View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1269_low_20 (Length: 253)

Name: NF1269_low_20
Description: NF1269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1269_low_20
NF1269_low_20
[»] chr7 (29 HSPs)
chr7 (31-251)||(36150839-36151059)
chr7 (35-251)||(43257300-43257516)
chr7 (39-185)||(27508576-27508721)
chr7 (35-185)||(38761126-38761276)
chr7 (131-251)||(27508699-27508819)
chr7 (75-179)||(6441484-6441588)
chr7 (132-251)||(5080145-5080264)
chr7 (132-251)||(14197495-14197614)
chr7 (88-179)||(14197599-14197690)
chr7 (35-178)||(5080250-5080393)
chr7 (134-251)||(15000772-15000889)
chr7 (131-251)||(6441381-6441500)
chr7 (36-180)||(15000641-15000786)
chr7 (175-247)||(15272363-15272435)
chr7 (131-251)||(38761029-38761148)
chr7 (132-207)||(45012928-45013003)
chr7 (131-251)||(3404580-3404699)
chr7 (43-143)||(15272326-15272426)
chr7 (50-185)||(37787821-37787952)
chr7 (184-252)||(27508611-27508679)
chr7 (184-252)||(38761168-38761236)
chr7 (40-112)||(45013078-45013150)
chr7 (131-198)||(37787776-37787843)
chr7 (129-176)||(45012991-45013038)
chr7 (34-180)||(3404452-3404597)
chr7 (184-251)||(6441520-6441587)
chr7 (40-143)||(15000822-15000925)
chr7 (40-141)||(3404634-3404735)
chr7 (35-112)||(29934474-29934551)
[»] chr4 (66 HSPs)
chr4 (33-251)||(22017918-22018136)
chr4 (37-180)||(55382695-55382838)
chr4 (34-185)||(2634158-2634309)
chr4 (35-180)||(10380734-10380879)
chr4 (36-249)||(8951058-8951271)
chr4 (38-176)||(37695075-37695213)
chr4 (36-185)||(30470952-30471101)
chr4 (127-251)||(9826751-9826875)
chr4 (39-185)||(5448195-5448341)
chr4 (127-227)||(18830634-18830734)
chr4 (33-185)||(47943582-47943734)
chr4 (131-230)||(5324740-5324839)
chr4 (136-251)||(5448324-5448439)
chr4 (132-251)||(37694936-37695055)
chr4 (131-237)||(2634074-2634180)
chr4 (132-230)||(47943505-47943603)
chr4 (38-190)||(29908887-29909039)
chr4 (132-251)||(2063270-2063389)
chr4 (127-206)||(10380676-10380755)
chr4 (132-251)||(10757606-10757725)
chr4 (132-251)||(10970777-10970896)
chr4 (111-230)||(18500701-18500820)
chr4 (38-180)||(2063144-2063286)
chr4 (34-185)||(18830708-18830855)
chr4 (132-209)||(11821847-11821924)
chr4 (37-185)||(18500596-18500743)
chr4 (88-179)||(3370013-3370104)
chr4 (132-251)||(12140703-12140822)
chr4 (132-251)||(30470854-30470973)
chr4 (75-174)||(18836423-18836523)
chr4 (173-251)||(3391172-3391250)
chr4 (36-179)||(1387482-1387626)
chr4 (132-200)||(47144813-47144881)
chr4 (132-247)||(1387319-1387433)
chr4 (40-143)||(12140667-12140770)
chr4 (35-110)||(47463809-47463884)
chr4 (53-179)||(11821736-11821862)
chr4 (40-109)||(30378948-30379017)
chr4 (131-247)||(2232412-2232527)
chr4 (140-196)||(18836370-18836426)
chr4 (40-143)||(2063322-2063425)
chr4 (168-251)||(47463850-47463933)
chr4 (184-251)||(47943624-47943691)
chr4 (132-179)||(55382664-55382711)
chr4 (40-110)||(10757570-10757640)
chr4 (40-110)||(10970741-10970811)
chr4 (35-185)||(30378738-30378887)
chr4 (131-251)||(30378865-30378981)
chr4 (131-185)||(37695034-37695088)
chr4 (35-81)||(47463927-47463973)
chr4 (184-252)||(37695108-37695176)
chr4 (40-143)||(5448372-5448475)
chr4 (150-185)||(12140801-12140836)
chr4 (200-251)||(18830766-18830817)
chr4 (88-143)||(47144865-47144920)
chr4 (184-251)||(55382732-55382799)
chr4 (60-147)||(55604370-55604456)
chr4 (131-185)||(5324817-5324871)
chr4 (139-185)||(10757704-10757750)
chr4 (139-185)||(10970875-10970921)
chr4 (60-185)||(2232505-2232629)
chr4 (40-185)||(9826632-9826777)
chr4 (148-185)||(47144765-47144802)
chr4 (75-143)||(3391183-3391251)
chr4 (35-115)||(11821931-11822011)
chr4 (43-143)||(22017885-22017985)
[»] chr3 (41 HSPs)
chr3 (40-251)||(26498584-26498795)
chr3 (38-251)||(38498133-38498346)
chr3 (35-185)||(48755322-48755472)
chr3 (35-247)||(20758954-20759166)
chr3 (34-180)||(1426478-1426624)
chr3 (35-179)||(15031183-15031327)
chr3 (132-251)||(15031344-15031463)
chr3 (35-185)||(33343001-33343150)
chr3 (134-251)||(14434676-14434793)
chr3 (127-251)||(18445441-18445565)
chr3 (36-144)||(42453039-42453147)
chr3 (36-185)||(21514740-21514889)
chr3 (121-249)||(26920268-26920396)
chr3 (132-251)||(48755451-48755571)
chr3 (132-251)||(11989081-11989200)
chr3 (133-251)||(44967980-44968097)
chr3 (125-230)||(33343122-33343226)
chr3 (33-118)||(39541667-39541752)
chr3 (146-251)||(41984941-41985046)
chr3 (127-247)||(21514863-21514983)
chr3 (33-185)||(43562734-43562886)
chr3 (40-143)||(15031396-15031499)
chr3 (131-196)||(7300142-7300207)
chr3 (71-182)||(11989182-11989293)
chr3 (35-112)||(33412199-33412276)
chr3 (146-251)||(39541748-39541853)
chr3 (121-185)||(15005039-15005103)
chr3 (132-247)||(1426608-1426714)
chr3 (132-251)||(15005082-15005201)
chr3 (34-185)||(44967849-44968000)
chr3 (184-251)||(15031224-15031291)
chr3 (132-179)||(15031312-15031359)
chr3 (40-143)||(26498548-26498651)
chr3 (133-179)||(43562708-43562754)
chr3 (184-252)||(26498692-26498760)
chr3 (40-143)||(38498279-38498382)
chr3 (88-143)||(44968031-44968086)
chr3 (89-143)||(20759103-20759157)
chr3 (36-182)||(26920152-26920297)
chr3 (127-179)||(36383085-36383137)
chr3 (184-252)||(38498170-38498238)
[»] chr8 (34 HSPs)
chr8 (40-251)||(12106903-12107114)
chr8 (35-185)||(25149372-25149522)
chr8 (33-180)||(21124320-21124467)
chr8 (35-176)||(21184294-21184434)
chr8 (131-251)||(25149274-25149394)
chr8 (131-251)||(35202721-35202842)
chr8 (132-228)||(37543851-37543947)
chr8 (132-247)||(18324121-18324236)
chr8 (132-251)||(21124483-21124602)
chr8 (38-185)||(22426845-22426991)
chr8 (38-185)||(22469566-22469713)
chr8 (40-185)||(37543926-37544071)
chr8 (148-247)||(22326446-22326545)
chr8 (89-182)||(18324046-18324139)
chr8 (38-177)||(23976233-23976370)
chr8 (133-230)||(22469490-22469586)
chr8 (35-180)||(35202593-35202738)
chr8 (40-143)||(12106867-12106970)
chr8 (136-251)||(23976127-23976242)
chr8 (148-251)||(21185802-21185905)
chr8 (131-211)||(31254027-31254107)
chr8 (131-251)||(4288958-4289081)
chr8 (131-180)||(31253995-31254044)
chr8 (39-143)||(25149237-25149341)
chr8 (89-161)||(41358840-41358912)
chr8 (89-168)||(22326557-22326636)
chr8 (184-247)||(37543968-37544031)
chr8 (193-251)||(12107020-12107078)
chr8 (148-230)||(23625110-23625192)
chr8 (127-161)||(29585576-29585610)
chr8 (131-201)||(37494395-37494465)
chr8 (137-230)||(10289327-10289420)
chr8 (127-180)||(21124446-21124499)
chr8 (184-252)||(22426882-22426949)
[»] chr1 (20 HSPs)
chr1 (35-185)||(50335436-50335586)
chr1 (35-185)||(37607968-37608117)
chr1 (60-179)||(13735465-13735584)
chr1 (136-251)||(50335569-50335684)
chr1 (133-230)||(8097772-8097869)
chr1 (131-247)||(37608095-37608210)
chr1 (132-229)||(13735569-13735667)
chr1 (45-178)||(8097856-8097989)
chr1 (184-251)||(50335477-50335544)
chr1 (40-139)||(42847198-42847297)
chr1 (181-251)||(42847191-42847261)
chr1 (34-81)||(11633188-11633235)
chr1 (184-227)||(37608032-37608075)
chr1 (40-143)||(50335617-50335720)
chr1 (41-127)||(37608163-37608249)
chr1 (150-207)||(11633272-11633329)
chr1 (32-81)||(13735414-13735463)
chr1 (182-251)||(32374021-32374090)
chr1 (125-161)||(32374092-32374128)
chr1 (133-185)||(32374100-32374152)
[»] chr6 (21 HSPs)
chr6 (33-177)||(13536553-13536697)
chr6 (35-178)||(10588012-10588155)
chr6 (37-185)||(25089149-25089297)
chr6 (132-251)||(26705152-26705271)
chr6 (127-251)||(21222501-21222625)
chr6 (133-251)||(19295317-19295435)
chr6 (35-185)||(19295415-19295565)
chr6 (133-251)||(25089277-25089395)
chr6 (132-249)||(10862137-10862253)
chr6 (35-185)||(10862008-10862158)
chr6 (147-251)||(13536700-13536804)
chr6 (132-209)||(10672696-10672773)
chr6 (40-185)||(21222599-21222746)
chr6 (40-143)||(19295281-19295384)
chr6 (182-251)||(10587923-10587992)
chr6 (40-143)||(10587887-10587990)
chr6 (89-185)||(10672752-10672847)
chr6 (184-251)||(10588047-10588114)
chr6 (184-250)||(25089189-25089255)
chr6 (40-110)||(25089361-25089431)
chr6 (132-185)||(26705120-26705173)
[»] chr2 (17 HSPs)
chr2 (75-251)||(32092795-32092971)
chr2 (34-185)||(39598641-39598792)
chr2 (132-227)||(39598567-39598662)
chr2 (136-249)||(22092988-22093101)
chr2 (148-251)||(24006916-24007019)
chr2 (98-249)||(17914063-17914214)
chr2 (60-185)||(22092880-22093005)
chr2 (132-230)||(31499408-31499505)
chr2 (75-185)||(31499484-31499594)
chr2 (40-141)||(32092759-32092860)
chr2 (35-179)||(31819910-31820053)
chr2 (127-230)||(31820033-31820136)
chr2 (33-166)||(24007033-24007166)
chr2 (132-171)||(8219263-8219302)
chr2 (184-227)||(39598683-39598726)
chr2 (184-251)||(32092903-32092970)
chr2 (121-185)||(8219220-8219284)
[»] chr5 (33 HSPs)
chr5 (42-185)||(10760141-10760284)
chr5 (33-186)||(13753362-13753515)
chr5 (131-247)||(17497118-17497234)
chr5 (132-250)||(10760045-10760162)
chr5 (127-251)||(19491791-19491915)
chr5 (132-251)||(13753265-13753384)
chr5 (132-251)||(21211453-21211572)
chr5 (127-209)||(34419599-34419681)
chr5 (127-251)||(21943779-21943903)
chr5 (35-179)||(30852581-30852718)
chr5 (127-227)||(2555558-2555658)
chr5 (150-230)||(20429934-20430014)
chr5 (35-179)||(19564795-19564943)
chr5 (39-185)||(21943877-21944023)
chr5 (60-182)||(34419500-34419622)
chr5 (37-185)||(2555436-2555584)
chr5 (133-251)||(30100650-30100765)
chr5 (184-251)||(43548948-43549015)
chr5 (40-110)||(13753229-13753299)
chr5 (135-205)||(30852706-30852776)
chr5 (132-229)||(19564713-19564810)
chr5 (42-143)||(21211419-21211520)
chr5 (43-143)||(17497171-17497271)
chr5 (40-143)||(21943743-21943846)
chr5 (96-178)||(11298015-11298097)
chr5 (133-211)||(11298084-11298162)
chr5 (184-251)||(19564831-19564898)
chr5 (121-178)||(12895609-12895666)
chr5 (88-185)||(30100745-30100842)
chr5 (40-116)||(30100614-30100690)
chr5 (127-229)||(32539326-32539427)
chr5 (97-185)||(17497052-17497140)
chr5 (60-112)||(21211606-21211658)
[»] scaffold0047 (1 HSPs)
scaffold0047 (35-248)||(11601-11811)
[»] scaffold0407 (4 HSPs)
scaffold0407 (127-251)||(872-995)
scaffold0407 (127-251)||(7336-7459)
scaffold0407 (132-185)||(969-1022)
scaffold0407 (132-185)||(7433-7486)
[»] scaffold0102 (2 HSPs)
scaffold0102 (33-185)||(23885-24037)
scaffold0102 (131-247)||(24015-24131)
[»] scaffold0066 (3 HSPs)
scaffold0066 (37-179)||(15362-15504)
scaffold0066 (184-251)||(15401-15468)
scaffold0066 (132-200)||(15489-15557)
[»] scaffold0049 (2 HSPs)
scaffold0049 (137-251)||(59741-59855)
scaffold0049 (46-143)||(59711-59808)
[»] scaffold0003 (2 HSPs)
scaffold0003 (88-185)||(314126-314223)
scaffold0003 (132-207)||(314202-314277)
[»] scaffold1300 (3 HSPs)
scaffold1300 (127-251)||(1469-1593)
scaffold1300 (40-112)||(1357-1429)
scaffold1300 (39-143)||(1526-1630)
[»] scaffold0024 (1 HSPs)
scaffold0024 (127-251)||(127923-128047)
[»] scaffold0018 (1 HSPs)
scaffold0018 (35-229)||(71904-72103)
[»] scaffold0039 (2 HSPs)
scaffold0039 (132-230)||(27546-27644)
scaffold0039 (40-112)||(27683-27755)
[»] scaffold0026 (2 HSPs)
scaffold0026 (127-251)||(57568-57692)
scaffold0026 (89-185)||(57498-57594)
[»] scaffold0011 (2 HSPs)
scaffold0011 (131-247)||(190218-190334)
scaffold0011 (36-180)||(190317-190460)


Alignment Details
Target: chr7 (Bit Score: 173; Significance: 4e-93; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 31 - 251
Target Start/End: Original strand, 36150839 - 36151059
Alignment:
Q  31 tcaagggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactt 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||| |||     
T  36150839 tcaagggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatccatgaatgcagataaattgcaaaataatccctagatgtagactc 36150938  T
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    |||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  36150939 tgttagtcaatttagtctctgaatgtaaactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaggtactgttttgcaatttctc 36151038  T
Q  231 atcattcaaggactaaagtga 251  Q
    | |||||||||| ||||||||    
T  36151039 aacattcaaggattaaagtga 36151059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 35 - 251
Target Start/End: Complemental strand, 43257516 - 43257300
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    ||||||| |||||||| | ||| | ||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||| |  || || ||| ||||    
T  43257516 gggagatcagtcacttcaatccctgaatagaaaatgagtcgtcactttaatccctgaatgcagataaattgcaaaataatccttgaatatagactctgtt 43257417  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatca 234  Q
    |||||||||| ||||| |||||||||| ||||||||| |||| ||| ||||||||||||||||| ||||||||||   ||| |||| ||||||||   ||    
T  43257416 agtcaatttagtccctaaatgtagacttcgttagtcaatttactccctgaaattgaccaacaaaatctacattcagagactcttttacaatttctatgca 43257317  T
Q  235 ttcaaggactaaagtga 251  Q
    |||| ||||||| ||||    
T  43257316 ttcagggactaaggtga 43257300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 39 - 185
Target Start/End: Original strand, 27508576 - 27508721
Alignment:
Q  39 gattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtc 138  Q
    |||||||||||| ||||| | ||||||||||||||| |||||| | || ||||||||||||||||||||||||| |||||  ||||| ||| ||||||||    
T  27508576 gattagtcactt-agtccctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccctgaatgtagactatgttagtc 27508674  T
Q  139 aatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||| |||||||||| |||||| |||||||| |||||||| ||||    
T  27508675 aatttagtccctgaatgcagactctgttagtcaatttagtccctgaa 27508721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 38761276 - 38761126
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    ||||||||| |||||||||||| | ||||||||||||||| |||||| | || ||||||||||||||||||||||||| |||||  ||||| ||||||||    
T  38761276 gggagattaatcactttagtccctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccctgaatgtagactttgtt 38761177  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    | |||||||| |||  ||||| |||||| |||||||| |||||||| ||||    
T  38761176 aatcaatttagtcctcgaatgcagactctgttagtcaatttagtccctgaa 38761126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 27508699 - 27508819
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| |||| |||||||||||| | ||| ||||||||||||||    
T  27508699 tgttagtcaatttagtccctgaatgtagactccgttagtcactttagtccatgaaattgactaacagagtctacattcagggactgttttgcaatttctc 27508798  T
Q  231 atcattcaaggactaaagtga 251  Q
      | |||| ||||||||||||    
T  27508799 tacgttcagggactaaagtga 27508819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 179
Target Start/End: Complemental strand, 6441588 - 6441484
Alignment:
Q  75 gtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctgaatgtagactccgttagtcattt 174  Q
    ||||||| | || |||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| |||||||||| |||||| |||||||| ||    
T  6441588 gtcactttagtctctgaatgcagataaattgcaaaataatccctgaatgtagactttgttagtcaatttagtccctgaatgcagactctgttagtcaatt 6441489  T
Q  175 tagtc 179  Q
    |||||    
T  6441488 tagtc 6441484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 5080264 - 5080145
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctca 231  Q
    |||| |||||||| | |||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||  ||| ||||||| ||||||     
T  5080264 gttaatcaatttagtacctgaatgtagactccgttaatcattttagtccttgaaattgactaacagagtctacattcaaagactgttttgcattttctct 5080165  T
Q  232 tcattcaaggactaaagtga 251  Q
     |||||| | ||||||||||    
T  5080164 gcattcaggaactaaagtga 5080145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 14197614 - 14197495
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctca 231  Q
    ||||||||||||| || || |||||||||||||||||||| |||||||| ||||||||||||||| | ||||||||| |  ||| ||||||||||||||     
T  14197614 gttagtcaatttagtctctcaatgtagactccgttagtcactttagtccctgaaattgaccaacagaatctacattcgatgactgttttgcaatttctct 14197515  T
Q  232 tcattcaaggactaaagtga 251  Q
     |||| | ||||||||||||    
T  14197514 gcatttagggactaaagtga 14197495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 14197690 - 14197599
Alignment:
Q  88 ctgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtc 179  Q
    ||||||||||||||||||||| ||| |||||  ||||| ||| ||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  14197690 ctgaatgcagataaattgcaatatagtccctgaatgtagactctgttagtcaatttaatccctgaatgcagactccgttagtcaatttagtc 14197599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 178
Target Start/End: Complemental strand, 5080393 - 5080250
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    |||| ||||||||||||||||  | |||||||||  |||||| | || | || |||||||||||||||||| |||||| || ||  ||||||||| | ||    
T  5080393 gggaaattagtcactttagtctctgaataggaaagaagtcgttattttagtccctgaatgcagataaattgtaaaatagtctctgaatgtaaactatatt 5080294  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagt 178  Q
    |||||||||| |||||||||| ||||||||||| ||| ||||||    
T  5080293 agtcaatttagtccctgaatgcagactccgttaatcaatttagt 5080250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 15000772 - 15000889
Alignment:
Q  134 tagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatc 233  Q
    ||||||||||| ||||| ||||||||||||||| | || |||||||| ||||||||||||| |||||||||||| | | ||| |||||||||| |||  |    
T  15000772 tagtcaatttagtcccttaatgtagactccgttggacactttagtccctgaaattgaccaataaagtctacatttagggactgttttgcaattcctctgc 15000871  T
Q  234 attcaaggactaaagtga 251  Q
    || ||| |||||||||||    
T  15000872 atccaaagactaaagtga 15000889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 6441500 - 6441381
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    |||||||||||||| || || |||||||||||||||||||| ||| ||||||||||||||| || | |||||||||||| | ||| |||||||||||||     
T  6441500 tgttagtcaatttagtctctaaatgtagactccgttagtcacttttgtccttgaaattgactaa-agagtctacattcagggactgttttgcaatttctt 6441402  T
Q  231 atcattcaaggactaaagtga 251  Q
      |||||| |||||| |||||    
T  6441401 tgcattcagggactatagtga 6441381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 180
Target Start/End: Original strand, 15000641 - 15000786
Alignment:
Q  36 ggagattagtcactttag-tccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    |||||||||||||||||| ||| | ||||||||| || | ||||||| | || ||||||||||||||||||||||||| || |   ||||| | | ||||    
