View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1269_low_15 (Length: 261)
Name: NF1269_low_15
Description: NF1269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1269_low_15 |
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Alignment Details
Target: chr2 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41177555 - 41177670
Alignment:
| Q |
1 |
aaatgctgaaaaagtggtagtggccaaaatgtacaacttctatttagatctcactccaataaaattaaaaatccaaatattatagagccaccaaaatcta |
100 |
Q |
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| T |
41177555 |
aaatgcggaaaaagtggtagtggccaaaatgtacaacttctatttagatctcactccaataaaattaaaaatccaaatattatagagccaccaaaatcta |
41177654 |
T |
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| Q |
101 |
aatttagcaaagaaag |
116 |
Q |
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|||||||||||||||| |
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| T |
41177655 |
aatttagcaaagaaag |
41177670 |
T |
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