View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12696_low_6 (Length: 273)

Name: NF12696_low_6
Description: NF12696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12696_low_6
NF12696_low_6
[»] chr8 (39 HSPs)
chr8 (77-247)||(10108365-10108539)
chr8 (81-251)||(5554868-5555042)
chr8 (82-251)||(14820295-14820467)
chr8 (80-251)||(21148141-21148316)
chr8 (80-251)||(26136683-26136858)
chr8 (80-251)||(30789712-30789887)
chr8 (82-251)||(2583320-2583493)
chr8 (76-251)||(17623092-17623270)
chr8 (80-251)||(43481519-43481695)
chr8 (81-251)||(7689523-7689696)
chr8 (76-221)||(7689758-7689907)
chr8 (71-221)||(14820529-14820683)
chr8 (82-221)||(43851665-43851807)
chr8 (76-251)||(14767712-14767888)
chr8 (79-221)||(10108605-10108751)
chr8 (79-221)||(21147933-21148080)
chr8 (80-189)||(5555140-5555249)
chr8 (151-251)||(22494454-22494557)
chr8 (86-251)||(42605759-42605926)
chr8 (81-216)||(10171383-10171522)
chr8 (80-251)||(42113189-42113361)
chr8 (149-248)||(21144713-21144816)
chr8 (78-221)||(26532778-26532926)
chr8 (82-133)||(18044154-18044205)
chr8 (90-221)||(42112993-42113127)
chr8 (156-251)||(43851869-43851968)
chr8 (81-189)||(42606024-42606132)
chr8 (148-221)||(14767573-14767650)
chr8 (81-218)||(17622889-17623027)
chr8 (93-221)||(30789519-30789650)
chr8 (79-133)||(20877072-20877126)
chr8 (81-130)||(35367409-35367458)
chr8 (79-221)||(26136920-26137065)
chr8 (81-132)||(1949651-1949702)
chr8 (87-138)||(39888486-39888537)
chr8 (150-188)||(38726755-38726793)
chr8 (81-138)||(40487736-40487793)
chr8 (81-133)||(14767505-14767557)
chr8 (81-133)||(20875697-20875749)
[»] chr5 (39 HSPs)
chr5 (81-251)||(14411696-14411870)
chr5 (81-251)||(7126122-7126296)
chr5 (81-251)||(31799845-31800018)
chr5 (79-249)||(14143899-14144072)
chr5 (78-251)||(17762279-17762455)
chr5 (82-250)||(24837375-24837547)
chr5 (82-247)||(18336467-18336637)
chr5 (81-247)||(24074302-24074472)
chr5 (86-251)||(29444810-29444979)
chr5 (82-221)||(23979136-23979279)
chr5 (80-251)||(20709417-20709591)
chr5 (81-251)||(24650904-24651078)
chr5 (87-251)||(27159162-27159327)
chr5 (82-251)||(993951-994123)
chr5 (80-221)||(6817121-6817265)
chr5 (82-189)||(31799640-31799747)
chr5 (83-252)||(4919194-4919366)
chr5 (83-251)||(41001558-41001729)
chr5 (149-251)||(6817326-6817432)
chr5 (81-189)||(24837168-24837276)
chr5 (82-189)||(18336727-18336833)
chr5 (80-189)||(29445077-29445185)
chr5 (78-221)||(30512284-30512430)
chr5 (78-221)||(30552624-30552770)
chr5 (81-189)||(17762553-17762661)
chr5 (87-221)||(7125923-7126060)
chr5 (81-189)||(14144172-14144280)
chr5 (79-189)||(27158988-27159097)
chr5 (81-185)||(14411941-14412044)
chr5 (83-138)||(993751-993806)
chr5 (151-251)||(22571282-22571386)
chr5 (81-189)||(4918988-4919097)
chr5 (81-221)||(20709205-20709355)
chr5 (84-189)||(24650704-24650807)
chr5 (148-221)||(24074537-24074614)
chr5 (225-255)||(18336635-18336665)
chr5 (209-255)||(20947075-20947121)
chr5 (96-138)||(41001370-41001412)
chr5 (80-133)||(28071825-28071878)
[»] chr3 (57 HSPs)
chr3 (80-249)||(14262243-14262416)
chr3 (79-251)||(16721988-16722164)
chr3 (79-251)||(45969912-45970088)
chr3 (82-251)||(5800605-5800778)
chr3 (82-251)||(19112970-19113143)
chr3 (81-251)||(14171791-14171965)
chr3 (82-251)||(14161871-14162044)
chr3 (83-251)||(52552893-52553065)
chr3 (80-251)||(30500246-30500420)
chr3 (81-251)||(33372405-33372579)
chr3 (82-251)||(45003496-45003669)
chr3 (81-251)||(20853901-20854074)
chr3 (78-251)||(21632897-21633069)
chr3 (71-251)||(11003722-11003905)
chr3 (79-221)||(9266972-9267118)
chr3 (81-251)||(9267180-9267353)
chr3 (81-250)||(49986526-49986700)
chr3 (81-251)||(43572388-43572564)
chr3 (85-251)||(38283553-38283723)
chr3 (76-251)||(15328457-15328633)
chr3 (80-251)||(17465572-17465747)
chr3 (85-244)||(17649222-17649384)
chr3 (81-221)||(35995677-35995821)
chr3 (79-251)||(35995883-35996056)
chr3 (151-251)||(47575477-47575581)
chr3 (81-221)||(33372640-33372783)
chr3 (79-221)||(14171584-14171729)
chr3 (81-189)||(16722262-16722370)
chr3 (82-189)||(14162142-14162248)
chr3 (79-189)||(14262033-14262143)
chr3 (82-174)||(19720333-19720425)
chr3 (82-189)||(5800876-5800982)
chr3 (78-221)||(30500039-30500184)
chr3 (80-189)||(45970186-45970296)
chr3 (81-189)||(19112763-19112872)
chr3 (81-189)||(21633167-21633275)
chr3 (81-138)||(27946187-27946244)
chr3 (79-130)||(20853692-20853743)
chr3 (81-224)||(43572623-43572769)
chr3 (82-221)||(4204709-4204851)
chr3 (148-221)||(15328695-15328772)
chr3 (87-138)||(27946114-27946165)
chr3 (149-221)||(38283785-38283861)
chr3 (81-132)||(49986856-49986907)
chr3 (87-189)||(52552695-52552799)
chr3 (169-251)||(4204913-4204999)
chr3 (81-133)||(3425975-3426027)
chr3 (78-138)||(35741906-35741966)
chr3 (80-138)||(3424772-3424830)
chr3 (80-133)||(24490246-24490299)
chr3 (81-132)||(17465366-17465417)
chr3 (94-133)||(35740829-35740868)
chr3 (81-132)||(45003823-45003874)
chr3 (2-76)||(8648543-8648617)
chr3 (76-138)||(36990981-36991043)
chr3 (76-138)||(37016421-37016483)
chr3 (81-133)||(15328788-15328840)
[»] chr7 (41 HSPs)
chr7 (81-251)||(28218368-28218542)
chr7 (80-251)||(41600163-41600338)
chr7 (81-255)||(25772532-25772710)
chr7 (81-251)||(12006745-12006919)
chr7 (86-251)||(1250411-1250580)
chr7 (82-251)||(23704662-23704834)
chr7 (81-251)||(48672484-48672658)
chr7 (76-251)||(38879929-38880105)
chr7 (81-251)||(20963700-20963872)
chr7 (84-252)||(48648433-48648603)
chr7 (81-251)||(20458896-20459069)
chr7 (82-251)||(20419741-20419915)
chr7 (82-251)||(6465855-6466027)
chr7 (81-251)||(23383705-23383879)
chr7 (79-220)||(28218175-28218321)
chr7 (72-221)||(20419526-20419679)
chr7 (83-251)||(7658174-7658342)
chr7 (151-250)||(31851445-31851548)
chr7 (81-221)||(23704896-23705039)
chr7 (148-251)||(10409440-10409547)
chr7 (81-221)||(12006540-12006683)
chr7 (80-221)||(25772362-25772506)
chr7 (81-221)||(48672276-48672422)
chr7 (82-225)||(16995200-16995346)
chr7 (79-221)||(10409609-10409754)
chr7 (81-221)||(20458691-20458834)
chr7 (82-221)||(38879723-38879867)
chr7 (83-221)||(44816832-44816978)
chr7 (80-220)||(7657967-7658113)
chr7 (82-221)||(41599958-41600101)
chr7 (76-133)||(33162863-33162920)
chr7 (77-179)||(6466086-6466188)
chr7 (82-133)||(24195199-24195250)
chr7 (80-133)||(31852157-31852210)
chr7 (148-221)||(24195031-24195108)
chr7 (82-133)||(23383499-23383550)
chr7 (83-221)||(31851242-31851382)
chr7 (83-181)||(48648263-48648360)
chr7 (194-249)||(33162651-33162706)
chr7 (81-138)||(14646972-14647029)
chr7 (82-189)||(20963494-20963602)
[»] chr4 (57 HSPs)
chr4 (85-251)||(9396702-9396872)
chr4 (74-251)||(46046629-46046809)
chr4 (85-251)||(38574173-38574343)
chr4 (82-251)||(9516815-9516988)
chr4 (85-251)||(3018014-3018185)
chr4 (84-251)||(9618982-9619152)
chr4 (90-251)||(15640724-15640888)
chr4 (85-251)||(7819018-7819187)
chr4 (80-247)||(37012916-37013086)
chr4 (151-251)||(26252337-26252441)
chr4 (148-251)||(18713026-18713133)
chr4 (148-251)||(34064187-34064294)
chr4 (87-251)||(48580071-48580239)
chr4 (87-251)||(4355887-4356054)
chr4 (80-251)||(31090266-31090441)
chr4 (82-246)||(41947066-41947232)
chr4 (81-251)||(3273620-3273795)
chr4 (81-251)||(31943949-31944123)
chr4 (72-251)||(13132146-13132327)
chr4 (76-221)||(31944185-31944334)
chr4 (83-225)||(35376164-35376309)
chr4 (79-178)||(48259820-48259919)
chr4 (81-221)||(9396934-9397077)
chr4 (83-221)||(9516611-9516753)
chr4 (80-189)||(9619250-9619359)
chr4 (168-252)||(18667375-18667463)
chr4 (81-138)||(31218303-31218360)
chr4 (82-189)||(26252508-26252615)
chr4 (83-189)||(34063983-34064089)
chr4 (81-221)||(38573968-38574111)
chr4 (82-221)||(3273855-3273996)
chr4 (80-189)||(12904745-12904853)
chr4 (79-133)||(41946962-41947016)
chr4 (85-221)||(13131943-13132084)
chr4 (83-221)||(15640950-15641093)
chr4 (81-138)||(46046429-46046486)
chr4 (84-221)||(48259986-48260126)
chr4 (79-130)||(18667620-18667671)
chr4 (79-189)||(35376399-35376508)
chr4 (87-221)||(37012712-37012850)
chr4 (79-123)||(31082182-31082226)
chr4 (87-178)||(48579871-48579962)
chr4 (87-138)||(4356202-4356253)
chr4 (73-138)||(3018332-3018398)
chr4 (80-138)||(36887678-36887736)
chr4 (88-133)||(12520643-12520688)
chr4 (82-189)||(31090060-31090168)
chr4 (80-133)||(36889005-36889058)
chr4 (80-121)||(46935178-46935219)
chr4 (152-221)||(7819249-7819322)
chr4 (81-133)||(7819347-7819399)
chr4 (74-110)||(31218256-31218292)
chr4 (81-123)||(50462733-50462775)
chr4 (80-138)||(53896444-53896502)
chr4 (81-138)||(20069620-20069677)
chr4 (81-133)||(18713289-18713341)
chr4 (82-138)||(43313533-43313589)
[»] chr6 (32 HSPs)
chr6 (82-251)||(9481182-9481355)
chr6 (78-255)||(32017705-32017885)
chr6 (79-247)||(30617964-30618131)
chr6 (81-251)||(24731934-24732111)
chr6 (148-251)||(33637625-33637732)
chr6 (80-221)||(18500313-18500457)
chr6 (152-251)||(2299515-2299617)
chr6 (107-251)||(3230068-3230215)
chr6 (159-251)||(10321936-10322032)
chr6 (78-221)||(24732173-24732319)
chr6 (81-133)||(18500656-18500708)
chr6 (83-207)||(19284130-19284258)
chr6 (82-189)||(26385278-26385385)
chr6 (85-251)||(26385483-26385649)
chr6 (87-189)||(9154884-9154987)
chr6 (92-251)||(30459106-30459267)
chr6 (81-132)||(2299641-2299692)
chr6 (86-133)||(10321737-10321784)
chr6 (80-221)||(9854122-9854265)
chr6 (166-245)||(18500558-18500641)
chr6 (93-221)||(33714494-33714630)
chr6 (148-189)||(9481453-9481494)
chr6 (81-138)||(21070859-21070916)
chr6 (209-250)||(33714693-33714734)
chr6 (80-132)||(30458898-30458950)
chr6 (79-138)||(2299337-2299396)
chr6 (149-221)||(14680949-14681025)
chr6 (81-134)||(33637843-33637896)
chr6 (202-246)||(14681092-14681136)
chr6 (82-138)||(21069514-21069570)
chr6 (149-189)||(30618232-30618272)
chr6 (149-221)||(32017605-32017679)
[»] chr2 (46 HSPs)
chr2 (80-251)||(22263396-22263573)
chr2 (79-251)||(17850791-17850967)
chr2 (81-255)||(26236126-26236304)
chr2 (82-251)||(42670924-42671097)
chr2 (93-250)||(26135828-26135989)
chr2 (82-251)||(17463092-17463264)
chr2 (83-251)||(26560759-26560932)
chr2 (82-251)||(15106067-15106240)
chr2 (79-252)||(19251468-19251644)
chr2 (149-251)||(23854871-23854977)
chr2 (152-251)||(23806022-23806125)
chr2 (81-251)||(39878102-39878275)
chr2 (78-189)||(17463362-17463473)
chr2 (95-251)||(33290062-33290222)
chr2 (81-251)||(20498746-20498918)
chr2 (82-189)||(23806223-23806330)
chr2 (82-189)||(23854688-23854795)
chr2 (81-221)||(19251705-19251848)
chr2 (82-221)||(17850587-17850729)
chr2 (81-221)||(26236330-26236473)
chr2 (82-221)||(15106302-15106443)
chr2 (81-207)||(13254496-13254626)
chr2 (82-217)||(34548574-34548712)
chr2 (85-138)||(13254758-13254811)
chr2 (81-188)||(23046706-23046813)
chr2 (82-129)||(23855025-23855072)
chr2 (152-251)||(13284613-13284716)
chr2 (81-221)||(20498980-20499124)
chr2 (82-138)||(42670717-42670773)
chr2 (81-221)||(26560555-26560697)
chr2 (82-221)||(22263192-22263334)
chr2 (79-133)||(30959998-30960052)
chr2 (80-133)||(12419049-12419102)
chr2 (80-133)||(12431109-12431162)
chr2 (81-129)||(23047913-23047961)
chr2 (82-221)||(26136052-26136195)
chr2 (82-188)||(44098894-44099000)
chr2 (86-189)||(30390463-30390566)
chr2 (82-138)||(30958684-30958740)
chr2 (81-131)||(13284411-13284461)
chr2 (80-130)||(33290377-33290427)
chr2 (3-76)||(18278926-18278999)
chr2 (212-249)||(30390634-30390671)
chr2 (94-138)||(13284735-13284779)
chr2 (160-221)||(39878337-39878402)
chr2 (82-138)||(39878395-39878450)
[»] chr1 (46 HSPs)
chr1 (82-251)||(39826255-39826424)
chr1 (82-251)||(4907167-4907340)
chr1 (82-251)||(8292804-8292977)
chr1 (82-255)||(34749306-34749483)
chr1 (79-251)||(18462283-18462458)
chr1 (79-251)||(33628895-33629071)
chr1 (82-251)||(39711074-39711245)
chr1 (80-251)||(30299230-30299404)
chr1 (81-251)||(29696564-29696737)
chr1 (80-251)||(52058216-52058388)
chr1 (79-251)||(24467626-24467801)
chr1 (85-251)||(17606307-17606481)
chr1 (82-251)||(48071961-48072134)
chr1 (84-251)||(43539349-43539520)
chr1 (82-251)||(39970850-39971024)
chr1 (80-221)||(39826048-39826193)
chr1 (5-81)||(45981417-45981493)
chr1 (80-189)||(17606579-17606686)
chr1 (70-189)||(39711343-39711462)
chr1 (82-221)||(52058011-52058154)
chr1 (80-221)||(4906960-4907105)
chr1 (194-251)||(20995785-20995842)
chr1 (82-221)||(24467862-24468002)
chr1 (81-189)||(33628689-33628797)
chr1 (87-251)||(42510219-42510388)
chr1 (153-250)||(13229803-13229904)
chr1 (80-220)||(29696794-29696937)
chr1 (81-221)||(48072196-48072340)
chr1 (80-189)||(8293078-8293188)
chr1 (78-221)||(18462519-18462666)
chr1 (81-138)||(20995697-20995754)
chr1 (82-138)||(18342339-18342395)
chr1 (81-189)||(30252169-30252279)
chr1 (82-189)||(30299502-30299609)
chr1 (82-221)||(39970645-39970789)
chr1 (82-136)||(13230056-13230110)
chr1 (81-138)||(17500768-17500825)
chr1 (81-138)||(43400752-43400809)
chr1 (75-132)||(43539675-43539732)
chr1 (81-129)||(27039637-27039685)
chr1 (101-221)||(42510034-42510157)
chr1 (149-240)||(16294163-16294258)
chr1 (80-133)||(34749136-34749189)
chr1 (80-221)||(20995903-20996047)
chr1 (199-255)||(30780265-30780321)
chr1 (87-133)||(37236723-37236769)
[»] scaffold0809 (2 HSPs)
scaffold0809 (80-251)||(1409-1583)
scaffold0809 (81-133)||(1733-1785)
[»] scaffold0117 (1 HSPs)
scaffold0117 (87-221)||(12217-12355)
[»] scaffold0361 (2 HSPs)
scaffold0361 (80-251)||(4560-4736)
scaffold0361 (81-221)||(4798-4941)
[»] scaffold0449 (2 HSPs)
scaffold0449 (79-249)||(7406-7581)
scaffold0449 (83-188)||(7227-7332)
[»] scaffold0141 (2 HSPs)
scaffold0141 (81-251)||(8324-8496)
scaffold0141 (82-221)||(8557-8700)
[»] scaffold0176 (1 HSPs)
scaffold0176 (81-251)||(15838-16007)
[»] scaffold0881 (1 HSPs)
scaffold0881 (79-251)||(425-598)
[»] scaffold0185 (2 HSPs)
scaffold0185 (81-186)||(3868-3973)
scaffold0185 (190-251)||(4074-4135)
[»] scaffold0352 (2 HSPs)
scaffold0352 (81-138)||(6001-6058)
scaffold0352 (81-133)||(4666-4718)
[»] scaffold0477 (2 HSPs)
scaffold0477 (81-133)||(4879-4931)
scaffold0477 (78-129)||(5078-5128)
[»] scaffold0157 (1 HSPs)
scaffold0157 (88-133)||(229-274)


Alignment Details
Target: chr8 (Bit Score: 103; Significance: 3e-51; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 77 - 247
Target Start/End: Original strand, 10108365 - 10108539
Alignment:
Q  77 ttaaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcaga 176  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||         |||||||||||||||| |||||||||| |    
T  10108365 ttaaagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcata 10108464  T
Q  177 tttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattc 247  Q
    || ||||||||||    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  10108465 ttcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccttgtaatttcagattc 10108539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 5554868 - 5555042
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||         |||| ||||||||||| | |||||||| ||| |    
T  5554868 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagattcagattttgtccctataatttcatattct 5554967  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||||    ||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  5554968 tccacttttggtcccttctttcatcacgtcagcagaatctgcataaattacgtccctggaatttcagattcctcc 5555042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 82 - 251
Target Start/End: Original strand, 14820295 - 14820467
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||         |||||||||||||||| |||||||||| ||| ||    
T  14820295 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaa-gatttagattttgtccctgtaatttcatattctt 14820393  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||    
T  14820394 ccacttttggtccctcctttcatcacatcagcagaatctgcataaattacgtccctgtaatttcagatttctcc 14820467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 80 - 251
Target Start/End: Complemental strand, 21148316 - 21148141
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||||||||||| ||||          | ||||||||||||| |||||||||| |||     
T  21148316 aagggtaaatacctcttttcgtctctgtaatattagtgaattccggttttagtccctgtaaaaaaaaaaaattagattttgtccttgtaatttcatattc 21148217  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||||    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  21148216 ttccacttttagtccctcctttcatcatgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcc 21148141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 80 - 251
Target Start/End: Original strand, 26136683 - 26136858
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||| ||||          ||||||||||||||| ||||||||||||||     
T  26136683 aagggtgaatacctcttttcgttcctgtaatattagcgaattccagttttagtccctgtaaaaaaaaaaatttagattttgtccttgtaatttcagattc 26136782  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||| ||||    ||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  26136783 ttccaattttgattcctcctttcatcaagtcagcataatctgcataaattacgtccctgtaatttcagatttctcc 26136858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 80 - 251
Target Start/End: Complemental strand, 30789887 - 30789712
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||||||| ||||         |||||||||||||||| ||||||||||||||     
T  30789887 aagggtaaatacctcttttcgtccctgtaatattagtaaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattc 30789788  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||||    | || |||||||||||||||| ||||||||| |||| ||||| |||||||||| ||||||||    
T  30789787 ttccacttttggtccatcgtttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcatattcctcc 30789712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 82 - 251
Target Start/End: Original strand, 2583320 - 2583493
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||||||||||||| | ||| ||||||||||||||| || |||||||   |||         |||||||||||||||| ||||||||| |||| ||    
T  2583320 gggtaaatacctcttttcattcctgtaatattagcgaatttcgattttagttcttgtaaaataaaagatttagattttgtccctgtaatttcggattctt 2583419  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    | ||||||    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2583420 ctacttttgatccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcc 2583493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 76 - 251
Target Start/End: Complemental strand, 17623270 - 17623092
Alignment:
Q  76 attaaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcag 175  Q
    |||||||| ||||||||||||||| ||||| |||||||||| ||||| |||||||||  ||||         |||||||||||||||| ||||||||||     
T  17623270 attaaaggttaaatacctcttttcatccctgtaatattagccaattctggttttagtgcctgtaaaaaaaa-gatttagattttgtccttgtaatttcaa 17623172  T
Q  176 atttttccacttttc----ctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||| ||||||||||     |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  17623171 attcttccacttttggtcactcctttcatcacgtcagcagaatctgcataaattatgtccctgtaatttcaaattcctcc 17623092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 80 - 251
Target Start/End: Complemental strand, 43481695 - 43481519
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt-nnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||          |||||| ||||||||| |||||||||| |||    
T  43481695 aagggtaaatatctcttttcgtcactgtaatattagcgaattccggttttagtctctgtaaaaaaaaaagatttaaattttgtccctgtaatttcaaatt 43481596  T
Q  179 tttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
     ||||||| ||      |||||| |||||||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  43481595 cttccactcttggtctttcctttaatcacgtcagcacaatctgcataaattacgtccttgtaatttcagattcctcc 43481519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 7689523 - 7689696
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||  |||         ||||||||||| |||| |||||||||||||| |    
T  7689523 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggctttagtccttgtaaataaaaagatttagattt-gtccttgtaatttcagattct 7689621  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||||    |||| ||||||||| || ||| ||||||||| |||| ||||| |||||||||||||||||||    
T  7689622 tccacttttggtccctcttttcatcacatcggcaaaatctgcatcaattacgtccttgtaatttcagattcctcc 7689696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 76 - 221
Target Start/End: Complemental strand, 7689907 - 7689758
Alignment:
Q  76 attaaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcag 175  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||  |||         |||||| ||||||||| |||||||||||    
T  7689907 attaaagggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccgtgtaaaaaaaaagatttaaattttgtccctgtaatttcag 7689808  T
Q  176 atttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||| ||||||||||    |||| || || |||||||||||||||||||||    
T  7689807 attcttccacttttgatccctcattccaccacgtcagcagaatctgcata 7689758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 221
Target Start/End: Complemental strand, 14820683 - 14820529
Alignment:
Q  71 aaaatattaaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaat 170  Q
    |||||| |||||||| |||||||||||| |||||| ||||||||||||||||||||||||||| ||||         |||||||||||||||| ||||||    
T  14820683 aaaataataaagggttaatacctcttttagtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaat 14820584  T
Q  171 ttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||| ||| ||||||||||    |||  || || |||||||||||||||||||||    
T  14820583 ttcatattcttccacttttggtcccttattccaccacgtcagcagaatctgcata 14820529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 43851665 - 43851807
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||         |||||||||||||||| |||||||||||||| ||    
T  43851665 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-aaacaaaagatttagattttgtccctgtaatttcagattctt 43851763  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||    |||| || || ||| |||||||||||||||||    
T  43851764 ccacttttgatccctcattccaccacatcagcagaatctgcata 43851807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 251
Target Start/End: Complemental strand, 14767888 - 14767712
Alignment:
Q  76 attaaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcag 175  Q
    ||||| |||||||||||||||||||| ||| |||||||||  |||| || |||||||| ||||          | ||||||||||||| ||||||||||     
T  14767888 attaatgggtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgtaaaaaaa---aattagattttgtccctgtaatttcat 14767792  T
Q  176 atttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||| ||||| |||     |||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  14767791 attcttccagtttgtgtccctcttttcatcacgtcaacagaatctgcataaattacgtccctgtaatttcagattcctcc 14767712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 79 - 221
Target Start/End: Complemental strand, 10108751 - 10108605
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||         |||||||||||||||| |||||||||| |||    
T  10108751 aaagggttaatacctcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatatt 10108652  T
Q  179 tttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
     ||||||||||    |||  || || |||||||||||||||||||||    
T  10108651 cttccacttttggtcccttattccaccacgtcagcagaatctgcata 10108605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 221
Target Start/End: Original strand, 21147933 - 21148080
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt-nnnnnnnnngatttagattttgtccatgtaatttcagat 177  Q
    ||||||| |||||||||||| |||||| ||||||||||||||||||||||||||| ||||          |||||||||||||||| |||||||||||||    
T  21147933 aaagggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagat 21148032  T
Q  178 ttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    | ||||||||||    |||  || || |||||||||||||||||||||    
T  21148033 tcttccacttttggtcccttattccaccacgtcagcagaatctgcata 21148080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 5555249 - 5555140
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    |||||| || |||||||||||||||| ||||||||||||||| ||||||||||||||||         |||||||||||||||| |||||||||| |||     
T  5555249 aagggttaacacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 5555150  T
Q  180 ttccactttt 189  Q
    ||||||||||    
T  5555149 ttccactttt 5555140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 22494454 - 22494557
Alignment:
Q  151 ttagattttgtccatgtaatttcagatttttccactttt---cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattc 247  Q
    ||||||||||| | |||||||||| ||| ||||| ||||   ||| |||| ||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  22494454 ttagattttgttcctgtaatttcatattcttccatttttggtccttctttaatcacgtcagcagaatctgcataaattacgtccctgtaattttagattc 22494553  T