T  15000641 ggagattagtcactttaggtccctgaataggaaaggaattgtcactttagtccctgaatgcagataaattgcaaaatattctcagaatgtagattatgtt 15000740  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagtcc 180  Q
    ||||| |||| ||| |||||| |||||||| |||||| ||||||||    
T  15000741 agtcagtttagtccttgaatgaagactccgatagtcaatttagtcc 15000786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 15272435 - 15272363
Alignment:
Q  175 tagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaa 247  Q
    |||||| |||||||||||||||||||||||||||| | ||||||||||||||||||  |||||| ||||||||    
T  15272435 tagtccctgaaattgaccaacaaagtctacattcagggactattttgcaatttctctgcattcagggactaaa 15272363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 38761148 - 38761029
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    |||||||||||||| |||||||||| |||||| |||||||| ||||||||   ||||||| ||||| |||||||| || || ||| ||||||||||||||    
T  38761148 tgttagtcaatttagtccctgaatgcagactctgttagtcactttagtcccaaaaattgatcaacagagtctaca-tccaggactgttttgcaatttctc 38761050  T
Q  231 atcattcaaggactaaagtga 251  Q
      |||||| | ||||||||||    
T  38761049 tacattcacgaactaaagtga 38761029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 45013003 - 45012928
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacatt 207  Q
    |||||||||||||||| |||||||||||||||| || ||| |||||||| ||||||||||||| | ||||||||||    
T  45013003 gttagtcaatttaatctctgaatgtagactccgctaatcactttagtccctgaaattgaccaatagagtctacatt 45012928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 3404580 - 3404699
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    |||||||||||||| ||||||| |||||  ||| ||||||| ||||||   ||| |||||| |||  |||||||||||||| ||||||||||||||||||    
T  3404580 tgttagtcaatttagtccctgagtgtagt-tccattagtcactttagtttctgatattgactaaccgagtctacattcaaggactattttgcaatttctc 3404678  T
Q  231 atcattcaaggactaaagtga 251  Q
      |||||| || |||||||||    
T  3404679 tgcattcagggcctaaagtga 3404699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 15272326 - 15272426
Alignment:
Q  43 agtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatt 142  Q
    |||||||||||||| | |||  ||||||||| |||| || | || ||||||||||| ||||||||||||| |||||  ||||| |||||||| |||||||    
T  15272326 agtcactttagtccgtgaatgagaaatgagtagtcattttagtccctgaatgcagagaaattgcaaaatagtccctgaatgtagactttgttggtcaatt 15272425  T
Q  143 t 143  Q
    |    
T  15272426 t 15272426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 185
Target Start/End: Complemental strand, 37787952 - 37787821
Alignment:
Q  50 ttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccc 149  Q
    ||||||| | |||| ||||||| ||| ||||| | || |||||||||   ||||||||||||| | |  | ||||| |||||||||||||||||| ||||    
T  37787952 ttagtccctgaataagaaatgaatcgccactttagtccctgaatgca---aaattgcaaaatagttctga-atgtagactttgttagtcaatttagtccc 37787857  T
Q  150 tgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||| | |||| |||||||| ||||||| |||||    
T  37787856 tgaatgcatactctgttagtcaatttagtcgttgaa 37787821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 27508679 - 27508611
Alignment:
Q  184 aaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtgat 252  Q
    |||||||| |||| |||||||||||| | ||||||||||||||| ||  |||||| |||||||||||||    
T  27508679 aaattgactaacatagtctacattcagggactattttgcaatttatctgcattcagggactaaagtgat 27508611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 38761168 - 38761236
Alignment:
Q  184 aaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtgat 252  Q
    |||||||  ||||||||||||||||| | ||||||||||||||| ||  |||||| |||||||||||||    
T  38761168 aaattgattaacaaagtctacattcagggactattttgcaatttatctgcattcagggactaaagtgat 38761236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 45013150 - 45013078
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaata 112  Q
    ||||||||||||||||| | ||||||||| ||||||||| || | ||  |||||||| |||||||||||||||    
T  45013150 attagtcactttagtcccttaataggaaaagagtcgtcagtttagtccttgaatgcaaataaattgcaaaata 45013078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 37787843 - 37787776
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaa 198  Q
    |||||||||||||| ||  ||||||||||||||| ||||||||||| || || |||||||| ||||||    
T  37787843 tgttagtcaatttagtcgttgaatgtagactccgctagtcattttaatctttaaaattgacaaacaaa 37787776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 45013038 - 45012991
Alignment:
Q  129 tttgttagtcaatttaatccctgaatgtagactccgttagtcatttta 176  Q
    |||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  45013038 tttgttagtcaatttagtccctgaatgcagactccgttagtcaattta 45012991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 180
Target Start/End: Original strand, 3404452 - 3404597
Alignment:
Q  34 agggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgt 133  Q
    ||||| ||||||||||||||||| | ||||| |||  | |||||| || | |  || || |||||||||||||||| || ||| |  ||||| ||| |||    
T  3404452 agggacattagtcactttagtccttgaatagaaaagaaatcgtcattttagtacctaaacgcagataaattgcaaagtagtccatgaatgtacactctgt 3404551  T
Q  134 tagtcaatttaatccctgaatgtagactccgttagtcattttagtcc 180  Q
    ||||||||||| ||||| |||| || ||| |||||||| ||||||||    
T  3404552 tagtcaatttagtccctaaatgcag-ctctgttagtcaatttagtcc 3404597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 6441520 - 6441587
Alignment:
Q  184 aaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtga 251  Q
    |||||||| ||||||||||||||||| | | ||||||||||||| ||  ||||||  |||||||||||    
T  6441520 aaattgactaacaaagtctacattcagggattattttgcaatttatctgcattcagagactaaagtga 6441587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 15000925 - 15000822
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtca 139  Q
    ||||| ||||||||||| | ||| |||||||||| ||||||| | ||  || |||||||  |||||||||| | |||||| ||||| ||||| || ||||    
T  15000925 attagccactttagtccctgaatgggaaatgagtagtcactttagtctttggatgcagaggaattgcaaaacagtccctaaatgtagactttattggtca 15000826  T
Q  140 attt 143  Q
    ||||    
T  15000825 attt 15000822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 141
Target Start/End: Complemental strand, 3404735 - 3404634
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtca 139  Q
    ||||||||||||||| | ||||| | ||| |||| ||||||| |  | ||||||||||| ||||||||||||| ||| |  ||||| |||  ||||||||    
T  3404735 attagtcactttagttcctaaatggaaaaagagtagtcactttaggccctgaatgcagagaaattgcaaaatagtccttgaatgtagactcggttagtca 3404636  T
Q  140 at 141  Q
    ||    
T  3404635 at 3404634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 29934551 - 29934474
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaata 112  Q
    ||||||||||| |||||||||| |  ||||||||  ||||||||||| | || || || | |||||||||||||||||    
T  29934551 gggagattagttactttagtccttggataggaaaatagtcgtcactttagtctcttaaggtagataaattgcaaaata 29934474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 33 - 251
Target Start/End: Complemental strand, 22018136 - 22017918
Alignment:
Q  33 aagggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttg 132  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||   || ||||||||||||||||||||||||| |||||  ||||| ||| ||    
T  22018136 aagggagattagtcactttagtccctaaataggaaatgagtcgtcattttcgtctctgaatgcagataaattgcaaaatagtccctgaatgtagactatg 22018037  T
Q  133 ttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcat 232  Q
    |||||| ||||| || ||||||||| ||||||||| ||| |||||||||||||||||||||||| | | |||||||| | ||| ||||||||||||||      
T  22018036 ttagtctatttagtctctgaatgtatactccgttaatcactttagtccttgaaattgaccaacagaatatacattcagggactgttttgcaatttctctg 22017937  T
Q  233 cattcaaggactaaagtga 251  Q
    |||||| ||||||||||||    
T  22017936 cattcagggactaaagtga 22017918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 55382838 - 55382695
Alignment:
Q  37 gagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttag 136  Q
    |||||||||||||||||||| | |||||||||||||||||||||| |||| ||||||||||||||||||||||||| || ||  ||||| ||||||||||    
T  55382838 gagattagtcactttagtccttgaataggaaatgagtcgtcactttaatccctgaatgcagataaattgcaaaatagtctctgaatgtagactttgttag 55382739  T
Q  137 tcaatttaatccctgaatgtagactccgttagtcattttagtcc 180  Q
    |||||||  ||||| |||| ||| ||||||||||| ||||||||    
T  55382738 tcaattttgtccctaaatgcagattccgttagtcaatttagtcc 55382695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 34 - 185
Target Start/End: Complemental strand, 2634309 - 2634158
Alignment:
Q  34 agggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgt 133  Q
    ||||||||||||||||||||||| |||||| |||||||||| |||||| | |||||||||| ||||||||||| ||||| || ||  ||||| ||| |||    
T  2634309 agggagattagtcactttagtccttaaataagaaatgagtcttcactttagtcactgaatgtagataaattgctaaatagtctctgaatgtagactctgt 2634210  T
Q  134 tagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    ||||||||||| |||||||||| |||||| ||| |||| |||||||| ||||    
T  2634209 tagtcaatttagtccctgaatgcagactctgttcgtcaatttagtccctgaa 2634158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 35 - 180
Target Start/End: Complemental strand, 10380879 - 10380734
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    |||||||||||||||||||||| | ||||| |||| |||||| |||| |  | |||||| |||||||||||||||||| || ||| ||||| ||| ||||    
T  10380879 gggagattagtcactttagtccttgaatagaaaataagtcgtaactttagcccctgaattcagataaattgcaaaatagtctctaaatgtagactctgtt 10380780  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagtcc 180  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  10380779 agtcaatttaatccctgaatgcagacttcgttagtcaatttagtcc 10380734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 249
Target Start/End: Complemental strand, 8951271 - 8951058
Alignment:
Q  36 ggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtta 135  Q
    |||||||||| | |||||||||| ||||||||| || ||||||| | | |  ||||||  |||||||| | |||||| | |||  ||||| | |||||||    
T  8951271 ggagattagttaatttagtccatcaataggaaaggaatcgtcacattagttcctgaatatagataaatggtaaaatagttcctgaatgtagattttgtta 8951172  T
Q  136 gtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcat 235  Q
    ||||||||| | ||| |||||||||| ||||||||||||||||   | ||||||||||||  |||||||||||||  ||| |||||||||||||   |||    
T  8951171 gtcaatttagttccttaatgtagacttcgttagtcattttagtttcttaaattgaccaactgagtctacattcaaagactgttttgcaatttctttacat 8951072  T
Q  236 tcaaggactaaagt 249  Q
    ||| ||||||||||    
T  8951071 tcagggactaaagt 8951058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 176
Target Start/End: Complemental strand, 37695213 - 37695075
Alignment:
Q  38 agattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagt 137  Q
    ||||| ||||||||||| ||| || |||||||||||| |||||| | ||  ||||||||||||||||||||||||||| ||  ||||| ||| |||||||    
T  37695213 agattggtcactttagttcatgaaaaggaaatgagtcatcactttagtccttgaatgcagataaattgcaaaataatctctgaatgtagactctgttagt 37695114  T
Q  138 caatttaatccctgaatgtagactccgttagtcatttta 176  Q
    ||||||||||  |||||| |||||| |||||||| ||||    
T  37695113 caatttaatcgttgaatgcagactctgttagtcaattta 37695075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 36 - 185
Target Start/End: Complemental strand, 30471101 - 30470952
Alignment:
Q  36 ggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtta 135  Q
    ||||||||||||||||||||  | ||||| ||| |||||||||||| | |  ||||||| |||||||||| |||||| |||||  ||||| ||| |||||    
T  30471101 ggagattagtcactttagtctctgaatagaaaaagagtcgtcactttagttcctgaatgtagataaattgtaaaatagtccctgaatgtagactatgtta 30471002  T
Q  136 gtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
     |||||||| |||||||||| ||||||||||| ||| ||||||| |||||    
T  30471001 atcaatttagtccctgaatgcagactccgttaatcaatttagtcattgaa 30470952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 127 - 251
Target Start/End: Original strand, 9826751 - 9826875
Alignment:
Q  127 actttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatt 226  Q
    |||| |||| |||||||||||||||||| ||||||| ||||||||  ||| |||||||||||||| |||| ||||||| |||||| ||| ||||||||||    
T  9826751 acttcgttaatcaatttaatccctgaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaagcactgttttgcaatt 9826850  T
Q  227 tctcatcattcaaggactaaagtga 251  Q
    ||||  |||||||| ||| ||||||    
T  9826851 tctctgcattcaagtacttaagtga 9826875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 185
Target Start/End: Original strand, 5448195 - 5448341
Alignment:
Q  39 gattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtc 138  Q
    |||||||| ||||| ||| | ||||||||| ||||| ||| || | || |||||||||||||||||| ||||||  ||||  ||||||||| ||||||||    
T  5448195 gattagtccctttattccctgaataggaaaggagtcatcattttagtccctgaatgcagataaattgtaaaatagcccctgaatgtaaactctgttagtc 5448294  T
Q  139 aatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||| |||||| ||| |||||||||| |||| |||||||| ||||    
T  5448295 aatttagtccctggatgcagactccgttggtcaatttagtccctgaa 5448341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 127 - 227
Target Start/End: Complemental strand, 18830734 - 18830634
Alignment:
Q  127 actttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatt 226  Q
    |||| ||||||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||||||| | |||||||||| | ||| ||| ||||||    
T  18830734 acttcgttagtcaatttagtccctgaatgtagactccattagtcactttagtccctgaaattgaccaacagaatctacattcagggactgtttagcaatt 18830635  T
Q  227 t 227  Q
    |    
T  18830634 t 18830634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 185
Target Start/End: Complemental strand, 47943734 - 47943582
Alignment:
Q  33 aagggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttg 132  Q
    ||||||||||||||  |||||||| | |||||||||||||||||||||| | ||  | |||||||||||||||||||||| |||||  ||||| |||| |    
T  47943734 aagggagattagtcgttttagtccctgaataggaaatgagtcgtcactttagtccttaaatgcagataaattgcaaaatagtccctgaatgtagacttgg 47943635  T
Q  133 ttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||||||||| | | |||||| ||   |||||||||| |||| ||| ||||    
T  47943634 ttagtcaatttagttcttgaatgcaggaaccgttagtcaatttaatccctgaa 47943582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 5324839 - 5324740
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    |||||||||||||| ||| |||||||| |||| ||| |||| |||||||| ||||||||||||||| |||||||||||||  ||| ||||||||||||||    
T  5324839 tgttagtcaatttagtccttgaatgtaaactctgttcgtcactttagtccctgaaattgaccaacagagtctacattcaaagactgttttgcaatttctc 5324740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 251
Target Start/End: Original strand, 5448324 - 5448439
Alignment:
Q  136 gtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcat 235  Q
    ||||||||| ||||||||| |||||| | ||||||| |||||| | ||||||||||||||| ||| |||||||| | ||| ||||||||||||||  |||    
T  5448324 gtcaatttagtccctgaatatagacttcattagtcactttagttcctgaaattgaccaacagagtttacattcagggactgttttgcaatttctctgcat 5448423  T
Q  236 tcaaggactaaagtga 251  Q
    ||| ||||||||||||    
T  5448424 tcagggactaaagtga 5448439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 37695055 - 37694936
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctca 231  Q
    ||||||||||||| ||||||||| |||||||  ||||||| |||||||  | ||||||||||||| | |||||||||| | ||| ||||||||||||||     
T  37695055 gttagtcaatttagtccctgaatatagactctattagtcactttagtcacttaaattgaccaacacaatctacattcagggactgttttgcaatttctct 37694956  T
Q  232 tcattcaaggactaaagtga 251  Q
     |||||| ||||||||||||    
T  37694955 gcattcagggactaaagtga 37694936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 2634180 - 2634074
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    |||| ||||||||| ||||||||||||||||  |||| ||| |||||||  ||||||||||||| |||||||||||||| | ||| ||||||||||||||    
T  2634180 tgttcgtcaatttagtccctgaatgtagactttgttaatcactttagtcgctgaaattgaccaataaagtctacattcagggactgttttgcaatttctc 2634081  T
Q  231 atcattc 237  Q
    | |||||    
T  2634080 agcattc 2634074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 230
Target Start/End: Complemental strand, 47943603 - 47943505
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    ||||||||||||||||||||||||||||||  |||| ||| | |||||| | ||||||||||||||| |||||||||||  ||||||||| ||||||||    
T  47943603 gttagtcaatttaatccctgaatgtagactatgttaatcactatagtccctaaaattgaccaacaaaatctacattcaatgactattttgtaatttctc 47943505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 190
Target Start/End: Original strand, 29908887 - 29909039
Alignment:
Q  38 agattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagt 137  Q
    ||||||||||||||  ||| | |||||||||||||||||||||| | |||||| ||||||||||||||||||||| | | |  ||| | |||  ||||||    
T  29908887 agattagtcactttgatccttgaataggaaatgagtcgtcactttagtcactggatgcagataaattgcaaaatagttcatgaatgcagactccgttagt 29908986  T
Q  138 caatttaatccctgaatgtagactccgttagtcattttagtccttgaaattga 190  Q
    ||||||| ||  |||||||||| ||| ||| ||| |||||| | |||||||||    
T  29908987 caatttagtcgttgaatgtagagtccattattcactttagttcctgaaattga 29909039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 251
Target Start/End: Original strand, 2063270 - 2063389
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctca 231  Q
    ||||||||||||| ||||| |||||||| |  |||||||| ||||||| || ||||||||||||| |||||||||||| | |||  |||||||||||||     
T  2063270 gttagtcaatttagtccctaaatgtagaatttgttagtcactttagtctttaaaattgaccaacagagtctacattcagggactgctttgcaatttctct 2063369  T
Q  232 tcattcaaggactaaagtga 251  Q
     || ||||||| ||||||||    
T  2063370 gcaatcaaggattaaagtga 2063389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 10380755 - 10380676
Alignment:
Q  127 actttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacat 206  Q
    |||| ||||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||||||||||| |||||    
T  10380755 acttcgttagtcaatttagtccctaaatgtagactcagttagtcactttagtccctgaaattgaccaacaaagtttacat 10380676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 10757725 - 10757606
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctca 231  Q
    ||||||||||||| ||||||||||||||||| |||| ||| | || ||| ||| ||||||||||| ||||||||| || | ||| ||||||||||| ||     
T  10757725 gttagtcaatttagtccctgaatgtagactctgttaatcactataatccctgagattgaccaacatagtctacatccatggactgttttgcaatttatct 10757626  T
Q  232 tcattcaaggactaaagtga 251  Q
     |||||| ||||||||||||    
