View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12700_low_11 (Length: 396)

Name: NF12700_low_11
Description: NF12700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12700_low_11
NF12700_low_11
[»] chr1 (50 HSPs)
chr1 (157-382)||(30291450-30291683)
chr1 (1-59)||(30293000-30293058)
chr1 (1-47)||(50921432-50921478)
chr1 (1-49)||(23281351-23281399)
chr1 (1-49)||(25088013-25088061)
chr1 (1-49)||(33753222-33753270)
chr1 (1-48)||(9881550-9881597)
chr1 (1-48)||(16268030-16268077)
chr1 (1-47)||(52412597-52412643)
chr1 (4-49)||(14118527-14118572)
chr1 (4-49)||(45305753-45305798)
chr1 (1-46)||(51691874-51691919)
chr1 (5-49)||(28112718-28112762)
chr1 (4-48)||(34028719-34028763)
chr1 (4-48)||(34029065-34029109)
chr1 (3-46)||(14776078-14776121)
chr1 (4-47)||(34279585-34279628)
chr1 (4-47)||(52412942-52412985)
chr1 (4-46)||(24590569-24590611)
chr1 (1-47)||(28970418-28970464)
chr1 (1-43)||(29256835-29256877)
chr1 (1-43)||(30293353-30293395)
chr1 (4-50)||(36077267-36077313)
chr1 (1-42)||(2125543-2125584)
chr1 (3-48)||(25088358-25088403)
chr1 (1-46)||(34279240-34279285)
chr1 (4-45)||(50921061-50921102)
chr1 (1-45)||(16267716-16267760)
chr1 (5-49)||(18794038-18794082)
chr1 (4-48)||(19986466-19986510)
chr1 (1-49)||(24655927-24655975)
chr1 (1-48)||(4550941-4550988)
chr1 (1-36)||(10654370-10654405)
chr1 (1-44)||(18793693-18793736)
chr1 (3-46)||(22584695-22584738)
chr1 (1-44)||(31125938-31125981)
chr1 (1-48)||(32564290-32564337)
chr1 (1-44)||(35986234-35986277)
chr1 (4-50)||(1831660-1831706)
chr1 (6-48)||(10654028-10654070)
chr1 (1-43)||(10923365-10923407)
chr1 (1-47)||(10923704-10923750)
chr1 (1-35)||(50118358-50118392)
chr1 (1-35)||(51810479-51810513)
chr1 (7-44)||(11395007-11395044)
chr1 (4-49)||(37199265-37199310)
chr1 (3-36)||(50574860-50574893)
chr1 (3-44)||(51692213-51692254)
chr1 (1-45)||(11797147-11797191)
chr1 (11-47)||(32563958-32563994)
[»] scaffold0045 (2 HSPs)
scaffold0045 (3-44)||(66082-66123)
scaffold0045 (3-44)||(73414-73455)
[»] chr7 (25 HSPs)
chr7 (3-48)||(10625104-10625149)
chr7 (1-49)||(35085736-35085784)
chr7 (1-47)||(31715962-31716008)
chr7 (5-49)||(32706729-32706773)
chr7 (4-47)||(10625428-10625471)
chr7 (3-50)||(23472589-23472636)
chr7 (4-47)||(47250890-47250933)
chr7 (1-47)||(473191-473237)
chr7 (1-47)||(35086081-35086127)
chr7 (1-50)||(9225631-9225679)
chr7 (1-46)||(18731019-18731064)
chr7 (1-50)||(23437148-23437197)
chr7 (1-46)||(23472897-23472942)
chr7 (1-46)||(44486273-44486318)
chr7 (5-49)||(8769279-8769323)
chr7 (1-45)||(48704149-48704193)
chr7 (1-44)||(8769623-8769666)
chr7 (1-48)||(9034656-9034703)
chr7 (4-47)||(24119713-24119756)
chr7 (1-48)||(31715631-31715678)
chr7 (5-48)||(43726587-43726630)
chr7 (5-47)||(47251241-47251283)
chr7 (1-46)||(11679043-11679088)
chr7 (13-49)||(38677095-38677131)
chr7 (3-35)||(39118021-39118053)
[»] chr5 (46 HSPs)
chr5 (1-50)||(35263490-35263539)
chr5 (1-48)||(7399075-7399122)
chr5 (1-47)||(29023936-29023982)
chr5 (4-49)||(19204941-19204986)
chr5 (1-45)||(8418525-8418569)
chr5 (1-48)||(5088469-5088516)
chr5 (1-48)||(12593454-12593501)
chr5 (1-48)||(36752242-36752289)
chr5 (1-47)||(10656093-10656139)
chr5 (1-43)||(15476269-15476311)
chr5 (3-49)||(21750807-21750853)
chr5 (3-49)||(40589397-40589443)
chr5 (3-49)||(40590000-40590046)
chr5 (1-46)||(10656435-10656480)
chr5 (4-49)||(18514285-18514330)
chr5 (1-46)||(28392111-28392156)
chr5 (3-48)||(33699273-33699318)
chr5 (1-46)||(42710691-42710736)
chr5 (1-45)||(7210786-7210830)
chr5 (1-48)||(16353495-16353542)
chr5 (7-46)||(40589054-40589093)
chr5 (7-46)||(40589657-40589696)
chr5 (1-47)||(3878480-3878526)
chr5 (5-47)||(3879357-3879399)
chr5 (1-35)||(5087818-5087852)
