccaaaacctagaacacacataacatg 31623464  T
Q  217 caat 220  Q
    ||||    
T  31623465 caat 31623468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 26918319 - 26918424
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||||  ||||     
T  26918319 cactatatggcttgtaacaattaaaatttcacatcaaattcaactcatcatatacgcttataaattttgttccattccaaaacctataacacacgtaaca 26918418  T
Q  215 tgcaat 220  Q
    ||||||    
T  26918419 tgcaat 26918424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 51943565 - 51943461
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    ||||||||| |||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||| ||| |||||| |||||     
T  51943565 cactataggtcttgaaacaattaaaatttcacatcaaattcaacacatcatatacgttcataaattttgttacattccaaaa-ctagaacacacataaca 51943467  T
Q  215 tgcaat 220  Q
    ||||||    
T  51943466 tgcaat 51943461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 40846673 - 40846583
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaaca 205  Q
    |||||||| |||| ||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||  |||||||| ||||    
T  40846673 cactatagagcttgtaacaattaaaatttcacatcaaattcaacctatcatatacgtttataaattttgttccattcaaaaacctagaaca 40846583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 186
Target Start/End: Complemental strand, 43594161 - 43594093
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttc 186  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||||||||||    
T  43594161 cactatagggcttgtaacaattaaaatttcacatcaaattcaac---ccatatacgttcataaattttgttc 43594093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 49645971 - 49646021
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  49645971 cactatatggcttttaacaattaaaatttcacatcaaattcaactcatcat 49646021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 10657016 - 10657070
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||||| ||||    
T  10657016 atacgttcataaattttgttccattccaaaacctagaacacacataacgtacaat 10657070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 10659036 - 10658986
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||||||| || |||||||||||||||||||||||||||||| ||||||    
T  10659036 cactatagggtttgtaacaattaaaatttcacatcaaattcaacccatcat 10658986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 10871161 - 10871215
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||||| ||||    
T  10871161 atacgttcataaattttgttccattccaaaacctagaacacacataacgtacaat 10871215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 10873181 - 10873131
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||||||| || |||||||||||||||||||||||||||||| ||||||    
T  10873181 cactatagggtttgtaacaattaaaatttcacatcaaattcaacccatcat 10873131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 24577789 - 24577739
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||||||| || |||||||||||||||||||||||||||||| ||||||    
T  24577789 cactatagggtttgtaacaattaaaatttcacatcaaattcaacccatcat 24577739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 43939349 - 43939295
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||| ||| ||||||||| |||||| ||||||||||||    
T  43939349 atacgttcataaattttgttctattccaaaacctagaacacacataacgtgcaat 43939295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 157
Target Start/End: Original strand, 48952976 - 48953018
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaa 157  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  48952976 cactatagggcttgtaacaattaaaatttcacatcaaattcaa 48953018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 50790770 - 50790820
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||||||||||  ||||||||||||||||||||||||||||| ||||||    
T  50790770 cactatagggcttgcaacaattaaaatttcacatcaaattcaacacatcat 50790820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 50791690 - 50791636
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    |||||||||||||||||||||||||  |||||||| |||||| ||||||||||||    
T  50791690 atacgttcataaattttgttccattctaaaacctagaacacacataacgtgcaat 50791636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 50792569 - 50792519
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  50792569 cactatatggcttgtaacaattaaaatttcacatcaaattaaactcatcat 50792519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 8079608 - 8079665
Alignment:
Q  163 catatacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||| ||||||||||||||| |||| ||||||||| |||||| ||||||||||||    
T  8079608 catatacattcataaattttgtttcattccaaaacctagaacacacataacgtgcaat 8079665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 47650716 - 47650663
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatata 168  Q
    ||||||||| ||| |||||||||||||||||||||||||| ||| |||||||||    
T  47650716 cactataggtcttgtaacaattaaaatttcacatcaaatttaacccatcatata 47650663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 7111132 - 7111168
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  7111132 aacattaaatgtcaaataaatgagtcaatttttctat 7111168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8081192 - 8081156
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  8081192 aacattaaatgtcaaataaatgagtcaatttttctat 8081156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8840303 - 8840339
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  8840303 aacattaaatgtcaaataaatgagtcaatttttctat 8840339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 19869791 - 19869827
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  19869791 aacattaaatgtcaaataaatgagtcaatttttctat 19869827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19871226 - 19871190
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  19871226 aacattaaatgtcaaataaatgagtcaatttttctat 19871190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 24577905 - 24577869
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  24577905 aacattaaatgtcaaataaatgagtcaatttttctat 24577869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 26917716 - 26917752
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  26917716 aacattaaatgtcaaataaatgagtcaatttttctat 26917752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 40846786 - 40846750
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  40846786 aacattaaatgtcaaataaatgagtcaatttttctat 40846750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 43594785 - 43594749
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  43594785 aacattaaatgtcaaataaatgagtcaatttttctat 43594749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 43940371 - 43940335
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  43940371 aacattaaatgtcaaataaatgagtcaatttttctat 43940335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 51940929 - 51940965
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  51940929 aacattaaatgtcaaataaatgagtcaatttttctat 51940965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 51943677 - 51943641
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  51943677 aacattaaatgtcaaataaatgagtcaatttttctat 51943641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 31624548 - 31624501
Alignment:
Q  118 tatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||| ||| |||||||||||||||||||||||||||||| ||||||    
T  31624548 tataggacttgtaacaattaaaatttcacatcaaattcaacacatcat 31624501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 26919265 - 26919211