Q  248 ctcc 251  Q
    ||||    
T  22494554 ctcc 22494557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 86 - 251
Target Start/End: Original strand, 42605759 - 42605926
Alignment:
Q  86 aaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttccac 185  Q
    |||||| ||||||||||| | |||||||| ||||||||| ||||||| |||||          | ||||||||| ||| |||||||||| ||| ||||||    
T  42605759 aaatacttcttttcgtccatgtaatattaacgaattccgattttagtttctgtaaaaaaaa--aattagattttatccctgtaatttcatattcttccac 42605856  T
Q  186 tttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||    |||||||| |||||||||| ||||| |||||||||| |||||||||||||||| ||||||||    
T  42605857 ttttggtccctcctttaatcacgtcagtagaatatgcataaattacgtccctgtaatttcaaattcctcc 42605926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 10171522 - 10171383
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||          ||||||||||||||| |||||||| ||||| |    
T  10171522 agggtaaataccgcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaactatttagattttgtccctgtaattttagattct 10171423  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatct 216  Q
    | |||||||    |||| || ||||| |||||||||||||    
T  10171422 ttcacttttggtccctcattccatcatgtcagcagaatct 10171383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 80 - 251
Target Start/End: Complemental strand, 42113361 - 42113189
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    |||||||||||| ||||||||||||| |||||||| |||||| ||||||||||  ||||          | ||||||| ||||| | |||||||| |||     
T  42113361 aagggtaaatacatcttttcgtccctgtaatattaacgaatttcggttttagttcctgtaaaaaaa---aattagattatgtccctttaatttcaaattc 42113265  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||||    ||||||||||||| ||||||| | ||||||||||||  ||||||||||||||| ||||||||    
T  42113264 ttccacttttgatccctcctttcatcatgtcagcaaattctgcataaattatgtccctgtaatttcatattcctcc 42113189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 248
Target Start/End: Complemental strand, 21144816 - 21144713
Alignment:
Q  149 atttagattttgtccatgtaatttcagatttttccacttttcctcc----tttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcaga 244  Q
    ||||||||||||||| ||||||||||||||  |||| ||||| |||    ||| | ||||||||||||||||||||||||| |||||||||||||| |||    
T  21144816 atttagattttgtccttgtaatttcagattcctccatttttcgtcccttatttaaccacgtcagcagaatctgcataaattacgtccctgtaatttgaga 21144717  T
Q  245 ttcc 248  Q
    ||||    
T  21144716 ttcc 21144713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 26532778 - 26532926
Alignment:
Q  78 taaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnn-gatttagattttgtccatgtaatttcaga 176  Q
    ||||||||||||||||| |||| |   |||||||||||||||||||||||||||||  |||          |||||||||||||||| |||||||||| |    
T  26532778 taaagggtaaatacctcatttcatatatataatattagcgaattccggttttagtccatgtaaaaaaaaaagatttagattttgtccctgtaatttcaaa 26532877  T
Q  177 tttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||||||||||||    |||| || || |||||||||||||||||||||    
T  26532878 tttttccacttttgatccctcattccaccacgtcagcagaatctgcata 26532926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 18044205 - 18044154
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18044205 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtc 18044154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 42112993 - 42113127
Alignment:
Q  90 acctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttccactttt 189  Q
    |||||||||||||||| |||||||||||||||||| |||||||| ||||         |||||||||| ||||| |||||||| ||||| || |||||||    
T  42112993 acctcttttcgtccctgtaatattagcgaattccgattttagtccctgt-aaaaaaaagatttagattatgtccctgtaatttaagattctttcactttt 42113091  T
Q  190 ----cctcctttcatcacgtcagcagaatctgcata 221  Q
        |||| ||||| |||||||||||||||||||||    
T  42113092 ggtccctcatttcaccacgtcagcagaatctgcata 42113127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 43851968 - 43851869
Alignment:
Q  156 ttttgtccatgtaatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||  |||||||  ||||| ||||||||||    ||||||||||||||||||||| ||| ||||| |||| ||||| |||||||||||||||||||    
T  43851968 ttttgtctctgtaattcaagattcttccactttttgtccctcctttcatcacgtcagcaaaatttgcatcaattacgtccttgtaatttcagattcctcc 43851869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 189
Target Start/End: Complemental strand, 42606132 - 42606024
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    |||||||||| ||||||| |||||| |||||||||||||||| ||||||||||  |||         ||||||||||||||||  ||||||||| ||| |    
T  42606132 agggtaaatatctctttttgtccctgtaatattagcgaattctggttttagtcaatgtaaaaaaaaagatttagattttgtccccgtaatttcaaattct 42606033  T
Q  181 tccactttt 189  Q
    |||||||||    
T  42606032 tccactttt 42606024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 14767573 - 14767650
Alignment:
Q  148 gatttagattttgtccatgtaatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||||||||||||||| |||||||||||||||||||||||||    |||  || || |||||||||||||||||||||    
T  14767573 gatttagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatctgcata 14767650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 218
Target Start/End: Original strand, 17622889 - 17623027
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||| | ||||||||||||||| | ||||||||| ||||         |||||||||||||| | |||||||| ||||| |    
T  17622889 agggtaaatacctcttttcgtccttgtaatattagcgaatttcagttttagtccctgt--aaaaaaagatttagattttgttc-tgtaattttagattct 17622985  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgc 218  Q
    |||||||||    |||| || || ||||||||||||||||||    
T  17622986 tccacttttggtccctcattccaccacgtcagcagaatctgc 17623027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 221
Target Start/End: Original strand, 30789519 - 30789650
Alignment:
Q  93 tcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttccactttt--- 189  Q
    ||||||||||||| |||||||||||||||||| |||||||| ||||         |||||||||||||||  ||||||||||||||  |||||||||       
T  30789519 tcttttcgtccctgtaatattagcgaattccgattttagtccctgt-aaaaaaaagatttagattttgtctctgtaatttcagattcctccacttttgat 30789617  T
Q  190 -cctcctttcatcacgtcagcagaatctgcata 221  Q
     |||| ||||| ||||| |||| ||||||||||    
T  30789618 ccctcatttcaccacgttagcaaaatctgcata 30789650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 20877126 - 20877072
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    ||||||| |||||||||||| |||||| |||||| ||||||||||||||||||||    
T  20877126 aaagggttaatacctcttttggtccctgtaatatgagcgaattccggttttagtc 20877072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 35367409 - 35367458
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggtttta 130  Q
    |||||||||||||||||| ||||||  |||||||||||||||||||||||    
T  35367409 agggtaaatacctcttttggtccctgcaatattagcgaattccggtttta 35367458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 221
Target Start/End: Complemental strand, 26137065 - 26136920
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctct-gtnnnnnnnnngatttagattttgtccatgtaatttcagat 177  Q
    |||||||||||||| |||||||||||| ||||||||| ||||| | ||||||||| || ||          | ||||||||||||| |||||||||||||    
T  26137065 aaagggtaaataccacttttcgtccctgtaatattagtgaatttcagttttagtccctagtaaaaaaaa--aattagattttgtccctgtaatttcagat 26136968  T
Q  178 ttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    | ||||||||||    |||| || || ||||| |||||||||||||||    
T  26136967 tcttccacttttggtccctcattccaccacgtaagcagaatctgcata 26136920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 1949651 - 1949702
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagt 132  Q
    ||||| |||||||||||| |||||| |||||| | |||||||||||||||||    
T  1949651 agggttaatacctcttttggtccctgtaatatgatcgaattccggttttagt 1949702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 39888486 - 39888537
Alignment:
Q  87 aatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    |||||||||||| ||||||||||||| |||||| | ||||||||||| ||||    
T  39888486 aatacctcttttggtccctataatataagcgaaattcggttttagtccctgt 39888537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 188
Target Start/End: Original strand, 38726755 - 38726793
Alignment:
Q  150 tttagattttgtccatgtaatttcagatttttccacttt 188  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  38726755 tttagattttgtccttgtaatttcagattcttccacttt 38726793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 40487793 - 40487736
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    ||||| |||||| ||||| |||| | ||||||||||||||||| ||||||||| ||||    
T  40487793 agggttaataccacttttggtccttgtaatattagcgaattccagttttagtccctgt 40487736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 14767505 - 14767557
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    ||||| ||||||||||||| || || |||||||||||||||  ||||||||||    
T  14767505 agggttaatacctcttttcatctctgtaatattagcgaattttggttttagtc 14767557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 20875697 - 20875749
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    ||||| |||||||||||| |||||| |||||| ||| |||| |||||||||||    
T  20875697 agggttaatacctcttttggtccctgtaatatgagcaaatttcggttttagtc 20875749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 3e-51; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 14411696 - 14411870
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||         |||||| |||||||| ||||||||||||||| |    
T  14411696 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtataaaaaaagatttatattttgtctatgtaatttcagattct 14411795  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||||    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  14411796 tccacttttggtccctcctttcatcacgtcagcagaatttgcataaattacgtccctgtaatttcagattcctcc 14411870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 7126296 - 7126122
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||         |||||||||||||||| |||||||||| ||| |    
T  7126296 agggtaaatacctcttttcatccctgtaatattagcgaattccggttttagtctttgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 7126197  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||||    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  7126196 tccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcatattcctcc 7126122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 31800018 - 31799845
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||         ||||||||||||||||||||||||||||||| |    
T  31800018 agggaaaatacctcttttcgtccctataatattagcgaattccggttttagtc-ctgtaaaaaaaaagatttagattttgtccatgtaatttcagattct 31799920  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||| |||||    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||    
T  31799919 tcctcttttgatccctcctttcatcacgtcagcagaatttgcataaattacgtccctttaatttcagattcctcc 31799845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 79 - 249
Target Start/End: Original strand, 14143899 - 14144072
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||         |||||||||||||||| |||||||||| |||    
T  14143899 aaagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcatatt 14143997  T
Q  179 tttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcct 249  Q
     ||||||||||    |||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  14143998 cttccacttttggtacctcatttcatcacgtcagtagaatctgcataaattacgtccctgtaatttcagattcct 14144072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 78 - 251
Target Start/End: Original strand, 17762279 - 17762455
Alignment:
Q  78 taaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagat 177  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||         |||||| ||||||| | |||||||||||||    
T  17762279 taaagggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-gatttatattttgttcctgtaatttcagat 17762377  T
Q  178 ttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    | ||||||||||    |||||||| ||||||| ||||||||||||||||||| |||||||||||||||| ||||||||    
T  17762378 tcttccacttttggtccctcctttaatcacgtaagcagaatctgcataaattacgtccctgtaatttcatattcctcc 17762455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 24837547 - 24837375
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||         |||||||||||||||| |||||||||| ||| ||    
T  24837547 gggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 24837448  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctc 250  Q
    | ||||||    ||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  24837447 ctacttttgctccctcctttcatcaagtcaacagaatctgcataaattacgtccttgtaatttcagattcctc 24837375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 82 - 247
Target Start/End: Original strand, 18336467 - 18336637
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnn-gatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||          |||||||||||||||| |||||||||||||| |    
T  18336467 gggtaaatatctcttttcgtccctataatattagcgaattccgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 18336566  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattc 247  Q
    ||| |||||    |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||    
T  18336567 tccgcttttgatccctcctttcatcacatcagcagaatttgcataaattacgtccctgtaatttcagattc 18336637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 24074302 - 24074472
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||| | ||||||||||||||| ||||||||||| ||||          ||||||||||||||  |||||||||| ||| |    
T  24074302 agggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatatttagattttgtctctgtaatttcatattct 24074401  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattc 247  Q
    |||||||||    |||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||    
T  24074402 tccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccccataatttcagattc 24074472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 251
Target Start/End: Original strand, 29444810 - 29444979
Alignment:
Q  86 aaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttccac 185  Q
    ||||| |||||||||||||| |||||||| ||||||| | |||||||| ||||         |||||||||| ||||| |||||||||| ||| ||| ||    
T  29444810 aaatatctcttttcgtccctgtaatattaacgaattctgattttagtccctgtaaaaaaaaggatttagattatgtccttgtaatttcatattcttctac 29444909  T
Q  186 tttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29444910 ttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcc 29444979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 82 - 221
Target Start/End: Complemental strand, 23979279 - 23979136
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||         |||||||||||||||| |||||||||| ||| ||    
T  23979279 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 23979180  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||    |||| ||||| |||||||||||||||||||||    
T  23979179 ccacttttggtccctcatttcaccacgtcagcagaatctgcata 23979136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 80 - 251
Target Start/End: Complemental strand, 20709591 - 20709417
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    |||||| ||||||||||||||||| | |||||||| ||||||  |||||||||| ||||         ||||||||||||||||||||||||||| |||     
T  20709591 aagggttaatacctcttttcgtccatgtaatattaacgaattttggttttagtccctgtaaaaaaaa-gatttagattttgtccatgtaatttcatattc 20709493  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||||    | |||||||||||| |||||||||| |||||||||| | |||||||||||||||||||||||    
T  20709492 ttccactttttgtccttcctttcatcacatcagcagaatatgcataaattacatccctgtaatttcagattcctcc 20709417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 24651078 - 24650904
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||  |||          || |||||||| ||| |||||||| ||||| |    
T  24651078 agggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccatgtaaaaaagaaaatctagattttatccctgtaattttagattct 24650979  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||||    |||||||||||||||||||||||||| ||||||||| | |||||||||||||| ||| ||||    
T  24650978 tccacttttgatccctcctttcatcacgtcagcagaatccgcataaattacatccctgtaatttcatatttctcc 24650904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 87 - 251
Target Start/End: Complemental strand, 27159327 - 27159162
Alignment:
Q  87 aatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttccact 186  Q
    ||||||||||||||||| | ||||||||||||||| |||||||||||  |||          ||||||||||||||| |||||||| | ||| ||||| |    
T  27159327 aatacctcttttcgtccttgtaatattagcgaatttcggttttagtccttgtaaaaaaa---atttagattttgtccctgtaattttatattcttccatt 27159231  T
Q  187 ttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||    ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27159230 tttggtcccttctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcc 27159162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 251
Target Start/End: Complemental strand, 994123 - 993951
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||||||| |||| |||||  ||||| ||||||||| ||||||||||| ||||         |||||||||||||||| ||||||| |||||| ||    
T  994123 gggtaaatacctttttt-gtccccgtaataatagcgaatttcggttttagtccctgtagaataaaagatttagattttgtccctgtaattgcagattctt 994025  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||    |||||||| |||| |||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  994024 ccacttttggtccctccttttatcatgtcaacagaatctgtataaattacgtccctgtaatttcagattcctcc 993951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 221
Target Start/End: Original strand, 6817121 - 6817265
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||         |||||||||| ||||||||||||||||||||     
T  6817121 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaa-gatttagattatgtccatgtaatttcagattc 6817219  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||||    |||| ||||| |||||||||||||||||||||    
T  6817220 ttccacttttggtccctcatttcaccacgtcagcagaatctgcata 6817265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 31799640 - 31799747
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||         |||||||||||||||| |||||||||||||| ||    
T  31799640 gggtaaatacctcttttcgtccctataatattagcgaattccggtttcagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 31799739  T
Q  182 ccactttt 189  Q
    ||||||||    
T  31799740 ccactttt 31799747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 83 - 252
Target Start/End: Complemental strand, 4919366 - 4919194
Alignment:
Q  83 ggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttc 182  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||||||  ||||          ||| ||||||||||| |||||||||||||| |||    
T  4919366 ggtaaatacctcttttcgtctctggaatattagcgaattccggttttagttcctgtaaaaaaaaaaatt-agattttgtccctgtaatttcagattcttc 4919268  T
Q  183 cactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcca 252  Q
     ||||||    ||||||||||||| |||| |||||| |||||||||| ||||| |||||||||| |||||||||    
T  4919267 tacttttgatccctcctttcatcaagtcaacagaatatgcataaattacgtccttgtaatttcatattcctcca 4919194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 251
Target Start/End: Complemental strand, 41001729 - 41001558
Alignment:
Q  83 ggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttc 182  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||  |||         |||||||||||||||| | |||||||||||| |||    
T  41001729 ggtaaataccttttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaa-gatttagattttgtccctataatttcagattcttc 41001631  T
Q  183 cactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||    ||||||||||||| |||| ||||| || ||||||||  ||| |||||||||||  |||||||    
T  41001630 cacttttggtccctcctttcatcaagtcaacagaacctacataaattatgtcactgtaatttcatcttcctcc 41001558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 251
Target Start/End: Complemental strand, 6817432 - 6817326
Alignment:
Q  149 atttagattttgtccatgtaatttcagatttttccacttttc----ctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcaga 244  Q
    ||||||||||||||| |||||||||| ||| ||||||||||     ||||||||||||| |||||||||| |||||||||| |||||||||||||||| |    
T  6817432 atttagattttgtccctgtaatttcatattcttccacttttggtcactcctttcatcacatcagcagaatatgcataaattacgtccctgtaatttcaaa 6817333  T
Q  245 ttcctcc 251  Q
    |||||||    
T  6817332 ttcctcc 6817326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 189
Target Start/End: Original strand, 24837168 - 24837276
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||         |||||||||||||||| |||||||||| ||| |    
T  24837168 agggtaaatacctcttttcgtccctgtaataatagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattct 24837267  T
Q  181 tccactttt 189  Q
    |||||||||    
T  24837268 tccactttt 24837276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 18336833 - 18336727
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||         |||||||||||||||| |||||||||||||| ||    
T  18336833 gggtaaatacctcttttcgtccctgtaa-attagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 18336735  T
Q  182 ccactttt 189  Q
    ||||||||    
T  18336734 ccactttt 18336727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 29445185 - 29445077
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    |||||| |||| |||||||||||||| ||||||||||||||||| ||||||||| ||||         |||||||||||||||| ||||||||||||||     
T  29445185 aagggttaatatctcttttcgtccctgtaatattagcgaattccagttttagtc-ctgtaaaaaaaaagatttagattttgtccttgtaatttcagattc 29445087  T
Q  180 ttccactttt 189  Q
    ||||||||||    
T  29445086 ttccactttt 29445077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 30512284 - 30512430
Alignment:
Q  78 taaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagat 177  Q
    ||||||||||||| |||||||||||||| ||||||||| |||||  |||||||||| ||||         ||||||||||| |||| |||||||||||||    
T  30512284 taaagggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgt-aaaaaaaggatttagatttggtccctgtaatttcagat 30512382  T
Q  178 ttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||||||    |||| || || ||||| |||||||||||||||    
T  30512383 ttttccacttttggtccctcattccaccacgtaagcagaatctgcata 30512430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 30552624 - 30552770
Alignment:
Q  78 taaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagat 177  Q
    ||||||||||||| |||||||||||||| ||||||||| |||||  |||||||||| ||||         ||||||||||| |||| |||||||||||||    
T  30552624 taaagggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgt-aaaaaaaggatttagatttggtccctgtaatttcagat 30552722  T
Q  178 ttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||||||    |||| || || ||||| |||||||||||||||    
T  30552723 ttttccacttttggtccctcattccaccacgtaagcagaatctgcata 30552770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 189
Target Start/End: Complemental strand, 17762661 - 17762553
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||||| || ||||||||||||| |||||||||| ||||         ||||||||||||||||   |||||||||||| |    
T  17762661 agggtaaatacctcttttcgtccctgtagtattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccataatttcagattct 17762562  T
Q  181 tccactttt 189  Q
    |||||||||    
T  17762561 tccactttt 17762553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 221
Target Start/End: Original strand, 7125923 - 7126060
Alignment:
Q  87 aatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttccact 186  Q
    ||||||||||||||| ||| |||||||||||||||||| |||||||| ||||         |||||||||||||||| | |||||||||||| |||||||    
T  7125923 aatacctcttttcgttcctgtaatattagcgaattccgattttagtccctgt-aaaaaaaagatttagattttgtccctataatttcagattcttccact 7126021  T
Q  187 ttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||    |||  || || |||||||||||||||||||||    
T  7126022 tttggtcccttattccaccacgtcagcagaatctgcata 7126060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 189
Target Start/End: Complemental strand, 14144280 - 14144172
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||| |||||||||||||||| || |||||||| ||||||||| |||||||| ||||         |||||||||||||||| |||||||||| ||| |    
T  14144280 agggttaatacctcttttcgtcactgtaatattaacgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattct 14144181  T
Q  181 tccactttt 189  Q
    |||||||||    
T  14144180 tccactttt 14144172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 189
Target Start/End: Original strand, 27158988 - 27159097
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||| ||||||||||||||||| | ||||||||||||||| | ||||||||||| ||         |||||| ||||||||| ||||||||||||||    