chr5 (1-43)||(19205284-19205326)
chr5 (1-35)||(26289031-26289065)
chr5 (5-47)||(35263839-35263881)
chr5 (1-47)||(38416475-38416521)
chr5 (4-49)||(12695030-12695075)
chr5 (1-34)||(31656370-31656403)
chr5 (1-46)||(31656699-31656744)
chr5 (1-46)||(33763249-33763293)
chr5 (5-42)||(39706396-39706433)
chr5 (13-49)||(2596385-2596421)
chr5 (3-35)||(5624390-5624422)
chr5 (3-43)||(9693261-9693301)
chr5 (5-49)||(12593801-12593845)
chr5 (3-35)||(15670494-15670526)
chr5 (3-46)||(16353151-16353197)
chr5 (1-33)||(17736588-17736620)
chr5 (4-48)||(19615420-19615464)
chr5 (5-49)||(26288988-26289032)
chr5 (3-43)||(31909273-31909313)
chr5 (1-49)||(38416140-38416188)
chr5 (5-45)||(40774339-40774379)
[»] scaffold0809 (1 HSPs)
scaffold0809 (1-49)||(4659-4707)
[»] chr3 (54 HSPs)
chr3 (4-48)||(9028189-9028233)
chr3 (3-47)||(41997818-41997862)
chr3 (1-48)||(4846937-4846984)
chr3 (1-47)||(28688331-28688377)
chr3 (1-47)||(45871696-45871742)
chr3 (1-46)||(8846417-8846462)
chr3 (1-46)||(54107669-54107714)
chr3 (4-48)||(12123088-12123132)
chr3 (1-49)||(26332664-26332711)
chr3 (1-44)||(7937645-7937688)
chr3 (1-48)||(12123420-12123467)
chr3 (1-48)||(31514203-31514250)
chr3 (1-48)||(34521264-34521311)
chr3 (1-48)||(35753772-35753819)
chr3 (1-48)||(41208741-41208788)
chr3 (3-46)||(44069123-44069166)
chr3 (1-47)||(7274652-7274698)
chr3 (4-50)||(15862519-15862565)
chr3 (1-47)||(26332318-26332364)
chr3 (4-46)||(27940272-27940314)
chr3 (1-43)||(34521598-34521640)
chr3 (1-43)||(40410715-40410757)
chr3 (1-47)||(44069464-44069510)
chr3 (5-46)||(8846076-8846117)
chr3 (1-46)||(31513863-31513908)
chr3 (1-46)||(33812884-33812929)
chr3 (4-49)||(41998158-41998203)
chr3 (1-50)||(51311859-51311908)
chr3 (1-46)||(52609703-52609748)
chr3 (1-48)||(7743106-7743154)
chr3 (3-43)||(35580292-35580332)
chr3 (1-41)||(35753408-35753448)
chr3 (1-49)||(41208398-41208446)
chr3 (1-49)||(43899415-43899463)
chr3 (1-45)||(45171408-45171452)
chr3 (3-46)||(43527023-43527066)
chr3 (4-46)||(7937907-7937949)
chr3 (3-45)||(19124515-19124556)
chr3 (5-43)||(33812727-33812765)
chr3 (1-51)||(50819558-50819608)
chr3 (1-51)||(50856256-50856306)
chr3 (5-47)||(54081629-54081671)
chr3 (1-47)||(54108461-54108507)
chr3 (2-35)||(14353389-14353422)
chr3 (1-46)||(15862182-15862227)
chr3 (3-44)||(51170724-51170765)
chr3 (1-49)||(14353043-14353091)
chr3 (3-35)||(21169677-21169709)
chr3 (3-43)||(34629985-34630025)
chr3 (3-47)||(44316626-44316670)
chr3 (3-35)||(45872032-45872064)
chr3 (1-49)||(50819217-50819265)
chr3 (1-49)||(50856599-50856647)
chr3 (3-47)||(52268446-52268490)
[»] chr8 (40 HSPs)
chr8 (2-49)||(24456994-24457041)
chr8 (1-47)||(24456733-24456779)
chr8 (3-49)||(29027311-29027357)
chr8 (5-46)||(31230958-31230999)
chr8 (1-50)||(37393818-37393867)
chr8 (1-46)||(40040162-40040207)
chr8 (5-48)||(30872781-30872824)
chr8 (4-47)||(31230612-31230655)
chr8 (1-48)||(35223772-35223819)
chr8 (4-43)||(39912263-39912302)
chr8 (1-43)||(26736128-26736170)
chr8 (5-47)||(44678316-44678358)
chr8 (1-50)||(11198546-11198595)
chr8 (3-48)||(35224110-35224155)
chr8 (4-45)||(39240031-39240072)
chr8 (1-46)||(40032426-40032471)
chr8 (3-47)||(3869292-3869336)
chr8 (4-48)||(6843493-6843537)
chr8 (3-47)||(11639378-11639422)
chr8 (5-49)||(18017787-18017831)
chr8 (5-44)||(119119-119158)
chr8 (1-36)||(5417154-5417189)
chr8 (1-48)||(7041965-7042012)
chr8 (1-43)||(758347-758389)
chr8 (4-50)||(758688-758734)
chr8 (1-35)||(1826132-1826166)
chr8 (1-35)||(1860577-1860611)
chr8 (1-43)||(6844781-6844823)
chr8 (5-43)||(16645893-16645931)
chr8 (1-51)||(21515541-21515591)
chr8 (1-46)||(119457-119502)
chr8 (3-48)||(5416810-5416855)
chr8 (1-46)||(18622088-18622133)