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||| | ||||||||| |||| | ||||||||||||    
T  26919265 atacgttcataaattttgttccactccaaaacctagaacaaacataacgtgcaat 26919211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 43590480 - 43590530
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||||| ||| ||||||||||||||| |||||||||||||| ||||||    
T  43590480 cactataggacttgtaacaattaaaatttaacatcaaattcaacccatcat 43590530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 51942613 - 51942667
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||| ||||||||||| ||||||||| |||||| ||||| ||||||    
T  51942613 atacgttcataaaatttgttccattccaaaacctagaacacacataacatgcaat 51942667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 10659151 - 10659115
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||| ||||||||||||||||||||||||||    
T  10659151 aacattaaatatcaaataaatgagtcaatttttctat 10659115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 10873296 - 10873260
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||| ||||||||||||||||||||||||||    
T  10873296 aacattaaatatcaaataaatgagtcaatttttctat 10873260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 165
Target Start/End: Complemental strand, 19871112 - 19871076
Alignment:
Q  129 taacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||||||||||||||||||||||||||| ||||||    
T  19871112 taacaattaaaatttcacatcaaattcaacccatcat 19871076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 30112242 - 30112278
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||| ||||||||||    
T  30112242 aacattaaatgtcaaataaatgagtcgatttttctat 30112278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30114381 - 30114349
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  30114381 aacattaaatgtcaaataaatgagtcaattttt 30114349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 31309496 - 31309528
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  31309496 aacattaaatgtcaaataaatgagtcaattttt 31309528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 38623604 - 38623568
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  38623604 aacattaaatgtcaaataaataagtcaatttttctat 38623568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43937842 - 43937878
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||| ||||||||||||||||||||||||    
T  43937842 aacattaaatgttaaataaatgagtcaatttttctat 43937878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 43940244 - 43940204
Alignment:
Q  125 cttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  43940244 cttctaacaattaaaatttcacatcatattcaacccatcat 43940204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 49645859 - 49645895
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||| ||||    
T  49645859 aacattaaatgtcaaataaatgagtcaattttcctat 49645895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 49646901 - 49646949
Alignment:
Q  172 tcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||| ||| ||||||||| |||||| ||||||||||||    
T  49646901 tcataaattttgttcaattccaaaacctagaacacacataacgtgcaat 49646949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 49649369 - 49649337
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  49649369 aacattaaatgtcaaataaatgagtcaattttt 49649337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 50790657 - 50790693
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||| ||||||||    
T  50790657 aacattaaatgtcaaataaatgagtcaaattttctat 50790693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 51941063 - 51941099
Alignment:
Q  129 taacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||||||||||||||||||||||| |||||||||    
T  51941063 taacaattaaaatttcacatcaaattctactcatcat 51941099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 38623491 - 38623448
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaac 158  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||||    
T  38623491 cactataaggcttgtaacaattaaaatttcacatcaagttcaac 38623448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 10657924 - 10657870
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    |||| |||||||||||||||||||| ||||||||| |||||| | ||| ||||||    
T  10657924 atacattcataaattttgttccattccaaaacctagaacacacacaacttgcaat 10657870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 10872069 - 10872015
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    |||| |||||||||||||||||||| ||||||||| |||||| | ||| ||||||    
T  10872069 atacattcataaattttgttccattccaaaacctagaacacacacaacttgcaat 10872015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 157
Target Start/End: Original strand, 19869906 - 19869948
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaa 157  Q
    |||||||||| || |||||| ||||||||||||||||||||||    
T  19869906 cactatagggtttgtaacaactaaaatttcacatcaaattcaa 19869948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 26923692 - 26923642
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||||||||| ||| ||||||||||| | |||||||||||| ||||||    
T  26923692 cactatagggcttgtaagaattaaaattttatatcaaattcaacccatcat 26923642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 49647787 - 49647737
Alignment:
Q  170 gttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||| ||| ||||||||| |||||  ||||||||||||    
T  49647787 gttcataaattttgttcaattccaaaacctagaacacgcataacgtgcaat 49647737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 3035924 - 3035892
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||||||| |||||||    
T  3035924 aacattaaatgtcaaataaatgagtaaattttt 3035892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 7113846 - 7113814
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||| |||||||||||    
T  7113846 aacattaaatgtcaaataaattagtcaattttt 7113814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 13861914 - 13861882
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||| ||||||||||||||||||||||    
T  13861914 aacattaaatatcaaataaatgagtcaattttt 13861882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 26923805 - 26923773
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||| |||||||||||    
T  26923805 aacattaaatgtcaaataaattagtcaattttt 26923773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 31624667 - 31624631
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  31624667 aacattaaatgtccaataaattagtcaatttttctat 31624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 47649484 - 47649516
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||| ||||||||||||    
T  47649484 aacattaaatgtcaaataaacgagtcaattttt 47649516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 50792691 - 50792655
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||| |||| |||||||||||||||||||    
T  50792691 aacattaaatgttaaatgaatgagtcaatttttctat 50792655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 8e-39; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 37250366 - 37250471
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||  ||||||    
T  37250366 cactatagggcttgtaacaattaaaatttcacatcaaattcaacccatcatatacgttcataaattttgttccattccaaaacctagaacacgcataacg 37250465  T
Q  215 tgcaat 220  Q
    ||||||    
T  37250466 tgcaat 37250471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 118 - 220
Target Start/End: Complemental strand, 8525673 - 8525571
Alignment:
Q  118 tatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgc 217  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |  ||| |||||||||    
T  8525673 tatagggcttgtaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccattccaaaacctagagtacacataacgtgc 8525574  T
Q  218 aat 220  Q
    |||    
T  8525573 aat 8525571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 29640337 - 29640232
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    |||||||||| || |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||| |||||| ||||||    
T  29640337 cactatagggtttgtaacaattaaaatttcacatcaaattcaacccatcatatatgttcataaattttgttccattccaaaacctagaacacacataacg 29640238  T
Q  215 tgcaat 220  Q
    ||||||    
T  29640237 tgcaat 29640232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 5100425 - 5100530
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||| |||||| |||| |    
T  5100425 cactataggtcttgtaacaattaaaatttcacatcaaattcaacgcatcatatacgttcataaattttgttacattccaaaacctagaacacacataatg 5100524  T
Q  215 tgcaat 220  Q
    ||||||    
T  5100525 tgcaat 5100530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 34858466 - 34858571
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    ||||||||||||| ||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| |||| ||||||||| |||||| ||||||    
T  34858466 cactatagggcttgtaacaattaaaatttcacatcaaattccacccatcataaacgttcataaattttgtttcattccaaaacctagaacacacataacg 34858565  T
Q  215 tgcaat 220  Q
    ||||||    
T  34858566 tgcaat 34858571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 29639520 - 29639625
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||| | ||||||||| ||||||  |||||    
T  29639520 cactatagggcttgtaacaattaaagtttcacatcaaattcaacccatcatatacattcataaattttgttccactccaaaacctagaacacatgtaacg 29639619  T
Q  215 tgcaat 220  Q
    ||||||    
T  29639620 tgcaat 29639625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 3035793 - 3035688
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    ||||||||||||| ||| || ||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||| ||||||||| |||||| |||| |    
T  3035793 cactatagggcttgtaataactaaaatttcacatcaaattcaacacatcatatatgttcatacattttgttccattccaaaacctataacacatataatg 3035694  T
Q  215 tgcaat 220  Q
    ||||||    
T  3035693 tgcaat 3035688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 3034866 - 3034920
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||    
T  3034866 atacgttcataaattttattccattccaaaacctaaaacacacataacgtgcaat 3034920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 15525199 - 15525253
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  15525199 atacgttcataaattttgttccattccaaaacctagaacacacataacgtgcaat 15525253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 29389171 - 29389219
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatc 163  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||    
T  29389171 cactatagggtttgtaacaattaaaatttcacatcaaattcaactcatc 29389219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 29390847 - 29390804
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaac 158  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  29390847 cactatagggcttgtaacaattaaaatttcacatcaaattcaac 29390804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 8520443 - 8520493
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| ||||||    
T  8520443 cactatagggcttgtaacaattaaaattttacatcaaattcaacccatcat 8520493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 37256262 - 37256212
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||||||||||    
T  37256262 cactatagggcttgtaacaattaaaatttgacatcaaactcaactcatcat 37256212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 15524195 - 15524231
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  15524195 aacattaaatgtcaaataaatgagtcaatttttctat 15524231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 15527264 - 15527228
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  15527264 aacattaaatgtcaaataaatgagtcaatttttctat 15527228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 37256375 - 37256339
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  37256375 aacattaaatgtcaaataaatgagtcaatttttctat 37256339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 34859440 - 34859385
Alignment:
Q  165 tatacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||  |||||||||||    
T  34859440 tatacgttcataaattttgttctattccaaaacctagaacacatgtaacgtgcaat 34859385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 37252582 - 37252535
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataac 213  Q
    ||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  37252582 atacgttcataaattttgttcaatttcaaaacctagaacacacataac 37252535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 3036397 - 3036361
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    ||||||||||||||||||||||||||| |||||||||    
T  3036397 aacattaaatgtcaaataaatgagtcactttttctat 3036361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 8526279 - 8526247
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  8526279 aacattaaatgtcaaataaatgagtcaattttt 8526247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 11078423 - 11078391
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  11078423 aacattaaatgtcaaataaatgagtcaattttt 11078391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 37249740 - 37249776
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    ||||||||||||||||||| |||||||||||||||||    
T  37249740 aacattaaatgtcaaataactgagtcaatttttctat 37249776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 15526111 - 15526072
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaaca 205  Q
    ||||||||||||||||||||||||| ||||||||| ||||    
T  15526111 atacgttcataaattttgttccattccaaaacctagaaca 15526072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 5100316 - 5100346
Alignment:
Q  7 aaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||    
T  5100316 aaatgtcaaataaatgagtcaatttttctat 5100346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 5101319 - 5101265
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||| ||||||||||| ||||| ||| |||||| |||| |||||||    
T  5101319 atacgttcataaaatttgttccattccaaaatctagaacacacataatgtgcaat 5101265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 8524723 - 8524777
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    |||||||||||||||||||| |||| ||||||||| |||||  ||||| ||||||    
T  8524723 atacgttcataaattttgtttcattccaaaacctataacacgcataacttgcaat 8524777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 6719689 - 6719726
Alignment:
Q  131 acaattaaaatttcacatcaaattcaactcatcatata 168  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  6719689 acaattaaaatttcacatcaaatttaacccatcatata 6719726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 29639407 - 29639444
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaa-tttttctat 37  Q
    |||||||||||||||||||||||||||| |||||||||    
T  29639407 aacattaaatgtcaaataaatgagtcaagtttttctat 29639444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 824960 - 824928
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||||||| |||||||    
T  824960 aacattaaatgtcaaataaatgagtaaattttt 824928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5102973 - 5102941