T  27158988 aaagggttaatacctcttttcgtccatgtaatattagcgaatttcagttttagtctcagt-taaaaaaagatttaaattttgtccctgtaatttcagatt 27159086  T
Q  179 tttccactttt 189  Q
     ||||||||||    
T  27159087 cttccactttt 27159097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 14412044 - 14411941
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||| || ||||||||||| |||||| ||||||||||| ||||          ||||||||||||||| |||||||||||||| |    
T  14412044 agggtaaatacctcttttcatctctataatattaacgaatttcggttttagtccctgtaaaaaaaaa-atttagattttgtccttgtaatttcagattct 14411946  T
Q  181 tccac 185  Q
    |||||    
T  14411945 tccac 14411941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 993751 - 993806
Alignment:
Q  83 ggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    ||||||||| |||||||||| || ||||||||||||||||||||||||||| ||||    
T  993751 ggtaaatacttcttttcgtctctgtaatattagcgaattccggttttagtccctgt 993806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 22571386 - 22571282
Alignment:
Q  151 ttagattttgtccatgtaatttcagatttttccacttttcctcc----tttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagatt 246  Q
    ||||||||||| |||||||||||| ||| |||   |||| ||||    ||||| ||||||| || |||||||||||||| ||||||||||||||||| ||    
T  22571386 ttagattttgttcatgtaatttcaaattcttctcgttttgctccctcatttcaccacgtcaacaaaatctgcataaattacgtccctgtaatttcaggtt 22571287  T
Q  247 cctcc 251  Q
    |||||    
T  22571286 cctcc 22571282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 189
Target Start/End: Original strand, 4918988 - 4919097
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt-nnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    ||||||||||||||||||| || || ||||||||||||||| ||||||||||  ||||          |||||||||||||||| |||||||||| |||     
T  4918988 agggtaaatacctcttttcatctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattc 4919087  T
Q  180 ttccactttt 189  Q
    ||||||||||    
T  4919088 ttccactttt 4919097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 20709205 - 20709355
Alignment:
Q  81 agggtaaatacctcttttcgtccct----ataatattagcgaattccggttttagtctctgtnnnnnnnnn--gatttagattttgtccatgtaatttca 174  Q
    ||||||||||||||||||||||| |    |||||||||| |||||||||||||||||  |||           |||||||||| ||||| ||||||||||    
T  20709205 agggtaaatacctcttttcgtccgtccttataatattagtgaattccggttttagtccatgtgaaaaaaaaaagatttagattctgtccctgtaatttca 20709304  T
Q  175 gatttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
     ||| ||||||||||    |||| ||||| |||||||||||||||||||||    
T  20709305 aattcttccacttttggtccctcatttcaccacgtcagcagaatctgcata 20709355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 189
Target Start/End: Original strand, 24650704 - 24650807
Alignment:
Q  84 gtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttcc 183  Q
    |||||||||||||||||||||| |||||||| |||||| |||||||| ||| |||         |||||||||||||| | |||||||||| ||| ||||    
T  24650704 gtaaatacctcttttcgtccctgtaatattaacgaatttcggttttaatctatgt--aaaaaaagatttagattttgttcctgtaatttcatattcttcc 24650801  T
Q  184 actttt 189  Q
    ||||||    
T  24650802 actttt 24650807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 24074614 - 24074537
Alignment:
Q  148 gatttagattttgtccatgtaatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||||||||||||||| |||||||||| ||| ||||||||||    |||  ||| | |||||||||||||||||||||    
T  24074614 gatttagattttgtccttgtaatttcatattcttccacttttggtcccttatttaaccacgtcagcagaatctgcata 24074537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 255
Target Start/End: Original strand, 18336635 - 18336665
Alignment:
Q  225 ttcgtccctgtaatttcagattcctccactt 255  Q
    |||||||||||||||||||||||||||||||    
T  18336635 ttcgtccctgtaatttcagattcctccactt 18336665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 20947121 - 20947075
Alignment:
Q  209 cagaatctgcataaatttcgtccctgtaatttcagattcctccactt 255  Q
    ||||||||||||||||| | ||  |||||||||||||||||||||||    
T  20947121 cagaatctgcataaattacctcaatgtaatttcagattcctccactt 20947075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 41001370 - 41001412
Alignment:
Q  96 tttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    |||||||||| ||||||||||||||| ||||||||||| ||||    
T  41001370 tttcgtccctgtaatattagcgaatttcggttttagtccctgt 41001412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 28071878 - 28071825
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    |||||| |||||| ||||| |||||| |||||| |||||||| |||||||||||    
T  28071878 aagggttaataccccttttggtccctgtaatatgagcgaatttcggttttagtc 28071825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 1e-50; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 80 - 249
Target Start/End: Complemental strand, 14262416 - 14262243
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||         |||||||||||||||| |||||||||| |||     
T  14262416 aagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattg 14262317  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcct 249  Q
    ||||||||||    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  14262316 ttccacttttagtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaattttagattcct 14262243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 79 - 251
Target Start/End: Original strand, 16721988 - 16722164
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||          ||||||||||||||||||||||||||||||    
T  16721988 aaagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaatttagattttgtccatgtaatttcagatt 16722087  T
Q  179 tttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
     ||||||||||    ||| ||||||||| |||| |||||||||||||||||  ||| ||||||||||||||||||||    
T  16722088 cttccacttttggtcccttctttcatcaagtcaacagaatctgcataaattatgtcactgtaatttcagattcctcc 16722164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 79 - 251
Target Start/End: Original strand, 45969912 - 45970088
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||         |||||||||||||||| ||||||||||||||    
T  45969912 aaagggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagatt 45970011  T
Q  179 tttccacttttc----ctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
     || |||||||     |||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||    
T  45970012 ctttcacttttggtctctcctttcatcaagtcaacagaatctgcataaattacgtccctgtaatttcagattcctcc 45970088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 82 - 251
Target Start/End: Original strand, 5800605 - 5800778
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||||||||| ||||         |||||||||| ||||| |||||||||| ||| ||    
T  5800605 gggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattctt 5800704  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||| ||||    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5800705 ccatttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcc 5800778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 82 - 251
Target Start/End: Complemental strand, 19113143 - 19112970
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||         |||||||||||| ||| |||||||||||||| ||    
T  19113143 gggtaaatacctcttttcgtccctataatattaacgaattccggttttagtccctgtaaaaaaaaagatttagattttatccctgtaatttcagattctt 19113044  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    | ||||||    ||||||||||||| |||| ||||||||||||||||| ||||| |||||||||||||||||||    
T  19113043 ctacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccttgtaatttcagattcctcc 19112970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 14171965 - 14171791
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||         |||||||||||||||| ||||||||| |||| |    
T  14171965 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttctgattct 14171866  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||||    | ||||||||||||||||||| ||||||||| |||| || || |||||||||||||||||||    
T  14171865 tccacttttggtccttcctttcatcacgtcagcaaaatctgcatcaattacgaccttgtaatttcagattcctcc 14171791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 82 - 251
Target Start/End: Original strand, 14161871 - 14162044
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||| |||||||||||||| ||||||||||||||||| ||||||||  || |         |||||||||| ||||| |||||||||| ||| ||    
T  14161871 gggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctataaaaaaaaagatttagattatgtccctgtaatttcatattctt 14161970  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14161971 ccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcc 14162044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 251
Target Start/End: Complemental strand, 52553065 - 52552893
Alignment:
Q  83 ggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttc 182  Q
    ||||||||| ||||||||||| | ||||||||||||||||  ||||||||| ||||         |||||||||||||||  |||||||||| ||| |||    
T  52553065 ggtaaatacatcttttcgtccttgtaatattagcgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcatattcttc 52552966  T
Q  183 cactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  52552965 cacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcc 52552893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 80 - 251
Target Start/End: Complemental strand, 30500420 - 30500246
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||          ||||||||||||||| |||||||||| |||     
T  30500420 aagggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaa-atttagattttgtccctgtaatttcatattg 30500322  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||||    ||||||||||||||||||||| ||||| |||||||| | |||||||||||||||||||||||    
T  30500321 ttccacttttggtccctcctttcatcacgtcagcaaaatctacataaattacatccctgtaatttcagattcctcc 30500246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 33372405 - 33372579
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    |||||||||| |||||||||||||| |||||||||||||||| |||||||||  ||||         |||||||||||||||| |||||||||||||| |    
T  33372405 agggtaaatatctcttttcgtccctgtaatattagcgaattctggttttagttcctgtaaataaaaagatttagattttgtccctgtaatttcagattat 33372504  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||||    ||||||||||||||||||||| ||||||||| ||||  |||| |||||||||||||||||||    
T  33372505 tccacttttggtccctcctttcatcacgtcagcaaaatctgcatcaattaagtccttgtaatttcagattcctcc 33372579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 82 - 251
Target Start/End: Original strand, 45003496 - 45003669
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||| |||||||||||||  |||||||||| ||||||||||| |||| || |         |||||||||||||||| |||||||||||||| ||    
T  45003496 gggtaaatatctcttttcgtccccgtaatattagcaaattccggtttcagtccctataaaataaaagatttagattttgtccctgtaatttcagattctt 45003595  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||    |||||||||||||||||| ||||||||| ||||||| ||||| |||||||||||||||||||    
T  45003596 ccactttttgtccctcctttcatcacgtcaacagaatctgtataaattacgtccttgtaatttcagattcctcc 45003669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 20854074 - 20853901
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    |||||||||| |||||||||||| | ||||||||||||||| ||||||||||| ||||         |||||||||||||||| |||||||||||||| |    
T  20854074 agggtaaatatctcttttcgtccatgtaatattagcgaatttcggttttagtc-ctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 20853976  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||||    ||||||||||||| |||| || ||||||||||||||  ||| ||||||||||||||||||||    
T  20853975 tccacttttggtccctcctttcatcaagtcaacataatctgcataaattatgtcactgtaatttcagattcctcc 20853901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 78 - 251
Target Start/End: Original strand, 21632897 - 21633069
Alignment:
Q  78 taaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagat 177  Q
    |||||||||||||||||||||||||||| |||||||||||||||     ||||||| ||||         ||| ||||| |||||| |||||||||||||    
T  21632897 taaagggtaaatacctcttttcgtccctgtaatattagcgaatt-----tttagtccctgtaaaaaaaaagatctagatgttgtccctgtaatttcagat 21632991  T
Q  178 ttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    | || |||||||    ||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||    
T  21632992 tctttcacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccctgtaatttcagattcctcc 21633069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 251
Target Start/End: Original strand, 11003722 - 11003905
Alignment:
Q  71 aaaatattaaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaat 170  Q
    |||||||||| ||||||||||||||||| |||| | |||||||| |||||||||||||||||| ||||         || ||||||||||||| ||||||    
T  11003722 aaaatattaa-gggtaaatacctctttttgtccttgtaatattaccgaattccggttttagtccctgtaaataaaaagacttagattttgtccttgtaat 11003820  T
Q  171 ttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||| ||||||||||    | ||||||||||| |||| || ||| ||||| |||| |||||||||||||||||||||||||    
T  11003821 ttcagattcttccacttttggtccatcctttcatcaagtcaacaaaatatgcatcaattacgtccctgtaatttcagattcctcc 11003905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 79 - 221
Target Start/End: Original strand, 9266972 - 9267118
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||         |||||||||||||||| |||||||||| |||    
T  9266972 aaagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatatt 9267071  T
Q  179 tttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
     ||||||||||    |||| || || ||||| |||||||||||||||    
T  9267072 cttccacttttggtccctcattccagcacgtaagcagaatctgcata 9267118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 9267353 - 9267180
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||| | |||||||||||||||||| |||||||| ||||           |||||||||||||| |||||| ||||||| |    
T  9267353 agggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgtatataaattt-tttagattttgtccctgtaatatcagattct 9267255  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    || ||||||    ||||||||||||| |||| |||||||||||||||||  |||| |||||||||||||||||||    
T  9267254 tctacttttggtccctcctttcatcaagtcaacagaatctgcataaattaagtccttgtaatttcagattcctcc 9267180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 81 - 250
Target Start/End: Original strand, 49986526 - 49986700
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt-nnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||          |||||||||||||||| ||||||||||||||     
T  49986526 agggtaaatacctcttttcgtccctgtaatattagagaattccggttttagtcactgtaaaaaaaaaagatttagattttgtccctgtaatttcagattc 49986625  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctc 250  Q
    ||| ||||||     ||||||||||||  | |  |||||||||||||||| ||||| ||||||||||||||||||    
T  49986626 ttctacttttggtctctcctttcatcaatttaatagaatctgcataaattacgtccttgtaatttcagattcctc 49986700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 43572388 - 43572564
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||| ||||||||| ||| ||||||||||||||| ||||||||||| ||||          ||||||||||||||| |||||||||||||| |    
T  43572388 agggtaaatacatcttttcgttcctgtaatattagcgaatttcggttttagtccctgtaaaaagaaaaatttagattttgtccctgtaatttcagattct 43572487  T
Q  181 tccactttt----cctcctt---tcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||||    |||||||   |||||| ||||||||||||||||  |||| |||||||||||||||| ||||||||    
T  43572488 tccacttttggtccctcctttcatcatcaagtcagcagaatctgca-caattacgtccctgtaatttcatattcctcc 43572564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 85 - 251
Target Start/End: Original strand, 38283553 - 38283723
Alignment:
Q  85 taaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttcca 184  Q
    |||||| |||||||| ||||| |||||||| ||||||||||||||||||  |||          ||||||||||||| | | |||||||| ||| |||||    
T  38283553 taaatatctcttttcatccctgtaatattaacgaattccggttttagtccttgtaaaaaaaaaaatttagattttgttcctataatttcatattgttcca 38283652  T
Q  185 ctttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||    ||||||||||||||||||||||||||| ||||| || |||||||||||||| ||||||||||    
T  38283653 cttttgatccctcctttcatcacgtcagcagaatctacataagttacgtccctgtaatttaagattcctcc 38283723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 251
Target Start/End: Original strand, 15328457 - 15328633
Alignment:
Q  76 attaaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcag 175  Q
    ||||| |||||||||||||||||||| ||| |||||||||  |||| || |||||||| ||||          | ||||||||||||| ||||||||||     
T  15328457 attaatgggtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgtaaaaaaa---aattagattttgtccctgtaatttcat 15328553  T
Q  176 atttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||| ||||| |||     |||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  15328554 attcttccagtttgtgtccctcttttcatcacgtcaacagaatctgcataaattacgtccctgtaatttcagattcctcc 15328633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 251
Target Start/End: Complemental strand, 17465747 - 17465572
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    |||||||||||||||||||||||| | ||||||||||||||| | |||||| |||||||          ||||| ||||||||| ||||| || |||||     
T  17465747 aagggtaaatacctcttttcgtccttgtaatattagcgaatttcagttttaatctctgtaaaataaaatatttaaattttgtccctgtaactttagattc 17465648  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    || |||||||    |||||||||||||||||| || ||| | |||||||| |||| ||||||||||||||||||||    
T  17465647 tttcacttttggtccctcctttcatcacgtcaacaaaatttacataaattacgtctctgtaatttcagattcctcc 17465572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 244
Target Start/End: Complemental strand, 17649384 - 17649222
Alignment:
Q  85 taaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttcca 184  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||||  |||          |||||||||||||||| |||||||||||||| |||||    
T  17649384 taaatacctcttttcgaccctgtaatactagcgaattccggttttagttcctg-gaaaaaaaagatttagattttgtccctgtaatttcagattattcca 17649286  T
Q  185 cttttc----ctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcaga 244  Q
    | |||     ||||||| |||| |||| ||||||||||||||||| ||||||||||||||||||    
T  17649285 catttggtctctccttttatcaagtcaacagaatctgcataaattacgtccctgtaatttcaga 17649222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 35995677 - 35995821
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||           |||||||||||||| |||||||||||||| |    
T  35995677 agggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtccctgtagaattttttttttagattttgtccctgtaatttcagattct 35995776  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||||||||    |||| || || ||||| |||||||||||||||    
T  35995777 tccacttttggtccctcattccaccacgtaagcagaatctgcata 35995821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 79 - 251
Target Start/End: Complemental strand, 35996056 - 35995883
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||| |||||||| ||||          | ||||| ||||||   |||||||||||||    
T  35996056 aaagggtaaatacatcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaa---aattagaatttgtctcagtaatttcagatt 35995960  T
Q  179 tttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
     ||||||||||    ||| ||||||||||||| |||||||||||||||||| ||||| ||||  || ||||||||||    
T  35995959 cttccacttttggtcccttctttcatcacgtccgcagaatctgcataaattacgtccttgtatatttagattcctcc 35995883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 47575581 - 47575477
Alignment:
Q  151 ttagattttgtccatgtaatttcagatttttccacttttc----ctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagatt 246  Q
    ||||||||||||  |||||||||||||||||| ||||||     |||||||||||||||||||||||||||||||||||   |||||||||||||| |||    
T  47575581 ttagattttgtctctgtaatttcagatttttcaacttttggtctctcctttcatcacgtcagcagaatctgcataaattatatccctgtaatttcaaatt 47575482  T
Q  247 cctcc 251  Q
    |||||    
T  47575481 cctcc 47575477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 33372783 - 33372640
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||||  ||||||||||||||| || |||||||  ||||         |||||||||||||||| |||||||||||||| |    
T  33372783 agggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagttcctgttaaaaaaaagatttagattttgtccctgtaatttcagattct 33372684  T
Q  181 tccacttttcctcc---tttcatcacgtcagcagaatctgcata 221  Q
    |||||||||  |||   || || |||||||||||||||||||||    
T  33372683 tccacttttgatccccattccaccacgtcagcagaatctgcata 33372640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 79 - 221
Target Start/End: Original strand, 14171584 - 14171729
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| ||||| | |||||         |||||||||||||||| |||||||||| |||    
T  14171584 aaagggtaaataccacttttcgtccctgtaatattagcgaattccgattttaatttctgt-aaaaaaaagatttagattttgtccctgtaatttcaaatt 14171682  T
Q  179 tttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
     ||||||||||    |||| || || |||||||||||||||||||||    
T  14171683 cttccacttttgatccctcattccaccacgtcagcagaatctgcata 14171729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 189
Target Start/End: Complemental strand, 16722370 - 16722262
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||||| ||||||||||||||| | ||||||||| ||||         |||||||||||||||| |||||||||| ||| |    
T  16722370 agggtaaatacctcttttcgtccctgtaatattagcgaatttcagttttagtccctgtacaaaaaaagatttagattttgtccctgtaatttcatattct 16722271  T
Q  181 tccactttt 189  Q
    |||||||||    
T  16722270 tccactttt 16722262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 14162248 - 14162142
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||| |||||||||||| |||||| ||||||||||||||||||||||||||| ||||         |||||||||||||||| |||||||||||||| ||    
T  14162248 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaagagatttagattttgtccttgtaatttcagattctt 14162150  T
Q  182 ccactttt 189  Q
    ||||||||    
T  14162149 ccactttt 14162142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 79 - 189
Target Start/End: Original strand, 14262033 - 14262143
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||| |||| |||||||||||||| |||||||||||||||||||||||||||  |||          ||||||||||||||| ||||||||||||||    
T  14262033 aaagggttaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaatatttagattttgtccctgtaatttcagatt 14262132  T
Q  179 tttccactttt 189  Q
     ||||||||||    
T  14262133 cttccactttt 14262143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 19720333 - 19720425
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttca 174  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||         |||||||||||||||| ||||||||||    
T  19720333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttca 19720425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 5800982 - 5800876
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||| ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||         |||||||||||||||| |||||||||| ||| ||    
T  5800982 gggttaatacctcttttcgtccctgtaatattagcgaattccgg-tttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattctt 5800884  T
Q  182 ccactttt 189  Q
    ||||||||    
T  5800883 ccactttt 5800876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 30500039 - 30500184
Alignment:
Q  78 taaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagat 177  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||          ||||||||||||||| |||||||||| ||    
T  30500039 taaagggttaatacctcttttcatccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa--atttagattttgtccctgtaatttcatat 30500136  T
Q  178 ttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    | ||||||||||    |||  || || |||||||||||||||||||||    
T  30500137 tcttccacttttggtcccttattccaccacgtcagcagaatctgcata 30500184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 45970296 - 45970186
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt-nnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    |||||||||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||          |||||| ||||||||| ||||||||||||||    
T  45970296 aagggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttcagatt 45970197  T
Q  179 tttccactttt 189  Q
     ||||||||||    
T  45970196 cttccactttt 45970186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 81 - 189
Target Start/End: Original strand, 19112763 - 19112872
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt-nnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||          |||||||||||||||| || ||||||| |||     
T  19112763 agggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctggaatttcatattc 19112862  T
Q  180 ttccactttt 189  Q
    ||||||||||    
T  19112863 ttccactttt 19112872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 189
