View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12694_high_27 (Length: 207)
Name: NF12694_high_27
Description: NF12694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12694_high_27 |
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Alignment Details
Target: chr5 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 24 - 192
Target Start/End: Original strand, 33817169 - 33817337
Alignment:
| Q |
24 |
agaatggagtttgttgattgaagttttaacaaagtttggttttaatgcaacttcccgtaattggataaaggccatactggattcagctcacttatctatc |
123 |
Q |
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| T |
33817169 |
agaatggagttttttgattgaagttttaacaaagtttggttttagtacaacttcccgtaattggataatggccacactggattcagctcacttatctatc |
33817268 |
T |
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| Q |
124 |
tctatcaatggtacccaacatggttacttttaagtgtactttaagtgtactcgcttttctatcttgcag |
192 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33817269 |
tctatcaatggtacccaacatggttacttttaagtgtactttaagtgtactcgcttttctatcttgcag |
33817337 |
T |
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