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  5102973 aacattaaatgtcaaataaatgaatcaattttt 5102941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 11076874 - 11076906
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||| ||||||||||    
T  11076874 aacattaaatgtcaaataaatgcgtcaattttt 11076906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 5e-37; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 118 - 220
Target Start/End: Original strand, 39160045 - 39160147
Alignment:
Q  118 tatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgc 217  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||| |    
T  39160045 tatagggcttgtaacaattaaaatttcacatcaaattcaacccatcatatacgttcataaattttgttccattccaaaacctagaacacacataacgtac 39160144  T
Q  218 aat 220  Q
    |||    
T  39160145 aat 39160147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 118 - 220
Target Start/End: Complemental strand, 39209149 - 39209047
Alignment:
Q  118 tatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgc 217  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||| |    
T  39209149 tatagggcttgtaacaattaaaatttcacatcaaattcaacccatcatatacgttcataaattttgttccattccaaaacctagaacacacataacgtac 39209050  T
Q  218 aat 220  Q
    |||    
T  39209049 aat 39209047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 18248534 - 18248429
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||| ||| || ||||||    
T  18248534 cactatagggcttgtaacaattaaaatttcacatcaaattcaacccatcatatacgttcataaattttgtttcattccaaaacctagaacgcaaataacg 18248435  T
Q  215 tgcaat 220  Q
     |||||    
T  18248434 cgcaat 18248429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 14454037 - 14453983
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  14454037 atacgttcataaattttgttccattccaaaacctagaacacacataacgtgcaat 14453983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 18246637 - 18246687
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  18246637 cactatagggcttgtaacaattaaaatttcacatcaaattcaacccatcat 18246687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 24520371 - 24520321
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  24520371 cactatagggcttgtaacaattaaaatttcacatcaaattcaacccatcat 24520321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 36601937 - 36601883
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  36601937 atacgttcataaattttgttctatttcaaaacctagaacacacataacgtgcaat 36601883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 36602885 - 36602835
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  36602885 cactataaggcttataacaattaaaatttcacatcaaattcaactcatcat 36602835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 6319483 - 6319532
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatca 164  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  6319483 cactatagggcttgtaacaattaaaatttcacatcaaattcaacccatca 6319532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 218
Target Start/End: Complemental strand, 21191714 - 21191617
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    ||||||||||||| |||||||||||||||||||||||||| |||  ||||       |||||||||| |||||||| |||||||||||||| | |||||     
T  21191714 cactatagggcttgtaacaattaaaatttcacatcaaatttaacctatca------atcataaatttggttccattccaaaacctaaaacagacataacc 21191621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 6320369 - 6320423
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    |||||||||||||||||||||||||  |||||||| |||||| ||||||||||||    
T  6320369 atacgttcataaattttgttccattctaaaacctataacacacataacgtgcaat 6320423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 6322293 - 6322243
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| ||||||    
T  6322293 cactatagggcttgtaacaattaaaatttcatatcaaattcaacccatcat 6322243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 14454515 - 14454465
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  14454515 cactatatggcttgtaacaattaaaatttcacatcaaattcaacccatcat 14454465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 18247552 - 18247606
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||    
T  18247552 atacgttcataaattttgttccattccaaaacctagaacaaacataacgtgcaat 18247606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 157
Target Start/End: Complemental strand, 33182722 - 33182680
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaa 157  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  33182722 cactatagggcttgtaacaattaaaatttcacatcaaattcaa 33182680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 6319369 - 6319405
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  6319369 aacattaaatgtcaaataaatgagtcaatttttctat 6319405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 18248649 - 18248613
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  18248649 aacattaaatgtcaaataaatgagtcaatttttctat 18248613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 33182834 - 33182798
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  33182834 aacattaaatgtcaaataaatgagtcaatttttctat 33182798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 39159928 - 39159964
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  39159928 aacattaaatgtcaaataaatgagtcaatttttctat 39159964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39209266 - 39209230
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  39209266 aacattaaatgtcaaataaatgagtcaatttttctat 39209230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39879959 - 39879923
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  39879959 aacattaaatgtcaaataaatgagtcaatttttctat 39879923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 14454629 - 14454594
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttcta 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  14454629 aacattaaatgtcaaataaatgagtcaatttttcta 14454594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 6321273 - 6321219
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||||| |||||| || || ||| ||||||||||||    
T  6321273 atacgttcataaattttgttccattccaaaacatagaatacacataacgtgcaat 6321219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 168
Target Start/End: Complemental strand, 20919802 - 20919764
Alignment:
Q  130 aacaattaaaatttcacatcaaattcaactcatcatata 168  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  20919802 aacaattaaaatttcacatcaaattcaacccatcatata 20919764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 168
Target Start/End: Complemental strand, 27478992 - 27478954
Alignment:
Q  130 aacaattaaaatttcacatcaaattcaactcatcatata 168  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  27478992 aacaattaaaatttcacatcaaattcaacccatcatata 27478954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 33179799 - 33179853
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||| ||| ||||||| ||||||||| |||||| ||||||||||||    
T  33179799 atacgttcataaaattttttccattccaaaacctagaacacacataacgtgcaat 33179853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 33180713 - 33180659
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    |||||||||||||||||||||||||  |||| ||| |||||| ||||||||||||    
T  33180713 atacgttcataaattttgttccattctaaaatctagaacacacataacgtgcaat 33180659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 157
Target Start/End: Original strand, 36600883 - 36600925
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaa 157  Q