T  10757625 acattcagggactaaagtga 10757606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 10970896 - 10970777
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctca 231  Q
    ||||||||||||| ||||||||||||||||| |||| ||| | || ||| ||| ||||||||||| ||||||||| || | ||| ||||||||||| ||     
T  10970896 gttagtcaatttagtccctgaatgtagactctgttaatcactataatccctgagattgaccaacatagtctacatccatggactgttttgcaatttatct 10970797  T
Q  232 tcattcaaggactaaagtga 251  Q
     |||||| ||||||||||||    
T  10970796 acattcagggactaaagtga 10970777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 18500701 - 18500820
Alignment:
Q  111 taatccctatatgtaaactttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaa 210  Q
    ||||||||  ||||| ||| |||||||||||||| ||||||||| ||||||| |||| ||| |||||||  |||||||||||||||   |||||||||||    
T  18500701 taatccctgaatgtagactctgttagtcaatttagtccctgaatttagactctgttaatcactttagtctctgaaattgaccaacagtatctacattcaa 18500800  T
Q  211 gtactattttgcaatttctc 230  Q
    | ||| |||| |||||||||    
T  18500801 gaactgttttacaatttctc 18500820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 180
Target Start/End: Original strand, 2063144 - 2063286
Alignment:
Q  38 agattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagt 137  Q
    ||||||||||||||||||| | || ||||||||||||| |||||   |   ||||||||||||||||  |||||| ||  |  ||||||||| |||||||    
T  2063144 agattagtcactttagtccctgaagaggaaatgagtcggcactttggttcttgaatgcagataaattataaaatagtcattgaatgtaaactatgttagt 2063243  T
Q  138 caatttaatccctgaatgtagactccgttagtcattttagtcc 180  Q
    ||||||| || ||||||| | ||||||||||||| ||||||||    
T  2063244 caatttagtctctgaatgcaaactccgttagtcaatttagtcc 2063286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 185
Target Start/End: Complemental strand, 18830855 - 18830708
Alignment:
Q  34 agggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgt 133  Q
    ||||||||||||||||||||||  ||    |||||  | ||||||||| | || ||||||||||||||||||||||||| ||| |  ||||| | | |||    
T  18830855 agggagattagtcactttagtctcta----ggaaagaaatcgtcactttagtccctgaatgcagataaattgcaaaatagtccttgaatgtagattctgt 18830760  T
Q  134 tagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    ||||| ||||| |||||||||| ||||| ||||||||| |||||||| ||||    
T  18830759 tagtccatttagtccctgaatgcagacttcgttagtcaatttagtccctgaa 18830708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 11821847 - 11821924
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattca 209  Q
    ||||||||||||| ||  ||||||||||||| |||||||| |||||||| |||||||||||||||||||||| |||||    
T  11821847 gttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaagtctaaattca 11821924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 185
Target Start/End: Original strand, 18500596 - 18500743
Alignment:
Q  37 gagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttag 136  Q
    |||||||||||||||| | | | ||||||||| ||||||||| || | || | |||| || ||| |||| ||||||||   || ||||||||| | ||||    
T  18500596 gagattagtcactttattgcctcaataggaaa-gagtcgtcattttagtctcagaatacaaatagattgaaaaataatttttaaatgtaaactatattag 18500694  T
Q  137 tcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
     ||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  18500695 ccaatttaatccctgaatgtagactctgttagtcaatttagtccctgaa 18500743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 3370013 - 3370104
Alignment:
Q  88 ctgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtc 179  Q
    |||||| |||||||||||||||||| ||  || ||||| ||| |||||||||||||| |||||||||| ||||| ||||||||| |||||||    
T  3370013 ctgaatccagataaattgcaaaatagtcattaaatgtagactctgttagtcaatttagtccctgaatgcagacttcgttagtcaatttagtc 3370104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 12140822 - 12140703
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctca 231  Q
    ||||||||||||| ||| |||||||||| |  ||||||||||||||||| | |||||||  ||||||||||| ||| | | ||| |||||||||||||      
T  12140822 gttagtcaatttagtccttgaatgtagaatttgttagtcattttagtccctaaaattgattaacaaagtctatatttagggactgttttgcaatttcttt 12140723  T
Q  232 tcattcaaggactaaagtga 251  Q
     |||||||||| ||||||||    
T  12140722 gcattcaaggattaaagtga 12140703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 30470973 - 30470854
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctca 231  Q
    |||| |||||||| ||  ||||||||||||| |||||||| |||||||| |||||||||||||||||  ||||||| | | | | ||||||||||||||     
T  30470973 gttaatcaatttagtcattgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaatgctacatttagggagtgttttgcaatttctct 30470874  T
Q  232 tcattcaaggactaaagtga 251  Q
     |||||| | ||||||||||    
T  30470873 gcattcaggaactaaagtga 30470854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 18836523 - 18836423
Alignment:
Q  75 gtcacttaaatcactgaatgcagataaattgcaaaa-taatccctatatgtaaactttgttagtcaatttaatccctgaatgtagactccgttagtcatt 173  Q
    ||||||| | || ||||||||||| ||||||||||| ||||||||  | ||| ||| |||||||| ||||| |||||||||| |||||||||||||||||    
T  18836523 gtcactttagtccctgaatgcagaaaaattgcaaaagtaatccctgaacgtagactctgttagtccatttagtccctgaatgcagactccgttagtcatt 18836424  T
Q  174 t 174  Q
    |    
T  18836423 t 18836423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 251
Target Start/End: Original strand, 3391172 - 3391250
Alignment:
Q  173 tttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtga 251  Q
    ||||||||||||||||||| ||||||||||||||||||  | | ||||||||||||||  ||||||  |||||||||||    
T  3391172 tttagtccttgaaattgactaacaaagtctacattcaatgattgttttgcaatttctctgcattcagagactaaagtga 3391250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 179
Target Start/End: Complemental strand, 1387626 - 1387482
Alignment:
Q  36 ggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtta 135  Q
    |||||||||| |||||||||| | |||||||||  | || ||| || |  | |||||||||||||||||| |||||| |||||  ||||| | ||||||     
T  1387626 ggagattagttactttagtccctgaataggaaagaaatcatcattttaggccctgaatgcagataaattgtaaaatattccctgaatgtagattttgttc 1387527  T
Q  136 gtcaatttaat-ccctgaatgtagactccgttagtcattttagtc 179  Q
     |||||||| | ||||||||| |||||| |||||||| |||||||    
T  1387526 atcaatttagtcccctgaatgcagactctgttagtcaatttagtc 1387482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 47144813 - 47144881
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagt 200  Q
    |||| |||||||| | |||||||| |||||||||| |||| ||||||||||||||||||| ||||||||    
T  47144813 gttaatcaatttagttcctgaatgcagactccgttggtcactttagtccttgaaattgactaacaaagt 47144881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 1387433 - 1387319
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctca 231  Q
    ||||||||||||| | || ||||||||||| ||||||||| |||||||| | | |||||| |||||| | |||||||||| |||  |||| ||||||||     
T  1387433 gttagtcaatttagttccggaatgtagacttcgttagtcactttagtccctaatattgactaacaaa-tatacattcaaggactgctttgtaatttctct 1387335  T
Q  232 tcattcaaggactaaa 247  Q
     |||||| ||||||||    
T  1387334 gcattcatggactaaa 1387319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 12140667 - 12140770
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtca 139  Q
    ||||||||||||| ||| |||||  ||||| ||||||||||| ||||  |||||||| | ||||||||||| | |||||| || || ||||||||| |||    
T  12140667 attagtcactttaatccttaaatgagaaataagtcgtcactttaatccttgaatgcaaagaaattgcaaaacagtccctaaatatagactttgttaatca 12140766  T
Q  140 attt 143  Q
    ||||    
T  12140767 attt 12140770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 47463809 - 47463884
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaa 110  Q
    |||| ||||||||||||||||| |  || |||||||||| ||||||| | || |||||||||||||||||||||||    
T  47463809 gggaaattagtcactttagtccctggatgggaaatgagtagtcactttagtccctgaatgcagataaattgcaaaa 47463884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 11821736 - 11821862
Alignment:
Q  53 gtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctga 152  Q
    |||| |||||||||||  ||||||||||| | ||  | ||| |||||||||||||||||| ||  |  ||||| ||| ||||||| |||||| |||||||    
T  11821736 gtccctaaataggaaagaagtcgtcactttagtccttaaatacagataaattgcaaaatagtctttgaatgtagactctgttagttaatttagtccctga 11821835  T
Q  153 atgtagactccgttagtcattttagtc 179  Q
    ||| ||| | ||||||||| |||||||    
T  11821836 atgcagatttcgttagtcaatttagtc 11821862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 30379017 - 30378948
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaa 109  Q
    ||||||||||||||||  |||||||||||||||| ||||||| | || || |||||||| ||||||||||    
T  30379017 attagtcactttagtctctaaataggaaatgagtagtcactttagtcccttaatgcagagaaattgcaaa 30378948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 247
Target Start/End: Complemental strand, 2232527 - 2232412
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    |||||| ||||||| ||||||||||||||||   ||| ||| |||||||| ||||||||||||||| | |||||||| | | | | ||||||||||||||    
T  2232527 tgttagccaatttagtccctgaatgtagacttt-ttaatcactttagtccctgaaattgaccaacagaatctacattgagggattgttttgcaatttctc 2232429  T
Q  231 atcattcaaggactaaa 247  Q
       ||||| ||||||||    
T  2232428 tctattcagggactaaa 2232412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 18836426 - 18836370
Alignment:
Q  140 atttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaaca 196  Q
    ||||| |||||||||||||||||| ||||||| |||||||| | |||||||||||||    
T  18836426 atttagtccctgaatgtagactccattagtcactttagtccataaaattgaccaaca 18836370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 2063425 - 2063322
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtca 139  Q
    ||||||||||||||||| | ||| |||||||||| ||||||| ||||  ||| |||||| ||||||||||  | |||||  ||||| ||| |||| ||||    
T  2063425 attagtcactttagtccttgaatgggaaatgagtagtcactttaatccttgattgcagagaaattgcaaagcagtccctgaatgtagactctgttggtca 2063326  T
Q  140 attt 143  Q
    ||||    
T  2063325 attt 2063322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 47463933 - 47463850
Alignment:
Q  168 gtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtga 251  Q
    |||| |||||||| ||||||| | ||||| |||||||||||||  ||| ||||||||||| ||  |||||| ||||||||||||    
T  47463933 gtcactttagtccctgaaatttatcaacagagtctacattcaaagactgttttgcaatttatctgcattcagggactaaagtga 47463850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 47943624 - 47943691
Alignment:
Q  184 aaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtga 251  Q
    |||||||| ||| ||||||||||||| | ||||||||||||||| ||  |||| ||||||||||||||    
T  47943624 aaattgactaaccaagtctacattcagggactattttgcaatttatctgcatttaaggactaaagtga 47943691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 55382711 - 55382664
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtc 179  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  55382711 gttagtcaatttagtccctggatgtagactccgttagtcactttagtc 55382664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 10757570 - 10757640
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaa 110  Q
    ||||||||||||||||| | |||  ||||||||| ||||||| | || ||||||| |||||||||||||||    
T  10757570 attagtcactttagtccctgaatgagaaatgagtagtcactttagtccctgaatgtagataaattgcaaaa 10757640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 10970741 - 10970811
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaa 110  Q
    ||||||||||||||||| | |||  ||||||||| ||||||| | || ||||||| |||||||||||||||    
T  10970741 attagtcactttagtccctgaatgagaaatgagtagtcactttagtccctgaatgtagataaattgcaaaa 10970811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 185
Target Start/End: Original strand, 30378738 - 30378887
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    ||||||||| ||||||| |||| | | ||||||| ||||| |||||| | || ||| ||| | ||||||||||||||| || ||  ||| | ||| ||||    
T  30378738 gggagattaatcactttggtcc-tgattaggaaaagagtcatcactttagtccctggatgtaaataaattgcaaaatagtctctgaatgcagactctgtt 30378836  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||||| | || ||||||| |||||| |||||||| || ||||| ||||    
T  30378837 agtcaattcagtctctgaatgcagactctgttagtcaattcagtccctgaa 30378887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 30378865 - 30378981
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    |||||||||||| | ||||||||| |||||||||||||||| ||||||   ||||||||||   |||||||| ||||||   |||  |||||||||||||    
T  30378865 tgttagtcaattcagtccctgaat-tagactccgttagtcactttagtgtctgaaattgac---caaagtctgcattcagagacttctttgcaatttctc 30378960  T
Q  231 atcattcaaggactaaagtga 251  Q
      |||| | ||||||||||||    
T  30378961 tgcattaagggactaaagtga 30378981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 37695088 - 37695034
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||||||||||||||||| |||| |||| |||||||||| |||||||| ||||    
T  37695088 tgttagtcaatttaatccctaaatgcagaccccgttagtcaatttagtccctgaa 37695034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 47463973 - 47463927
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcactt 81  Q
    |||||||||||||||||||| | | ||||||||||||||||||||||    
T  47463973 gggagattagtcactttagttcctgaataggaaatgagtcgtcactt 47463927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 37695108 - 37695176
Alignment:
Q  184 aaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtgat 252  Q
    |||||||| |||| ||||||||||||   | ||||||||||||| ||  ||||||||||||||||||||    
T  37695108 aaattgactaacagagtctacattcagagattattttgcaatttatctgcattcaaggactaaagtgat 37695176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 5448475 - 5448372
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtca 139  Q
    ||||||||||||| ||| | ||| | ||| || | ||||||| | || ||||||||||| ||||||||||| | |||||  ||||||||| |||| ||||    
T  5448475 attagtcactttactccgtgaatcgaaaaagaatagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtaaactctgttggtca 5448376  T
Q  140 attt 143  Q
    ||||    
T  5448375 attt 5448372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 185
Target Start/End: Complemental strand, 12140836 - 12140801
Alignment:
Q  150 tgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||||||||||||||||||| |||||||||||||    
T  12140836 tgaatgtagactccgttagtcaatttagtccttgaa 12140801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 18830766 - 18830817
Alignment:
Q  200 tctacattcaagtactattttgcaatttctcatcattcaaggactaaagtga 251  Q
    |||||||||||| ||||||||||||||| ||  |||||| ||||||||||||    
T  18830766 tctacattcaaggactattttgcaatttatctgcattcagggactaaagtga 18830817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 47144920 - 47144865
Alignment:
Q  88 ctgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaattt 143  Q
    ||||||||| ||||||||||||| | || ||| || ||||||||||||||||||||    
T  47144920 ctgaatgcaaataaattgcaaaacagtctctaaatataaactttgttagtcaattt 47144865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 55382732 - 55382799
Alignment:
Q  184 aaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtga 251  Q
    |||||||| |||||||||||||||||   ||||||||||||||| ||  |||||| ||| ||||||||    
T  55382732 aaattgactaacaaagtctacattcagagactattttgcaatttatctgcattcagggattaaagtga 55382799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 147
Target Start/End: Original strand, 55604370 - 55604456
Alignment:
Q  60 aataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatc 147  Q
    ||||||||||||||||| |||| ||||  | || | |||||||||||||| |||| |||| || |||||||| ||| |||||||||||    
T  55604370 aataggaaatgagtcgttactttaatccat-aacgtagataaattgcaaagtaattcctaaatataaacttttttaatcaatttaatc 55604456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 5324871 - 5324817
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||||||||||| | | |||||| |||||| |||||||| |||||||||||||    
T  5324871 tgttagtcaatttagttcatgaatgcagactctgttagtcaatttagtccttgaa 5324817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 10757750 - 10757704
Alignment:
Q  139 aatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||| |||||||||| ||||||||||||||| |||||||| ||||    
T  10757750 aatttagtccctgaatgcagactccgttagtcaatttagtccctgaa 10757704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 10970921 - 10970875
Alignment:
Q  139 aatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||| |||||||||| ||||||||||||||| |||||||| ||||    
T  10970921 aatttagtccctgaatgcagactccgttagtcaatttagtccctgaa 10970875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 185
Target Start/End: Complemental strand, 2232629 - 2232505
Alignment:
Q  60 aataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctgaatgtaga 159  Q
    |||| |||| || ||||||||| | || || |||| | |||||||| |||||| ||| |  ||||| ||| |||||||||||||||||||||  || |||    
T  2232629 aataagaaaggaatcgtcactttagtccctaaatgtaaataaattgtaaaatagtccttcaatgtagactatgttagtcaatttaatccctggttg-aga 2232531  T
Q  160 ctccgttagtcattttagtccttgaa 185  Q
    ||| ||||| || |||||||| ||||    
T  2232530 ctctgttagccaatttagtccctgaa 2232505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 185
Target Start/End: Original strand, 9826632 - 9826777
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtca 139  Q
    |||||||||||| |||| | |||||||||  | |  |||||| | ||  |||||||||||||||||||||||| |  ||  ||||| ||| |||||||||    
T  9826632 attagtcactttggtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgcaaaatagtttctgaatgtatactatgttagtca 9826731  T
Q  140 atttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    | ||| |  ||||||| ||||| ||||| ||| |||| ||| ||||    
T  9826732 acttagtatctgaatgcagacttcgttaatcaatttaatccctgaa 9826777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 47144765 - 47144802
Alignment:
Q  148 cctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  47144765 cctgaatgtagactcagttagtcaatttagtccttgaa 47144802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 3391251 - 3391183
Alignment:
Q  75 gtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaattt 143  Q
    ||||||| | || ||||||||||| ||||||||||| ||||  |  ||||| |||||||||||||||||    
T  3391251 gtcactttagtctctgaatgcagagaaattgcaaaacaatcattgaatgtagactttgttagtcaattt 3391183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 11822011 - 11821931
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatc 115  Q
    |||| |||||| |||||||||| | ||| ||||||||||  | |||| | || ||||||||||| ||||||||||| ||||    
