View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12696_low_7 (Length: 273)
Name: NF12696_low_7
Description: NF12696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12696_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 10 - 259
Target Start/End: Original strand, 10341111 - 10341359
Alignment:
| Q |
10 |
tatatcacccttgacatttgtcattttcattagatgttaggtatttagtcatataagcaacnnnnnnnggagtgatggtggttacaaagagttgtttctt |
109 |
Q |
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| T |
10341111 |
tatatcacccttgacatttgtcattttcattagatgttaggtatttagtcatataagcaacaaaaaaaggagtgatggtggttacaaagagttgtttctt |
10341210 |
T |
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| Q |
110 |
tcaatgattgagggtttcatgatggttttaataaatcaacaaagctaaggaagtagttctggtatggtccaaaagggtgaccaaacctgcaccacttggg |
209 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |
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| T |
10341211 |
tcaatgattgagggtttcatgatggttt-aataaatcaacaaagctaaggaagtagttctggtatagtccaaaagggtgaccaaacctgcaccaattggg |
10341309 |
T |
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| Q |
210 |
tgggccagattgtctgagatccactttgagattgagttgagcttatggtg |
259 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10341310 |
tgggccagattgtctgagatccactttgagattgagttgagcttatggtg |
10341359 |
T |
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