    ||||||| ||||| |||||||||||||||||||||||||||||    
T  36600883 cactatatggcttgtaacaattaaaatttcacatcaaattcaa 36600925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 40495366 - 40495328
Alignment:
Q  116 actatagggcttctaacaattaaaatttcacatcaaatt 154  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  40495366 actatagggcttataacaattaaaatttcacatcaaatt 40495328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 14452138 - 14452171
Alignment:
Q  4 attaaatgtcaaataaatgagtcaatttttctat 37  Q
    ||||||||||||||||||||||||||||||||||    
T  14452138 attaaatgtcaaataaatgagtcaatttttctat 14452171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 6644621 - 6644653
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  6644621 aacattaaatgtcaaataaatgagtcaattttt 6644653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 18246522 - 18246554
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  18246522 aacattaaatgtcaaataaatgagtcaattttt 18246554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 24460667 - 24460615
Alignment:
Q  116 actatagggcttctaacaattaaaatttcacatcaaattcaactcatcatata 168  Q
    |||||||| |||  ||||||||||||||||||||||||||||  |||||||||    
T  24460667 actataggtcttgcaacaattaaaatttcacatcaaattcaatccatcatata 24460615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 27479126 - 27479094
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  27479126 aacattaaatgtcaaataaatgagtcaattttt 27479094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 33178791 - 33178827
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||| ||||||||    
T  33178791 aacattaaatgtcaaataaatgagtcaaattttctat 33178827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 33178907 - 33178950
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaac 158  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||||    
T  33178907 cactataaggcttgtaacaattaaaattttacatcaaattcaac 33178950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 20919177 - 20919207
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattt 31  Q
    |||||||||||||||||||||||||||||||    
T  20919177 aacattaaatgtcaaataaatgagtcaattt 20919207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 27477792 - 27477822
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattt 31  Q
    |||||||||||||||||||||||||||||||    
T  27477792 aacattaaatgtcaaataaatgagtcaattt 27477822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 38932391 - 38932341
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||||||| || ||||||||||||||| |||||||||| ||| ||||||    
T  38932391 cactatagggtttgtaacaattaaaattttacatcaaattgaacccatcat 38932341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 518238 - 518291
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatata 168  Q
    ||||||||| |||  || ||||||||||||||||||||| |||| |||||||||    
T  518238 cactataggtcttgcaaaaattaaaatttcacatcaaatccaacccatcatata 518291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 6322406 - 6322373
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttc 34  Q
    |||||||||||||||||||||||||||| |||||    
T  6322406 aacattaaatgtcaaataaatgagtcaaattttc 6322373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 33
Target Start/End: Complemental strand, 6647264 - 6647235
Alignment:
Q  4 attaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||||||||||||    
T  6647264 attaaatgtcaaataaatgagtcaattttt 6647235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 164
Target Start/End: Original strand, 14452263 - 14452296
Alignment:
Q  131 acaattaaaatttcacatcaaattcaactcatca 164  Q
    |||||||||||||||||||||||||||| |||||    
T  14452263 acaattaaaatttcacatcaaattcaacccatca 14452296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 20919932 - 20919895
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaat-ttttctat 37  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  20919932 aacattaaatgtcaaataaatgagtcaatattttctat 20919895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 33
Target Start/End: Complemental strand, 21178533 - 21178504
Alignment:
Q  4 attaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||||||||||||    
T  21178533 attaaatgtcaaataaatgagtcaattttt 21178504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 1054837 - 1054805
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||||||| |||||||    
T  1054837 aacattaaatgtcaaataaatgagtaaattttt 1054805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 3851802 - 3851770
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  3851802 aacattaaatgtcaaataaatgactcaattttt 3851770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21191837 - 21191805
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  21191837 aacattaaatgtcaaataaatgactcaattttt 21191805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 24460781 - 24460749
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||||||| |||||||    
T  24460781 aacattaaatgtcaaataaatgagtaaattttt 24460749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 36602997 - 36602961
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  36602997 aacattaaatgtcaaataaataagtaaatttttctat 36602961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 42080875 - 42080843
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||||||| |||||||    
T  42080875 aacattaaatgtcaaataaatgagtaaattttt 42080843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 78; Significance: 2e-36; HSPs: 4)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 123 - 220
Target Start/End: Original strand, 69684 - 69781
Alignment:
Q  123 ggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||||||    
T  69684 ggcttgtaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaatttcgttccattccaaaacctagaacacacataacgtgcaat 69781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 71705 - 71655
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  71705 cactatagagcttgtaacaattaaaatttcacatcaaattcaacccatcat 71655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 69530 - 69562
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  69530 aacattaaatgtcaaataaatgagtcaattttt 69562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 71818 - 71786
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||| ||||||||||||||||||||||    
T  71818 aacattaaatttcaaataaatgagtcaattttt 71786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 76; Significance: 3e-35; HSPs: 3)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 115 - 206
Target Start/End: Complemental strand, 941 - 850
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacac 206  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||    
T  941 cactatagggcttgtaacaattaaaatttcacatcaaattcaacccatcatatacgttcataaattttgttccattccaaaacctagaacac 850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 20408 - 20354
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  20408 atacgttcataaattttgttccattccaaaacctagaacacacataacgtgcaat 20354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 1523 - 1490
Alignment:
Q  4 attaaatgtcaaataaatgagtcaatttttctat 37  Q
    ||||||||||||||||||||||||||||||||||    
T  1523 attaaatgtcaaataaatgagtcaatttttctat 1490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 5e-34; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 115 - 216
Target Start/End: Original strand, 31640303 - 31640404