Target Start/End: Complemental strand, 21633275 - 21633167
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||| || |||||||| ||||||||||||||| | ||||||||| || |         |||||||||||||||| |||||||||||||| |    
T  21633275 agggtaaatacctattctcgtccctgtaatattagcgaatttcagttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattct 21633176  T
Q  181 tccactttt 189  Q
    |||||||||    
T  21633175 tccactttt 21633167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 27946244 - 27946187
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  27946244 agggtaaatacctcttttcgtcccagtaatattagcgaattccggttttagtccctgt 27946187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 20853692 - 20853743
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggtttta 130  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  20853692 aaagggtaaatacctcttttcgtccctgtaatattagcgaatttcggtttta 20853743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 224
Target Start/End: Complemental strand, 43572769 - 43572623
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||| ||||| |||||||  | |||||||||||||||  ||||          ||||||||| ||||| |||||||||||||| |    
T  43572769 agggtaaatacctcttttcatccctgtaatattgacaaattccggttttagttcctgtaaaaaaaaa-atttagattctgtccctgtaatttcagattct 43572671  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaat 224  Q
    |||||||||    |||| ||||| |||||||||||||||||| |||||    
T  43572670 tccacttttggtccctcatttcaccacgtcagcagaatctgcgtaaat 43572623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 4204709 - 4204851
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||| |||||||||||||||| ||||||||  ||||| | ||||||||  ||||         |||||||||| ||||| |||||||||||||| ||    
T  4204709 gggtaaagacctcttttcgtccctgtaatattaatgaatttcagttttagttcctgtaaaaaaaa-gatttagattatgtccctgtaatttcagattctt 4204807  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||    |||| ||||| |||||||||||||||||||||    
T  4204808 ccacttttggtccctcatttcaccacgtcagcagaatctgcata 4204851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 15328772 - 15328695
Alignment:
Q  148 gatttagattttgtccatgtaatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||||||||||||||| |||||||||||||||||||||||||    |||  || || |||||||||||||||||||||    
T  15328772 gatttagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatctgcata 15328695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 27946114 - 27946165
Alignment:
Q  87 aatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  27946114 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt 27946165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 38283861 - 38283785
Alignment:
Q  149 atttagattttgtccatgtaatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||||||||| | |||||||||||| ||||||||||    |||  |||||||||||||||||||||||||||    
T  38283861 atttagattttgtccctataatttcagattcttccacttttgatcccttatttcatcacgtcagcagaatctgcata 38283785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 49986907 - 49986856
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagt 132  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||    
T  49986907 agggtaaatacctcttttcgtcccagtaatattagcgaatttcggttttagt 49986856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 189
Target Start/End: Original strand, 52552695 - 52552799
Alignment:
Q  87 aatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnn--gatttagattttgtccatgtaatttcagatttttcca 184  Q
    |||| |||||||||||||| |||||||||| |||| || |||||||||||||           |||||||||||||||| |||||||||||||| |||||    
T  52552695 aatatctcttttcgtccctctaatattagcaaatttcgattttagtctctgtaaaaaaaaatagatttagattttgtccctgtaatttcagattcttcca 52552794  T
Q  185 ctttt 189  Q
    |||||    
T  52552795 ctttt 52552799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 4204999 - 4204913
Alignment:
Q  169 atttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||||| ||||||||||    |||| ||| |||||||||| |||||||||||||||| | ||| | |||||||||||||||||    
T  4204999 atttcagattcttccacttttgatccctctttttatcacgtcagtagaatctgcataaattacatccatataatttcagattcctcc 4204913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 3426027 - 3425975
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    ||||| |||||||||||| | |||| |||||||||||||||||||||||||||    
T  3426027 agggttaatacctcttttggcccctgtaatattagcgaattccggttttagtc 3425975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 35741966 - 35741906
Alignment:
Q  78 taaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    |||||||| |||||| ||||| |||||| ||||||||||||||||| ||||||||| ||||    
T  35741966 taaagggttaataccacttttggtccctgtaatattagcgaattccagttttagtccctgt 35741906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 3424772 - 3424830
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    |||||| |||||||||||| |||||| |||||||||||| |||||||||| ||| ||||    
T  3424772 aagggttaatacctcttttggtccctgtaatattagcgatttccggttttggtccctgt 3424830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 24490299 - 24490246
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    ||||||||||| || ||||| ||||| ||||||||| |||||||||||||||||    
T  24490299 aagggtaaatatcttttttcctccctgtaatattagtgaattccggttttagtc 24490246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 17465366 - 17465417
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagt 132  Q
    |||||||||||||||||| |||| | |||||||||||||||| | |||||||    
T  17465366 agggtaaatacctctttttgtccttttaatattagcgaattctgattttagt 17465417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 35740829 - 35740868
Alignment:
Q  94 cttttcgtccctataatattagcgaattccggttttagtc 133  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  35740829 cttttggtccctgtaatattagcgaattccggttttagtc 35740868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 45003874 - 45003823
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagt 132  Q
    ||||||||||  || |||||||||| ||||||||||||||| ||||||||||    
T  45003874 agggtaaatatatcgtttcgtccctgtaatattagcgaatttcggttttagt 45003823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 8648543 - 8648617
Alignment:
Q  2 gacaaaaactaaaattcttcttcctcactaagcgacatcacaacttttcgtttcagatactaattgtctaaaata 76  Q
    |||||||||| |||||||| ||||| ||||| | |||||||||||||| ||  ||  ||| ||||||||||||||    
T  8648543 gacaaaaactgaaattcttgttcctaactaaactacatcacaactttttgtcacaagtacaaattgtctaaaata 8648617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 36991043 - 36990981
Alignment:
Q  76 attaaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    |||| ||||| |||||  ||||| |||||| ||||||||||||||| ||||||||||| ||||    
T  36991043 attatagggttaatactacttttggtccctgtaatattagcgaatttcggttttagtccctgt 36990981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 37016483 - 37016421
Alignment:
Q  76 attaaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    |||| ||||| |||||  ||||| |||||| ||||||||||||||| ||||||||||| ||||    
T  37016483 attatagggttaatactacttttggtccctgtaatattagcgaatttcggttttagtccctgt 37016421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 15328840 - 15328788
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    ||||| ||||||||||||| || || |||||||||||||||  ||||||||||    
T  15328840 agggttaatacctcttttcatctctgtaatattagcgaattttggttttagtc 15328788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 6e-49; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 28218542 - 28218368
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||         |||||||||||||||| |||||||||||||| |    
T  28218542 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattct 28218443  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||||    |||||||||||||||||| || ||||||||| |||| |||||||||||||||||||||||||    
T  28218442 tccacttttggtccctcctttcatcacgtcaacaaaatctgcatcaattacgtccctgtaatttcagattcctcc 28218368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 80 - 251
Target Start/End: Complemental strand, 41600338 - 41600163
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||         |||||||||||||||| ||||||||||||||     
T  41600338 aagggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattc 41600239  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||||    ||||||||||||||||||||| ||||||||| |||| ||||| |||||||||||||||||||    
T  41600238 ttccacttttggtccctcctttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcagattcctcc 41600163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 81 - 255
Target Start/End: Complemental strand, 25772710 - 25772532
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    |||||||||| |||||||||||||||||||||||| ||||||| ||||||||| ||||         |||||||||||||||| |||||||||||||| |    
T  25772710 agggtaaatatctcttttcgtccctataatattagtgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 25772611  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctccactt 255  Q
    || ||||||    ||||||||||||| |||| ||||||||||||||||| ||||| |||||||||||||||||||||||    
T  25772610 tctacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccttgtaatttcagattcctccactt 25772532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 12006919 - 12006745
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||| | | |||||||||||||||||| |||||||| ||||         |||||||||||||||| |||||||||||||| |    
T  12006919 agggtaaatacctcttttcgttcatgtaatattagcgaattccgattttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattct 12006820  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||||    ||||||||||||||||||||| ||||||||| |||| ||||| |||||||||||||||||||    
T  12006819 tccacttttggtccctcctttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcagattcctcc 12006745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 86 - 251
Target Start/End: Complemental strand, 1250580 - 1250411
Alignment:
Q  86 aaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttccac 185  Q
    ||||| |||||||||||| | ||||||||||||||||| ||||||||||||||         |||||||||||||||| | |||||||| ||| ||||||    
T  1250580 aaatatctcttttcgtccttgtaatattagcgaattccagttttagtctctgtaaactaaaagatttagattttgtccctttaatttcatattcttccac 1250481  T
Q  186 tttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||    ||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||    
T  1250480 ttttggtccctcctttcatcacgtcagaagaatctgcataaattacgtccctgtaatttcaaattcctcc 1250411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 82 - 251
Target Start/End: Original strand, 23704662 - 23704834
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| || ||||         |||||| ||||||||| |||||||||||||| ||    
T  23704662 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttactcactgtaaaaaaaa-gatttacattttgtccctgtaatttcagattctt 23704760  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||    ||||||||||||| ||||  |||||||||||||||| | |||||||||||||||||||||||    
T  23704761 ccacttttggtccctcctttcatcaagtcaatagaatctgcataaattacttccctgtaatttcagattcctcc 23704834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 48672658 - 48672484
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||||||||| ||||         |||||||||||| ||| |||||||||||||| |    
T  48672658 agggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttatccctgtaatttcagattct 48672559  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||||    |||||||||||||||| |||| ||||||||| |||| ||||| |||||||||| ||||||||    
T  48672558 tccacttttggtccctcctttcatcacgttagcaaaatctgcatcaattacgtccttgtaatttcaaattcctcc 48672484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 76 - 251
Target Start/End: Complemental strand, 38880105 - 38879929
Alignment:
Q  76 attaaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcag 175  Q
    ||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||   |          ||||||||||||||| |||||||||||    
T  38880105 attaatgggtaaatacctcttttcgtccctgtaatattagcaaattccggttttagtct---ttaaaaaaaaaatttagattttgtccctgtaatttcag 38880009  T
Q  176 atttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||| ||||||||||    |||||||||| || |||| ||||||||||||||||| |||||||||||||||| ||||||||    
T  38880008 attcttccacttttggtccctcctttcaccaagtcaacagaatctgcataaattacgtccctgtaatttcatattcctcc 38879929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 20963872 - 20963700
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||          |||||||||| |||| |||||||||||||| |    
T  20963872 agggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaataaa-atttagatttagtccctgtaatttcagattct 20963774  T
Q  181 tccactttt---cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    | |||||||   |||||||||||||||||| || ||| |||||||||| |||||||||||||||| ||||||||    
T  20963773 ttcacttttggtcctcctttcatcacgtcaacataatttgcataaattacgtccctgtaatttcatattcctcc 20963700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 252
Target Start/End: Complemental strand, 48648603 - 48648433
Alignment:
Q  84 gtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttcc 183  Q
    |||||||| ||||||||||||  ||||||||||||||| || ||||||||||| |         ||||||||||||||| ||||||||| ||||| ||||    
T  48648603 gtaaatacttcttttcgtcccagtaatattagcgaatttcgattttagtctctataaaaaaa--gatttagattttgtctatgtaattttagattcttcc 48648506  T
Q  184 actttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcca 252  Q
    |||| |    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  48648505 acttctggtccctcctttcatcacgtcaacagaatctgcataaattacgtccctgtaatttcagattcctcca 48648433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 20459069 - 20458896
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||| |||  ||||         |||||||||||||||  |||||||||||||| |    
T  20459069 agggtaaatacctcttttcgtccctgtaatattagggaattccggttt-agtacctgtaaaaaaaaagatttagattttgtcactgtaatttcagattct 20458971  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||||    |||||||| |||| |||| |||||| |||||||||| |||||||||||||||||||||||||    
T  20458970 tccacttttggtccctcctttgatcaagtcaacagaatttgcataaattacgtccctgtaatttcagattcctcc 20458896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 82 - 251
Target Start/End: Complemental strand, 20419915 - 20419741
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnn-gatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||          |||||||||||||||| |||||||||||||| |    
T  20419915 gggtaaatacctctttttgtccctgtaatattaacgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 20419816  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    || ||||||    ||||||||||||| |||| || ||||| |||||||| ||||| |||||||||||||||||||    
T  20419815 tctacttttggtccctcctttcatcaagtcaacaaaatcttcataaattacgtccttgtaatttcagattcctcc 20419741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 82 - 251
Target Start/End: Original strand, 6465855 - 6466027
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||| || ||||||||| | ||||||||||||||||||||||||||| ||||          ||||||||| ||| | |||||||||||||| ||    
T  6465855 gggtaaatatcttttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaat-atttagattatgttcttgtaatttcagattctt 6465953  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||    ||||||||||||||||||| ||||||||||||||||  ||||||||||||||| ||||||||    
T  6465954 ccacttttggtccctcctttcatcacgtcagaagaatctgcataaattatgtccctgtaatttcaaattcctcc 6466027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 23383879 - 23383705
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||||| ||||||||| |||||| | |||||||| |||          |||||||||||||||| |||||||||| ||| |    
T  23383879 agggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtccctgaaaaaaaaaagatttagattttgtccctgtaatttcatattct 23383780  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||| |||    ||||||||||||| |||| ||||||||||||||| | ||||| |||||||| ||||||||||    
T  23383779 tccacctttggtccctcctttcatcaagtcaacagaatctgcataaactacgtccttgtaattttagattcctcc 23383705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 79 - 220
Target Start/End: Original strand, 28218175 - 28218321
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt-nnnnnnnnngatttagattttgtccatgtaatttcagat 177  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||          |||||||||||||||| |||||||||||||    
T  28218175 aaagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagat 28218274  T
Q  178 ttttccactttt----cctcctttcatcacgtcagcagaatctgcat 220  Q
    | ||||||||||    |||| || || ||||||||||||||||||||    
T  28218275 tcttccacttttggtccctcattccaccacgtcagcagaatctgcat 28218321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 221
Target Start/End: Original strand, 20419526 - 20419679
Alignment:
Q  72 aaatattaaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatt 171  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||         |||||||||||||||| |||||||    
T  20419526 aaatattattgggtaaatacctcttttcgtccctataatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatt 20419625  T
Q  172 tcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||| ||| ||||| ||||    |||| || || ||||| |||||||||||||||    
T  20419626 tcatattcttccatttttggtccctcattccaccacgtaagcagaatctgcata 20419679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 251
Target Start/End: Complemental strand, 7658342 - 7658174
Alignment:
Q  83 ggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttc 182  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||          |   ||||||||||| |||||||| ||||| |||    
T  7658342 ggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtctctgtaaaaaa----aaaaagattttgtccctgtaatttaagattcttc 7658247  T
Q  183 cacttttc----ctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||     |||||||||||||||||||| ||||||||||||||  ||||||||||||||| ||||||||    
T  7658246 cacttttggtctctcctttcatcacgtcagcaaaatctgcataaattatgtccctgtaatttcatattcctcc 7658174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 151 - 250
Target Start/End: Complemental strand, 31851548 - 31851445
Alignment:
Q  151 ttagattttgtccatgtaatttcagatttttccacttttc----ctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagatt 246  Q
    ||||||||||||| |||||||||| ||| ||||||||||     ||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||    
T  31851548 ttagattttgtccctgtaatttcatattcttccacttttggtctctcctttcatcacatcagcagaatatgcataaattacgtccctgtaatttcagatt 31851449  T
Q  247 cctc 250  Q
    ||||    
T  31851448 cctc 31851445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 23705039 - 23704896
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||         |||||||||||||||| |||||||||| ||| |    
T  23705039 agggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcatattct 23704941  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||||||||    |||| || || ||||| |||||||||||||||    
T  23704940 tccacttttggtccctcattccaccacgtaagcagaatctgcata 23704896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 10409440 - 10409547
Alignment:
Q  148 gatttagattttgtccatgtaatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcag 243  Q
    |||||||||||||||| |||||||||||||| ||| ||||||    ||| |||||||||| |||||| ||||||||| |||| ||||| |||||||||||    
T  10409440 gatttagattttgtccttgtaatttcagattcttctacttttagtcccttctttcatcacttcagcaaaatctgcatcaattacgtccttgtaatttcag 10409539  T
Q  244 attcctcc 251  Q
    ||||||||    
T  10409540 attcctcc 10409547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 12006540 - 12006683
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||          | ||||||||||||| |||||||||||||| |    
T  12006540 agggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaa-aattagattttgtccctgtaatttcagattct 12006638  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||||||||    |||| || || ||||| |||||||||||||||    
T  12006639 tccacttttgatccctcattccaccacgttagcagaatctgcata 12006683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 221
Target Start/End: Original strand, 25772362 - 25772506
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    |||||||||||||||||||||||||| ||||||||||||||| || ||||||| |||||         |||||||||||||||| |||||||||| |||     
T  25772362 aagggtaaatacctcttttcgtccctgtaatattagcgaatttcgattttagtttctgt-aaaaaaaagatttagattttgtccttgtaatttcatattc 25772460  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||||    |||| || || ||||| |||||||||||||||    
T  25772461 ttccacttttgttccctcattccaccacgtaagcagaatctgcata 25772506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 48672276 - 48672422
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt--nnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||           ||||||||||| |||  ||||||||||||||    
T  48672276 agggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtctctgtaaaaaaaaaaagatttagatttcgtctctgtaatttcagatt 48672375  T
Q  179 tttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
     ||||||||||    |||| || || |||||||||||||||||||||    
T  48672376 cttccacttttgatccctcattccaccacgtcagcagaatctgcata 48672422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 225
Target Start/End: Original strand, 16995200 - 16995346
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||||||||||||||| || ||||||||||||||| ||||||||||  ||||          ||||||||||||||| |||||||||||||| ||    
T  16995200 gggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaat-atttagattttgtccctgtaatttcagattctt 16995298  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatt 225  Q
    ||||||||    || | || || |||||||||||||||||||| ||||    
T  16995299 ccacttttggtcccacattccaccacgtcagcagaatctgcatcaatt 16995346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 221
Target Start/End: Complemental strand, 10409754 - 10409609
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||| |||||||| ||||         |||||||||||||||  |||||||| |||||    
T  10409754 aaagggtaaatacctcttttcatccatgtaatattagcgaattccgattttagtccctgt-aaaaaaaagatttagattttgtctctgtaattttagatt 10409656  T
Q  179 tttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
     ||||||||||    |||| || || ||||| |||||||||||||||    
T  10409655 cttccacttttgatccctcattccaccacgttagcagaatctgcata 10409609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 20458691 - 20458834
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||| | ||||||||||| |||||||| |||||||||||||||||| ||||          ||||||||||||||  |||||||||||||| |    
T  20458691 agggtaaatacattttttcgtccctgtaatattaacgaattccggttttagtccctgtaaataaaaa-atttagattttgtcgctgtaatttcagattct 20458789  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||||||||    |||| || || ||||| |||||||||||||||    
T  20458790 tccacttttggtccctcattccaccacgtaagcagaatctgcata 20458834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 38879723 - 38879867
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt-nnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    |||||||||||||||||||||||| |||||||||||||||||  |||||||  ||||          |||||||||||||||| |||||||||| ||| |    
T  38879723 gggtaaatacctcttttcgtccctgtaatattagcgaattccaattttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 38879822  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||||||||    |||| || || ||||| |||||||||||||||    
T  38879823 tccacttttggtccctcattccaccacgtaagcagaatctgcata 38879867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 44816832 - 44816978
Alignment:
Q  83 ggtaaatacctcttttc--gtccctataatattagcgaattccggttttagtctctgt--nnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    |||||||||||||||||  |||||| ||||||||||||||| ||||||||||||||||           ||||| |||||||||| ||||||||||||||    
T  44816832 ggtaaatacctcttttctcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaaaagattttgattttgtccctgtaatttcagatt 44816931  T
Q  179 tttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
     ||||||||||    |||| || || ||||| |||||||||||||||    
T  44816932 cttccacttttggtccctcattccaccacgtaagcagaatctgcata 44816978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 220
Target Start/End: Original strand, 7657967 - 7658113
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnn--gatttagattttgtccatgtaatttcagat 177  Q
    |||| ||||||||||||||||||| | ||||||||||||||| |||||||| || ||||           |||||||||| |||||||||||||||| ||    
T  7657967 aaggctaaatacctcttttcgtccatgtaatattagcgaatttcggttttaatccctgtaaaaaaaaaaagatttagattatgtccatgtaatttcaaat 7658066  T
Q  178 ttttccactttt----cctcctttcatcacgtcagcagaatctgcat 220  Q
    | || |||||||    | ||||||||||||||||||| |||||||||    
T  7658067 tcttacacttttggtccatcctttcatcacgtcagcaaaatctgcat 7658113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 41599958 - 41600101
