View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1269_low_21 (Length: 252)
Name: NF1269_low_21
Description: NF1269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1269_low_21 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 30 - 252
Target Start/End: Complemental strand, 36151513 - 36151291
Alignment:
| Q |
30 |
cacccaatattttcctacaaaattgagagatctaacggttgtactggttcgtgatatattggctatttgtgtaagatttatatatatattttgcagtatg |
129 |
Q |
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| T |
36151513 |
cacccaatattttcctacaaaatcgagagatctaacggttgtactggttcatgatatattggctatttgtgtaagatttatatatatattttgcagtatg |
36151414 |
T |
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| Q |
130 |
aatttggtgcaacatgccagcaagtgggccatactgttggtgtcggtggttaattggctttgagcattgataaggaaacgatgattggcatttggaaagc |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36151413 |
aatttggtgcaacatgccagcaagtgggccatactgttggtgtcggtggttaattggctttgagcattgataaggaaacgatgattggcatttggaaagc |
36151314 |
T |
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| Q |
230 |
atacaaagtcaaacattcaacac |
252 |
Q |
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||||||||||||||||||||||| |
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| T |
36151313 |
atacaaagtcaaacattcaacac |
36151291 |
T |
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