chr8 (1-46)||(18914592-18914637)
chr8 (1-50)||(23244856-23244905)
chr8 (3-48)||(37393475-37393520)
chr8 (3-47)||(8653935-8653979)
chr8 (1-41)||(14920752-14920792)
chr8 (3-43)||(39240362-39240402)
chr8 (13-49)||(40094828-40094864)
[»] chr4 (42 HSPs)
chr4 (4-47)||(48209947-48209990)
chr4 (1-47)||(21217846-21217892)
chr4 (1-47)||(54136090-54136136)
chr4 (4-45)||(11242808-11242849)
chr4 (1-46)||(18862782-18862827)
chr4 (1-46)||(33626205-33626250)
chr4 (1-46)||(44710403-44710448)
chr4 (1-46)||(45683117-45683162)
chr4 (1-49)||(38866395-38866443)
chr4 (4-47)||(9010849-9010892)
chr4 (1-48)||(32385152-32385199)
chr4 (4-47)||(46200483-46200526)
chr4 (1-48)||(52914950-52914997)
chr4 (1-46)||(1205718-1205763)
chr4 (5-46)||(10014465-10014506)
chr4 (5-46)||(10017815-10017856)
chr4 (5-46)||(10021606-10021647)
chr4 (1-46)||(21218188-21218233)
chr4 (1-46)||(32384653-32384698)
chr4 (1-42)||(33625868-33625909)
chr4 (1-42)||(33882290-33882331)
chr4 (1-46)||(34958832-34958877)
chr4 (1-46)||(46200826-46200871)
chr4 (1-46)||(46535523-46535568)
chr4 (4-48)||(9010503-9010547)
chr4 (3-43)||(24504283-24504323)
chr4 (1-49)||(25058830-25058878)
chr4 (3-43)||(46621270-46621310)
chr4 (1-44)||(29864516-29864559)
chr4 (1-48)||(43317220-43317267)
chr4 (1-43)||(1205381-1205423)
chr4 (1-43)||(25218087-25218129)
chr4 (1-47)||(29864175-29864221)
chr4 (1-43)||(29970196-29970238)
chr4 (3-48)||(10014806-10014851)
chr4 (3-48)||(10021947-10021992)
chr4 (3-44)||(29970516-29970556)
chr4 (1-46)||(40067689-40067734)
chr4 (5-42)||(46620931-46620968)
chr4 (1-45)||(21051360-21051404)
chr4 (1-49)||(43316877-43316924)
chr4 (5-45)||(46535867-46535907)
[»] scaffold0168 (2 HSPs)
scaffold0168 (1-51)||(11828-11878)
scaffold0168 (1-49)||(11485-11533)
[»] chr2 (57 HSPs)
chr2 (1-47)||(16736100-16736146)
chr2 (1-47)||(31450665-31450711)
chr2 (1-46)||(4104159-4104204)
chr2 (1-45)||(12303786-12303830)
chr2 (3-47)||(27476710-27476754)
chr2 (4-44)||(37744451-37744491)
chr2 (3-47)||(40694194-40694238)
chr2 (5-48)||(17856534-17856577)
chr2 (1-48)||(18565064-18565111)
chr2 (1-48)||(39150166-39150213)
chr2 (1-44)||(43183585-43183628)
chr2 (1-47)||(5961668-5961714)
chr2 (1-51)||(13354518-13354568)
chr2 (1-47)||(16261211-16261257)
chr2 (1-43)||(18565344-18565386)
chr2 (1-47)||(28203201-28203247)
chr2 (4-46)||(41377698-41377740)
chr2 (1-46)||(4104500-4104545)
chr2 (1-46)||(4120764-4120809)
chr2 (6-47)||(15137150-15137191)
chr2 (1-46)||(20908852-20908897)
chr2 (1-46)||(28202860-28202905)
chr2 (1-42)||(28631278-28631319)
chr2 (1-46)||(32933932-32933977)
chr2 (1-46)||(36211740-36211785)
chr2 (3-43)||(4121106-4121146)
chr2 (1-45)||(16260872-16260916)
chr2 (4-48)||(32933589-32933633)
chr2 (4-48)||(39454449-39454493)
chr2 (1-49)||(44610859-44610907)
chr2 (1-36)||(12304126-12304161)
chr2 (1-48)||(12304495-12304542)
chr2 (3-46)||(20297410-20297453)
chr2 (1-48)||(27132509-27132556)
chr2 (7-46)||(27132857-27132896)
chr2 (3-46)||(31451009-31451052)
chr2 (1-44)||(37412595-37412638)
chr2 (1-48)||(43183924-43183971)
chr2 (1-47)||(13354176-13354222)
chr2 (1-47)||(20908510-20908556)
chr2 (1-47)||(25642609-25642655)
chr2 (1-35)||(39912638-39912672)
chr2 (4-49)||(39912971-39913017)
chr2 (1-47)||(41377354-41377399)
chr2 (1-46)||(10833376-10833421)
chr2 (3-48)||(14877481-14877526)
chr2 (3-48)||(16655949-16655994)
chr2 (1-46)||(17856199-17856244)
chr2 (4-49)||(21470292-21470337)
chr2 (1-42)||(34820283-34820324)
chr2 (4-45)||(38275801-38275842)
chr2 (7-48)||(45389129-45389170)
chr2 (1-41)||(21470635-21470675)
chr2 (1-49)||(34820620-34820668)
chr2 (5-45)||(36442479-36442519)
chr2 (2-46)||(37412920-37412964)
chr2 (1-49)||(39454774-39454822)