T  11822011 gggaaattagttactttagtccttcaatgggaaatgagtacttactttagtccctgaatgcagagaaattgcaaaacaatc 11821931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 22017885 - 22017985
Alignment:
Q  43 agtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatt 142  Q
    |||||||||| ||| | ||| ||||| |||| ||||||| | || ||||||||||| ||||||||||| | |||||  ||||| | | |||| |||||||    
T  22017885 agtcactttaatccctgaatgggaaaggagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtatattctgttggtcaatt 22017984  T
Q  143 t 143  Q
    |    
T  22017985 t 22017985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 1e-49; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 40 - 251
Target Start/End: Complemental strand, 26498795 - 26498584
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtca 139  Q
    ||||||||||||||||  | ||||||||||||||| |||||| | || ||||||||||||||||||||||||| ||| |  ||||| |||  ||||||||    
T  26498795 attagtcactttagtctctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccatgaatgtagactcggttagtca 26498696  T
Q  140 atttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaa 239  Q
    ||||| || ||||||| | ||||||||||||| |||||||| |||||||||||||||  ||||||||||| | ||| ||||||||||||||  ||||||     
T  26498695 atttagtcactgaatgcatactccgttagtcactttagtccctgaaattgaccaacatggtctacattcagggactgttttgcaatttctctgcattcag 26498596  T
Q  240 ggactaaagtga 251  Q
    ||||||||||||    
T  26498595 ggactaaagtga 26498584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 38 - 251
Target Start/End: Original strand, 38498133 - 38498346
Alignment:
Q  38 agattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagt 137  Q
    |||||||||| |||||||  | ||||| ||||||||  |||||| | || ||||||||||||||||||||||||| ||| || || ||||||||||||||    
T  38498133 agattagtcagtttagtctctgaatagaaaatgagtgatcactttagtccctgaatgcagataaattgcaaaatagtccataaatataaactttgttagt 38498232  T
Q  138 caatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattc 237  Q
    ||||||| |||||||||||||||||  ||||||| |||||||| | ||||| || |||||||||||||||||   |||||||||||||||||   |||||    
T  38498233 caatttagtccctgaatgtagactctattagtcactttagtccctaaaattaactaacaaagtctacattcagagactattttgcaatttctatgcattc 38498332  T
Q  238 aaggactaaagtga 251  Q
    | ||||||||||||    
T  38498333 agggactaaagtga 38498346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 35 - 185
Target Start/End: Original strand, 48755322 - 48755472
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||| | || |||||||||||||| |||||||||| |||||  ||||| ||| ||||    
T  48755322 gggagattagtcactttagtccctgaataggaaaggagtcgtcactttagtctctgaatgcagataagttgcaaaatagtccctgaatgtagactctgtt 48755421  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||||||| |||||||||| ||||||||||||||| |||||||| ||||    
T  48755422 agtcaatttagtccctgaatgcagactccgttagtcaatttagtccatgaa 48755472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 35 - 247
Target Start/End: Original strand, 20758954 - 20759166
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    ||||||||| |||||||| ||  | |||| ||||| ||||||||||| | ||  ||||| ||||||||||| |||||| || ||  || || ||| | ||    
T  20758954 gggagattaatcactttaatctctgaatatgaaataagtcgtcactttagtccttgaatacagataaattgtaaaatagtctctgaatatagactctatt 20759053  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatca 234  Q
    |||||||||| |||||||   ||||||  |||||||| |||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||  ||    
T  20759054 agtcaatttagtccctgagaatagactatgttagtcactttagtccctgaaattgactaacaaagtctacattcaaggactattttgcaatttctctgca 20759153  T
Q  235 ttcaaggactaaa 247  Q
    |||||||||||||    
T  20759154 ttcaaggactaaa 20759166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 34 - 180
Target Start/End: Original strand, 1426478 - 1426624
Alignment:
Q  34 agggagattagtcactttagtccataaataggaaatgagtcgtcacttaa-atcactgaatgcagataaattgcaaaataatccctatatgtaaactttg 132  Q
    ||||||||||||||||||||||  | |||||||||||||||||||||| | ||| ||||||||||||||||||||||||| | |||  ||||| | | ||    
T  1426478 agggagattagtcactttagtctctgaataggaaatgagtcgtcactttagatc-ctgaatgcagataaattgcaaaatagttcctgaatgtagattatg 1426576  T
Q  133 ttagtcaatttaatccctgaatgtagactccgttagtcattttagtcc 180  Q
    |||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  1426577 ttagtcaatttagtccctgaatgcagactccgttagtcaatttagtcc 1426624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 35 - 179
Target Start/End: Original strand, 15031183 - 15031327
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    |||||||||| ||||||||||| | ||| ||||| |||||||||||| | ||  ||||||||||||||||| |||||| |||||  ||||| ||| ||||    
T  15031183 gggagattagccactttagtccttgaatgggaaaagagtcgtcactttagtccttgaatgcagataaattgtaaaatagtccctgaatgtagactctgtt 15031282  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagtc 179  Q
    |||||||||| |||||||||| | ||||||||||||| |||||||    
T  15031283 agtcaatttagtccctgaatgcaaactccgttagtcaatttagtc 15031327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 251
Target Start/End: Original strand, 15031344 - 15031463
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctca 231  Q
    ||||||||||||| || ||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| | | ||| ||||||||||||||     
T  15031344 gttagtcaatttagtcactgaatgtagactccgttagtcactttagtccctgaaattgaccaacaaagtctagatttagggactgttttgcaatttctct 15031443  T
Q  232 tcattcaaggactaaagtga 251  Q
     ||||||  |||||||||||    
T  15031444 gcattcagagactaaagtga 15031463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 185
Target Start/End: Original strand, 33343001 - 33343150
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    |||||||||||||||||||||| | ||||| |||||||||||||||| | || ||||||||||||||||||| ||||  |||||  ||||| ||| ||||    
T  33343001 gggagattagtcactttagtccctgaatagaaaatgagtcgtcactttagtccctgaatgcagataaattgctaaatggtccctgaatgtagactatgtt 33343100  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||| ||| |||||||||| | |||  |||||||| |||||||| ||||    
T  33343101 agtcaa-ttagtccctgaatgcaaactatgttagtcaatttagtccctgaa 33343150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 14434793 - 14434676
Alignment:
Q  134 tagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatc 233  Q
    |||| |||||| || |||||||||||||||| |||||| |||||||| ||||||| || ||||||||||||||||||| ||| ||||||||| ||||  |    
T  14434793 tagttaatttagtctctgaatgtagactccgctagtcactttagtccctgaaattaactaacaaagtctacattcaaggactgttttgcaatatctctgc 14434694  T
Q  234 attcaaggactaaagtga 251  Q
    ||| | ||||||||||||    
T  14434693 atttacggactaaagtga 14434676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 127 - 251
Target Start/End: Complemental strand, 18445565 - 18445441
Alignment:
Q  127 actttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatt 226  Q
    |||| |||| ||||||||||||| |||| ||||||| ||||||||  ||| |||||||||||||| |||| ||||||| |||||| ||| ||||||||||    
T  18445565 acttcgttaatcaatttaatcccagaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaagcactgttttgcaatt 18445466  T
Q  227 tctcatcattcaaggactaaagtga 251  Q
    ||||  |||||||| ||| ||||||    
T  18445465 tctctgcattcaagtacttaagtga 18445441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 36 - 144
Target Start/End: Original strand, 42453039 - 42453147
Alignment:
Q  36 ggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtta 135  Q
    ||||||||||||||||| ||| | ||||| |||||||||||||||| | ||  |||||||| ||||||||||||||| |||||| ||||| ||| |||||    
T  42453039 ggagattagtcactttaatccttgaatagaaaatgagtcgtcactttagtctatgaatgcaaataaattgcaaaatagtccctaaatgtagactctgtta 42453138  T
Q  136 gtcaattta 144  Q
    |||||||||    
T  42453139 gtcaattta 42453147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 185
Target Start/End: Original strand, 21514740 - 21514889
Alignment:
Q  36 ggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtta 135  Q
    ||||||||||||||||||||  | ||||  |||  ||||||||||| | || |||||| ||||||||||| |||||| ||| |  ||||| ||| |||||    
T  21514740 ggagattagtcactttagtctttgaatataaaagaagtcgtcactttagtccctgaatacagataaattgtaaaatagtccttgaatgtagactctgtta 21514839  T
Q  136 gtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    || |||||| ||||||||||  |||| ||||||||| |||||||||||||    
T  21514840 gttaatttagtccctgaatgcggacttcgttagtcaatttagtccttgaa 21514889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 249
Target Start/End: Original strand, 26920268 - 26920396
Alignment:
Q  121 atgtaaactttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactatttt 220  Q
    ||||| |||| ||||||||||||| ||| | ||||||| |||| ||||||| |||| ||| ||||||||| ||||||||| |||||||||| ||| ||||    
T  26920268 atgtatacttcgttagtcaatttagtccttaaatgtaggctccattagtcactttaatccctgaaattgatcaacaaagtatacattcaagaactgtttt 26920367  T
Q  221 gcaatttctcatcattcaaggactaaagt 249  Q
    ||||||| ||  ||||||  |||||||||    
T  26920368 gcaatttttctgcattcatagactaaagt 26920396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 251
Target Start/End: Original strand, 48755451 - 48755571
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactcc-gttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    ||||||||||||| ||| |||||||||||||  |||||||| |||   || ||||||||||||||| |||||||||||| | ||| ||||||||||||||    
T  48755451 gttagtcaatttagtccatgaatgtagactcgtgttagtcactttgacccctgaaattgaccaacagagtctacattcaggaactgttttgcaatttctc 48755550  T
Q  231 atcattcaaggactaaagtga 251  Q
      |||||| ||||||||||||    
T  48755551 tgcattcagggactaaagtga 48755571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 11989200 - 11989081
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctca 231  Q
    |||| |||||||| ||| | ||||||||||||||||| || |||||||  ||||||||||||||| |||||| ||||| | ||| ||||||||||||||     
T  11989200 gttaatcaatttagtccttaaatgtagactccgttagccactttagtctctgaaattgaccaacagagtctatattcagggactgttttgcaatttctct 11989101  T
Q  232 tcattcaaggactaaagtga 251  Q
     ||||||  |||||||||||    
T  11989100 gcattcagagactaaagtga 11989081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 251
Target Start/End: Original strand, 44967980 - 44968097
Alignment:
Q  133 ttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcat 232  Q
    |||||||||||| ||  |||||||||||||  ||||||| |||| ||| |||||||||||||||||||||||||| | | ||| ||||||||||| ||      
T  44967980 ttagtcaatttagtctttgaatgtagactctcttagtcactttaatccctgaaattgaccaacaaagtctacatttagggactgttttgcaatttatcta 44968079  T
Q  233 cattcaaggactaaagtga 251  Q
    ||||| |||||||||||||    
T  44968080 cattc-aggactaaagtga 44968097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 230
Target Start/End: Original strand, 33343122 - 33343226
Alignment:
Q  125 aaactttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaa 224  Q
    ||||| |||||||||||||| ||||||||||||||||  |||| ||| |||||| | ||||||||||||||| ||| || ||||||| ||| ||||||||    
T  33343122 aaactatgttagtcaatttagtccctgaatgtagactttgttaatca-tttagttcctgaaattgaccaacagagtttatattcaaggactgttttgcaa 33343220  T
Q  225 tttctc 230  Q
    ||||||    
T  33343221 tttctc 33343226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 39541667 - 39541752
Alignment:
Q  33 aagggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccct 118  Q
    |||||||||||||| ||||||||  | |||||||||||||||||||||| | || |||||||||||||||||||||| || |||||    
T  39541667 aagggagattagtcgctttagtcactgaataggaaatgagtcgtcactttagtctctgaatgcagataaattgcaaagtagtccct 39541752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 41985046 - 41984941
Alignment:
Q  146 tccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggacta 245  Q
    ||||||||| ||||||| ||||||||  ||| |||||||||||||| |||| ||||||| |||||| ||| ||||||||||||||  |||||||| |||     
T  41985046 tccctgaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaagtactt 41984947  T
Q  246 aagtga 251  Q
    ||||||    
T  41984946 aagtga 41984941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 247
Target Start/End: Original strand, 21514863 - 21514983
Alignment:
Q  127 actttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatt 226  Q
    |||| ||||||||||||| ||| ||||||| ||||| |||||| | |||| ||| ||||||||||||| | |||||||||||| | ||| ||||| ||||    
T  21514863 acttcgttagtcaatttagtccttgaatgtggactctgttagttactttaatccatgaaattgaccaatatagtctacattcagggactgttttgaaatt 21514962  T
Q  227 tctcatcattcaaggactaaa 247  Q
    | ||  |||||||||||||||    
T  21514963 tatctacattcaaggactaaa 21514983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 185
Target Start/End: Complemental strand, 43562886 - 43562734
Alignment:
Q  33 aagggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttg 132  Q
    ||||||||||||||| |||||||| | |||||||||||| |||||| || | |  |||||||||||||||||| |||||| ||| |  ||||| | | ||    
T  43562886 aagggagattagtcattttagtccctcaataggaaatgattcgtcattttagtttctgaatgcagataaattgtaaaatagtccttgaatgtagattctg 43562787  T
Q  133 ttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    || ||||||||||||  |||||| ||||| | ||||||| |||| ||| ||||    
T  43562786 tttgtcaatttaatcgttgaatgcagacttcattagtcaatttaatccctgaa 43562734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 15031499 - 15031396
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtca 139  Q
    ||||||||||||||||| | ||| |||||||||| ||||||| | || ||||||||||| ||||||||||| | |||||| || || |||||||| ||||    
T  15031499 attagtcactttagtccctgaatgggaaatgagtagtcactttagtctctgaatgcagagaaattgcaaaacagtccctaaatctagactttgttggtca 15031400  T
Q  140 attt 143  Q
    ||||    
T  15031399 attt 15031396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 7300207 - 7300142
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaaca 196  Q
    |||||||||||||||||||| |||| |||||| |||||||| ||||||||||||| ||||||||||    
T  7300207 tgttagtcaatttaatccctaaatgcagactctgttagtcactttagtccttgaatttgaccaaca 7300142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 11989293 - 11989182
Alignment:
Q  71 agtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctgaatgtagactccgttagtc 170  Q
    |||||||| || | || ||| ||| ||||||||||||||||| || |||  |||| ||| ||||||||||| || |||||||||| ||||||||||| ||    
T  11989293 agtcgtcattttagtctctgcatgtagataaattgcaaaatagtctctagttgtagactctgttagtcaatctagtccctgaatgcagactccgttaatc 11989194  T
Q  171 attttagtcctt 182  Q
    | ||||||||||    
T  11989193 aatttagtcctt 11989182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 33412199 - 33412276
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaata 112  Q
    |||||||||||||||||||||  | |||||||||||| ||||||||| ||||   |||||||||||||||| ||||||    
T  33412199 gggagattagtcactttagtctttgaataggaaatgaatcgtcactttaatcttcgaatgcagataaattgtaaaata 33412276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 39541748 - 39541853
Alignment:
Q  146 tccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggacta 245  Q
    ||||||||| |||| |  |||||||| ||| |||||| ||||||||||||| ||||||||||||   ||| |||| |||||||||  |||||| ||||||    
T  39541748 tccctgaatatagattatgttagtcacttttgtccttaaaattgaccaacagagtctacattcagagactgttttacaatttctctgcattcagggacta 39541847  T
Q  246 aagtga 251  Q
    ||||||    
T  39541848 aagtga 39541853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 15005039 - 15005103
Alignment:
Q  121 atgtaaactttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    ||||| ||| ||||||||||||||||||||||||| |||||| |||||| | |||||||||||||    
T  15005039 atgtagactctgttagtcaatttaatccctgaatgcagactcagttagttaatttagtccttgaa 15005103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 1426608 - 1426714
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctca 231  Q
    ||||||||||||| ||||| |||||||||||||||||||| |         |||||||||||||||||||||||||||   ||| ||||||||||||||     
T  1426608 gttagtcaatttagtccctaaatgtagactccgttagtcact---------gaaattgaccaacaaagtctacattcagtgactgttttgcaatttctct 1426698  T
Q  232 tcattcaaggactaaa 247  Q
     |||||| ||| ||||    
T  1426699 gcattcagggattaaa 1426714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 251
Target Start/End: Original strand, 15005082 - 15005201
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctca 231  Q
    |||||| |||||| ||| |||||||| |||  |||||||| || | ||| ||||||||||| ||| ||||||||||||   ||| ||||||||||||||     
T  15005082 gttagttaatttagtccttgaatgtatactttgttagtcacttaaatccctgaaattgaccgacagagtctacattcagaaactgttttgcaatttctct 15005181  T
Q  232 tcattcaaggactaaagtga 251  Q
     ||||||  |||||||||||    
T  15005182 gcattcagagactaaagtga 15005201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 185
Target Start/End: Original strand, 44967849 - 44968000
Alignment:
Q  34 agggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgt 133  Q
    ||||||||  ||||||||||||| | ||||| |||||||| ||||||| | || ||||||||| ||| ||||||||||| |   |  ||||| ||| |||    
T  44967849 agggagataggtcactttagtcctttaatagaaaatgagttgtcactttagtccctgaatgcaaatatattgcaaaatagtttttgaatgtagactctgt 44967948  T
Q  134 tagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    ||||||||||| || || |||  |||| || ||||||| ||||||| |||||    
T  44967949 tagtcaatttagtctctcaatacagaccccattagtcaatttagtctttgaa 44968000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 15031291 - 15031224
Alignment:
Q  184 aaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtga 251  Q
    |||||||| |||| |||||||||||| | |||||||| |||||| ||  |||||||||||||||||||    
T  15031291 aaattgactaacagagtctacattcagggactattttacaatttatctgcattcaaggactaaagtga 15031224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 15031312 - 15031359
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtc 179  Q
    ||||||||||||| || ||||||||||||||||||||||| |||||||    
T  15031312 gttagtcaatttagtcactgaatgtagactccgttagtcaatttagtc 15031359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 26498548 - 26498651
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtca 139  Q
    ||||||||||||||||| | ||| ||||| |||| ||||||| | || ||||||||||| ||||||||||| | |||||  ||||| ||  |||| ||||    
T  26498548 attagtcactttagtccctgaatgggaaaagagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagaccatgttggtca 26498647  T
Q  140 attt 143  Q
    ||||    