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||||||||||  | |          ||||||||||||||| |||||||||||||| ||    
T  41599958 gggtaaatacctcttttcatccctgtaatattagcgaatttcggttttagtccatataaaaaaaaatatttagattttgtccctgtaatttcagattctt 41600057  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||| |||    |||| || || ||||| |||||||||||||||    
T  41600058 ccacatttgatccctcattccaccacgttagcagaatctgcata 41600101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 33162920 - 33162863
Alignment:
Q  76 attaaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    ||||||||||||||||||||||||||| || ||||||||||||||| | |||||||||    
T  33162920 attaaagggtaaatacctcttttcgtctctgtaatattagcgaatttctgttttagtc 33162863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 179
Target Start/End: Complemental strand, 6466188 - 6466086
Alignment:
Q  77 ttaaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcaga 176  Q
    |||||||||||||| ||||||| ||  || ||||||||||||||| ||||||||||||||||         ||||| |||| ||||| ||||||||||||    
T  6466188 ttaaagggtaaatatctctttttgtatctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttggattctgtccgtgtaatttcaga 6466089  T
Q  177 ttt 179  Q
    |||    
T  6466088 ttt 6466086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 24195250 - 24195199
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    |||||||||||||||||||||||| |||||||||||||||| | ||||||||    
T  24195250 gggtaaatacctcttttcgtccctgtaatattagcgaattctgattttagtc 24195199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 31852210 - 31852157
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    |||||| ||||||||||||||||||| |||||||| |||||| |||||||||||    
T  31852210 aagggttaatacctcttttcgtccctgtaatattaacgaatttcggttttagtc 31852157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 24195108 - 24195031
Alignment:
Q  148 gatttagattttgtccatgtaatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||||||||||||||| |||||||||| ||| ||||||||||    |||| || |||||||| |||||||||||||||    
T  24195108 gatttagattttgtccttgtaatttcatattcttccacttttggtccctcattccatcacgtaagcagaatctgcata 24195031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 23383499 - 23383550
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    |||||||||| |||||||||| || ||||||||| |||||||||||||||||    
T  23383499 gggtaaatacttcttttcgtctctgtaatattagtgaattccggttttagtc 23383550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 31851242 - 31851382
Alignment:
Q  83 ggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttc 182  Q
    ||||||||||||||||||||| | ||||||||| ||||| || |||||||  ||||          ||||||||| ||||  |||||||||| |||||||    
T  31851242 ggtaaatacctcttttcgtccttttaatattagtgaatttcgattttagttcctgtaaaaaaaa--atttagattctgtcattgtaatttcatatttttc 31851339  T
Q  183 cactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||||||     ||| ||||| |||||||||||||||||||||    
T  31851340 cacttttgatctctcttttcaccacgtcagcagaatctgcata 31851382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 181
Target Start/End: Original strand, 48648263 - 48648360
Alignment:
Q  83 ggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||| |||||||||||||| |||||| |||||||| || ||||||||  |||         |||||||||||||||| |||||||||||||||||    
T  48648263 ggtaaatatctcttttcgtccctgtaatatcagcgaatttcgattttagtccatgt-aagaaaaagatttagattttgtccctgtaatttcagattttt 48648360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 33162651 - 33162706
Alignment:
Q  194 ctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcct 249  Q
    ||||||||||||||| |||||||| ||||||| ||| | |||||||||| ||||||    
T  33162651 ctttcatcacgtcagtagaatctgtataaattacgttcttgtaatttcaaattcct 33162706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 14647029 - 14646972
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    ||||| ||||||  |||| |||||| |||||| |||||||||||||||||||| ||||    
T  14647029 agggttaataccctttttagtccctgtaatatgagcgaattccggttttagtccctgt 14646972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 20963494 - 20963602
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt-nnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||| || ||||||||||| ||||||||| ||||||  ||||||||| ||||          ||||||||||| |||| |||||||| ||||| |    
T  20963494 gggtaaatatctattttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaaaagatttagatttagtccctgtaattttagattct 20963593  T
Q  181 tccactttt 189  Q
    |||||||||    
T  20963594 tccactttt 20963602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 6e-49; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 85 - 251
Target Start/End: Original strand, 9396702 - 9396872
Alignment:
Q  85 taaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttcca 184  Q
    ||||||||||||||||||||| ||||||||||||||| || |||||||||||||         |||||||||||||||| | |||||||| |||||||||    
T  9396702 taaatacctcttttcgtccctgtaatattagcgaatttcgattttagtctctgttaaaaaaaagatttagattttgtccctataatttcaaatttttcca 9396801  T
Q  185 ctttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9396802 cttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcc 9396872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 74 - 251
Target Start/End: Complemental strand, 46046809 - 46046629
Alignment:
Q  74 atattaaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttc 173  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||         |||||||||||||||| |||||||||    
T  46046809 atatttaagggtaaatacct-ttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttc 46046711  T
Q  174 agatttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||| ||||||||||    ||||||||||||||||||||| ||||||||| |||| ||||| |||||||||||||||||||    
T  46046710 agattcttccacttttgatccctcctttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcagattcctcc 46046629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 85 - 251
Target Start/End: Complemental strand, 38574343 - 38574173
Alignment:
Q  85 taaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttcca 184  Q
    ||||||||| ||||||||||| |||||||||||||||| |||||||||| ||||         |||||||||||||||| |||||||||| ||| |||||    
T  38574343 taaataccttttttcgtccctgtaatattagcgaattctggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcatattcttcca 38574244  T
Q  185 ctttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||    |||||||||||||||||| || ||||||||| |||| |||||||||||||||||||||||||    
T  38574243 cttttggtccctcctttcatcacgtcaacaaaatctgcatcaattgcgtccctgtaatttcagattcctcc 38574173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 82 - 251
Target Start/End: Complemental strand, 9516988 - 9516815
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||         |||||||||||||||| |||||||||||||| ||    
T  9516988 gggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 9516889  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    | ||||||    ||||||||||||| |||| || ||||| |||||||| ||||| |||||||||||||||||||    
T  9516888 ctacttttggtccctcctttcatcaagtcaacaaaatctacataaattacgtccttgtaatttcagattcctcc 9516815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 251
Target Start/End: Original strand, 3018014 - 3018185
Alignment:
Q  85 taaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnn-gatttagattttgtccatgtaatttcagatttttcc 183  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| | ||          |||||||||||||||| |||||||||| ||| ||||    
T  3018014 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtcccggtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 3018113  T
Q  184 actttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||    |||||||||||||||||||||||||||||||||||| || || |||||||||| ||||||||    
T  3018114 acttttggtccctcctttcatcacgtcagcagaatctgcataaattacggccttgtaatttcacattcctcc 3018185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 9618982 - 9619152
Alignment:
Q  84 gtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttcc 183  Q
    |||||||||| ||||||||| | ||||||||||||||||||||||||||| ||||         |||||||||||||||| |||||||||||||| ||||    
T  9618982 gtaaatacctattttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaacaaagatttagattttgtccctgtaatttcagattcttcc 9619081  T
Q  184 actttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||    ||||||||||||| |||| ||||||||||||||| | |||||||||||||||| ||||||||    
T  9619082 acttttggtccctcctttcatcaagtcaacagaatctgcataaa-tacgtccctgtaatttcatattcctcc 9619152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 90 - 251
Target Start/End: Original strand, 15640724 - 15640888
Alignment:
Q  90 acctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttccactttt 189  Q
    |||||||||||||||| ||||||||||||||||||||||||||  ||||         |||||||||||||||| |||||||||| ||| || |||||||    
T  15640724 acctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaa-gatttagattttgtccctgtaatttcatattctttcactttt 15640822  T
Q  190 ----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
        |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||    
T  15640823 ggtccctcctttcatcacatcagcagaatatgcataaattacgtccctgtaatttcagattcctcc 15640888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 85 - 251
Target Start/End: Original strand, 7819018 - 7819187
Alignment:
Q  85 taaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttcca 184  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||  |||         |||||||||||||||| |||||||||||||| |||||    
T  7819018 taaatacctcttttcgaccatataatattagcgaattccggttttagtca-tgtaaataaaaagatttagattttgtccctgtaatttcagattcttcca 7819116  T
Q  185 ctttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||    |||||||||||||||| || | ||||||||| |||| ||||| |||||||||||||||||||    
T  7819117 cttttggttcctcctttcatcacgttagtaaaatctgcatcaattacgtccatgtaatttcagattcctcc 7819187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 80 - 247
Target Start/End: Complemental strand, 37013086 - 37012916
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    ||||||||||||||| |||||||||| |||||||||||||||| |||||||||| ||||          ||| ||||||||||| |||||||||| |||     
T  37013086 aagggtaaatacctcatttcgtccctgtaatattagcgaattctggttttagtccctgtataaaaaaaaatt-agattttgtccctgtaatttcatattc 37012988  T
Q  180 ttccacttttc----ctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattc 247  Q
    ||||||||||     |||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||    
T  37012987 ttccacttttggtcactcctttcatcacgtcagcaaaatctgcataaattacgtccctgtaatttcatattc 37012916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 26252337 - 26252441
Alignment:
Q  151 ttagattttgtccatgtaatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagatt 246  Q
    ||||||||||||| |||||||||||||| ||||||||||    ||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||    
T  26252337 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcaagtcaacagaatctgcataaattacgtccctgtaatttcagatt 26252436  T
Q  247 cctcc 251  Q
    |||||    
T  26252437 cctcc 26252441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 18713026 - 18713133
Alignment:
Q  148 gatttagattttgtccatgtaatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcag 243  Q
    |||||||||||||||| |||||||||| ||| ||||| ||||    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  18713026 gatttagattttgtccctgtaatttcatattgttccaattttggtccctcctttcatcacgtcagcaaaatctgcataaattacgtccctgtaatttcag 18713125  T
Q  244 attcctcc 251  Q
    ||||||||    
T  18713126 attcctcc 18713133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 34064294 - 34064187
Alignment:
Q  148 gatttagattttgtccatgtaatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcag 243  Q
    |||||||||||||||  |||||||||||||| ||||||||||    ||| |||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  34064294 gatttagattttgtctctgtaatttcagattcttccacttttggtcccttctttcatcacgtcagcagaatctgcataaattacgtccttgtaatttcag 34064195  T
Q  244 attcctcc 251  Q
    ||||||||    
T  34064194 attcctcc 34064187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 251
Target Start/End: Complemental strand, 48580239 - 48580071
Alignment:
Q  87 aatacctcttttcgtccctataatattagcgaattccggttttagtctctg-tnnnnnnnnngatttagattttgtccatgtaatttcagatttttccac 185  Q
    ||||||||||||||||||| |||||||||||||||||||||||| || ||| |         |||||||||||||||| |||||||||| ||| ||||||    
T  48580239 aatacctcttttcgtccctgtaatattagcgaattccggttttaatc-ctgataaaaaaaacgatttagattttgtccctgtaatttcatattgttccac 48580141  T
Q  186 tttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||    |||||||||||||| | |||||||| |||||||||| ||||| |||||||||| ||||||||    
T  48580140 ttttggtccctcctttcatcaccttagcagaatatgcataaattacgtccttgtaatttcaaattcctcc 48580071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 87 - 251
Target Start/End: Original strand, 4355887 - 4356054
Alignment:
Q  87 aatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttccact 186  Q
    |||||||||||| || | ||||||||||||||||||||||||||||  ||||         | ||||||||||||| ||||||||||| ||| || ||||    
T  4355887 aatacctctttttgttcatataatattagcgaattccggttttagttcctgtaaaaacaa-gctttagattttgtctatgtaatttcatattctttcact 4355985  T
Q  187 ttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||    |||| ||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||    
T  4355986 tttggtccctcatttcatcacgttagcagaatctgcataaattacgtccttgtaatttcagattcctcc 4356054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 80 - 251
Target Start/End: Complemental strand, 31090441 - 31090266
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    ||||||||||| |||||||||||||| ||||||||||||||| || |||||||| ||||          | ||||||||||||| ||||||||||||||     
T  31090441 aagggtaaatatctcttttcgtccctgtaatattagcgaatttcgattttagtccctgtaaaaaaaaaaaattagattttgtccctgtaatttcagattc 31090342  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||| ||||||    ||||||||||||| ||||  ||||||| |||||||| ||||| |||||||||||||| ||||    
T  31090341 ttctacttttggtccctcctttcatcaagtcaatagaatctacataaattacgtccttgtaatttcagatttctcc 31090266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 82 - 246
Target Start/End: Complemental strand, 41947232 - 41947066
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||||||||||  | |          | ||||||||||||| |||||||||| ||||||    
T  41947232 gggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtccttttaaaaaaaa--aattagattttgtccttgtaatttcatattttt 41947135  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagatt 246  Q
    ||||||||    ||| ||||||| | |||| ||||||||||||||||| ||||||||||||||||||||    
T  41947134 ccacttttggtccctgctttcataaagtcaacagaatctgcataaattacgtccctgtaatttcagatt 41947066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 3273620 - 3273795
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatt-tagattttgtccatgtaatttcagattt 179  Q
    |||||||||| |||||||||||||| |||||||||||||||||| |||||||| | ||           || |||||||||||| |||||||||| |||     
T  3273620 agggtaaatatctcttttcgtccctgtaatattagcgaattccgattttagtccccgtaatttttttttttatagattttgtccctgtaatttcatattc 3273719  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||||    ||||||||||||| ||||  |||||||||||||||| ||||| |||||||||| ||||||||    
T  3273720 ttccacttttggtccctcctttcatcaagtcattagaatctgcataaattacgtccttgtaatttcatattcctcc 3273795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 31943949 - 31944123
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt-nnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||          |||||||||||||||| |||||||||| |||     
T  31943949 agggtaaatac-tcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaataaaaaagatttagattttgtccctgtaatttcatattc 31944047  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||||     ||||||||||||||||| || || |||||| ||||  |||| |||||||||||||||||||    
T  31944048 ttccacttttggtctctcctttcatcacgtcaacaaaacctgcatcaattatgtccatgtaatttcagattcctcc 31944123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 72 - 251
Target Start/End: Complemental strand, 13132327 - 13132146
Alignment:
Q  72 aaatattaaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatt 171  Q
    ||||| || ||||||||||||| ||||||||||| ||||||||||||||| || |||||||| ||||         |||||||||| ||||| |||||||    
T  13132327 aaatagtatagggtaaatacctattttcgtccctgtaatattagcgaatttcgattttagtc-ctgtaaaaaaaa-gatttagattctgtccctgtaatt 13132230  T
Q  172 tcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||| ||| ||||||||||    ||| |||||||||  ||||||||||||||||||||| ||||| |||||||||| ||| ||||    
T  13132229 tcatattcttccacttttggtcccttctttcatcaaatcagcagaatctgcataaattacgtccttgtaatttcatatttctcc 13132146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 221
Target Start/End: Complemental strand, 31944334 - 31944185
Alignment:
Q  76 attaaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcag 175  Q
    |||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||||||||||          | ||||||||||||||||||||||||     
T  31944334 attaaagggtaaatacttcttttcgtccttgtaatattagcgaatttcggttttagtctctgtaaaaaaaaataattagattttgtccatgtaatttcat 31944235  T
Q  176 atttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||| ||||||||||    |||| || || ||||||| |||||||||||||    
T  31944234 attcttccactttttgtccctcattccaccacgtcaacagaatctgcata 31944185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 225
Target Start/End: Original strand, 35376164 - 35376309
Alignment:
Q  83 ggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttc 182  Q
    ||||||||||| ||||||||||| |||||||||||||||| |||||||||| ||||         |||||||||||||||  |||||||| ||||| |||    
T  35376164 ggtaaatacctattttcgtccctgtaatattagcgaattctggttttagtccctgt-aaaaaaaagatttagattttgtctctgtaattttagattcttc 35376262  T
Q  183 cactttt----cctcctttcatcacgtcagcagaatctgcataaatt 225  Q
    |||||||     ||||||||||||||||||||||||| |||||||||    
T  35376263 cacttttggtctctcctttcatcacgtcagcagaatccgcataaatt 35376309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 79 - 178
Target Start/End: Original strand, 48259820 - 48259919
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||| || ||||         |||||||||||||||||||||||||||||||    
T  48259820 aaagggtaaatatctcttttcgtccctgtaatattagcgaattccggttttaatccctgtaaataaaaagatttagattttgtccatgtaatttcagatt 48259919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 9397077 - 9396934
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||| ||||||||||||| |||||||||| |||||||||||||||| ||||         |||||||||||||||| |||||||||||||| |    
T  9397077 agggtaaatacttcttttcgtccctgtaatattagcaaattccggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcagattct 9396979  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||||||||    | || || || |||||||||||||||||||||    
T  9396978 tccacttttggaccatcattccaacacgtcagcagaatctgcata 9396934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 9516611 - 9516753
Alignment:
Q  83 ggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttc 182  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||  |||         |||||||||||||||| |||||||||| ||| |||    
T  9516611 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttc 9516710  T
Q  183 cactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||||||    |||| || || ||||| |||||||||||||||    
T  9516711 cacttttggtccctcattccaccacgtaagcagaatctgcata 9516753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 9619359 - 9619250
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    ||||||||||||||||||| |||||| |||||||||||||||| |||||||||| ||||         |||||||||||||||| |||||||||| |||     
T  9619359 aagggtaaatacctctttttgtccctgtaatattagcgaattctggttttagtccctgtagaaaaaaagatttagattttgtccttgtaatttcatattc 9619260  T
Q  180 ttccactttt 189  Q
    ||||||||||    
T  9619259 ttccactttt 9619250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 18667375 - 18667463
Alignment:
Q  168 aatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcca 252  Q
    ||||||| ||| ||||||||||    |||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||    
T  18667375 aatttcatattgttccacttttggtccctcctttcatcacgtcaacaaaatctgcataaattacgtccctgtaatttcagattcctcca 18667463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 31218360 - 31218303
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  31218360 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 31218303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 26252615 - 26252508
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||| |||||||||||||| ||||||||||||||||| ||||||||  ||||         |||||||||||||||| |||||||||| ||| ||    
T  26252615 gggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 26252516  T
Q  182 ccactttt 189  Q
    ||||||||    
T  26252515 ccactttt 26252508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 34063983 - 34064089
Alignment:
Q  83 ggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttc 182  Q
    ||||||||||||||||||||||| |||||||| |||||||  ||||||||| ||||         |||||||||||||||  |||||||||||||| |||    
T  34063983 ggtaaatacctcttttcgtccctgtaatattaacgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcagattcttc 34064082  T
Q  183 cactttt 189  Q
    |||||||    
T  34064083 cactttt 34064089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 38573968 - 38574111
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||| | ||||||||| |||||||| ||||| || ||||         |||||||||||||||| |||||||||| ||| |    
T  38573968 agggtaaatacctcttttcgtccatgtaatattagtgaattccgattttaatccctgtaaaaaaaa-gatttagattttgtccctgtaatttcatattct 38574066  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||||||||    |||| || || |||||||||||||||||||||    
T  38574067 tccacttttggtccctcattccaccacgtcagcagaatctgcata 38574111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 82 - 221
Target Start/End: Complemental strand, 3273996 - 3273855
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||||||| || |         |||||||||||| ||| |||||||||||||| ||    
T  3273996 gggtaaatacctcttttcgtcccg-taatattagcgaatttcggttttagtccctataaaaaaaa-gatttagattttatccctgtaatttcagattctt 3273899  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||    |||| ||||| |||||||| ||||||||||||    
T  3273898 ccacttttgatccctcatttcaccacgtcagtagaatctgcata 3273855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 80 - 189
Target Start/End: Original strand, 12904745 - 12904853
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    ||||||||||| ||||||||||||||||||||||||||||||  |||||||||| ||||          ||||||||||||||| | ||||||||||||     
T  12904745 aagggtaaatatctcttttcgtccctataatattagcgaattttggttttagtccctgtaaaaaaaaa-atttagattttgtccttataatttcagattc 12904843  T
Q  180 ttccactttt 189  Q
    ||||||||||    
T  12904844 ttccactttt 12904853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 41946962 - 41947016
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  41946962 aaagggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtc 41947016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 85 - 221
Target Start/End: Original strand, 13131943 - 13132084
Alignment:
Q  85 taaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnn-gatttagattttgtccatgtaatttcagatttttcc 183  Q
    ||||||||||||||||||| | |||||||| |||||| | ||||||||| ||||          |||||||||| ||| |||||||||||||||| ||||    
T  13131943 taaatacctcttttcgtccttgtaatattaacgaatttctgttttagtccctgtaaaaaaaaaagatttagattatgttcatgtaatttcagattcttcc 13132042  T
Q  184 actttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||    |||| ||||| |||||||||||||||||||||    
T  13132043 acttttgatccctcatttcaccacgtcagcagaatctgcata 13132084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 15641093 - 15640950
Alignment:
Q  83 ggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnn-gatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||||||||||||||| | ||||||||| |||||||||||||| |  ||||          |||||||||| ||||| |||||||||||||| ||    
T  15641093 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttaattcctgtaaaaaaaaaagatttagattatgtccctgtaatttcagattctt 15640994  T
Q  182 ccactt----ttcctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||    |||||| ||||| |||||||||||||| ||||||    
T  15640993 ccacttttggttcctcatttcaccacgtcagcagaatatgcata 15640950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 46046429 - 46046486
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| |||||||| ||||    
T  46046429 agggtaaataccttttttcgtccctgtaatattagcgaattccgattttagtccctgt 46046486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 221