[»] chr6 (28 HSPs)
chr6 (1-48)||(3338475-3338522)
chr6 (3-46)||(24605216-24605259)
chr6 (1-47)||(3288929-3288975)
chr6 (1-43)||(24604878-24604920)
chr6 (1-47)||(35132600-35132646)
chr6 (1-46)||(1158588-1158633)
chr6 (1-46)||(9173901-9173946)
chr6 (3-47)||(11525108-11525152)
chr6 (3-43)||(13155842-13155882)
chr6 (3-43)||(13160698-13160738)
chr6 (5-43)||(13156179-13156217)
chr6 (5-43)||(13161035-13161073)
chr6 (3-49)||(19135789-19135835)
chr6 (5-47)||(25551346-25551388)
chr6 (5-47)||(33329205-33329247)
chr6 (1-47)||(33548198-33548244)
chr6 (5-43)||(33971931-33971969)
chr6 (1-46)||(3289251-3289296)
chr6 (1-46)||(24548241-24548286)
chr6 (14-51)||(32864427-32864464)
chr6 (4-49)||(33545166-33545211)
chr6 (1-49)||(1158930-1158978)
chr6 (10-46)||(1860835-1860871)
chr6 (3-47)||(3338818-3338862)
chr6 (1-45)||(6220397-6220441)
chr6 (1-45)||(11524706-11524750)
chr6 (1-33)||(11524778-11524810)
chr6 (13-49)||(33548124-33548160)
[»] scaffold0051 (1 HSPs)
scaffold0051 (5-46)||(40697-40738)
[»] scaffold1436 (1 HSPs)
scaffold1436 (2-48)||(1474-1520)
[»] scaffold0236 (1 HSPs)
scaffold0236 (1-47)||(11555-11601)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-46)||(45177-45222)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-46)||(90805-90850)
[»] scaffold0012 (1 HSPs)
scaffold0012 (4-48)||(177409-177453)


Alignment Details
Target: chr1 (Bit Score: 172; Significance: 3e-92; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 157 - 382
Target Start/End: Complemental strand, 30291683 - 30291450
Alignment:
Q  157 atgcttacagtattcgaatttcactaccactaaccttt---tgagtattttatctttaatgtgcattttgagtcgaatagcaaagtggtggttgacgcct 253  Q
    |||||||| |||||| ||||||||||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30291683 atgcttacggtattcaaatttcactaccactaacctttatttgagtatgttatctttaatgtgcattttgagtcgaatagcaaagtggtagttgacgcct 30291584  T
Q  254 tcaatgatttgagatcatttgataatgagctagtcttaactatatcacaa-----tattgtgctattctacccactcatgatgataaataatcaacttac 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||    
T  30291583 tcaatgatttgagatcatttgataatgagctagtcttaactatatcacaatactgtattgtgctattctacccactcatgatgataaataatcaacttac 30291484  T
Q  349 tttaatatggagacaagttaacagggttgtttat 382  Q
    ||||||||||||||| ||||  ||||||||||||    
T  30291483 tttaatatggagacaggttataagggttgtttat 30291450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 30293058 - 30293000
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaattggagggta 59  Q
    |||||||||||||||||||||||  ||||||||||| |||||| |||||||||||||||    
T  30293058 agcgatactacctaaatagttaatggaccaaaaatgcaatttaacctaattggagggta 30293000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 50921432 - 50921478
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  50921432 agcgatactacctaaatagttaagggaccaaaaatgtaatttagcct 50921478  T

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Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23281351 - 23281399
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  23281351 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcctaa 23281399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25088061 - 25088013
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  25088061 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcctaa 25088013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33753270 - 33753222
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  33753270 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcctaa 33753222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 9881597 - 9881550
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  9881597 agcgatactacctaaatagttaagggaccaaaaatgcaatttagccta 9881550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 16268030 - 16268077