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||| |||||| ||||||    
T  31640303 cactatagggcttgtaaaaattaaaatttcacatcaaattcaacccatcatatacgttcatatattttgttccattccaaaacctagaacacacataacg 31640402  T
Q  215 tg 216  Q
    ||    
T  31640403 tg 31640404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 115 - 216
Target Start/End: Complemental strand, 41671364 - 41671263
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    |||||||||  || |||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| |||| |||||||||||||||| ||||||    
T  41671364 cactataggttttgtaacaattaaaatttcacatcaaattcaatgcatcatataagttcataaattttgttacattccaaaacctaaaacacacataacg 41671265  T
Q  215 tg 216  Q
    ||    
T  41671264 tg 41671263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 35021145 - 35021199
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  35021145 atacgttcataaattttgttccattccaaaacctagaacacacataacgtgcaat 35021199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 38362732 - 38362786
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    |||||||||||||||||||| |||||||||||||| |||||| ||||||||||||    
T  38362732 atacgttcataaattttgttgcatttcaaaacctagaacacacataacgtgcaat 38362786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 26920418 - 26920358
Alignment:
Q  160 catcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||| ||||||||||||||||| ||||||| |||||||||||||||| ||||| ||||||    
T  26920418 catcaaatacgttcataaattttattccattccaaaacctaaaacacacataacatgcaat 26920358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 19143075 - 19143025
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  19143075 cactatatggcttgtaacaattaaaatttcacatcaaattcaacacatcat 19143025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 35019433 - 35019483
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  35019433 cactatagtgcttgtaacaattaaaatttcacatcaaattcaacccatcat 35019483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 38363640 - 38363586
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||||| ||||||||| |||||| | ||||||||||    
T  38363640 atacgttcataaattttgttccattccaaaacctagaacacacacaacgtgcaat 38363586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 41670446 - 41670500
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||||    
T  41670446 atacgttcataaaatttgttccattccaaaacctagaacacacataacgtgcaat 41670500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 39069028 - 39069081
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatata 168  Q
    ||||||||| |||  ||||||||||||||||||||||||||||| |||||||||    
T  39069028 cactataggtcttgcaacaattaaaatttcacatcaaattcaacccatcatata 39069081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19143190 - 19143154
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  19143190 aacattaaatgtcaaataaatgagtcaatttttctat 19143154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 29725572 - 29725608
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  29725572 aacattaaatgtcaaataaatgagtcaatttttctat 29725608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 38362498 - 38362534
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  38362498 aacattaaatgtcaaataaatgagtcaatttttctat 38362534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 38364741 - 38364705
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  38364741 aacattaaatgtcaaataaatgagtcaatttttctat 38364705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 41671470 - 41671434
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  41671470 aacattaaatgtcaaataaatgagtcaatttttctat 41671434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 23625855 - 23625906
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcata 166  Q
    |||||||||| || |||||||||||||||||||||||||||||  |||||||    
T  23625855 cactatagggtttgtaacaattaaaatttcacatcaaattcaatccatcata 23625906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 15825789 - 15825739
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||| | ||| |||||||||||||||||||||||||||||| ||||||    
T  15825789 cactatatgacttgtaacaattaaaatttcacatcaaattcaacccatcat 15825739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 19142132 - 19142078
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||| ||| ||||||||| |||||| ||||| ||||||    
T  19142132 atacgttcataaattttgttctattccaaaacctagaacacacataacatgcaat 19142078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 26920449 - 26920411
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaat 153  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  26920449 cactatagggcttgtaacaattaaaatttcacatcaaat 26920411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 165
Target Start/End: Complemental strand, 31642894 - 31642852
Alignment:
Q  123 ggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||| |||||||||||||||||||||||||||||| ||||||    
T  31642894 ggcttgtaacaattaaaatttcacatcaaattcaacccatcat 31642852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 35022053 - 35021999
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||||| ||||| ||| |||||| |||| |||||||    
T  35022053 atacgttcataaattttgttccattccaaaatctagaacacatataatgtgcaat 35021999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 43129536 - 43129586
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||| | ||| |||||||||||||||||||| ||||||||||||||||    
T  43129536 cactatatgacttgtaacaattaaaatttcacattaaattcaactcatcat 43129586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 31643014 - 31642981
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  31643014 aacattaaatgtcaaataaatgagtcaatttttc 31642981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 5586993 - 5587029
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaa 151  Q
    ||||||||||||| |||||||||||||||||||||||    
T  5586993 cactatagggcttataacaattaaaatttcacatcaa 5587029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 18089500 - 18089468
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  18089500 aacattaaatgtcaaataaatgagtcaattttt 18089468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 23625734 - 23625766
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  23625734 aacattaaatgtcaaataaatgagtcaattttt 23625766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 26951279 - 26951243
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  26951279 aacattaaatgtcaaataaatcagtcaatttttctat 26951243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 29726611 - 29726579
Alignment:
Q  4 attaaatgtcaaataaatgagtcaatttttcta 36  Q
    |||||||||||||||||||||||||||||||||    
T  29726611 attaaatgtcaaataaatgagtcaatttttcta 29726579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 31640191 - 31640227
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||| ||||||||||||||||||||||||||    
T  31640191 aacattaaatatcaaataaatgagtcaatttttctat 31640227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 35019319 - 35019355
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  35019319 aacattaaatgtcaaataaatgagtaaatttttctat 35019355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 40618480 - 40618448
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  40618480 aacattaaatgtcaaataaatgagtcaattttt 40618448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43129422 - 43129458