Target Start/End: Complemental strand, 48260126 - 48259986
Alignment:
Q  84 gtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttcc 183  Q
    ||||||| |||||||||||||| |||||||||||||||  | ||||| |||||||         |||||||||||||||| |||||||||| ||| ||||    
T  48260126 gtaaatatctcttttcgtccctgtaatattagcgaattttgattttaatctctgt-aaaaaaaagatttagattttgtccctgtaatttcaaattcttcc 48260028  T
Q  184 actttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||     ||| || ||||||||||||| ||||||||||    
T  48260027 acttttgatcgctcattccatcacgtcagcataatctgcata 48259986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 18667671 - 18667620
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggtttta 130  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| ||||||    
T  18667671 aaagggttaatacctcttttcgtccctgtaatattagcgaattccagtttta 18667620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 189
Target Start/End: Complemental strand, 35376508 - 35376399
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||| |||||| |||||||||||||| |||||||||| |||||| ||||||||| ||||         |||||| ||||||||| |||||||||||| |    
T  35376508 aaaggataaatatctcttttcgtccctgtaatattagcaaattccagttttagtccctgt-aaaaaaaagatttaaattttgtccctgtaatttcagaat 35376410  T
Q  179 tttccactttt 189  Q
     ||||||||||    
T  35376409 cttccactttt 35376399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 221
Target Start/End: Original strand, 37012712 - 37012850
Alignment:
Q  87 aatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttccact 186  Q
    ||||||||||||||||| | ||||||||||||||||   ||| ||||  |||         |||||||||||||||| |||||||||||||| |||||||    
T  37012712 aatacctcttttcgtccttgtaatattagcgaattctaatttcagtccttgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 37012811  T
Q  187 ttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||    |||  || || |||||||||||||||||||||    
T  37012812 tttggtcccttattccaccacgtcagcagaatctgcata 37012850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 31082182 - 31082226
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattcc 123  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||    
T  31082182 aaagggtaaataccccttttcgtccctataatatgagcgaattcc 31082226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 48579871 - 48579962
Alignment:
Q  87 aatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||||||||||||||| |||||||| |||| | |||||||||||| |||         |||||||||||||||  ||||||||||||||    
T  48579871 aatacctcttttcgtccctgtaatattaacgaagttcggttttagtctatgtaaaaaaaaagatttagattttgtctctgtaatttcagatt 48579962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 4356253 - 4356202
Alignment:
Q  87 aatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    ||||||||||||| ||||| ||||||||||||||| |||||||| |||||||    
T  4356253 aatacctcttttcatccctgtaatattagcgaatttcggttttaatctctgt 4356202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 3018398 - 3018332
Alignment:
Q  73 aatattaa-agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    |||||||| ||||| |||| |||||||||||||| |||||||| |||||| ||||||||||| ||||    
T  3018398 aatattaatagggttaatatctcttttcgtccctgtaatattaacgaatttcggttttagtccctgt 3018332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 36887678 - 36887736
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    |||||| |||||||||||| |||||| |||||||||||||||  |||||||||| ||||    
T  36887678 aagggttaatacctcttttggtccctgtaatattagcgaattttggttttagtccctgt 36887736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 12520643 - 12520688
Alignment:
Q  88 atacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||||    
T  12520643 ataccacttttagtccctataatattagcgaattccagttttagtc 12520688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 31090060 - 31090168
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnn-gatttagattttgtccatgtaatttcagatttt 180  Q
    |||||||||| |||||| |||||| ||||||||| ||||| || |||||||| ||||          |||||||||||||||| |||||||||| ||| |    
T  31090060 gggtaaatacttctttttgtccctgtaatattagtgaatttcgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 31090159  T
Q  181 tccactttt 189  Q
    |||||||||    
T  31090160 tccactttt 31090168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 36889058 - 36889005
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    |||||| |||||| ||||| ||||||||||||||||||||||  ||||||||||    
T  36889058 aagggttaataccacttttggtccctataatattagcgaattttggttttagtc 36889005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 121
Target Start/End: Complemental strand, 46935219 - 46935178
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaatt 121  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  46935219 aagggttaatacctcttttggtccctataatattagcgaatt 46935178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 221
Target Start/End: Complemental strand, 7819322 - 7819249
Alignment:
Q  152 tagattttgtccatgtaatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||||||||||| |||||| ||||||| ||||||||||    |||| || || |||||||||||||||||||||    
T  7819322 tagattttgtccctgtaatgtcagattcttccacttttggtccctcattccaccacgtcagcagaatctgcata 7819249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 7819399 - 7819347
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    |||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  7819399 agggtaaatatcttttttcgtcccggtaatattagcgaatttcggttttagtc 7819347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 31218256 - 31218292
Alignment:
Q  74 atattaaagggtaaatacctcttttcgtccctataat 110  Q
    |||||| ||||||||||||||||||||||||||||||    
T  31218256 atattatagggtaaatacctcttttcgtccctataat 31218292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 50462775 - 50462733
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattcc 123  Q
    ||||| |||||||||||| |||||| |||||||||||||||||    
T  50462775 agggttaatacctcttttggtccctgtaatattagcgaattcc 50462733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 53896444 - 53896502
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    |||||| ||||||||||||  || || |||||| |||||||||||||||||||| ||||    
T  53896444 aagggttaatacctcttttgatcgctgtaatatgagcgaattccggttttagtccctgt 53896502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 20069677 - 20069620
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    |||||||||| | |||||||||||| |||||| |||||||||| ||||| ||| ||||    
T  20069677 agggtaaatatcccttttcgtccctgtaatatgagcgaattccagttttggtccctgt 20069620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 18713341 - 18713289
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    ||||| ||||||||||||||| ||| || ||||||||| || |||||||||||    
T  18713341 agggttaatacctcttttcgtacctgtattattagcgagtttcggttttagtc 18713289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 43313589 - 43313533
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    |||| |||||| ||||| ||| || |||||||||||||||| |||||||||| ||||    
T  43313589 gggttaataccacttttggtctctgtaatattagcgaattctggttttagtccctgt 43313533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 6e-46; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 82 - 251
Target Start/End: Original strand, 9481182 - 9481355
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||         |||||||||| ||||| |||||||||| ||| ||    
T  9481182 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattctt 9481281  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||| ||||    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  9481282 ccaattttggtccctcctttcatcacgtcagcagaatctgcataaattacgttcctgtaatttcagattcctcc 9481355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 78 - 255
Target Start/End: Complemental strand, 32017885 - 32017705
Alignment:
Q  78 taaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagat 177  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||         |||||||||||||||| |||||||||| ||    
T  32017885 taaagggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcatat 32017787  T
Q  178 ttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctccactt 255  Q
    | ||||||||||    |||||||||||||||||||| |||| |||||||||| | |||||||||||||| ||||||||||||    
T  32017786 tcttccacttttggtccctcctttcatcacgtcagcggaatatgcataaattacatccctgtaatttcaaattcctccactt 32017705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 79 - 247
Target Start/End: Original strand, 30617964 - 30618131
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| | |||||||| || |          ||||||||||||||| |||||||||| |||    
T  30617964 aaagggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtc-ctttaaaaaa----atttagattttgtccctgtaatttcatatt 30618058  T
Q  179 tttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattc 247  Q
     ||||||||||    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30618059 gttccacttttggtccctccttttatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattc 30618131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 24731934 - 24732111
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngat---ttagattttgtccatgtaatttcagat 177  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||          |    ||||||||||||| |||||||||||||    
T  24731934 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaaaaattagattttgtccctgtaatttcagat 24732033  T
Q  178 ttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    | ||| ||||||    ||||||||||||| |||| || ||||| |||||||| ||||| |||||||||||||||||||    
T  24732034 tcttctacttttggtccctcctttcatcaagtcaacataatctacataaattacgtccttgtaatttcagattcctcc 24732111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 33637625 - 33637732
Alignment:
Q  148 gatttagattttgtccatgtaatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcag 243  Q
    |||||||||||||| | |||||||| ||||| ||||||||||    ||||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  33637625 gatttagattttgttcttgtaattttagattcttccacttttggtccctcctttcattacgtcagcagaatctgcatagattacgtccctgtaatttcag 33637724  T
Q  244 attcctcc 251  Q
    ||||||||    
T  33637725 attcctcc 33637732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 80 - 221
Target Start/End: Original strand, 18500313 - 18500457
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||         |||||||||||||||| |||||||||| |||     
T  18500313 aagggtaaatacctcttttcgtccctataatattagcgaatttcggttttagtccctgt-aagaaaaagatttagattttgtccctgtaatttcatattc 18500411  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||||    |||| || || ||||| |||||||||||||||    
T  18500412 ttccacttttggtccctcattccaccacgtaagcagaatctgcata 18500457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 2299617 - 2299515
Alignment:
Q  152 tagattttgtccatgtaatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattc 247  Q
    |||||||||||| |||||||||||||| ||||||||||    ||||||||||||| |||| ||||||||||||||||| ||||||||| |||||||||||    
T  2299617 tagattttgtccctgtaatttcagattcttccactttttatccctcctttcatcaagtcaacagaatctgcataaattacgtccctgt-atttcagattc 2299519  T
Q  248 ctcc 251  Q
    ||||    
T  2299518 ctcc 2299515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 107 - 251
Target Start/End: Complemental strand, 3230215 - 3230068
Alignment:
Q  107 taatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttccactttt---cctcctttcatcac 203  Q
    |||||||||||||||||| |||||||| ||||         |||||||||||||||||| |||||||| ||| || |||||||   | || |||||||||    
T  3230215 taatattagcgaattccgattttagtccctgtaaaataaaagatttagattttgtccatataatttcatattctttcacttttggtcatcttttcatcac 3230116  T
Q  204 gtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||| ||||||||||||||||  |||||||||||||||| ||||||||    
T  3230115 gtcaacagaatctgcataaatcacgtccctgtaatttcatattcctcc 3230068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 10322032 - 10321936
Alignment:
Q  159 tgtccatgtaatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||| |||||||||||||| || |||||||    | |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  10322032 tgtccctgtaatttcagattctttcacttttggtccttcctttcatcacgtcagcagaatctgcataaattacgtccttgtaatttcagattcctcc 10321936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 24732319 - 24732173
Alignment:
Q  78 taaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagat 177  Q
    |||||||||||||||||||||||||||| |||||||||||||||||   ||||||| ||||         ||||||||||||||||||||||||||| ||    
T  24732319 taaagggtaaatacctcttttcgtccctgtaatattagcgaattcc-aatttagtccctgtaaaaaaaaagatttagattttgtccatgtaatttcatat 24732221  T
Q  178 ttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    | ||||||||||    |||| || || ||||| |||||||||||||||    
T  24732220 tcttccacttttggtccctcattccaccacgtaagcagaatctgcata 24732173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 18500708 - 18500656
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  18500708 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtc 18500656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 19284130 - 19284258
Alignment:
Q  83 ggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttc 182  Q
    ||||||||||||||||||| | | ||||||||||||||||| |||||||||   ||         |||||||||||||||| |||||||||||||| |||    
T  19284130 ggtaaatacctcttttcgttcatgtaatattagcgaattccagttttagtccacgtaaaataaaagatttagattttgtccctgtaatttcagattcttc 19284229  T
Q  183 cactttt----cctcctttcatcacgtca 207  Q
    |||||||    ||||||||||||| ||||    
T  19284230 cacttttggtccctcctttcatcatgtca 19284258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 26385278 - 26385385
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||||||||  |||         |||||||||||||||| |||||||| | ||| ||    
T  26385278 gggtaaatacctcttttcgtctctgtaatattagcgaattctggttttagtccatgtagaaaaaaagatttagattttgtccctgtaattttatattctt 26385377  T
Q  182 ccactttt 189  Q
    ||||||||    
T  26385378 ccactttt 26385385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 251
Target Start/End: Complemental strand, 26385649 - 26385483
Alignment:
Q  85 taaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttcca 184  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||| ||||         ||||||||| |||| | || ||||||| ||| |||||    
T  26385649 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaacaaagatttagatgttgttcctgcaatttcatattcttcca 26385550  T
Q  185 ctttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||     |||||||||||| ||   || ||| |||||||| | |||||||||||||||| ||||||||    
T  26385549 cttttggtctctcctttcatcaagt---cataatatgcataaa-tacgtccctgtaatttcatattcctcc 26385483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 189
Target Start/End: Original strand, 9154884 - 9154987
Alignment:
Q  87 aatacctcttttcgtccctataatatt-agcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttccac 185  Q
    ||||||||||||| ||||| ||||||| ||||||||||| |||||||| ||||         |||||||||||||||| |||||||||||||| |||||     
T  9154884 aatacctcttttcctccctgtaatatttagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccag 9154983  T
Q  186 tttt 189  Q
    ||||    
T  9154984 tttt 9154987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 251
Target Start/End: Complemental strand, 30459267 - 30459106
Alignment:
Q  92 ctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttccacttttc- 190  Q
    |||||||||| ||| ||||||||||||||| |||||||| |||| ||         ||||  |||| ||||  |||||||||||||| || |||||||      
T  30459267 ctcttttcgttcctgtaatattagcgaatttcggttttaatctccgtaaaaaaaaagatt--gattatgtcattgtaatttcagattctttcacttttgg 30459170  T
Q  191 ---ctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
       ||||||||||||||| |||| ||||| |||||||| ||||||| |||||||| ||||||||    
T  30459169 tctctcctttcatcacgttagcataatctccataaattacgtccctataatttcaaattcctcc 30459106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 2299692 - 2299641
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagt 132  Q
    |||||||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  2299692 agggtaaatatctcttttcgttcctgtaatattagcgaattccggttttagt 2299641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 10321737 - 10321784
Alignment:
Q  86 aaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||    
T  10321737 aaatacttcttttcgtccctgtaatattagcgaattccggttttagtc 10321784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 221
Target Start/End: Complemental strand, 9854265 - 9854122
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    |||||| |||||  ||||| |||||| |||||||||||||||| |||||||||||  ||          ||||||||||||||| |||||||||| |||     
T  9854265 aagggttaatactgctttttgtccctgtaatattagcgaattctggttttagtct--gtaaaaataataatttagattttgtccttgtaatttcatattc 9854168  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||||    |||| ||||| |||||||||| ||||||||||    
T  9854167 ttccacttttggtccctcatttcaccacgtcagcaaaatctgcata 9854122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 245
Target Start/End: Complemental strand, 18500641 - 18500558
Alignment:
Q  166 gtaatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagat 245  Q
    ||||||| ||||| ||||||||||    ||||||||||||| | || |||||||||||||||||  ||||||||||||||||||    
T  18500641 gtaattttagattcttccacttttggtccctcctttcatcaaggcaacagaatctgcataaattatgtccctgtaatttcagat 18500558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 221
Target Start/End: Original strand, 33714494 - 33714630
Alignment:
Q  93 tcttttcgtccctataatattagcgaattccggttt--tagtctctgt--nnnnnnnnngatttagattttgtccatgtaatttcagatttttccacttt 188  Q
    ||||||||||||| ||||||||||||||||||||||  ||||| ||||           |||||||||||||||| |||||||||| ||| |||||||||    
T  33714494 tcttttcgtccctgtaatattagcgaattccggttttatagtccctgtaaaaaaaaaaagatttagattttgtccttgtaatttcatattcttccacttt 33714593  T
Q  189 t----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |    |||| || || ||||| |||||||||||||||    
T  33714594 tggtccctcattccaccacgtaagcagaatctgcata 33714630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 9481494 - 9481453
Alignment:
Q  148 gatttagattttgtccatgtaatttcagatttttccactttt 189  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  9481494 gatttagattttgtccttgtaatttcagattcttccactttt 9481453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 21070916 - 21070859
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    ||||| |||||| ||||| |||||| |||||| ||||||||||||| |||||||||||    
T  21070916 agggttaataccccttttagtccctgtaatatgagcgaattccggtattagtctctgt 21070859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 33714734 - 33714693
Alignment:
Q  209 cagaatctgcataaatttcgtccctgtaatttcagattcctc 250  Q
    ||||||||||||||||| ||||| ||||||||||||||||||    
T  33714734 cagaatctgcataaattacgtccttgtaatttcagattcctc 33714693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 30458898 - 30458950
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagt 132  Q
    |||| ||||||| ||||||||||||| ||||||||| ||||| ||||||||||    
T  30458898 aaggataaatacatcttttcgtccctgtaatattagtgaatttcggttttagt 30458950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 2299337 - 2299396
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    ||||||||||||  | ||||||||  | ||||||||||||||||||||||||||| ||||    
T  2299337 aaagggtaaatattttttttcgtctatgtaatattagcgaattccggttttagtccctgt 2299396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 14680949 - 14681025
Alignment:
Q  149 atttagattttgtccatgtaatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||||||||  |||||||||| ||| ||||||||||    | || ||||| |||||||||||||||||||||    
T  14680949 atttagattttgtctttgtaatttcatattcttccacttttggtccttcatttcaccacgtcagcagaatctgcata 14681025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 33637896 - 33637843
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtct 134  Q
    ||||||||||||||||||| ||  | |||||||| |||||| ||||||||||||    
T  33637896 agggtaaatacctcttttcatctttgtaatattaccgaatttcggttttagtct 33637843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 14681136 - 14681092
Alignment:
Q  202 acgtcagcagaatctgcataaatttcgtccctgtaatttcagatt 246  Q
    ||||||| |||||||||| | ||| ||||||||||||||||||||    
T  14681136 acgtcagtagaatctgcacatattacgtccctgtaatttcagatt 14681092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 21069514 - 21069570
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    |||| ||||||  |||| |||||| |||||| |||||||||||||||||||| ||||    
T  21069514 gggttaatacccattttagtccctgtaatatgagcgaattccggttttagtccctgt 21069570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 30618272 - 30618232
Alignment:
Q  149 atttagattttgtccatgtaatttcagatttttccactttt 189  Q
    ||||||||||||||| |||||||| ||||| ||||||||||    
T  30618272 atttagattttgtccctgtaattttagattcttccactttt 30618232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 32017605 - 32017679
Alignment:
Q  149 atttagattttgtccatgtaatttcagatttttccacttttcctccttt----catcacgtcagcagaatctgcata 221  Q
    |||||||||||||   |||||||||||||| ||||||||||  ||||||    || |||||||||||||||||||||    
T  32017605 atttagattttgtt--tgtaatttcagattcttccacttttggtcctttattccaccacgtcagcagaatctgcata 32017679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 4e-44; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 80 - 251
Target Start/End: Complemental strand, 22263573 - 22263396
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnn--gatttagattttgtccatgtaatttcagat 177  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||           |||| ||||||||||| |||||||||| ||    
T  22263573 aagggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaaagattcagattttgtccctgtaatttcatat 22263474  T
Q  178 ttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    | ||||||||||    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  22263473 tcttccacttttggtccctcctttcatcacgtcagcataatctgcataaattacgtccctgtaatttcagattcctcc 22263396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 79 - 251
Target Start/End: Complemental strand, 17850967 - 17850791
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||         | |||||||||||||| ||||||||||||||    
T  17850967 aaagggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcactgtaaataaaatgctttagattttgtccctgtaatttcagatt 17850868  T
Q  179 tttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
     ||||||||||    |||| |||||||||||||||| ||||||||| |||| ||||| |||||||||||||||||||    
T  17850867 cttccacttttggtccctcttttcatcacgtcagcaaaatctgcatcaattacgtccttgtaatttcagattcctcc 17850791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 81 - 255
Target Start/End: Original strand, 26236126 - 26236304
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    |||||||||| |||||||||||| | |||||||||||||||| |||||||||| ||||         |||||| ||||||||| |||||||||||||| |    
T  26236126 agggtaaatatctcttttcgtccttgtaatattagcgaattctggttttagtccctgtataaaaaaagatttatattttgtccctgtaatttcagattct 26236225  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctccactt 255  Q
    | |||||||    ||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  26236226 ttcacttttggtccctcctttcatcacgtcagcagaatttgcataaattacgtccctgtaatttcatattcctccactt 26236304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 82 - 251
Target Start/End: Complemental strand, 42671097 - 42670924
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||||||||||| |||||| || |||||||||||| | ||||||||| ||||         |||||||||| ||||| |||||||||| ||||||    
T  42671097 gggtaaatacctctttttgtccctgtagtattagcgaatttcagttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattttt 42670998  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  42670997 ccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgttcctgtaatttcagattcctcc 42670924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 93 - 250
Target Start/End: Original strand, 26135828 - 26135989
Alignment:
Q  93 tcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttccactttt--- 189  Q
    ||||||||||||| |||||||||||||||||| |||||||| ||||         |||||||||||||||| |||||||||||||| ||| ||||||       
T  26135828 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttctacttttggt 26135927  T
Q  190 -cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctc 250  Q
     ||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  26135928 ccctcctttcatcaagtcaacagaatctgcataaattacgtccttgtaatttcagattcctc 26135989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 82 - 251
Target Start/End: Original strand, 17463092 - 17463264