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  16268030 agcgatactacctaaatagttaagggaccaaaaatgcaatttagccta 16268077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 52412643 - 52412597
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||    
T  52412643 agcgatactacctaaatagttaagggaccaaaaatgtattttagcct 52412597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 14118572 - 14118527
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  14118572 gatactacctaaatagttaagggaccaaaaatgcaatttagcctaa 14118527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 45305753 - 45305798
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  45305753 gatactacctaaatagttaagggaccaaaaatgcaatttagcctaa 45305798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 51691919 - 51691874
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||    
T  51691919 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcc 51691874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 28112762 - 28112718
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||    
T  28112762 atactacctaaatagttaagggaccaaaaatgcaatttagcctaa 28112718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 34028763 - 34028719
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  34028763 gatactacctaaatagttaagggaccaaaaatgcaatttagccta 34028719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 34029065 - 34029109
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  34029065 gatactacctaaatagttaagggaccaaaaatgcaatttagccta 34029109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 14776078 - 14776121
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  14776078 cgatactacctaaatagttaagtgaccaaaaatgcaatttagcc 14776121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 34279585 - 34279628
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||    
T  34279585 gatactacctaaatagttaagggaccaaaaatgcaatttagcct 34279628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 52412942 - 52412985
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||    
T  52412942 gataccacctaaatagttaagggaccaaaaatgtaatttagcct 52412985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 24590569 - 24590611
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  24590569 gatactacctaaatagttaagggaccaaaaatataatttagcc 24590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28970464 - 28970418
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||    
T  28970464 agcgatactacctaaatagttaaaggaccaaaaatgcaatttagcct 28970418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29256877 - 29256835
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  29256877 agcgatactacctaaatagttaagggaccaaaaatataattta 29256835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 30293353 - 30293395
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  30293353 agcgatactacctaaatagttaagggaccaaaaatgcaattta 30293395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 36077313 - 36077267
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcctaat 50  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  36077313 gatactacctaaataattaagggaccaaaaatgcaatttagcctaat 36077267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2125543 - 2125584
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaattt 42  Q
    |||||||||||||||||| ||||| |||||||||||||||||    
T  2125543 agcgatactacctaaataattaagggaccaaaaatgtaattt 2125584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 25088358 - 25088403
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||||    