T  26498648 attt 26498651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 43562754 - 43562708
Alignment:
Q  133 ttagtcaatttaatccctgaatgtagactccgttagtcattttagtc 179  Q
    ||||||||||||||||||||||||||||  ||||||||| |||||||    
T  43562754 ttagtcaatttaatccctgaatgtagacatcgttagtcactttagtc 43562708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 26498692 - 26498760
Alignment:
Q  184 aaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtgat 252  Q
    |||||||| |||  |||||||||||| | ||||||||||||||| ||  |||||| |||||||||||||    
T  26498692 aaattgactaaccgagtctacattcatggactattttgcaatttatctgcattcagggactaaagtgat 26498760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 38498382 - 38498279
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtca 139  Q
    ||||||||||||| ||| | |||  |||| |||| ||||||| | || ||||||||| | ||||||||||||| || ||  ||||| ||||||||||| |    
T  38498382 attagtcactttaatccctgaatgagaaaggagtagtcactttagtccctgaatgcatagaaattgcaaaatagtctctgaatgtagactttgttagtta 38498283  T
Q  140 attt 143  Q
    ||||    
T  38498282 attt 38498279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 44968086 - 44968031
Alignment:
Q  88 ctgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaattt 143  Q
    ||||||| ||||||||||||||| | |||||| ||||| |||||||| ||||||||    
T  44968086 ctgaatgtagataaattgcaaaacagtccctaaatgtagactttgttggtcaattt 44968031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 20759157 - 20759103
Alignment:
Q  89 tgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaattt 143  Q
    |||||||||| ||||||||||||| ||| |  ||||| |||||||||||||||||    
T  20759157 tgaatgcagagaaattgcaaaatagtccttgaatgtagactttgttagtcaattt 20759103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 182
Target Start/End: Original strand, 26920152 - 26920297
Alignment:
Q  36 ggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtta 135  Q
    |||||||| |||||||||||| ||| ||| ||||||||  | |||| | ||  |||||  | ||||||||||||||| || ||| || || ||| | |||    
T  26920152 ggagattaatcactttagtccttaa-tagcaaatgagttataactttagtccatgaatctaaataaattgcaaaatagtctctaaatatagactctatta 26920250  T
Q  136 gtcaatttaatccctgaatgtagactccgttagtcattttagtcctt 182  Q
    || |||||| | ||| |||||| ||| ||||||||| ||||||||||    
T  26920251 gttaatttagttcctcaatgtatacttcgttagtcaatttagtcctt 26920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 36383085 - 36383137
Alignment:
Q  127 actttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtc 179  Q
    |||||||||||||||||||||| |||||| |||||  ||| |||| |||||||    
T  36383085 actttgttagtcaatttaatccttgaatgcagactttgttggtcaatttagtc 36383137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 38498238 - 38498170
Alignment:
Q  184 aaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtgat 252  Q
    |||||||| |||||||| || ||| | | ||||||||||||||| ||  |||||| |||||||||||||    
T  38498238 aaattgactaacaaagtttatatttatggactattttgcaatttatctgcattcagggactaaagtgat 38498170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 4e-47; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 40 - 251
Target Start/End: Complemental strand, 12107114 - 12106903
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtca 139  Q
    ||||||||||||||||  |||||||||||  ||||||||||| | ||  ||||||||||||||||||||||||||||||  ||||| ||| ||||| | |    
T  12107114 attagtcactttagtctctaaataggaaagaagtcgtcactttagtccttgaatgcagataaattgcaaaataatccctgaatgtagactctgttaatta 12107015  T
Q  140 atttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaa 239  Q
    | ||| ||||| |||||||||| |||| |||| |||||||| ||||||||||||||| ||||||||| || | ||| ||||||||||||||  ||||||     
T  12107014 aattagtccctaaatgtagactgcgttcgtcactttagtccctgaaattgaccaacagagtctacatccagggactgttttgcaatttctctgcattcag 12106915  T
Q  240 ggactaaagtga 251  Q
    ||||||||||||    
T  12106914 ggactaaagtga 12106903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 25149522 - 25149372
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    |||||||||||||||||||||| | |||||||||||||||||||||  | || ||||||||||||||| |||||||||||| ||  ||||| ||||||||    
T  25149522 gggagattagtcactttagtccctgaataggaaatgagtcgtcactatagtctctgaatgcagataaactgcaaaataatctctgaatgtagactttgtt 25149423  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||||||| || ||||||| |||||| ||||||||  ||||||| ||||    
T  25149422 agtcaatttagtctctgaatgcagactctgttagtcaagttagtccctgaa 25149372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 180
Target Start/End: Original strand, 21124320 - 21124467
Alignment:
Q  33 aagggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttg 132  Q
    |||||||||||| | ||||||||| | ||||||||| ||| |||||||| | || |||||| |||||||||||||||||| || ||| ||||| ||| |     
T  21124320 aagggagattagccgctttagtccctgaataggaaaggagacgtcactttagtctctgaatacagataaattgcaaaatagtctctaaatgtagactcta 21124419  T
Q  133 ttagtcaatttaatccctgaatgtagactccgttagtcattttagtcc 180  Q
    |||||||||||| |||||||||| ||||| ||||||||| ||||||||    
T  21124420 ttagtcaatttagtccctgaatgcagacttcgttagtcaatttagtcc 21124467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 176
Target Start/End: Original strand, 21184294 - 21184434
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    |||| ||||||||||||||||| | |||||||||||||||||||||  | || | ||||||||||||||||||||||| |||||  || ||||| || ||    
T  21184294 gggaaattagtcactttagtccctgaataggaaatgagtcgtcactctagtccccgaatgcagataaattgcaaaatagtccctgaatataaac-ttatt 21184392  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcatttta 176  Q
    |||||||||| |||||||||  ||||||||||| ||| ||||    
T  21184393 agtcaatttagtccctgaatacagactccgttaatcaattta 21184434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 25149394 - 25149274
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    |||||||||| ||| |||||||| |||||| ||||| |||| |||||||||||||||||||||||| |||||||||||| | ||| |||||||||||||     
T  25149394 tgttagtcaagttagtccctgaacgtagacaccgttcgtcactttagtccttgaaattgaccaacagagtctacattcagggactgttttgcaatttctt 25149295  T
Q  231 atcattcaaggactaaagtga 251  Q
      |||||| ||| ||||||||    
T  25149294 tgcattcagggattaaagtga 25149274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 35202721 - 35202842
Alignment:
Q  131 tgttagtcaatttaatccc-tgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttct 229  Q
    |||||||||||||| |||| |||||||||||||||||||||| |||||| | ||||||||||||||| |||  ||||||| | ||| |||||||||||||    
T  35202721 tgttagtcaatttagtcccctgaatgtagactccgttagtcactttagttcctgaaattgaccaacagagtaaacattcagggactgttttgcaatttct 35202820  T
Q  230 catcattcaaggactaaagtga 251  Q
    |  |||||| | ||||||||||    
T  35202821 ctgcattcaggaactaaagtga 35202842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 37543947 - 37543851
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttc 228  Q
    |||||| |||||| ||||||||| |||||||||||| ||| |||||||| ||||||||||||| ||||| |||||||| | ||||||||||||||||    
T  37543947 gttagttaatttagtccctgaatatagactccgttaatcactttagtccatgaaattgaccaataaagtttacattcatgaactattttgcaatttc 37543851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 18324121 - 18324236
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctca 231  Q
    ||||||||||||| ||| | |||||||||||||||||||| |||||| | |||||||||||| || |||| ||||||| | ||| ||||||||||||||     
T  18324121 gttagtcaatttagtccttaaatgtagactccgttagtcactttagttcatgaaattgaccagcagagtcgacattcatggactgttttgcaatttctct 18324220  T
Q  232 tcattcaaggactaaa 247  Q
     |||||| ||||||||    
T  18324221 gcattcagggactaaa 18324236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 251
Target Start/End: Original strand, 21124483 - 21124602
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctca 231  Q
    ||||||||||||| ||||  | ||||||||||||||| || |||||||| | ||||||||||||| |||||||||||||| ||| ||||||||||||||     
T  21124483 gttagtcaatttagtcccctagtgtagactccgttagccactttagtccataaaattgaccaacagagtctacattcaaggactgttttgcaatttctct 21124582  T
Q  232 tcattcaaggactaaagtga 251  Q
     |||||| | | ||||||||    
T  21124583 acattcaggaattaaagtga 21124602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 185
Target Start/End: Original strand, 22426845 - 22426991
Alignment:
Q  38 agattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagt 137  Q
    ||||||||||||||||||| | ||||||||| ||||| |||||| | ||  ||||||| |||||||||||||||| |||||  |||||  || |||||||    
T  22426845 agattagtcactttagtccctgaataggaaacgagtcatcactttagtccatgaatgc-gataaattgcaaaatagtccctgaatgtagtctctgttagt 22426943  T
Q  138 caatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    ||||||| ||||||||||||| |||  ||||||| ||| |||| ||||    
T  22426944 caatttagtccctgaatgtagtctcttttagtcaatttggtccctgaa 22426991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 185
Target Start/End: Complemental strand, 22469713 - 22469566
Alignment:
Q  38 agattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagt 137  Q
    |||||||||||||||||| || |||| ||||||||||||||||| | ||  | ||||||||||||||| |||||| | ||   ||||| | | |||||||    
T  22469713 agattagtcactttagtctatgaataagaaatgagtcgtcactttagtccttaaatgcagataaattgtaaaatagttccagaatgtagattctgttagt 22469614  T
Q  138 caatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||||||||||||||  | ||||| ||||||| |||||||| ||||    
T  22469613 caatttaatccctgaattcaaactccattagtcaatttagtccctgaa 22469566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 37544071 - 37543926
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtca 139  Q
    ||||||||||||||||| | |||| ||||  ||||| || || | || ||||||| ||||||||||||||||| ||  |   |||| |||||||||||||    
T  37544071 attagtcactttagtccctgaatatgaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 37543972  T
Q  140 atttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||||||||||||| ||| ||||||||| | |||||||| ||||    
T  37543971 atttaatccctgaatgcagattccgttagttaatttagtccctgaa 37543926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 22326545 - 22326446
Alignment:
Q  148 cctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaa 247  Q
    |||||||||||| ||||||| ||| |||||||| | ||||||||||| | |||||||||||||| |||||||| |||||||||| ||||||  |||||||    
T  22326545 cctgaatgtagattccgttaatcactttagtccctaaaattgaccaatagagtctacattcaaggactattttacaatttctcagcattcagagactaaa 22326446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 18324046 - 18324139
Alignment:
Q  89 tgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtcctt 182  Q
    ||||||||||||||||| |||||| |||||  ||||| ||||| |||||||||||| | |||||||| | ||||||||||||| ||||||||||    
T  18324046 tgaatgcagataaattgtaaaatagtccctgaatgtagactttattagtcaatttagttcctgaatgcaaactccgttagtcaatttagtcctt 18324139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 23976370 - 23976233
Alignment:
Q  38 agattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagt 137  Q
    ||||||||||||||||||| | |||| |||||||||||||| || | |  ||||||| |||||||||| |||||| |||||  |||||  || |||||||    
T  23976370 agattagtcactttagtcc-tcaataagaaatgagtcgtcattttagttcctgaatgtagataaattgtaaaatagtccctgaatgtag-ctctgttagt 23976273  T
Q  138 caatttaatccctgaatgtagactccgttagtcattttag 177  Q
    |||||||  ||||||||| |||||||||| |||| |||||    
T  23976272 caatttagcccctgaatgcagactccgttggtcaatttag 23976233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 230
Target Start/End: Complemental strand, 22469586 - 22469490
Alignment:
Q  133 ttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    |||||||||||| ||||||||| || |||||||||||||  ||| ||| ||||||||||||||| ||||| |||||| | ||| ||||||||||||||    
T  22469586 ttagtcaatttagtccctgaat-taaactccgttagtcaccttaatccctgaaattgaccaacagagtctgcattcagggactgttttgcaatttctc 22469490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 35202593 - 35202738
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    ||||||||||||| |||||||  | |||||||||  |||  ||| || | || ||||||||| ||||||||||||||  ||| || ||||| ||| ||||    
T  35202593 gggagattagtcattttagtcattgaataggaaagaagttatcattttagtccctgaatgcaaataaattgcaaaatggtccttaaatgtagactatgtt 35202692  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagtcc 180  Q
    |||||||||| | |||||||| ||| || |||||||| ||||||||    
T  35202693 agtcaatttagttcctgaatgcagattctgttagtcaatttagtcc 35202738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 12106867 - 12106970
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtca 139  Q
    ||||||||||||||||| | ||| |||||||||| ||||||| | || ||||||||||| ||||||||||| | |||||  ||||| ||| |||| ||||    
T  12106867 attagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctggatgtagactctgttggtca 12106966  T
Q  140 attt 143  Q
    ||||    
T  12106967 attt 12106970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 251
Target Start/End: Complemental strand, 23976242 - 23976127
Alignment:
Q  136 gtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcat 235  Q
    |||||||||  |||||||||||||    |||||||| |||| ||| |||||||||| |||| |||||||||||| | ||| ||||||||||||||  |||    
T  23976242 gtcaatttagcccctgaatgtagatcatgttagtcactttactccctgaaattgactaacagagtctacattcagggactgttttgcaatttctctgcat 23976143  T
Q  236 tcaaggactaaagtga 251  Q
    ||| | ||||||||||    
T  23976142 tcaggaactaaagtga 23976127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 21185802 - 21185905
Alignment:
Q  148 cctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaa 247  Q
    |||||||||| |||| |||||||| |||||||| ||||||||||||||| |||||| ||| | | |   |||| |||||| ||| |||||| ||||||||    
T  21185802 cctgaatgtacactcagttagtcactttagtccatgaaattgaccaacagagtctatatttagggaacgtttttcaatttttcagcattcagggactaaa 21185901  T
Q  248 gtga 251  Q
    ||||    
T  21185902 gtga 21185905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 31254027 - 31254107
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaag 211  Q
    |||||||||||||| ||||| |||||||| |  |||||||| |||| ||| ||||||| ||||||  ||||||||||||||    
T  31254027 tgttagtcaatttagtccctaaatgtagattttgttagtcactttaatccctgaaattaaccaacggagtctacattcaag 31254107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 4289081 - 4288958
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgacca---acaaagtctacattcaagtactattttgcaattt 227  Q
    ||||| |||||||| ||  ||||||||||||| |||||||| |||| ||| |||||||||| |   | | ||||||||||| || | | |||||||||||    
T  4289081 tgttaatcaatttagtctttgaatgtagactctgttagtcactttaatccctgaaattgactaattaaagagtctacattcgaggaatgttttgcaattt 4288982  T
Q  228 ctcatcattcaaggactaaagtga 251  Q
    |||  |||||| | ||||||||||    
T  4288981 ctctacattcatgaactaaagtga 4288958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 31253995 - 31254044
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtcc 180  Q
    |||||||||||||| |||||||||| |||||| |||||||| ||||||||    
T  31253995 tgttagtcaatttagtccctgaatgcagactctgttagtcaatttagtcc 31254044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 25149237 - 25149341
Alignment:
Q  39 gattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtc 138  Q
    ||||||||| |||||||| | ||| | ||| |||| ||||||| |||| ||||||||| | ||||||||||| | |||||  ||||| ||| |||| |||    
T  25149237 gattagtcattttagtccctgaatggaaaaagagtagtcactttaatccctgaatgcaaagaaattgcaaaacagtccctgaatgtagactctgttggtc 25149336  T
Q  139 aattt 143  Q
    |||||    
T  25149337 aattt 25149341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 41358912 - 41358840
Alignment:
Q  89 tgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctgaatgtagact 161  Q
    |||||| ||||||||||||||||| |||||  ||||| ||| ||||| |||||||| ||| |||||| |||||    
T  41358912 tgaatgtagataaattgcaaaatagtccctgaatgtagactctgttaatcaatttagtccatgaatgcagact 41358840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 168
Target Start/End: Complemental strand, 22326636 - 22326557
Alignment:
Q  89 tgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctgaatgtagactccgttag 168  Q
    ||||||||||||||||| |||||||||| || || || | ||||||| |||||||| || ||||||| ||| | ||||||    
T  22326636 tgaatgcagataaattgtaaaataatccttaaatatagattttgttaatcaatttagtctctgaatgcagatttcgttag 22326557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 37543968 - 37544031
Alignment:
Q  184 aaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaa 247  Q
    |||||||| ||||||||||||| ||||  ||||||||||||||| ||  |||||| ||||||||    
T  37543968 aaattgactaacaaagtctacaatcaatgactattttgcaatttatctacattcagggactaaa 37544031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 12107020 - 12107078
Alignment:
Q  193 aacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtga 251  Q
    |||| |||||||||||| | | ||||||||||||| ||  |||||||||||||||||||    
T  12107020 aacagagtctacattcagggattattttgcaatttatctgcattcaaggactaaagtga 12107078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 23625110 - 23625192
Alignment:
Q  148 cctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    |||||||| |||||| ||| |||| |||||||| ||||||||| ||||  |||||||||||| | | | |||| |||||||||    
T  23625110 cctgaatgcagactctgttggtcaatttagtccctgaaattgatcaacgcagtctacattcaggaagtgttttacaatttctc 23625192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 29585610 - 29585576
Alignment:
Q  127 actttgttagtcaatttaatccctgaatgtagact 161  Q
    |||||||||||||||||| ||||||||||||||||    
T  29585610 actttgttagtcaatttagtccctgaatgtagact 29585576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 37494465 - 37494395
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtc 201  Q
    |||||||||||||| |||||||||| ||||| | ||||||| || | ||| | ||||||||||||| ||||    
T  37494465 tgttagtcaatttagtccctgaatgcagacttcattagtcaattcactccctaaaattgaccaacagagtc 37494395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 10289327 - 10289420
Alignment:
Q  137 tcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    |||||||| ||  |||||| | ||| ||||||||| ||||| |||| ||||||||||  | |||||||||||| | ||| |||| |||||||||    
T  10289327 tcaatttagtctttgaatgcaaacttcgttagtcactttagcccttaaaattgaccactagagtctacattcaggaactgttttacaatttctc 10289420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 21124446 - 21124499
Alignment:
Q  127 actttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtcc 180  Q
    |||| ||||||||||||| ||||  | |||||||||||||||||| ||||||||    