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||          ||| ||||||||||| ||||||||||| || |     
T  17463092 gggtaaatagttcttttcgtccctataatattagcgaattccggttttagtcgctgtaaaaaaaaaaatt-agattttgtccctgtaatttcaggttctc 17463190  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||    |||| |||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||    
T  17463191 ccacttttggtccctcatttcatcaagtcaacagaatctgcataaattacgtccctgtaatttcagattcctcc 17463264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 83 - 251
Target Start/End: Complemental strand, 26560932 - 26560759
Alignment:
Q  83 ggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngat-ttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||||||||||||||| | |||||||||||||||||| |||||||| | ||          |  ||||||||||||||| |||||||| ||| ||    
T  26560932 ggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtcccggtaaaaaaaaaaaaattagattttgtccatataatttcatattctt 26560833  T
Q  182 ccacttttc----ctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||     ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  26560832 ccacttttggtctctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcc 26560759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 82 - 251
Target Start/End: Original strand, 15106067 - 15106240
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||| |||||||||||||  ||||||||||||||| |||||||| || ||||         |||||||||||||||| |||||||| ||||| ||    
T  15106067 gggtaaatatctcttttcgtccccgtaatattagcgaatttcggttttaatccctgtaaataaaaagatttagattttgtccctgtaattttagattatt 15106166  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||    ||||||||||||||||||||  ||||||||| ||||  |||| |||||||||||||||||||    
T  15106167 ccacttttggtccctcctttcatcacgtcagctaaatctgcatcaattaagtccttgtaatttcagattcctcc 15106240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 79 - 252
Target Start/End: Original strand, 19251468 - 19251644
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||         |||||||||||||||| |||||||||| |||    
T  19251468 aaagggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcatatt 19251566  T
Q  179 tttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcca 252  Q
     ||||||||||    |||||||||||||| |||||||||| | ||||||||  || | |||||||||| |||||||||    
T  19251567 cttccacttttggtccctcctttcatcacatcagcagaatatacataaattatgttcttgtaatttcaaattcctcca 19251644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 149 - 251
Target Start/End: Complemental strand, 23854977 - 23854871
Alignment:
Q  149 atttagattttgtccatgtaatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcaga 244  Q
    ||||||||||||||  |||||||| | ||| ||||||||||    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23854977 atttagattttgtctctgtaattttatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcaga 23854878  T
Q  245 ttcctcc 251  Q
    |||||||    
T  23854877 ttcctcc 23854871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 23806022 - 23806125
Alignment:
Q  152 tagattttgtccatgtaatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattc 247  Q
    ||||||||| || |||||||| ||||| ||||||||||    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  23806022 tagattttgcccctgtaattttagattcttccacttttggtccctcctttcatcacgtcagcagaatccgcataaattacgtccctgtaatttcagattc 23806121  T
Q  248 ctcc 251  Q
    ||||    
T  23806122 ctcc 23806125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 39878102 - 39878275
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||| |||| |||| | ||||||||||||||||||||||||||| ||||          ||||||||| |||   |||||||||||||| |    
T  39878102 agggtaaatacctttttt-gtccttgtaatattagcgaattccggttttagtccctgtaaaaaaagatatttagattatgtatctgtaatttcagattct 39878200  T
Q  181 tccacttttc----ctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||||     |||||||||||| ||||||| |||||||||||||| |||||||||||||||| ||||||||    
T  39878201 tccacttttggtcactcctttcatcaagtcagcaaaatctgcataaattacgtccctgtaatttcatattcctcc 39878275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 17463473 - 17463362
Alignment:
Q  78 taaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagat 177  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||         |||||||||||||||| ||||||| || ||    
T  17463473 taaagggtaaatacctcttttcgcccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaattgcatat 17463374  T
Q  178 ttttccactttt 189  Q
    | ||||||||||    
T  17463373 tcttccactttt 17463362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 251
Target Start/End: Original strand, 33290062 - 33290222
Alignment:
Q  95 ttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttccacttttcctcc 194  Q
    |||| |||||| ||||||||||||||||| ||||||||| ||||          ||||||||| ||||| |||||||||| | |  |||||||||  |||    
T  33290062 ttttggtccctgtaatattagcgaattccagttttagtccctgtaaaataaaaaatttagattctgtccttgtaatttcatactcctccacttttggtcc 33290161  T
Q  195 ----tttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
        ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33290162 cttatttaaccacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 33290222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 20498746 - 20498918
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||  | ||||||||||||||| ||||||||||| ||||          ||||||||| ||||| |||| ||||||||| |    
T  20498746 agggtaaatacctcttttcgtctatgtaatattagcgaattacggttttagtccctgtaaaaaaaat-atttagattatgtccctgta-tttcagattct 20498843  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||||    |||||||| |||||||||| |||||||||||||||| ||||  | |||||||| ||||||||    
T  20498844 tccacttttggtccctccttttatcacgtcagtagaatctgcataaattacgtcaatataatttcatattcctcc 20498918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 23806330 - 23806223
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||||||| ||||         |||||||||||||||| |||||||||| ||| ||    
T  23806330 gggtaaatacctctttttgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 23806231  T
Q  182 ccactttt 189  Q
    ||||||||    
T  23806230 ccactttt 23806223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 23854688 - 23854795
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||         |||||||||||||||| |||||||||| ||| ||    
T  23854688 gggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 23854787  T
Q  182 ccactttt 189  Q
    ||||||||    
T  23854788 ccactttt 23854795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 19251848 - 19251705
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||         |||||||||| ||||| |||||||||| ||| |    
T  19251848 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgt-aaaaaaaagatttagattctgtccttgtaatttcatattct 19251750  T
Q  181 tccactt----ttcctcctttcatcacgtcagcagaatctgcata 221  Q
    |||||||    | |||| ||||| |||||||||||||||||||||    
T  19251749 tccactttcggtccctcatttcaccacgtcagcagaatctgcata 19251705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 17850587 - 17850729
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||| || |         |||||||||||||||  |||||||| ||||| ||    
T  17850587 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctat-aaaaaaaagatttagattttgtctctgtaatttaagattctt 17850685  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||    |||| || || |||||||||||||||||||||    
T  17850686 ccacttttgatccctcattccaccacgtcagcagaatctgcata 17850729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 26236473 - 26236330
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||           |||||||||||||||| |||||||||||||| |    
T  26236473 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtc-cttggaaaaaaaagatttagattttgtccctgtaatttcagattct 26236375  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||| ||||    |||| || || ||||| |||||||||||||||    
T  26236374 tccatttttggtccctcattccaccacgtaagcagaatctgcata 26236330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 221
Target Start/End: Complemental strand, 15106443 - 15106302
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||||||||||||||||||  ||||||||||||||| || |||||||| ||||          ||||||||||||||| |||||||||||||| ||    
T  15106443 gggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagtccctgtaaaaaaaa--atttagattttgtccctgtaatttcagattctt 15106346  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||    |||| || || |||||||||| ||||||||||    
T  15106345 ccacttttgatccctcattccaccacgtcagcaaaatctgcata 15106302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 81 - 207
Target Start/End: Original strand, 13254496 - 13254626
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||| ||| ||| |||||||||||||||  ||||||| || ||||         |||||||||||||||| |||||||||||||| |    
T  13254496 agggtaaatacctctttccgttcctgtaatattagcgaattttggttttactccctgtaaaataaaagatttagattttgtccttgtaatttcagattct 13254595  T
Q  181 tccactt----ttcctcctttcatcacgtca 207  Q
    | |||||    ||||||||||||||||||||    
T  13254596 ttcacttttggttcctcctttcatcacgtca 13254626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 34548574 - 34548712
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||||| ||||||||||||| ||||||||| |||||  |||||||||| ||||         ||||||||||||||||||||||||||| ||| ||    
T  34548574 gggtaaatacttcttttcgtccctgtaatattagtgaattttggttttagtccctgt-aaaaaaaagatttagattttgtccatgtaatttcatattgtt 34548672  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctg 217  Q
    |||| |||     |||||||||||||||||| ||||||||    
T  34548673 ccacctttggtcactcctttcatcacgtcagtagaatctg 34548712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 13254811 - 13254758
Alignment:
Q  85 taaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  13254811 taaatatctcttttcgtccctgtaatattagcgaattccggttttagtctctgt 13254758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 23046706 - 23046813
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||| | |||||| |||||||||||||||| |||||| |          ||||||||| ||||| |||||||||||||| |    
T  23046706 agggtaaatacctcttttcgtccttgtaatatgagcgaattccggttttggtctctataaaaaaaataatttagattctgtccctgtaatttcagattct 23046805  T
Q  181 tccacttt 188  Q
    ||||||||    
T  23046806 tccacttt 23046813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 129
Target Start/End: Complemental strand, 23855072 - 23855025
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggtttt 129  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  23855072 gggtaaatacctcttttcgtccctgtaatattagcgaattccggtttt 23855025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 13284716 - 13284613
Alignment:
Q  152 tagattttgtccatgtaatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattc 247  Q
    |||||||||||| ||||||||||||||  |||||||||    |||| ||| | ||||||| |||||||| |||||||| ||||| |||||||| ||||||    
T  13284716 tagattttgtccttgtaatttcagattcctccacttttggtccctcatttaaccacgtcaacagaatctacataaattacgtccttgtaatttaagattc 13284617  T
Q  248 ctcc 251  Q
    ||||    
T  13284616 ctcc 13284613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 20499124 - 20498980
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||| ||||| || ||  ||||||| | |||||||||||||||| ||||         |||||||||||||||| |||||||||||||| |    
T  20499124 agggtaaatacctattttcatctctgaaatattaacaaattccggttttagtcactgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 20499025  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    | |||||||    | || ||||| ||| |||||||||||||||||    
T  20499024 ttcacttttggtccttcatttcaccacatcagcagaatctgcata 20498980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 42670717 - 42670773
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    |||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  42670717 gggttaatacctcttttcgtccctgtaatagtagcgaattccggttttagtccctgt 42670773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 26560555 - 26560697
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||| |||| |||||||||||||| |||||||| |||||| || |||||||| ||||         ||||||||||| |||| |||||||||||||| |    
T  26560555 agggttaatatctcttttcgtccctgtaatattaacgaatttcgattttagtccctgt--aaaaaaagatttagatttagtccctgtaatttcagattct 26560652  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||||||||    |||  || || |||||||||||||||||||||    
T  26560653 tccacttttggtcccttattccaccacgtcagcagaatctgcata 26560697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 22263192 - 22263334
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||| ||||| ||||||| ||||| ||||||||| |||||| ||||||||||||| |         |||||||||||||||| |||||||||| ||| ||    
T  22263192 gggttaatacatcttttcatccctgtaatattagagaattctggttttagtctctat-gaaaaaaagatttagattttgtccctgtaatttcatattctt 22263290  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||    |||  || || |||||||||||||||||||||    
T  22263291 ccacttttggtcccttattccaccacgtcagcagaatctgcata 22263334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 30960052 - 30959998
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    ||||||| |||||| ||||| |||||| |||||||||||||||||||||||||||    
T  30960052 aaagggttaataccacttttggtccctgtaatattagcgaattccggttttagtc 30959998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 12419102 - 12419049
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    |||||| |||||| ||||| |||||| |||||||||||||||||||||||||||    
T  12419102 aagggttaataccacttttggtccctgtaatattagcgaattccggttttagtc 12419049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 12431162 - 12431109
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    |||||| |||||| ||||| |||||| |||||||||||||||||||||||||||    
T  12431162 aagggttaataccacttttggtccctgtaatattagcgaattccggttttagtc 12431109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 23047961 - 23047913
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggtttt 129  Q
    ||||||||||||| ||||||||||| |||||| ||||||||||||||||    
T  23047961 agggtaaatacctattttcgtccctgtaatatgagcgaattccggtttt 23047913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 221
Target Start/End: Complemental strand, 26136195 - 26136052
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt-nnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    |||||||||||||||||||||| | |||||||| |||||| ||||||||||| ||||          |||||||||||||||  |||||||||| ||| |    
T  26136195 gggtaaatacctcttttcgtccttgtaatattaacgaatttcggttttagtc-ctgtaaaaaaaaaagatttagattttgtcattgtaatttcatattct 26136097  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||||||||     ||| || |||||||| |||||||||||||||    
T  26136096 tccacttttgatctctcgttccatcacgtaagcagaatctgcata 26136052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 44099000 - 44098894
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||| |||||||||||||| |||||| ||||||||| |||||| ||  ||||          ||||||||| ||||| |||||||||||||| ||    
T  44099000 gggtaaatatctcttttcgtccctgtaatatgagcgaattctggttttggttcctgtaaaaaaaataatttagattatgtccctgtaatttcagattctt 44098901  T
Q  182 ccacttt 188  Q
    |||||||    
T  44098900 ccacttt 44098894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 30390463 - 30390566
Alignment:
Q  86 aaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttccac 185  Q
    ||||| |||||||||||| | |||||||||||||||||| ||||| || ||||          | ||||||||||||| |||||||||| ||| ||||||    
T  30390463 aaatatctcttttcgtccatgtaatattagcgaattccgattttaatccctgtaaaaaaaaaaaattagattttgtccctgtaatttcatattcttccac 30390562  T
Q  186 tttt 189  Q
    ||||    
T  30390563 tttt 30390566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 30958684 - 30958740
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    |||| |||||| ||||| |||||| ||||||||||||||| ||||||||||| ||||    
T  30958684 gggttaataccacttttggtccctgtaatattagcgaatttcggttttagtccctgt 30958740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 13284411 - 13284461
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttag 131  Q
    ||||| |||||| ||||| |||||| |||||| ||||||||||||||||||    
T  13284411 agggttaataccactttttgtccctgtaatatcagcgaattccggttttag 13284461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 33290427 - 33290377
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggtttta 130  Q
    |||||| |||||| ||||| |||||| |||||||||||||||| |||||||    
T  33290427 aagggttaataccgcttttggtccctgtaatattagcgaattctggtttta 33290377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 18278999 - 18278926
Alignment:
Q  3 acaaaaactaaaattcttcttcctcactaagcgacatcacaacttttcgtttcagatactaattgtctaaaata 76  Q
    ||||||||||||||| || |||||||||||   || ||||||||||| || ||| |||| |||||| |||||||    
T  18278999 acaaaaactaaaatttttgttcctcactaaatcacgtcacaactttttgtctcacatacaaattgtataaaata 18278926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 249
Target Start/End: Complemental strand, 30390671 - 30390634
Alignment:
Q  212 aatctgcataaatttcgtccctgtaatttcagattcct 249  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  30390671 aatctgcataaattatgtccctgtaatttcagattcct 30390634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 13284779 - 13284735
Alignment:
Q  94 cttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    ||||| |||||| ||||||||||||||| ||||||||||| ||||    
T  13284779 cttttggtccctgtaatattagcgaatttcggttttagtccctgt 13284735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 39878402 - 39878337
Alignment:
Q  160 gtccatgtaatttcagatttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||| ||||||||||||||||| |||||||    |||| ||||| |||| ||||||||||||||||    
T  39878402 gtccctgtaatttcagattttttcacttttggtccctcatttcaccacgccagcagaatctgcata 39878337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 39878450 - 39878395
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    ||||||||||||||||| |||| | ||||||||||||||||| ||||| ||| ||||    
T  39878450 gggtaaatacctctttttgtcc-tgtaatattagcgaattccagttttcgtccctgt 39878395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 4e-44; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 82 - 251
Target Start/End: Complemental strand, 39826424 - 39826255
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||||||||||||||||| | ||||||||||||||| ||||||||||| ||||         |||||||||||||||| |||||||||||||| ||    
T  39826424 gggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 39826325  T
Q  182 ccacttttcctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||  ||||||||||||||||||| ||||||||| |||| ||||| |||||||| ||||||||||    
T  39826324 ccacttttggtcctttcatcacgtcagcaaaatctgcatcaattacgtccttgtaattttagattcctcc 39826255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 82 - 251
Target Start/End: Complemental strand, 4907340 - 4907167
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||| || ||||| ||||| ||||||||||||||||| ||||||||| ||||         |||||||||||||||| |||||||||||||| ||    
T  4907340 gggtaaatatctattttcctccctgtaatattagcgaattccagttttagtccctgtaaaataaaagatttagattttgtccctgtaatttcagattctt 4907241  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  4907240 ccacttttggtccctcctttcatcacgtcagtagaatctgcataaattacgtccctgtaatttcagattcctcc 4907167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 82 - 251
Target Start/End: Original strand, 8292804 - 8292977
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||| |||||||||||||| || ||||||||||| |||||||||||| ||||         |||||||||||||||| || ||||||| ||| ||    
T  8292804 gggtaaataactcttttcgtccctgtactattagcgaatcccggttttagtccctgtaaaataaaagatttagattttgtccctgaaatttcatattctt 8292903  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8292904 ccacttttggttcctcttttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcc 8292977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 82 - 255
Target Start/End: Complemental strand, 34749483 - 34749306
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||||||||||| ||| || |||||||| ||||||||| ||||||||  |||         |||||||||||| ||| |||||||||||||| ||    
T  34749483 gggtaaatacctctttttgtctctgtaatattatcgaattccgattttagtccttgtaaaaaaaaagatttagattttatccctgtaatttcagattctt 34749384  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctccactt 255  Q
    ||||||||    |||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  34749383 ccacttttggtacctcctttaatcacgtcagcagaatctgcataaattacatccctgtaatttcagattcctccactt 34749306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 79 - 251
Target Start/End: Original strand, 18462283 - 18462458
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||         |||||||||||||||| ||||||||||||||    
T  18462283 aaagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcagatt 18462381  T
Q  179 tttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
     ||||| ||||    ||||||||||||| ||||  |||||||||||||||| ||||  |||||||||| ||||||||    
T  18462382 cttccatttttggtccctcctttcatcaagtcattagaatctgcataaattacgtcattgtaatttcatattcctcc 18462458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 79 - 251
Target Start/End: Complemental strand, 33629071 - 33628895
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||| |||||||||||| |||||| ||||||||||||||||||||||||||| ||||          | || |||||||||| ||||||||||||||    
T  33629071 aaagggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaatttgattttgtccctgtaatttcagatt 33628972  T
Q  179 tttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
     ||||||||||    |||||||| |||||||||||||||||| ||||||||  ||||||||||||||| ||||||||    
T  33628971 cttccacttttggtccctcctttaatcacgtcagcagaatctacataaattatgtccctgtaatttcaaattcctcc 33628895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 82 - 251
Target Start/End: Original strand, 39711074 - 39711245
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||||||||||||||||  | ||||||||||||||||||||||||||| ||||         |||||||||||||||| |||||||||| ||| ||    
T  39711074 gggtaaatacctcttttcgtct-tgtaatattagcgaattccggttttagtccctgtaaaaaaaa-gatttagattttgtccttgtaatttcatattctt 39711171  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||    |||||||| ||||||||||||||||||||||||||| ||||| |||||||||| ||||||||    
T  39711172 ccacttttggtccctcctttaatcacgtcagcagaatctgcataaattacgtccttgtaatttcatattcctcc 39711245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 80 - 251
Target Start/End: Original strand, 30299230 - 30299404
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    |||||||||||||||||||||||||| ||||||||||||| | || |||||||| ||||         |||||||||||||||| |||||||||| |||     
T  30299230 aagggtaaatacctcttttcgtccctgtaatattagcgaacttcgattttagtc-ctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 30299328  T
Q  180 ttccacttttc----ctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||||     |||||||||||| |||| |||||||| |||||||| |||||||||||||||||||||||||    
T  30299329 ttccacttttggtctctcctttcatcaagtcaacagaatctccataaattacgtccctgtaatttcagattcctcc 30299404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 29696564 - 29696737
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||         ||||||||||||||||  ||||||||| ||| |    
T  29696564 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgt-aaaaaaaagatttagattttgtccccgtaatttcatattct 29696662  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||||     ||||||||||||| || ||||||||||||||||||  |||||| |||||||| ||||||||    
T  29696663 tccactttttgtcactcctttcatcacatcggcagaatctgcataaattatgtccctataatttcatattcctcc 29696737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 80 - 251
Target Start/End: Complemental strand, 52058388 - 52058216
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    |||||||||||||||||||||||||| |||||||||||||||  |||||||||  ||||         |||||||||| ||||| ||||||||||||||     
T  52058388 aagggtaaatacctcttttcgtccctgtaatattagcgaattttggttttagttcctgtagaaaaaaagatttagattatgtccctgtaatttcagattc 52058289  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||||    |||||||||||||||||||   |||||||||||||| ||||||| | |||||||||||||||    
T  52058288 ttccacttttggtccctcctttcatcacgtcag---aatctgcataaattacgtccctatgatttcagattcctcc 52058216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 79 - 251
Target Start/End: Original strand, 24467626 - 24467801
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||  |||||||| ||||         |||||||||||||||| ||||||||||||||    
T  24467626 aaagggtaaatacatcttttcgtccctgtaatattagcgaattccaattttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcagatt 24467724  T
Q  179 tttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
     ||||||||||    ||||||||||||| ||||  |||||||||||||||| ||||  |||||||||| ||||||||    