T  25088358 cgatactacctaaatagttaagggaccaaaaatataatttaaccta 25088403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 34279285 - 34279240
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||||    
T  34279285 agcgttactacctaaatagttaagagaccaaaaatgcaatttagcc 34279240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 50921102 - 50921061
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagc 45  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  50921102 gatactacctaaatagttaagggaccaaaaatgcaatttagc 50921061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16267760 - 16267716
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagc 45  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||    
T  16267760 agcgatattacctaaatagttaagggaccaaaaatgcaatttagc 16267716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 18794038 - 18794082
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||||    
T  18794038 atactacttaaatagttaagggaccaaaaatgcaatttagcctaa 18794082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 19986466 - 19986510
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||||    
T  19986466 gatactacctaaatagttaagggaccaaaaatgcaatttatccta 19986510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24655927 - 24655975
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    ||||||||||| |||||||||||| ||| ||||||| ||||||||||||    
T  24655927 agcgatactacttaaatagttaagagactaaaaatgcaatttagcctaa 24655975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4550941 - 4550988
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    ||||||||||  |||||||||||| ||||||||||| |||||||||||    
T  4550941 agcgatactaattaaatagttaagagaccaaaaatgcaatttagccta 4550988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 10654370 - 10654405
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatg 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  10654370 agcgatactacctaaatagttaagggaccaaaaatg 10654405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18793736 - 18793693
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttag 44  Q
    |||||||||||||||||| ||||| ||||||||||| |||||||    
T  18793736 agcgatactacctaaataattaagggaccaaaaatgaaatttag 18793693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 22584695 - 22584738
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    ||||||||||||| |||||||| |||||||||| ||||||||||    
T  22584695 cgatactacctaattagttaagggaccaaaaatataatttagcc 22584738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31125981 - 31125938
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttag 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  31125981 agcgatactacctaaatagttaagggatcaaaaatgcaatttag 31125938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 32564290 - 32564337
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||||  ||| ||||||| |||||||||||    
T  32564290 agcgatactacctaaatagttaaaggactaaaaatgcaatttagccta 32564337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35986277 - 35986234
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttag 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  35986277 agcgatactacctaaatagttaagggaacaaaaatgcaatttag 35986234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 1831706 - 1831660
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcctaat 50  Q
    ||||||||||||||||||||| |||| |||||  |||||||||||||    
T  1831706 gatactacctaaatagttaagagaccgaaaattcaatttagcctaat 1831660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 10654070 - 10654028
Alignment:
Q  6 tactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||    
T  10654070 tactacctaaataattaagggaccaaaaatgcaatttagccta 10654028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10923407 - 10923365