T  21124446 acttcgttagtcaatttagtcccctagtgtagactccgttagtcaatttagtcc 21124499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 22426949 - 22426882
Alignment:
Q  184 aaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtgat 252  Q
    |||||||| |||| || ||||||||| | ||||||||||||||| ||  |||||| |||||||||||||    
T  22426949 aaattgactaacagagactacattcagggactattttgcaatttatc-gcattcatggactaaagtgat 22426882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 8e-42; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 35 - 185
Target Start/End: Original strand, 50335436 - 50335586
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||| | || ||||||||||||||||||||||||| ||| |  ||||| ||||||||    
T  50335436 gggagattagtcactttaatccctgaataggaaatgagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccatgaatgtagactttgtt 50335535  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||||||| |||||||||| |||||||||| |||| |||||||| ||||    
T  50335536 agtcaatttagtccctgaatgcagactccgttcgtcaatttagtccctgaa 50335586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 185
Target Start/End: Original strand, 37607968 - 37608117
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    ||||||||||| |||| ||||| | |||||||||||| | |||| || | || ||||||||| ||||||||||||||| ||| |  ||||| ||| ||||    
T  37607968 gggagattagtaactt-agtccctgaataggaaatgaattgtcattttagtccctgaatgcatataaattgcaaaatagtccttgaatgtagactctgtt 37608066  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||||||| ||| |||||| |||||| |||||||| |||||||||||||    
T  37608067 agtcaatttagtccttgaatgcagactctgttagtcaatttagtccttgaa 37608117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 179
Target Start/End: Original strand, 13735465 - 13735584
Alignment:
Q  60 aataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctgaatgtaga 159  Q
    |||||||||  ||||||||||| | || ||||||||||||||||| ||||||| ||||   ||||| ||| |||||||||||||| || ||||||| |||    
T  13735465 aataggaaagaagtcgtcactttagtccctgaatgcagataaattacaaaatagtcccacaatgtagactctgttagtcaatttagtctctgaatgcaga 13735564  T
Q  160 ctccgttagtcattttagtc 179  Q
    |||||||||||| |||||||    
T  13735565 ctccgttagtcaatttagtc 13735584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 251
Target Start/End: Original strand, 50335569 - 50335684
Alignment:
Q  136 gtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcat 235  Q
    ||||||||| ||||||||||||||||||| || ||| |||||||| | ||||||||||||| |||||||||||| | ||| ||||||||||| ||  |||    
T  50335569 gtcaatttagtccctgaatgtagactccgctaatcactttagtccctaaaattgaccaacagagtctacattcagggactgttttgcaatttgtctgcat 50335668  T
Q  236 tcaaggactaaagtga 251  Q
    ||| ||| ||||||||    
T  50335669 tcagggattaaagtga 50335684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 230
Target Start/End: Complemental strand, 8097869 - 8097772
Alignment:
Q  133 ttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    |||||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| ||| |   ||| ||||||||||||||    
T  8097869 ttagtcaatttagttcctgaatgtagactctgttagtcattttagtccttaaaattgaccaacatagtctatatttagagactgttttgcaatttctc 8097772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 247
Target Start/End: Original strand, 37608095 - 37608210
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| |||| |||||||||||||| |  | |||||||| | ||| ||||||||||||||    
T  37608095 tgttagtcaatttagtccttgaatgtagactccgttagtcactttggtccctgaaattgaccaac-agttttacattcagggactgttttgcaatttctc 37608193  T
Q  231 atcattcaaggactaaa 247  Q
      |||||| ||||||||    
T  37608194 tgcattcagggactaaa 37608210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 13735569 - 13735667
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattga-ccaacaaagtctacattcaagtactattttgcaatttct 229  Q
    ||||||||||||| ||  | |||||||||||||||||||| |||||||| ||||||||| | |||| |||||||||||| | ||| |||||||||||||    
T  13735569 gttagtcaatttagtcaataaatgtagactccgttagtcactttagtccctgaaattgatcaaacagagtctacattcagggactgttttgcaatttct 13735667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 178
Target Start/End: Complemental strand, 8097989 - 8097856
Alignment:
Q  45 tcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaattta 144  Q
    |||||||||||| ||||||||||||||||  |||||| | || ||||||||||||||||  ||||||| ||| |  || || | | ||||||||||||||    
T  8097989 tcactttagtccctaaataggaaatgagttttcactttagtccctgaatgcagataaatcacaaaatagtccatgaatatagattctgttagtcaattta 8097890  T
Q  145 atccctgaatgtagactccgttagtcattttagt 178  Q
     ||| |||||  | ||||| ||||||| ||||||    
T  8097889 gtccttgaatacatactccattagtcaatttagt 8097856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 50335544 - 50335477
Alignment:
Q  184 aaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtga 251  Q
    |||||||| ||||||||||||||||| | ||||||||||||||| ||  |||||| ||||||||||||    
T  50335544 aaattgactaacaaagtctacattcatggactattttgcaatttatctgcattcagggactaaagtga 50335477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 42847297 - 42847198
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtca 139  Q
    ||||||||||||||||  |  ||||||||  ||| ||||||| | || ||||||||||| ||||||||||| ||||| |  ||||| |||||||||||||    
T  42847297 attagtcactttagtctctggataggaaaaaagtagtcactttattccctgaatgcagagaaattgcaaaacaatccttgaatgtagactttgttagtca 42847198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 42847191 - 42847261
Alignment:
Q  181 ttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtga 251  Q
    |||||| |||| ||||||||||||||||||| | | ||||||||||||||  |||||| ||| ||||||||    
T  42847191 ttgaaactgactaacaaagtctacattcaaggattgttttgcaatttctctgcattcagggaataaagtga 42847261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 11633188 - 11633235
Alignment:
Q  34 agggagattagtcactttagtccataaataggaaatgagtcgtcactt 81  Q
    ||||||||||||||||||| ||||| |||||||||  |||||||||||    
T  11633188 agggagattagtcactttaatccatgaataggaaagaagtcgtcactt 11633235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 37608075 - 37608032
Alignment:
Q  184 aaattgaccaacaaagtctacattcaagtactattttgcaattt 227  Q
    |||||||| |||| |||||||||||||| |||||||||||||||    
T  37608075 aaattgactaacagagtctacattcaaggactattttgcaattt 37608032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 50335720 - 50335617
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtca 139  Q
    |||||||||||||||||   ||| | |||  ||| ||||||| |||| ||||||||||| ||||||||||| | |||||  ||||| ||| |||| ||||    
T  50335720 attagtcactttagtcccagaatggaaaaaaagtagtcactttaatccctgaatgcagacaaattgcaaaacagtccctgaatgtagactctgttggtca 50335621  T
Q  140 attt 143  Q
    ||||    
T  50335620 attt 50335617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 37608249 - 37608163
Alignment:
Q  41 ttagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaa 127  Q
    |||||||||||||||| | ||| ||||| |||| |||| || | || ||||||||||| ||||||||||| | |||||  |||||||    
T  37608249 ttagtcactttagtccttgaatgggaaaggagtagtcattttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtaaa 37608163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 11633272 - 11633329
Alignment:
Q  150 tgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacatt 207  Q
    |||||||||| |  |||||||| |||||||||||||||||||||| | ||||| ||||    
T  11633272 tgaatgtagattatgttagtcactttagtccttgaaattgaccaatagagtctgcatt 11633329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 13735414 - 13735463
Alignment:
Q  32 caagggagattagtcactttagtccataaataggaaatgagtcgtcactt 81  Q
    ||||||||||||||||||||||||| | ||||||||| |||  |||||||    
T  13735414 caagggagattagtcactttagtcccttaataggaaaggagcagtcactt 13735463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 32374090 - 32374021
Alignment:
Q  182 tgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtga 251  Q
    |||||||||| |||| |||||||||||||| ||| |||||||| ||||   ||| || ||||||||||||    
T  32374090 tgaaattgactaacacagtctacattcaagaactgttttgcaaattctatgcatccagggactaaagtga 32374021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 32374128 - 32374092
Alignment:
Q  125 aaactttgttagtcaatttaatccctgaatgtagact 161  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  32374128 aaactctgttagtcaatttagtccctgaatgtagact 32374092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 32374152 - 32374100
Alignment:
Q  133 ttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||||||||| |||||||||| | |||| |||||||| |||||||| ||||    
T  32374152 ttagtcaatttagtccctgaatgcaaactctgttagtcaatttagtccctgaa 32374100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 1e-40; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 33 - 177
Target Start/End: Original strand, 13536553 - 13536697
Alignment:
Q  33 aagggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttg 132  Q
    |||||||||||||||||||||||| | ||||||||| ||| |||||||| |||  ||||||||||||||||||||||||| |||||  ||||| ||| ||    
T  13536553 aagggagattagtcactttagtccctgaataggaaaggagccgtcactttaatgcctgaatgcagataaattgcaaaatagtccctgaatgtagactctg 13536652  T
Q  133 ttagtcaatttaatccctgaatgtagactccgttagtcattttag 177  Q
    |||||||||||| |||||||||| ||||||||||||||| |||||    
T  13536653 ttagtcaatttagtccctgaatgcagactccgttagtcaatttag 13536697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 35 - 178
Target Start/End: Complemental strand, 10588155 - 10588012
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    |||||||||||||||||||||| | ||||||||| |||| ||||||||| ||  |||||||||||||||||||||||| ||| |  ||||| ||||| ||    
T  10588155 gggagattagtcactttagtccctgaataggaaaggagttgtcacttaagtccatgaatgcagataaattgcaaaatagtccatgaatgtagactttatt 10588056  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagt 178  Q
    |||||||||| ||| |||||| ||||||||||||||| ||||||    
T  10588055 agtcaatttagtccttgaatgcagactccgttagtcaatttagt 10588012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 37 - 185
Target Start/End: Original strand, 25089149 - 25089297
Alignment:
Q  37 gagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttag 136  Q
    |||||||||||||||||||||| ||||||| | |||||| ||||| | || ||||||||||||||||||||||||| |||||  ||||| ||| ||||||    
T  25089149 gagattagtcactttagtccatgaataggagaggagtcgccactttagtctctgaatgcagataaattgcaaaatagtccctgaatgtagactctgttag 25089248  T
Q  137 tcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||||| ||  |||||| ||||||| ||||||| |||||||| ||||    
T  25089249 tcaatttagtcattgaatgcagactccattagtcaatttagtccctgaa 25089297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 132 - 251
Target Start/End: Original strand, 26705152 - 26705271
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctca 231  Q
    ||||||||||||| ||||||||||||||  |||||||||| |||||||| |||||||||||||||| ||||||||||| | ||| ||||||||||||||     
T  26705152 gttagtcaatttagtccctgaatgtagaacccgttagtcactttagtccctgaaattgaccaacaacgtctacattcagggactgttttgcaatttctct 26705251  T
Q  232 tcattcaaggactaaagtga 251  Q
     |||||| ||||||||||||    
T  26705252 acattcagggactaaagtga 26705271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 127 - 251
Target Start/End: Complemental strand, 21222625 - 21222501
Alignment:
Q  127 actttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatt 226  Q
    |||| ||||||||||||| ||||||||||||||||| ||||||||  ||| |||||||||||||| |||| ||||||| |||||| ||| ||||||||||    
T  21222625 acttcgttagtcaatttagtccctgaatgtagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaaggactgttttgcaatt 21222526  T
Q  227 tctcatcattcaaggactaaagtga 251  Q
    ||||  |||||||||||| ||||||    
T  21222525 tctctgcattcaaggacttaagtga 21222501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 251
Target Start/End: Complemental strand, 19295435 - 19295317
Alignment:
Q  133 ttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcat 232  Q
    |||||||||||| ||||||||||||||||||||| |||| |||||||| |||||||||| |||| || ||| ||| | | ||| |||||||||||||||     
T  19295435 ttagtcaatttagtccctgaatgtagactccgttggtcactttagtccctgaaattgactaacatagcctatatttagggactgttttgcaatttctcag 19295336  T
Q  233 cattcaaggactaaagtga 251  Q
    |||||| ||||||||||||    
T  19295335 cattcagggactaaagtga 19295317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 19295565 - 19295415
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    |||||||||||||||||||||  | ||||| ||| ||||||| |||| | || ||||||||||||||||| ||||||| |||||  ||| | ||| ||||    
T  19295565 gggagattagtcactttagtctctgaatagaaaaggagtcgttactttagtccctgaatgcagataaattacaaaatagtccctgaatgcagactctgtt 19295466  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||||||| |||||||||| ||||| | ||||||| |||||||| ||||    
T  19295465 agtcaatttagtccctgaatgcagacttcattagtcaatttagtccctgaa 19295415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 251
Target Start/End: Original strand, 25089277 - 25089395
Alignment:
Q  133 ttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcat 232  Q
    |||||||||||| |||||||||||||||| | ||||||| |||||||| ||||||||||||||| |||||| ||||| | ||| ||||||||||||||      
T  25089277 ttagtcaatttagtccctgaatgtagacttcattagtcactttagtccatgaaattgaccaacatagtctatattcaggaactgttttgcaatttctctg 25089376  T
Q  233 cattcaaggactaaagtga 251  Q
    ||||||  |||||||||||    
T  25089377 cattcagtgactaaagtga 25089395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 249
Target Start/End: Original strand, 10862137 - 10862253
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctca 231  Q
    ||||||||||||| ||||||||| ||||||| ||| |||| |||||||| |||||||||||||  |||||||||||||  |||| ||||||||||||||     
T  10862137 gttagtcaatttagtccctgaatatagactctgttcgtcactttagtccctgaaattgaccaa-taagtctacattcagctactgttttgcaatttctct 10862235  T
Q  232 tcattcaaggactaaagt 249  Q
     |||||| ||||||||||    
T  10862236 gcattcagggactaaagt 10862253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 185
Target Start/End: Original strand, 10862008 - 10862158
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    ||||||||||||| |||||||  | |||   ||| |||||||||||| | || ||||||||| || ||||||||  || |||||  ||||| ||| ||||    
T  10862008 gggagattagtcattttagtctctgaatgtaaaaggagtcgtcactttagtccctgaatgcaaattaattgcaatgtagtccctgaatgtagactctgtt 10862107  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||||| |||||||||| | ||||||||||||||| |||||||| ||||    
T  10862108 agtcaattcaatccctgaaggcagactccgttagtcaatttagtccctgaa 10862158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 13536700 - 13536804
Alignment:
Q  147 ccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaa 246  Q
    |||||||||||||||| |||||||| |||||||| |||||| |||||| | |||||||||||| | ||| ||||||||||||||   |||||  ||||||    
T  13536700 ccctgaatgtagactctgttagtcactttagtccctgaaatggaccaatagagtctacattcagggactgttttgcaatttctctgtattcagagactaa 13536799  T
Q  247 agtga 251  Q
    |||||    
T  13536800 agtga 13536804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 10672773 - 10672696
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattca 209  Q
    ||||||||||||| |||||||||||||||| ||||||||| | |||| | ||||||| ||||||| ||||||||||||    
T  10672773 gttagtcaatttagtccctgaatgtagacttcgttagtcactatagttcctgaaatttaccaacatagtctacattca 10672696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 21222746 - 21222599
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgca--gataaattgcaaaataatccctatatgtaaactttgttagt 137  Q
    |||||||||||| |||| | |||||||||  | ||||||||| | || ||||||| |  |||||||||||||||| || ||  ||||| ||| |||||||    
T  21222746 attagtcactttggtccctgaataggaaagaaatcgtcactttagtccctgaatgtatagataaattgcaaaatagtctctgaatgtatactatgttagt 21222647  T
Q  138 caatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    ||| ||| || ||||||| ||||| ||||||||| |||||||| ||||    
T  21222646 caacttagtctctgaatgcagacttcgttagtcaatttagtccctgaa 21222599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 19295281 - 19295384
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtca 139  Q
    ||||||||||||||||| | ||||||||| |||| ||||||| | || |||||||| || ||||||||||| | |||||| || ||  || |||||||||    
T  19295281 attagtcactttagtccttgaataggaaaggagtagtcactttagtccctgaatgctgagaaattgcaaaacagtccctaaatataggctatgttagtca 19295380  T
Q  140 attt 143  Q
    ||||    
T  19295381 attt 19295384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 10587992 - 10587923
Alignment:
Q  182 tgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtga 251  Q
    ||||||||| ||||| |||||||||||| | ||| ||||||||||||||  |||||| ||||||||||||    
T  10587992 tgaaattgaacaacatagtctacattcagggactgttttgcaatttctctgcattcagggactaaagtga 10587923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 10587887 - 10587990
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtca 139  Q
    ||||||||||||||||||| |||  |||| |||| ||||||| | || ||||||||||| ||||||||||| | |||||  ||||| ||| ||||  |||    
T  10587887 attagtcactttagtccatgaatgagaaaggagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactatgttgttca 10587986  T
Q  140 attt 143  Q
    ||||    
T  10587987 attt 10587990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 10672847 - 10672752
Alignment:
Q  89 tgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||||||||||||||||||||| | |||  ||||| | ||||||| |||||||| || ||||||| | | | ||||||||| |||||||| ||||    
T  10672847 tgaatgcagataaattgcaaaatagttcctgaatgtaga-tttgttaatcaatttagtctctgaatgcatatttcgttagtcaatttagtccctgaa 10672752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 10588047 - 10588114
Alignment:
Q  184 aaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtga 251  Q
    |||||||| || |||||||||||||| | ||||||||||||||| ||  |||||| ||||| ||||||    
T  10588047 aaattgactaataaagtctacattcatggactattttgcaatttatctgcattcatggacttaagtga 10588114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 25089255 - 25089189
Alignment:
Q  184 aaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtg 250  Q
    |||||||| |||| |||||||||||| | ||||||||||||||| ||  ||||||  ||||||||||    
T  25089255 aaattgactaacagagtctacattcagggactattttgcaatttatctgcattcagagactaaagtg 25089189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 25089431 - 25089361
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaa 110  Q
    ||||||||||||||||| | ||| |  ||||| | ||||||| | |||||||||||||| |||||||||||    