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    ||||||||||||||||||||||| |||||||||||||    
T  43129422 aacattaaatgtcaaataaatgattcaatttttctat 43129458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 154
Target Start/End: Complemental strand, 5587926 - 5587887
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaatt 154  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  5587926 cactatagggtttctaacaattaaaatttcacattaaatt 5587887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 29725690 - 29725737
Alignment:
Q  118 tatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||| |||| ||| ||||||||||| |||||||||||||||||||||    
T  29725690 tatagagcttgtaaaaattaaaattttacatcaaattcaactcatcat 29725737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 26951167 - 26951129
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaat 153  Q
    ||||||||| ||| |||||||||||||||||||||||||    
T  26951167 cactataggacttgtaacaattaaaatttcacatcaaat 26951129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 38364624 - 38364574
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||||||| || ||| |||||||||||||||||||||| ||| ||||||    
T  38364624 cactatagggtttgtaataattaaaatttcacatcaaattaaacccatcat 38364574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 39070291 - 39070261
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattt 31  Q
    |||||||||||||||||||||||||||||||    
T  39070291 aacattaaatgtcaaataaatgagtcaattt 39070261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 26920559 - 26920526
Alignment:
Q  4 attaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||| |||||||||||||||    
T  26920559 attaaatgtcaaataaataagtcaatttttctat 26920526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 33
Target Start/End: Original strand, 39068916 - 39068945
Alignment:
Q  4 attaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||||||||||||    
T  39068916 attaaatgtcaaataaatgagtcaattttt 39068945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5588055 - 5588023
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||| ||||||||||||||||||||||||||    
T  5588055 aacattcaatgtcaaataaatgagtcaattttt 5588023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 17779448 - 17779420
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaat 29  Q
    |||||||||||||||||||||||||||||    
T  17779448 aacattaaatgtcaaataaatgagtcaat 17779420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 26951136 - 26951076
Alignment:
Q  160 catcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||| |||| |||||||||||| ||||||| ||||| ||| || ||| ||||||||||||    
T  26951136 catcaaatacattcataaattttattccattccaaaatctataatacacataacgtgcaat 26951076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 28085960 - 28085928
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  28085960 aacattaaatgtcaaataaatgaatcaattttt 28085928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 5e-34; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 13869119 - 13869014
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacacagataacg 214  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||| |||||| |||||     
T  13869119 cactatagggcttataacaataaaaatttcacatcaaattcaactcaccatatacgctcataaattttgttccattccaaaacctagaacacacataaca 13869020  T
Q  215 tgcaat 220  Q
    ||||||    
T  13869019 tgcaat 13869014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 13868184 - 13868238
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  13868184 atacgttcataaattttgttccattccaaaacctaaaacacacataacgtgcaat 13868238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 5090237 - 5090187
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  5090237 cactatagggcttgtaacaattaaaatttcacatcaaattcaacccatcat 5090187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 24159187 - 24159234
Alignment:
Q  118 tatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||    
T  24159187 tatagggcttgtaacaattaaaattttacatcaaattcaactcatcat 24159234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 34574748 - 34574698
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| ||||||    
T  34574748 cactatagggcttgtaaaaattaaaatttcacatcaaattcaacccatcat 34574698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 24159071 - 24159107
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  24159071 aacattaaatgtcaaataaatgagtcaatttttctat 24159107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 32562676 - 32562640
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  32562676 aacattaaatgtcaaataaatgagtcaatttttctat 32562640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 34574862 - 34574826
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  34574862 aacattaaatgtcaaataaatgagtcaatttttctat 34574826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 15508295 - 15508344
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatca 164  Q
    ||||||| ||||| |||||||||||||||||||| ||||||||| |||||    
T  15508295 cactatatggcttgtaacaattaaaatttcacattaaattcaacccatca 15508344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 24160173 - 24160226
Alignment:
Q  163 catatacgttcataaattttgttccatttcaaaacctaaaacacagataacgtg 216  Q
    ||||||||||||||||||||||||| || ||||| ||| |||||| ||||||||    
T  24160173 catatacgttcataaattttgttcccttccaaaatctagaacacacataacgtg 24160226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5090352 - 5090320
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  5090352 aacattaaatgtcaaataaatgagtcaattttt 5090320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 12783060 - 12783092
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  12783060 aacattaaatgtcaaataaatgagtcaattttt 12783092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 15287540 - 15287572
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  15287540 aacattaaatgtcaaataaatgagtcaattttt 15287572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 13866210 - 13866260
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||||| |||| ||||||||||||||| |||||||| ||||| ||||||    
T  13866210 cactatagcgcttgtaacaattaaaattttacatcaaactcaacccatcat 13866260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 157
Target Start/End: Complemental strand, 32562564 - 32562522
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaa 157  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||    
T  32562564 cactatatggcttataacaattaaaatttgacatcaaattcaa 32562522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 207
Target Start/End: Original strand, 15509070 - 15509111
Alignment:
Q  166 atacgttcataaattttgttccatttcaaaacctaaaacaca 207  Q
    ||||||| ||||||||||||||||| ||||||||| ||||||    
T  15509070 atacgttaataaattttgttccattccaaaacctagaacaca 15509111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 5088665 - 5088701
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    ||||||||||||||||||||  |||||||||||||||    
T  5088665 aacattaaatgtcaaataaagaagtcaatttttctat 5088701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 13866096 - 13866128
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||| |||||||||||    
T  13866096 aacattaaatgtcaaataaattagtcaattttt 13866128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24083075 - 24083107
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  24083075 aacattaaatgtcaaataaatgaatcaattttt 24083107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 115 - 207