T  24467725 cttccacttttggtccctcctttcatcaagtcattagaatctgcataaattacgtcattgtaatttcatattcctcc 24467801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 85 - 251
Target Start/End: Original strand, 17606307 - 17606481
Alignment:
Q  85 taaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnn----gatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||| ||||             |||||||||||||| | |||||||||| ||| |    
T  17606307 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaaaagatttagattttgttcctgtaatttcatattct 17606406  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||||    |||| ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||    
T  17606407 tccacttttggtccctcatttcatcacgtcagcagaatctgtataaattacgtccctgtaatttcatattcctcc 17606481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 82 - 251
Target Start/End: Original strand, 48071961 - 48072134
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||| |||| |||||||||| | | |||||||||||||||| |||||||||  ||||         |||||||||||||||| |||||||||| ||| ||    
T  48071961 gggttaatatctcttttcgttcatgtaatattagcgaattctggttttagttcctgtaataaaaaagatttagattttgtccctgtaatttcatattatt 48072060  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||    |||||||||||||| |||||||||| |||||||||| |||||||||||||||| ||||||||    
T  48072061 ccacttttgctccctcctttcatcacatcagcagaatatgcataaattacgtccctgtaatttcaaattcctcc 48072134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 43539349 - 43539520
Alignment:
Q  84 gtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttcc 183  Q
    ||||||| |||||||| ||| | ||| |||||| ||||||| ||||||||  |||         |||||||||||||||| |||||||| | ||| ||||    
T  43539349 gtaaatatctcttttcatccatgtaagattagcaaattccgattttagtccttgtaaaaaaaacgatttagattttgtccctgtaattttatattgttcc 43539448  T
Q  184 actttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  43539449 acttttggtccctcctttcatcacgtcagcagaatctgcataaattacgtccctgtaattttagattcctcc 43539520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 251
Target Start/End: Complemental strand, 39971024 - 39970850
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnn-gatttagattttgtccatgtaatttcagatttt 180  Q
    |||||||||||||||||||||| | |||||||| |||||| ||||||||||| ||||          |||||||||||||||| |||||||| ||||  |    
T  39971024 gggtaaatacctcttttcgtccatgtaatattaacgaatttcggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaattttagatcct 39970925  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||||    ||| |||||||||||||||||||||| |||||||||  ||||||| ||||| ||||||||||    
T  39970924 tccacttttggtcccttctttcatcacgtcagcagaatccgcataaattgtgtccctgaaattttagattcctcc 39970850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 80 - 221
Target Start/End: Original strand, 39826048 - 39826193
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    |||||||||||||||||||||||| ||||||||||||||||| || |||||||| ||||         |||||||||||||||| ||||||||||||||     
T  39826048 aagggtaaatacctcttttcgtccatataatattagcgaatttcgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattc 39826147  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||||    |||| || || ||||| |||||||||||||||    
T  39826148 ttccacttttgatccctcattccaccacgttagcagaatctgcata 39826193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 45981417 - 45981493
Alignment:
Q  5 aaaaactaaaattcttcttcctcactaagcgacatcacaacttttcgtttcagatactaattgtctaaaatattaaa 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||||    
T  45981417 aaaaactaaaattcttcttcctcactaaacgacatcacaacttttcgtttcagatacaaattatctaaaagattaaa 45981493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 17606686 - 17606579
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||         |||||||||||||||| ||||||||||||||     
T  17606686 aagggttaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt--aaaaaaagatttagattttgtccttgtaatttcagattc 17606589  T
Q  180 ttccactttt 189  Q
    ||||||||||    
T  17606588 ttccactttt 17606579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 70 - 189
Target Start/End: Complemental strand, 39711462 - 39711343
Alignment:
Q  70 taaaatattaaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaa 169  Q
    |||||| || |||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||         ||||||||||||||||  ||||    
T  39711462 taaaattttcaagggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccgtaa 39711363  T
Q  170 tttcagatttttccactttt 189  Q
    ||||| ||| ||||||||||    
T  39711362 tttcatattcttccactttt 39711343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 52058011 - 52058154
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||||||| |||||         |||||||| | ||||| |||||||||||||| ||    
T  52058011 gggtaaatacctcttttcgtccttgtaatattaacgaattccggttttagtttctgtaaaaaaaaagatttagactatgtccctgtaatttcagattctt 52058110  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||    |||| ||||| ||| |||||||||||||||||    
T  52058111 ccacttttggtccctcatttcaccacatcagcagaatctgcata 52058154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 221
Target Start/End: Original strand, 4906960 - 4907105
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    |||||||||||||||||||||||||| ||||||||| ||||||  ||||||||| ||||         |||||||||||||||| |||||||||| |||     
T  4906960 aagggtaaatacctcttttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaatgatttagattttgtccctgtaatttcatattc 4907059  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||||    |||| || || ||||||||| |||||||||||    
T  4907060 ttccacttttggtccctcattccaccacgtcagccgaatctgcata 4907105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 20995785 - 20995842
Alignment:
Q  194 ctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20995785 ctttcatcacgtcagcagaatctgcataaattacgtccctgtaatttcagattcctcc 20995842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 221
Target Start/End: Complemental strand, 24468002 - 24467862
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||||||||||||   | | ||||||||| ||||||||||||||||| ||||         |||||||||||||||| |||||||||||||| ||    
T  24468002 gggtaaatacctcttttc---catgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 24467906  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||    |||| ||||| |||||||| ||||||||||||    
T  24467905 ccacttttggtccctcatttcaccacgtcagtagaatctgcata 24467862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 189
Target Start/End: Original strand, 33628689 - 33628797
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||| | ||         ||||||||||||||||  ||||||||||||| |    
T  33628689 agggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccccgtaaaaaaaaagatttagattttgtccccgtaatttcagattct 33628788  T
Q  181 tccactttt 189  Q
    | |||||||    
T  33628789 ttcactttt 33628797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 251
Target Start/End: Complemental strand, 42510388 - 42510219
Alignment:
Q  87 aatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnnga-tttagattttgtccatgtaatttcagatttttccac 185  Q
    |||||| ||||| |||||| |||||||||||||||||||||||||||  |||          | |||||||| |  || | |||||||||||| ||||||    
T  42510388 aataccacttttggtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaaaaatttagattctacccctataatttcagattcttccac 42510289  T
Q  186 tttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    || |    |||| ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  42510288 ttgtattccctcatttcatcacgtcagcagaatctgcataaattacacccctgtaatttcagattcctcc 42510219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 250
Target Start/End: Original strand, 13229803 - 13229904
Alignment:
Q  153 agattttgtccatgtaatttcagatttttccacttttc----ctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcc 248  Q
    ||||||||| | |||||||||| ||| ||||||||||     |||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||    
T  13229803 agattttgtgcttgtaatttcatattcttccacttttgatcactcctttcatcaagtcaacataatctgcataaattacgtccctgtaatttcagattcc 13229902  T
Q  249 tc 250  Q
    ||    
T  13229903 tc 13229904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 220
Target Start/End: Complemental strand, 29696937 - 29696794
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    ||||||||||||||||||||||   | ||||||||||||||||||||||||||| ||||          | ||||||||||||||||||||||||||||     
T  29696937 aagggtaaatacctcttttcgtttatgtaatattagcgaattccggttttagtcactgtaaaaaaaaa-aattagattttgtccatgtaatttcagattc 29696839  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcat 220  Q
    ||||||||||    |||| || || ||||| ||||||||||||||    
T  29696838 ttccacttttggtccctcattccaccacgtaagcagaatctgcat 29696794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 48072340 - 48072196
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||  | ||||||||| |||||||||||||||||  |||          ||||||||| ||||| |||||||||| ||| |    
T  48072340 agggtaaatacctcttttcgtcattgtaatattagtgaattccggttttagtccttgtaaaaaaaaatatttagattatgtccctgtaatttcatattct 48072241  T
Q  181 tccacttt----tcctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||    ||||| ||||| |||||||||||||||||||||    
T  48072240 tccacttttgggtcctcatttcaccacgtcagcagaatctgcata 48072196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 8293188 - 8293078
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt-nnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||||||||||||||||||||||||||||||| |||||||  ||||||||| ||||          |||||||||||||||| |||||||||| |||    
T  8293188 aagggtaaatacctcttttcgtccctataatattaacgaattctagttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatatt 8293089  T
Q  179 tttccactttt 189  Q
     ||||||||||    
T  8293088 cttccactttt 8293078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 18462666 - 18462519
Alignment:
Q  78 taaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagat 177  Q
    ||||||| |||||||||||||| ||||| |||||||||| |||||||||||||||   |||         ||||||||||||||||  ||||||||||||    
T  18462666 taaagggcaaatacctcttttcctccctgtaatattagcaaattccggttttagttcttgtataaaaaaagatttagattttgtccccgtaatttcagat 18462567  T
Q  178 ttttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    | ||||||||||     ||| ||||| ||||||| |||||||||||||    
T  18462566 tcttccacttttggtctctcatttcaccacgtcaacagaatctgcata 18462519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 20995697 - 20995754
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    ||||||||||||||||||| || || ||||||||||||||||||||||||||| ||||    
T  20995697 agggtaaatacctcttttcatctctgtaatattagcgaattccggttttagtccctgt 20995754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 18342395 - 18342339
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||    
T  18342395 gggtaaataccttttttcgtccctgtaatattagcgaatttcggttttagtccctgt 18342339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 189
Target Start/End: Complemental strand, 30252279 - 30252169
Alignment:
Q  81 agggtaaatacctcttttc--gtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||||||||||||| |  ||||||||||||||||||||||| |||||||||| ||||         ||||||||||||||||  ||||||||| |||    
T  30252279 agggtaaatacctctttccttgtccctataatattagcgaattctggttttagtccctgtaaaaataaagatttagattttgtccccgtaatttcatatt 30252180  T
Q  179 tttccactttt 189  Q
     ||||| ||||    
T  30252179 cttccattttt 30252169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 30299609 - 30299502
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    |||||||||||| |||||||| || |||||||||| |||| ||||||||||  ||||         |||||||||||||||| |||||||| ||||| ||    
T  30299609 gggtaaatacctattttcgtctctgtaatattagcaaatttcggttttagttcctgtaaaaaaaaagatttagattttgtccctgtaattttagattctt 30299510  T
Q  182 ccactttt 189  Q
    ||||||||    
T  30299509 ccactttt 30299502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 39970645 - 39970789
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnn-gatttagattttgtccatgtaatttcagatttt 180  Q
    |||||||||||||||||||||| | |||||||| |||||| |  ||||| |||||||          ||||||||||||||| ||||||||||||||| |    
T  39970645 gggtaaatacctcttttcgtccatgtaatattaacgaatttcaattttaatctctgtaaaaaaaaaagatttagattttgtctatgtaatttcagattct 39970744  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||||||||    |||| || || |||||||||| ||||||||||    
T  39970745 tccacttttggtccctcattccaccacgtcagcaaaatctgcata 39970789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 13230110 - 13230056
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctct 136  Q
    ||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||    
T  13230110 gggtaaatacctcttttcgtctctgaaatattagcgaatttcggttttagtctct 13230056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 17500768 - 17500825
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    ||||| ||||||  |||| |||||| ||||||||||||||||||||||||||||||||    
T  17500768 agggttaataccatttttggtccctgtaatattagcgaattccggttttagtctctgt 17500825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 43400752 - 43400809
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||||||| ||| ||||    
T  43400752 agggttaatacctcttttcgtctctataatatgagcgaattccggttttggtccctgt 43400809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 43539732 - 43539675
Alignment:
Q  75 tattaaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagt 132  Q
    |||| |||||| |||| |||||||||||||| |||||||||| |||||||||||||||    
T  43539732 tatttaagggttaatagctcttttcgtccctgtaatattagcaaattccggttttagt 43539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 27039637 - 27039685
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggtttt 129  Q
    ||||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  27039637 agggttaatacctcttttcgtccctgtaatatgagcgaattccggtttt 27039685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 42510034 - 42510157
Alignment:
Q  101 tccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttccactttt----cctcctt 196  Q
    ||||| |||||||||||||||||||||||| || ||||          ||||||||||||||| |||||||||| ||| ||||||||||    |||| ||    
T  42510034 tccctgtaatattagcgaattccggttttaatccctgtaaaaaaata-atttagattttgtccctgtaatttcatattcttccacttttagtccctcatt 42510132  T
Q  197 tcatcacgtcagcagaatctgcata 221  Q
    ||| ||| |||||||||||||||||    
T  42510133 tcaccacatcagcagaatctgcata 42510157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 16294258 - 16294163
Alignment:
Q  149 atttagattttgtccatgtaatttcagatttttccacttttcctcc----tttcatcacgtcagcagaatctgcataaatttcgtccctgtaattt 240  Q
    ||||||||||||||| |||||||||| |||  |||||||||  |||    ||| | || ||||||||||||| |||||||| ||||||||||||||    
T  16294258 atttagattttgtccttgtaatttcatattcctccacttttggtcccttatttaaccatgtcagcagaatctacataaattacgtccctgtaattt 16294163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 133
Target Start/End: Original strand, 34749136 - 34749189
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    |||||||||||| ||||||| ||||| |||||||||||||||| | ||||||||    
T  34749136 aagggtaaatacatcttttcatccctgtaatattagcgaattctgattttagtc 34749189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 221
Target Start/End: Complemental strand, 20996047 - 20995903
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    |||||| |||||||||||| |||||| |||||||||||||||   |||||||||  |||         |||||||||||||||  |||||||||| |||     
T  20996047 aagggttaatacctctttttgtccctgtaatattagcgaattttagttttagtccatgt-aaaaaaaagatttagattttgtctctgtaatttcatattc 20995949  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||||    |||  || || |||||||||||||||||||||    
T  20995948 ttccacttttggtcccttattccaccacgtcagcagaatctgcata 20995903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 30780321 - 30780265
Alignment:
Q  199 atcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctccactt 255  Q
    ||||||||||||||||||| ||||||| ||||  |||||||||| ||||||| ||||    
T  30780321 atcacgtcagcagaatctgtataaattacgtcattgtaatttcatattcctcaactt 30780265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 37236723 - 37236769
Alignment:
Q  87 aatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    |||| ||||||| |||||| |||||| ||||||||||||||||||||    
T  37236723 aatatctcttttggtccctgtaatatgagcgaattccggttttagtc 37236769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 251
Target Start/End: Original strand, 1409 - 1583
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattt 179  Q
    ||||||||||||||||||||| |||  ||||||| ||||||| || |||||||| ||||         |||||||||| ||||| ||||||||||||||     
T  1409 aagggtaaatacctcttttcgacccggtaatatttgcgaatttcgattttagtccctgtaaaaaaaa-gatttagattatgtccctgtaatttcagattc 1507  T
Q  180 ttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||||    ||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||    
T  1508 ttccacttttggtccctcctttcatcacgtcagcagaatctacataaattacgtccctataatttcagattcctcc 1583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 1785 - 1733
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  1785 agggtaaatccctcttttcgtccctgtaatattaacgaattccggttttagtc 1733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 221
Target Start/End: Complemental strand, 12355 - 12217
Alignment:
Q  87 aatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttccact 186  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| || |         |||||||||||||||| |||||||||||||| |||||||    
T  12355 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 12256  T
Q  187 ttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||    | ||||||||||||||||||||||||||||||    
T  12255 tttggtccatcctttcatcacgtcagcagaatctgcata 12217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 80 - 251
Target Start/End: Original strand, 4560 - 4736
Alignment:
Q  80 aagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnn-gatttagattttgtccatgtaatttcagatt 178  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||||| ||||          |||||| ||||||||| |||||||| |||||    
T  4560 aagggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttgagatt 4659  T
Q  179 tttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
     ||| ||||||    |||||||| |||| |||| ||||||||||||||||| ||||| |||||||||||||||||||    
T  4660 cttctacttttggtccctccttttatcaagtcaacagaatctgcataaattacgtccgtgtaatttcagattcctcc 4736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 4941 - 4798
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||| || ||||         |||||||||||||||| |||||||||| ||| |    
T  4941 agggtaaatacctcttttcgtccctgtaatattagcaaattccggttttaatccctgt-aaaaataagatttagattttgtccttgtaatttcatattct 4843  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    |||||||||    |||| || || ||||| |||||||||||||||    
T  4842 tccacttttggtccctcattccaccacgtaagcagaatctgcata 4798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 79 - 249
Target Start/End: Complemental strand, 7581 - 7406
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt-nnnnnnnnngatttagattttgtccatgtaatttcagat 177  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||          |||||||||||||||| |||||||||||||    
T  7581 aaagggtaaatacctattttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagat 7482  T
Q  178 ttttccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcct 249  Q
    | ||| ||||||      ||||||||||| |||| || |||||||||||||| | ||| |||||||||||||||||    
T  7481 tcttctacttttggtctatcctttcatcaagtcaacaaaatctgcataaattacatccttgtaatttcagattcct 7406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 7227 - 7332
Alignment:
Q  83 ggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttttc 182  Q
    ||||||||||||||||||||| | |||||||||||||||| ||| |||||  ||||         |||||||||||||||| |||||||||| ||| |||    
T  7227 ggtaaatacctcttttcgtccttgtaatattagcgaattctggtgttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 7326  T
Q  183 cacttt 188  Q
    ||||||    
T  7327 cacttt 7332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 8324 - 8496
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||| | ||         ||||||||||||||||  ||||  ||||||| |    
T  8324 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccccgtaaataaaaagatttagattttgtcccagtaa--tcagattct 8421  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    | |||||||     ||||||||||||||||| || ||||||||| |||| |||||||||||||||||||||||||    
T  8422 ttcacttttggtctctcctttcatcacgtcaacaaaatctgcatcaattacgtccctgtaatttcagattcctcc 8496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 221
Target Start/End: Complemental strand, 8700 - 8557
Alignment:
Q  82 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagattttt 181  Q
    ||||||||||  ||||| || |||  |||||||||||||||||||||||||| || |         |||||||||||||||| |||||||| ||||| ||    
T  8700 gggtaaatactgctttttgttcctgcaatattagcgaattccggttttagtccctttaaaaaaaaagatttagattttgtccctgtaattttagattctt 8601  T
Q  182 ccactttt----cctcctttcatcacgtcagcagaatctgcata 221  Q
    ||||||||    |||| || || |||||||||||||||||||||    
T  8600 ccacttttggtccctcattccaccacgtcagcagaatctgcata 8557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 16007 - 15838
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    |||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||          |   ||||||||||| |||||||||| ||| |    
T  16007 agggtaaatatctcttttcgtccatgtaatattagcgaattccggttttagtctctgtaaaaaa----aaaaagattttgtccctgtaatttcatattct 15912  T
Q  181 tccactttt----cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    | |||||||     ||||||||||||||||||||||||||||||||| ||   | ||||||||||||||||||||    
T  15911 ttcacttttggtctctcctttcatcacgtcagcagaatctgcataaa-ttatacgctgtaatttcagattcctcc 15838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 79 - 251
Target Start/End: Complemental strand, 598 - 425
Alignment:
Q  79 aaagggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatt 178  Q
    ||||||||||||||||||||  || ||  ||||||| ||||||||||||||| || ||||         |||||||||||||| |  |||||||||||||    
T  598 aaagggtaaatacctctttttatctctggaatattaacgaattccggttttactccctgtaaaataaaagatttagattttgttc--gtaatttcagatt 501  T
Q  179 tttccacttttc----ctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
     ||||||||||     ||||||| ||||| ||||||||||||||||||||| ||| | |||||||||||||||||||    
T  500 attccacttttggtatctcctttaatcacatcagcagaatctgcataaattacgt-cttgtaatttcagattcctcc 425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 3868 - 3973
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgtnnnnnnnnngatttagattttgtccatgtaatttcagatttt 180  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||         |||||||||| ||||| |||||||||| ||| |    
T  3868 agggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattatgtccctgtaatttcaaattct 3967  T
Q  181 tccact 186  Q
    ||||||    
T  3968 tccact 3973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 4135 - 4074
Alignment:
Q  190 cctcctttcatcacgtcagcagaatctgcataaatttcgtccctgtaatttcagattcctcc 251  Q
    ||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  4135 cctcctttcatcacgtcagcagaatctgcataaattatgtctctgtaatttcagattcctcc 4074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 6058 - 6001
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtctctgt 138  Q
    |||||||||||||||||| ||||||  ||||||||||||||||| |||||||| ||||    
T  6058 agggtaaatacctcttttggtccctgcaatattagcgaattccgattttagtccctgt 6001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 4666 - 4718
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    |||||||||||||||||| ||||||  |||||||||||||||| |||||||||    
T  4666 agggtaaatacctcttttagtccctgcaatattagcgaattccagttttagtc 4718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 4879 - 4931
Alignment:
Q  81 agggtaaatacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    |||||||||||||||||| || ||| ||||||||||||||| |||||||||||    
T  4879 agggtaaatacctctttttgttcctgtaatattagcgaatttcggttttagtc 4931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 5128 - 5078
Alignment:
Q  78 taaagggtaaatacctcttttcgtccctataatattagcgaattccggtttt 129  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||||||||    
T  5128 taaagggtaaatacc-cttttcgtccatgtaatattagcgaattccggtttt 5078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 274 - 229
Alignment:
Q  88 atacctcttttcgtccctataatattagcgaattccggttttagtc 133  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||||    
T  274 ataccacttttagtccctataatattagcgaattccagttttagtc 229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University