T  25089431 attagtcactttagtccctgaatggacaatgaatagtcactttagtcactgaatgcagagaaattgcaaaa 25089361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 26705120 - 26705173
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||| |||||||| ||||||||| |||| ||||||||||| |||||||| ||||    
T  26705120 gttaatcaatttagtccctgaatatagaatccgttagtcaatttagtccctgaa 26705173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 75 - 251
Target Start/End: Complemental strand, 32092971 - 32092795
Alignment:
Q  75 gtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctgaatgtagactccgttagtcattt 174  Q
    ||||||| | || |||||||||||||||||| |||||| |||||  ||||| ||| |||||||||||||| |||||||||||||||| ||||||||| ||    
T  32092971 gtcactttagtccctgaatgcagataaattgaaaaatagtccctgaatgtagactctgttagtcaatttagtccctgaatgtagacttcgttagtcactt 32092872  T
Q  175 tagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtga 251  Q
    |||| | ||| |||||| |||| |||||||||||| | ||| ||||||||||||||  |||||| ||||||||||||    
T  32092871 tagttcctgagattgacaaacagagtctacattcagggactgttttgcaatttctctgcattcagggactaaagtga 32092795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 185
Target Start/End: Complemental strand, 39598792 - 39598641
Alignment:
Q  34 agggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgt 133  Q
    ||||| ||||||||||||||||| | |||||||||  | |  ||| || | |||||||||||||||||||||||||||| |||||  ||||| |||||||    
T  39598792 agggatattagtcactttagtccctcaataggaaagaaattttcattttagtcactgaatgcagataaattgcaaaatagtccctgaatgtagactttgt 39598693  T
Q  134 tagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    | ||||||||| || ||||||||| ||||||||||||| |||||||| ||||    
T  39598692 tggtcaatttagtcgctgaatgtatactccgttagtcaatttagtccctgaa 39598641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 39598662 - 39598567
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaattt 227  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||||||||||| ||| ||||| |||||    
T  39598662 gttagtcaatttagtccctgaatgtagactccgttagtcactttagtccctaaaattgactaacaaagtctacattcaagaactgttttgtaattt 39598567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 136 - 249
Target Start/End: Original strand, 22092988 - 22093101
Alignment:
Q  136 gtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcat 235  Q
    ||||||||| ||||||||| ||||||||||| |||| |||||||| |||| |||||||||| | ||||||||||   ||| ||||||||||||||  |||    
T  22092988 gtcaatttagtccctgaatatagactccgtttgtcactttagtccctgaatttgaccaacagaatctacattcagagactgttttgcaatttctctacat 22093087  T
Q  236 tcaaggactaaagt 249  Q
    ||| ||||||||||    
T  22093088 tcagggactaaagt 22093101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 24007019 - 24006916
Alignment:
Q  148 cctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaa 247  Q
    ||||||||||||||| |||| |||||||||||  |||||||||  |||| |||||||||||| | ||| ||||||||||||||  |||||| ||||||||    
T  24007019 cctgaatgtagactctgttaatcattttagtctctgaaattgagtaacagagtctacattcagggactgttttgcaatttctctgcattcagggactaaa 24006920  T
Q  248 gtga 251  Q
    ||||    
T  24006919 gtga 24006916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 249
Target Start/End: Original strand, 17914063 - 17914214
Alignment:
Q  98 ataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaa 197  Q
    ||||||||||||||||||| |  ||||| | ||||||||||||||||  |||| |||||||| |  |||||||| |||| ||  | |||||||| || |     
T  17914063 ataaattgcaaaataatccttgaatgtagattttgttagtcaatttagaccctaaatgtagattttgttagtcactttaatcactaaaattgactaatag 17914162  T
Q  198 agtctacattcaagtactattttgcaatttctcatcattcaaggactaaagt 249  Q
    |||||||||||||  ||| ||||||||||||||  |||||  ||||||||||    
T  17914163 agtctacattcaaaaactgttttgcaatttctctacattcttggactaaagt 17914214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 185
Target Start/End: Original strand, 22092880 - 22093005
Alignment:
Q  60 aataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctgaatgtaga 159  Q
    ||||||||| |||||||||||| | ||  ||| ||||||||||||| |||||| |||||  ||||| ||| ||||||||| |||| | |||||||| |||    
T  22092880 aataggaaaggagtcgtcactttagtccttgattgcagataaattgtaaaatagtccctgaatgtagactctgttagtcagtttagttcctgaatgcaga 22092979  T
Q  160 ctccgttagtcattttagtccttgaa 185  Q
    |||| || |||| |||||||| ||||    
T  22092980 ctccattcgtcaatttagtccctgaa 22093005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 230
Target Start/End: Complemental strand, 31499505 - 31499408
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    ||||||||||||| ||| ||||||||||||   || |||| ||| |||| ||||||||||||||||| |||||||| ||| ||| ||||||||||||||    
T  31499505 gttagtcaatttagtccttgaatgtagactttatttgtcactttggtccctgaaattgaccaacaaaatctacattaaag-actgttttgcaatttctc 31499408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 31499594 - 31499484
Alignment:
Q  75 gtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctgaatgtagactccgttagtcattt 174  Q
    ||||||| ||||  |||||| |||||||||| |||||| |||||  ||||| | | ||||||||| |||| |  ||||||| ||||||||||||||| ||    
T  31499594 gtcactttaatctttgaatgtagataaattgtaaaatagtccctgaatgtagaatctgttagtcattttagtttctgaatgcagactccgttagtcaatt 31499495  T
Q  175 tagtccttgaa 185  Q
    |||||||||||    
T  31499494 tagtccttgaa 31499484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 141
Target Start/End: Original strand, 32092759 - 32092860
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtca 139  Q
    ||||||||||||||||| | ||| |||||||||| ||||||| | || ||||||||||| ||||||||||| | |||||  ||||| ||| |||| ||||    
T  32092759 attagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgtttgtca 32092858  T
Q  140 at 141  Q
    ||    
T  32092859 at 32092860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 179
Target Start/End: Original strand, 31819910 - 31820053
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    ||||||||||||||||||||||  || ||||||| || |||||| || | || || ||||||||||||||| |||||| || ||  ||||| ||| ||||    
T  31819910 gggagattagtcactttagtcccgaa-taggaaaggaatcgtcattttagtccctaaatgcagataaattggaaaatagtcactgaatgtagactctgtt 31820008  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagtc 179  Q
    |||| ||||| ||| |||||| |||||   ||||||| |||||||    
T  31820009 agtccatttagtccttgaatgcagactttcttagtcaatttagtc 31820053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 31820033 - 31820136
Alignment:
Q  127 actttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatt 226  Q
    ||||| |||||||||||| || ||||||||| ||||||||| ||| |||||||| | |||||||| |||| | |||||||||| | ||| ||||| | ||    
T  31820033 actttcttagtcaatttagtctctgaatgtatactccgttaatcactttagtccctaaaattgactaacagaatctacattcatgaactgttttgtattt 31820132  T
Q  227 tctc 230  Q
    ||||    
T  31820133 tctc 31820136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 24007166 - 24007033
Alignment:
Q  33 aagggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttg 132  Q
    |||||| |||||||||||| |||| | | ||||||||||||||| |||| | ||  ||||| ||||||||||| ||||||  |  |  ||||| ||| ||    
T  24007166 aagggaaattagtcactttggtccttgactaggaaatgagtcgttactttagtccttgaatacagataaattgtaaaatagactttgaatgtagactctg 24007067  T
Q  133 ttagtcaatttaatccctgaatgtagactccgtt 166  Q
    |||||||||||| ||| |||||| ||| ||||||    
T  24007066 ttagtcaatttagtccatgaatgcagattccgtt 24007033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 171
Target Start/End: Original strand, 8219263 - 8219302
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtca 171  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  8219263 gttagtcaatttaatccctgaatgtggactccgttagtca 8219302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 39598683 - 39598726
Alignment:
Q  184 aaattgaccaacaaagtctacattcaagtactattttgcaattt 227  Q
    |||||||||||||||||||||||||| | |||||||||||||||    
T  39598683 aaattgaccaacaaagtctacattcagggactattttgcaattt 39598726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 32092903 - 32092970
Alignment:
Q  184 aaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtga 251  Q
    |||||||| |||| |||||||||||| | |||||||| |||||| ||  |||||| ||||||||||||    
T  32092903 aaattgactaacagagtctacattcagggactatttttcaatttatctgcattcagggactaaagtga 32092970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 8219220 - 8219284
Alignment:
Q  121 atgtaaactttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    ||||| ||| |||||||||||||| |  ||||||| ||||||||||||||| |||| ||| ||||    
T  8219220 atgtagactctgttagtcaatttagtttctgaatgcagactccgttagtcaatttaatccctgaa 8219284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 10760284 - 10760141
Alignment:
Q  42 tagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaat 141  Q
    ||||||||||| ||| | ||||||||||||| |||||||| | || ||||||||||||||||||||||||| |||||| ||||| ||| ||| |||||||    
T  10760284 tagtcactttaatccctgaataggaaatgagccgtcactttagtctctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtaagtcaat 10760185  T
Q  142 ttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    ||| |||||||||| ||||||||||||||| |||||||| ||||    
T  10760184 ttagtccctgaatgcagactccgttagtcaatttagtccctgaa 10760141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 186
Target Start/End: Complemental strand, 13753515 - 13753362
Alignment:
Q  33 aagggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttg 132  Q
    |||||||||||||||||||||||| |||||||||||  |||||||| || | || ||||||||||||||||||||||||| |||||| ||||| ||| ||    
T  13753515 aagggagattagtcactttagtccctaaataggaaagaagtcgtcattttagtctctgaatgcagataaattgcaaaatagtccctaaatgtagactctg 13753416  T
Q  133 ttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaa 186  Q
    | |||||||||| ||| | |||| ||||||||||||||| ||||| || |||||    
T  13753415 taagtcaatttagtccttaaatgcagactccgttagtcaatttagcccctgaaa 13753362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 131 - 247
Target Start/End: Original strand, 17497118 - 17497234
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    ||||||| |||||| ||||||||||||||||||||  |||| |||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  17497118 tgttagttaatttagtccctgaatgtagactccgtcggtcactttagtccctgaaattgaccaacaaagtctacattcagggactattttgcaatttctc 17497217  T
Q  231 atcattcaaggactaaa 247  Q
      |||||| ||||||||    
T  17497218 tgcattcagggactaaa 17497234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 132 - 250
Target Start/End: Complemental strand, 10760162 - 10760045
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctca 231  Q
    ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||| | ||| |||| |||||||||     
T  10760162 gttagtcaatttagtccctgaatgtagactccgttaatcattt-agtccttgaaattgaccaacaaagtttacattcagggactgtttttcaatttctct 10760064  T
Q  232 tcattcaaggactaaagtg 250  Q
     |||||| | |||||||||    
T  10760063 acattcaggaactaaagtg 10760045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 127 - 251
Target Start/End: Original strand, 19491791 - 19491915
Alignment:
Q  127 actttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatt 226  Q
    |||| |||| |||||||| ||||||||| ||||||| ||||||||  ||| |||||||||||||| |||| ||||||| |||||| ||| ||||||||||    
T  19491791 acttcgttaatcaatttagtccctgaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaagcactgttttgcaatt 19491890  T
Q  227 tctcatcattcaaggactaaagtga 251  Q
    ||||  |||||||||||| ||||||    
T  19491891 tctctgcattcaaggacttaagtga 19491915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 13753384 - 13753265
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctca 231  Q
    |||||||||||||  ||||||| ||||||||| | ||||| |||||||| ||||||||||||||| |||||||| |||  |||| ||||||||||||||     
T  13753384 gttagtcaatttagcccctgaaagtagactccatcagtcactttagtccctgaaattgaccaacagagtctacactcagatactgttttgcaatttctct 13753285  T
Q  232 tcattcaaggactaaagtga 251  Q
     ||||||| |||||||||||    
T  13753284 gcattcaatgactaaagtga 13753265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 21211572 - 21211453
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctca 231  Q
    |||||| |||||| || ||||||||||| | ||||||||| |||||| | ||||||||||||||||||||||||||||   ||| ||||||||||| ||     
T  21211572 gttagttaatttagtctctgaatgtagattgcgttagtcactttagttcctgaaattgaccaacaaagtctacattcagagactgttttgcaatttttct 21211473  T
Q  232 tcattcaaggactaaagtga 251  Q
     |||||| ||||||||||||    
T  21211472 gcattcagggactaaagtga 21211453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 209
Target Start/End: Original strand, 34419599 - 34419681
Alignment:
Q  127 actttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattca 209  Q
    |||| ||||||||||||| ||| | ||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||    
T  34419599 acttcgttagtcaatttagtccttaaatgtagactctgttggtcattttagtccctgaaattgaccaacaaagtctacattca 34419681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 251
Target Start/End: Complemental strand, 21943903 - 21943779
Alignment:
Q  127 actttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatt 226  Q
    |||||||||||||||||| ||  |||||||||| |  |||| ||| |||||||| | |||||||| |||||||||||||||||||  || ||||||||||    
T  21943903 actttgttagtcaatttagtctttgaatgtagattatgttaatcactttagtccctaaaattgactaacaaagtctacattcaaggtctgttttgcaatt 21943804  T
Q  227 tctcatcattcaaggactaaagtga 251  Q
    ||||  |||||| | ||||||||||    
T  21943803 tctctgcattcaggtactaaagtga 21943779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 179
Target Start/End: Original strand, 30852581 - 30852718
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    |||||||||||||||||||||| | |||||||||| ||||||||||| | || |||||| |||||       |||||| | |||  ||||||||| ||||    
T  30852581 gggagattagtcactttagtccttgaataggaaataagtcgtcactttagtccctgaatacagat-------aaaatagttcctgaatgtaaactctgtt 30852673  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagtc 179  Q
    |||||||||| |||||||||| ||||| ||| ||||| |||||||    
T  30852674 agtcaatttagtccctgaatgcagacttcgtaagtcaatttagtc 30852718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 2555558 - 2555658
Alignment:
Q  127 actttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatt 226  Q
    |||| ||||||||| ||| |||||||| ||||||| ||||||||| |||| ||| ||||||||||||||  |||||||||||| | ||| ||||||||||    
T  2555558 acttcgttagtcaaattagtccctgaacgtagacttcgttagtcactttaatccctgaaattgaccaacgcagtctacattcagggactgttttgcaatt 2555657  T
Q  227 t 227  Q
    |    
T  2555658 t 2555658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 150 - 230
Target Start/End: Complemental strand, 20430014 - 20429934
Alignment:
Q  150 tgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    |||||||| |||| ||| |||| |||||||||||||||||||||||| |||||||||||||  ||| ||||||||||||||    
T  20430014 tgaatgtaaactctgttcgtcactttagtccttgaaattgaccaacagagtctacattcaaagactgttttgcaatttctc 20429934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 179
Target Start/End: Complemental strand, 19564943 - 19564795
Alignment:
Q  35 gggagattagtcactttagtccat----aaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactt 130  Q
    |||||||||||||||||||||| |    ||||||||||| ||||||||||| | ||  |||||| ||||||||||||||||| |   |  ||||||||||    
T  19564943 gggagattagtcactttagtccctccctaaataggaaatcagtcgtcactttagtccttgaatggagataaattgcaaaatagtttttgaatgtaaactt 19564844  T
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtc 179  Q
     ||||||||||||| ||| ||| |  | ||||||||||||| |||||||    
T  19564843 cgttagtcaatttattccttgattccatactccgttagtcaatttagtc 19564795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 185
Target Start/End: Complemental strand, 21944023 - 21943877
Alignment:
Q  39 gattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtc 138  Q
    ||||| |||||||||||| | ||||| |||||| |||||| || | ||| |||||||| ||||||||||||||| | | |  ||||| ||| ||||| ||    
T  21944023 gattaatcactttagtccctgaatagaaaatgaatcgtcattttagtcattgaatgcaaataaattgcaaaatagttcatgaatgtagactctgttaatc 21943924  T
Q  139 aatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||| |||||||||| | |||  |||||||| ||||||| |||||    
T  21943923 aatttagtccctgaatgcatactttgttagtcaatttagtctttgaa 21943877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 182
Target Start/End: Original strand, 34419500 - 34419622
Alignment:
Q  60 aataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctgaatgtaga 159  Q
    ||||| ||| |||||||||||| |||| | ||||||||||||||||||||||| |||||  ||||||  | |||||||||||||| ||  | || | |||    
T  34419500 aatagaaaaggagtcgtcactttaatctcagaatgcagataaattgcaaaatagtccctgaatgtaagttctgttagtcaatttagtcgataaaagcaga 34419599  T
Q  160 ctccgttagtcattttagtcctt 182  Q
    || ||||||||| ||||||||||    
T  34419600 cttcgttagtcaatttagtcctt 34419622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 185
Target Start/End: Original strand, 2555436 - 2555584
Alignment:
Q  37 gagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttag 136  Q
    ||||||||||||||||| |  | | ||||||||||||||| |||| | || |||||| || ||| ||||||||||| || ||  ||||| ||| ||||||    
T  2555436 gagattagtcactttagcctctgagtaggaaatgagtcgtaactttagtccctgaatacaaatatattgcaaaatagtctctgaatgtagactctgttag 2555535  T
Q  137 tcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||||| ||  |||||| ||||| |||||||||  ||||||| ||||    
T  2555536 tcaatttagtcgttgaatgcagacttcgttagtcaaattagtccctgaa 2555584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 251
Target Start/End: Complemental strand, 30100765 - 30100650
Alignment:
Q  133 ttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcat 232  Q
    ||||||||| || ||||||||||||||||| ||| |||| |||||||| ||||||||   || |||||||||||||||| | | ||||||||||||||      
T  30100765 ttagtcaatatagtccctgaatgtagactctgtttgtcactttagtccctgaaattg---aataaagtctacattcaaggattgttttgcaatttctctg 30100669  T
Q  233 cattcaaggactaaagtga 251  Q
    |||| | ||| ||||||||    
T  30100668 catttagggattaaagtga 30100650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 43548948 - 43549015
Alignment:
Q  184 aaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtga 251  Q
    ||||||||||||| |||||||||||| ||||| ||||||||||||||  || ||||||||||||||||    