Target Start/End: Complemental strand, 23260924 - 23260832
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcatatacgttcataaattttgttccatttcaaaacctaaaacaca 207  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||| |||||    
T  23260924 cactatagggcttgtaacaattaaaatttcacatcaaattcaacgcatcatatatgttcataaattttgttccattccaaaacctaacacaca 23260832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 44110085 - 44110035
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  44110085 cactatagggcttgtaacaattaaaatttcacatcaaattcaacccatcat 44110035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 44300097 - 44300047
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  44300097 cactatatggcttgtaacaattaaaatttcacatcaaattcaactcatcat 44300047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 23260104 - 23260161
Alignment:
Q  163 catatacgttcataaattttgttccatttcaaaacctaaaacacagataacgtgcaat 220  Q
    |||||||||||||||||||||||||||| ||||||||| |||||| ||||| ||||||    
T  23260104 catatacgttcataaattttgttccattccaaaacctagaacacacataacatgcaat 23260161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 4638339 - 4638390
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcata 166  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||||||||    
T  4638339 cactatagggtttgcaacaattaaaatttcacatcaaattcaactcatcata 4638390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 4640246 - 4640196
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  4640246 cactatagagcttgtaacaattaaaatttcacatcaaattcaacccatcat 4640196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 43847582 - 43847532
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||| |||||||| |||||||||||||||||||||||||||||| ||||||    
T  43847582 cactgtagggcttgtaacaattaaaatttcacatcaaattcaacccatcat 43847532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43846288 - 43846324
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  43846288 aacattaaatgtcaaataaatgagtcaatttttctat 43846324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 43847724 - 43847688
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  43847724 aacattaaatgtcaaataaatgagtcaatttttctat 43847688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 44299149 - 44299185
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  44299149 aacattaaatgtcaaataaatgagtcaatttttctat 44299185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 44300211 - 44300175
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  44300211 aacattaaatgtcaaataaatgagtcaatttttctat 44300175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 11757025 - 11756975
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    |||||||||| || |||||||||||||||||||||| ||||||| ||||||    
T  11757025 cactatagggtttgtaacaattaaaatttcacatcacattcaacccatcat 11756975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 23264125 - 23264092
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  23264125 aacattaaatgtcaaataaatgagtcaatttttc 23264092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 4640366 - 4640330
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    ||||||||||||||||||||||| |||||||||||||    
T  4640366 aacattaaatgtcaaataaatgaatcaatttttctat 4640330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5328839 - 5328807
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  5328839 aacattaaatgtcaaataaatgagtcaattttt 5328807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 11757137 - 11757101
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttttctat 37  Q
    |||||||||| ||||||||||||||||||||||||||    
T  11757137 aacattaaatctcaaataaatgagtcaatttttctat 11757101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30303075 - 30303043
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  30303075 aacattaaatgtcaaataaatgagtcaattttt 30303043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 52404555 - 52404587
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  52404555 aacattaaatgtcaaataaatgagtcaattttt 52404587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 52407365 - 52407333
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  52407365 aacattaaatgtcaaataaatgagtcaattttt 52407333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 4638233 - 4638264
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaatttt 32  Q
    ||||||||||||||||||||||||||||||||    
T  4638233 aacattaaatgtcaaataaatgagtcaatttt 4638264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 157
Target Start/End: Original strand, 42159561 - 42159600
Alignment:
Q  118 tatagggcttctaacaattaaaatttcacatcaaattcaa 157  Q
    ||||||| || |||||||||||||||||||||||||||||    
T  42159561 tatagggtttgtaacaattaaaatttcacatcaaattcaa 42159600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 12768194 - 12768224
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattt 31  Q
    |||||||||||||||||||||||||||||||    
T  12768194 aacattaaatgtcaaataaatgagtcaattt 12768224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 23258914 - 23258946
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||| ||||||||||||||||||||||    
T  23258914 aacattaaatctcaaataaatgagtcaattttt 23258946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 33
Target Start/End: Original strand, 29647628 - 29647656
Alignment:
Q  5 ttaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||    
T  29647628 ttaaatgtcaaataaatgagtcaattttt 29647656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 33
Target Start/End: Original strand, 30301085 - 30301113
Alignment:
Q  5 ttaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||    
T  30301085 ttaaatgtcaaataaatgagtcaattttt 30301113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 31029977 - 31030009
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||||||| |||||||    
T  31029977 aacattaaatgtcaaataaatgagtaaattttt 31030009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 33006515 - 33006483
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  33006515 aacattaaatgtcaaataaatgaatcaattttt 33006483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 34334305 - 34334273
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||||||||||||||||| |||||||||||    
T  34334305 aacattaaatgtcaaataaataagtcaattttt 34334273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 46118191 - 46118223
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    ||||||| |||||||||||||||||||||||||    
T  46118191 aacattatatgtcaaataaatgagtcaattttt 46118223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 94557 - 94507
Alignment:
Q  115 cactatagggcttctaacaattaaaatttcacatcaaattcaactcatcat 165  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  94557 cactatagggcttgtaacaattaaaatttcacatcaaattcaacccatcat 94507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 94669 - 94636
Alignment:
Q  4 attaaatgtcaaataaatgagtcaatttttctat 37  Q
    ||||||||||||||||||||||||||||||||||    
T  94669 attaaatgtcaaataaatgagtcaatttttctat 94636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 6140 - 6108
Alignment:
Q  1 aacattaaatgtcaaataaatgagtcaattttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  6140 aacattaaatgtcaaataaatgagtcaattttt 6108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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