T  43548948 aaattgaccaacatagtctacattcatgtactgttttgcaatttctctgcaatcaaggactaaagtga 43549015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 13753229 - 13753299
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaa 110  Q
    ||||||||||||||||| ||||||| |||||||| ||||||| | ||| |||||||||| |||||||||||    
T  13753229 attagtcactttagtccctaaatagaaaatgagtagtcactttagtcattgaatgcagagaaattgcaaaa 13753299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 30852706 - 30852776
Alignment:
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctaca 205  Q
    |||||||||| || ||||||||||| ||||||||||| |||||| | ||||||||||||||| ||||||||    
T  30852706 agtcaatttagtctctgaatgtagattccgttagtcactttagttcatgaaattgaccaacagagtctaca 30852776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 19564810 - 19564713
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttct 229  Q
    ||||||||||||| || ||||||||||||||| ||| ||| |||||||| ||||||||| || || |||||||||| |   ||| |||||||||||||    
T  19564810 gttagtcaatttagtctctgaatgtagactccattaatcactttagtccctgaaattgatcaccagagtctacatttagaaactgttttgcaatttct 19564713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 143
Target Start/End: Original strand, 21211419 - 21211520
Alignment:
Q  42 tagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaat 141  Q
    ||||||||||||||| | ||| |||||||||| ||||||| | || ||||||||||| ||||||||||| | || ||  ||||| |||||||| ||||||    
T  21211419 tagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagaaaaattgcaaaacagtctctgaatgtagactttgttggtcaat 21211518  T
Q  142 tt 143  Q
    ||    
T  21211519 tt 21211520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 143
Target Start/End: Complemental strand, 17497271 - 17497171
Alignment:
Q  43 agtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatt 142  Q
    |||||||||||||| | |||  ||||||||| |||| || | || ||||||||||| ||||||||||||| |||||  ||||| |||||||| |||||||    
T  17497271 agtcactttagtccgtgaatgagaaatgagtagtcattttagtccctgaatgcagagaaattgcaaaatagtccctgaatgtagactttgttggtcaatt 17497172  T
Q  143 t 143  Q
    |    
T  17497171 t 17497171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 21943743 - 21943846
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtca 139  Q
    ||||||||||||||||| | ||| |||||||||| ||||||| | |  ||||||||||| ||||||||||| |  || |  ||||| |||||||||||||    
T  21943743 attagtcactttagtccttgaatgggaaatgagtagtcactttagtacctgaatgcagagaaattgcaaaacagaccttgaatgtagactttgttagtca 21943842  T
Q  140 attt 143  Q
    ||||    
T  21943843 attt 21943846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 178
Target Start/End: Original strand, 11298015 - 11298097
Alignment:
Q  96 agataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctgaatgtagactccgttagtcattttagt 178  Q
    |||||||||||||||||||||||  |  || ||| |||||||||||||| || ||||||| ||||||| ||||||| ||||||    
T  11298015 agataaattgcaaaataatccctgaacatagactctgttagtcaatttagtctctgaatgcagactccattagtcaatttagt 11298097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 11298084 - 11298162
Alignment:
Q  133 ttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaag 211  Q
    |||||||||||| | ||||||||||||||| |||| ||| |||| || || |||||||| |||||||||| ||||||||    
T  11298084 ttagtcaatttagttcctgaatgtagactctgttaatcactttaatctttaaaattgactaacaaagtcttcattcaag 11298162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 19564831 - 19564898
Alignment:
Q  184 aaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtga 251  Q
    |||||||| ||| |||| |||||||||  ||||||||||||||| ||  |||||||||||||||||||    
T  19564831 aaattgactaacgaagtttacattcaaaaactattttgcaatttatctccattcaaggactaaagtga 19564898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 12895609 - 12895666
Alignment:
Q  121 atgtaaactttgttagtcaatttaatccctgaatgtagactccgttagtcattttagt 178  Q
    ||||| |||||||||||||||||||||| | |||| |||||| |||||||| ||||||    
T  12895609 atgtagactttgttagtcaatttaatccttaaatgcagactctgttagtcaatttagt 12895666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 30100842 - 30100745
Alignment:
Q  88 ctgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    ||||||| ||||||||||||||||| ||| |  ||| | ||| ||||| ||| |||| |||||||||| ||||||| ||||||| | |||||| ||||    
T  30100842 ctgaatgtagataaattgcaaaatagtccatgaatgcagactctgttaatcactttagtccctgaatgcagactccattagtcaatatagtccctgaa 30100745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 30100614 - 30100690
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatcc 116  Q
    ||||||||||||||||| ||| |  |||| |||| ||||||| |||| || |||||||| ||||||||||| |||||    
T  30100614 attagtcactttagtccctaagtgagaaaagagtagtcactttaatccctaaatgcagagaaattgcaaaacaatcc 30100690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 229
Target Start/End: Complemental strand, 32539427 - 32539326
Alignment:
Q  127 actttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatt 226  Q
    |||| ||||||||||||| | | ||||||||||||  |||||||| |||||||| |||||||||  || | | ||||||||||   ||| ||||||||||    
T  32539427 acttcgttagtcaatttagttcttgaatgtagactatgttagtcactttagtcc-tgaaattgattaatatactctacattcagagactgttttgcaatt 32539329  T
Q  227 tct 229  Q
    |||    
T  32539328 tct 32539326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 185
Target Start/End: Original strand, 17497052 - 17497140
Alignment:
Q  97 gataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||||||||||||| ||| |  |||||  || |||||||||||||| ||| |||||| ||| || |||||| | |||||||| ||||    
T  17497052 gataaattgcaaaatagtccgtgaatgtagtctctgttagtcaatttagtccttgaatgcagattctgttagttaatttagtccctgaa 17497140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 21211658 - 21211606
Alignment:
Q  60 aataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaata 112  Q
    ||||||||| | || ||||||| | || |||||||||||||||||||||||||    
T  21211658 aataggaaaggggtggtcactttagtccctgaatgcagataaattgcaaaata 21211606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 248
Target Start/End: Original strand, 11601 - 11811
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtt 134  Q
    |||||||||||||||||||||  | ||||||||||||||||| | || | || || ||||||||||||||| |||||| |||||  ||||| ||| ||||    
T  11601 gggagattagtcactttagtcactgaataggaaatgagtcgttattttagtc-ctaaatgcagataaattgtaaaatagtccctgaatgtagactatgtt 11699  T
Q  135 agtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatca 234  Q
    || |||||||||| ||||||||| | || |||||||| |||||||| | |||||||| || | |||||  ||| ||| ||||||||||||||||||  ||    
T  11700 aggcaatttaatctctgaatgtatattctgttagtcactttagtccctaaaattgactaagagagtct--atttaaggactattttgcaatttctctgca 11797  T
Q  235 ttcaaggactaaag 248  Q
    |||| |||||||||    
T  11798 ttcagggactaaag 11811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 65; Significance: 1e-28; HSPs: 4)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 127 - 251
Target Start/End: Complemental strand, 995 - 872
Alignment:
Q  127 actttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatt 226  Q
    |||| ||||||||||||||||||||||||||||||  |||||||| |||||||| |||||||||| || | ||||||||||| || ||| ||||||||||    
T  995 acttcgttagtcaatttaatccctgaatgtagactttgttagtcactttagtccctgaaattgactaatagagtctacattc-aggactgttttgcaatt 897  T
Q  227 tctcatcattcaaggactaaagtga 251  Q
    ||||  |||||| ||||||||||||    
T  896 tctctgcattcagggactaaagtga 872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 127 - 251
Target Start/End: Complemental strand, 7459 - 7336
Alignment:
Q  127 actttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatt 226  Q
    |||| ||||||||||||||||||||||||||||||  |||||||| |||||||| |||||||||| || | ||||||||||| || ||| ||||||||||    
T  7459 acttcgttagtcaatttaatccctgaatgtagactttgttagtcactttagtccctgaaattgactaatagagtctacattc-aggactgttttgcaatt 7361  T
Q  227 tctcatcattcaaggactaaagtga 251  Q
    ||||  |||||| ||||||||||||    
T  7360 tctctgcattcagggactaaagtga 7336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 1022 - 969
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    ||||||||||||| |||||||||| ||||| ||||||||| |||| ||| ||||    
T  1022 gttagtcaatttagtccctgaatgcagacttcgttagtcaatttaatccctgaa 969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 7486 - 7433
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    ||||||||||||| |||||||||| ||||| ||||||||| |||| ||| ||||    
T  7486 gttagtcaatttagtccctgaatgcagacttcgttagtcaatttaatccctgaa 7433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 185
Target Start/End: Original strand, 23885 - 24037
Alignment:
Q  33 aagggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttg 132  Q
    |||||||||||||||||||||| | |||||||||||||||||||| ||| | ||  |||||  ||||||||||||||||  ||||   ||||| |||  |    
T  23885 aagggagattagtcactttagttcctaaataggaaatgagtcgtccctttagtccttgaatatagataaattgcaaaatggtccccgaatgtagactacg 23984  T
Q  133 ttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||||||||| |||||||||| |||||| ||| |||| |||||||||||||    
T  23985 ttagtcaatttagtccctgaatgcagactctgttggtcaatttagtccttgaa 24037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 247
Target Start/End: Original strand, 24015 - 24131
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    |||| ||||||||| ||| ||||||||||||   || |||| ||| |||| ||||||||||||||| | |||||||||| | | | ||||||||||||||    
T  24015 tgttggtcaatttagtccttgaatgtagactttattcgtcacttttgtccatgaaattgaccaacagaatctacattcagggattgttttgcaatttctc 24114  T
Q  231 atcattcaaggactaaa 247  Q
      |||||| ||||||||    
T  24115 tgcattcagggactaaa 24131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 179
Target Start/End: Original strand, 15362 - 15504
Alignment:
Q  37 gagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttag 136  Q
    |||||||||||||||||||  | |||  ||||||||| ||||||| | ||  ||||||||||||||||| |||||| || ||  ||||| ||| ||||||    
T  15362 gagattagtcactttagtctttgaattagaaatgagttgtcactttagtccttgaatgcagataaattgtaaaatagtctctgaatgtagactctgttag 15461  T
Q  137 tcaatttaatccctgaatgtagactccgttagtcattttagtc 179  Q
    ||||||||||| |||||||||||||||||||| || |||||||    
T  15462 tcaatttaatctctgaatgtagactccgttagccaatttagtc 15504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 15468 - 15401
Alignment:
Q  184 aaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcattcaaggactaaagtga 251  Q
    |||||||| |||| ||||||||||||   |||||||| |||||| ||  |||||||||||||||||||    
T  15468 aaattgactaacagagtctacattcagagactattttacaatttatctgcattcaaggactaaagtga 15401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 15489 - 15557
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagt 200  Q
    ||||| ||||||| || ||||||||||| || || |||| ||||||| | |||||||||| ||||||||    
T  15489 gttagccaatttagtctctgaatgtagattctgtcagtcgttttagtacctgaaattgactaacaaagt 15557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 251
Target Start/End: Complemental strand, 59855 - 59741
Alignment:
Q  137 tcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctcatcatt 236  Q
    |||||||| |||||||||| ||||||||||||||| |||||||| |||||||||| |||| |||||||||||| |  || ||||||||||||||  ||||    
T  59855 tcaatttagtccctgaatgcagactccgttagtcaatttagtccctgaaattgactaacagagtctacattcaggggctgttttgcaatttctctgcatt 59756  T
Q  237 caaggactaaagtga 251  Q
    || ||||||||||||    
T  59755 cagggactaaagtga 59741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 59711 - 59808
Alignment:
Q  46 cactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaattt 143  Q
    ||||||||||| | ||| ||||| | || ||||||| | || ||||||||||| ||||||||||| |  ||||  ||||| ||| |||||||||||||    
T  59711 cactttagtccctcaatgggaaaggtgtagtcactttagtccctgaatgcagagaaattgcaaaacagcccctgaatgtagactctgttagtcaattt 59808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 314126 - 314223
Alignment:
Q  88 ctgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    |||||||||||| |||||||||||| |||||| ||||| ||| |||||||||||||| |||||||||| ||||||||||||||| |||||||| ||||    
T  314126 ctgaatgcagattaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtccctgaatgcagactccgttagtcaatttagtccctgaa 314223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 314202 - 314277
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacatt 207  Q
    ||||||||||||| |||||||||||||| || |||||||| |||||||| ||||||| ||||||| ||||||||||    
T  314202 gttagtcaatttagtccctgaatgtagagtctgttagtcactttagtccctgaaattaaccaacagagtctacatt 314277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: scaffold1300
Description:

Target: scaffold1300; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 127 - 251
Target Start/End: Original strand, 1469 - 1593
Alignment:
Q  127 actttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatt 226  Q
    |||| |||||| |||||| |||||||||||||||||  |||||||  ||| |||||||||||||| |||| ||||||| |||||| ||| ||||||||||    
T  1469 acttcgttagttaatttagtccctgaatgtagactcaattagtcacattaatccttgaaattgactaacagagtctacgttcaaggactgttttgcaatt 1568  T
Q  227 tctcatcattcaaggactaaagtga 251  Q
    ||||  |||||||||||| ||||||    
T  1569 tctctgcattcaaggacttaagtga 1593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 1357 - 1429
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaata 112  Q
    ||||||||||||||||| | |||||||||| | |  |||||| | || || ||||||||||||||||||||||    
T  1357 attagtcactttagtccttgaataggaaataaattatcactttagtccctaaatgcagataaattgcaaaata 1429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 143
Target Start/End: Complemental strand, 1630 - 1526
Alignment:
Q  39 gattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtc 138  Q
    |||||||||||||||| | | |||  |||| |||| ||||||||| ||  |||||||||| ||||||||||| | ||| |  | ||| ||| ||||||||    
T  1630 gattagtcactttagttcctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtccttgaacgtagactctgttagtc 1531  T
Q  139 aattt 143  Q
    |||||    
T  1530 aattt 1526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 127 - 251
Target Start/End: Original strand, 127923 - 128047
Alignment:
Q  127 actttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatt 226  Q
    |||| |||| ||||||||||||| |||| ||||||| ||||||||  ||| |||||||||||||| |||| ||||||| |||||| ||| ||||||||||    
T  127923 acttcgttaatcaatttaatcccagaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaagcactgttttgcaatt 128022  T
Q  227 tctcatcattcaaggactaaagtga 251  Q
    ||||  |||||||| ||| ||||||    
T  128023 tctctgcattcaagtacttaagtga 128047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 35 - 229
Target Start/End: Original strand, 71904 - 72103
Alignment:
Q  35 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccct--atatgtaaactttg 132  Q
    ||||||||||| |||||||||| | | ||||| | | |||||||||| |||| ||||||||||||||||||||||||| |||||  ||||  | |  |||    
T  71904 gggagattagtgactttagtcc-tgagtaggataggggtcgtcactttaatccctgaatgcagataaattgcaaaatagtccctgaatatagataaattg 72002  T
Q  133 t----tagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttc 228  Q
         ||||||||||| |||||||||| | |||  |||||||| |||||||| |||||||||||| |||| |||||||||| | ||| ||||||||||||    
T  72003 caaaatagtcaatttagtccctgaatgcaaactttgttagtcaatttagtccctgaaattgaccatcaaaatctacattcagggactgttttgcaatttc 72102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 230
Target Start/End: Complemental strand, 27644 - 27546
Alignment:
Q  132 gttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    ||||||||||||| | |||||||||||||| |||| |||| |||||||||||||||||||||||| |||||||||| |   ||| ||||||||||||||    
T  27644 gttagtcaatttacttcctgaatgtagacttcgttcgtcactttagtccttgaaattgaccaacagagtctacattaagagactgttttgcaatttctc 27546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 27755 - 27683
Alignment:
Q  40 attagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaata 112  Q
    ||||||||||| ||||| | | |||||||  ||||||||||| | ||  |||||||| |||||||||||||||    
T  27755 attagtcacttaagtccctgattaggaaagtagtcgtcactttagtctatgaatgcaaataaattgcaaaata 27683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 251
Target Start/End: Original strand, 57568 - 57692
Alignment:
Q  127 actttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatt 226  Q
    |||| |||| |||||||| ||||||||| ||||||| ||||||||  ||| |||||||||||||| |||| ||||||| |||||| ||| ||||||||||    
T  57568 acttcgttaatcaatttagtccctgaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaagcactgttttgcaatt 57667  T
Q  227 tctcatcattcaaggactaaagtga 251  Q
    ||||  |||| ||| ||| ||||||    
T  57668 tctctgcattaaagtacttaagtga 57692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 57498 - 57594
Alignment:
Q  89 tgaatgcagataaattgcaaaataatccctatatgtaaactttgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaa 185  Q
    ||||||||||||||||| |||||| |  ||  ||||| ||| |||||||||| ||| |  ||||||| ||||| ||||| ||| |||||||| ||||    
T  57498 tgaatgcagataaattgaaaaatagtttctgaatgtatactatgttagtcaacttagtatctgaatgcagacttcgttaatcaatttagtccctgaa 57594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 247
Target Start/End: Complemental strand, 190334 - 190218
Alignment:
Q  131 tgttagtcaatttaatccctgaatgtagactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaagtactattttgcaatttctc 230  Q
    |||||||||||||| ||||| |||||| |||  |||| ||| |||| ||| ||||||||||||||| ||||||||||||   ||| ||||||||||||||    
T  190334 tgttagtcaatttagtccctaaatgtaaactatgttaatcaatttaatccctgaaattgaccaacagagtctacattcagagactgttttgcaatttctc 190235  T
Q  231 atcattcaaggactaaa 247  Q
      ||||||  |||||||    
T  190234 tgcattcagagactaaa 190218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 180
Target Start/End: Complemental strand, 190460 - 190317
Alignment:
Q  36 ggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatcactgaatgcagataaattgcaaaataatccctatatgtaaactttgtta 135  Q
    |||||||||||| |||||| | | ||||| ||| || ||||  ||| |||| ||||||| ||||||||||||||||| |  ||| ||  | |||||||||    
T  190460 ggagattagtca-tttagttcctgaatagaaaaagaatcgttcctttaatccctgaatgtagataaattgcaaaatagtttctaaatacagactttgtta 190362  T
Q  136 gtcaatttaatccctgaatgtagactccgttagtcattttagtcc 180  Q
    ||||||||| | |||||||  |||||| |||||||| ||||||||    
T  190361 gtcaatttagttcctgaatacagactctgttagtcaatttagtcc 190317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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