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  10923407 agcgatactacctaaataattaagggaccaaaaatataattta 10923365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10923704 - 10923750
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||| || |||||||||||| ||||||||||| ||||||||||    
T  10923704 agcgataccacttaaatagttaagggaccaaaaatgcaatttagcct 10923750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 50118392 - 50118358
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaat 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  50118392 agcgatactacctaaatagttaagggaccaaaaat 50118358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 51810479 - 51810513
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaat 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  51810479 agcgatactacctaaatagttaagggaccaaaaat 51810513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 11395007 - 11395044
Alignment:
Q  7 actacctaaatagttaagcgaccaaaaatgtaatttag 44  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  11395007 actacctaaatagttaagggaccaaaaatgcaatttag 11395044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 37199265 - 37199310
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||||||||||||  |||||||||| |||||| |||||    
T  37199265 gatactacctaaatagttaaggaaccaaaaatgcaatttaacctaa 37199310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 50574860 - 50574893
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatg 36  Q
    |||||||||||||||||||||| |||||||||||    
T  50574860 cgatactacctaaatagttaagggaccaaaaatg 50574893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 51692213 - 51692254
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttag 44  Q
    ||||| |||||||||||||||| ||||||||||| |||||||    
T  51692213 cgatattacctaaatagttaagggaccaaaaatgcaatttag 51692254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11797191 - 11797147
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagc 45  Q
    |||||||||||||||||| ||||  ||||||||||| ||||||||    
T  11797191 agcgatactacctaaataattaaaggaccaaaaatgcaatttagc 11797147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 32563994 - 32563958
Alignment:
Q  11 cctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  32563994 cctaaatagttaagggaccaaaaatgcaatttagcct 32563958  T

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Target: scaffold0045 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 66082 - 66123
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttag 44  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  66082 cgatactacctaaatagttaagcgaccaaaaatgtaatttag 66123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 73414 - 73455
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttag 44  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  73414 cgatactacctaaatagttaagcgaccaaaaatgtaatttag 73455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 10625149 - 10625104
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  10625149 cgatactacctaaatagttaagggaccaaaaatgtaatttagccta 10625104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35085784 - 35085736
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  35085784 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcctaa 35085736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 31715962 - 31716008
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  31715962 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcct 31716008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 32706773 - 32706729
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||    
T  32706773 atactacctaaatagttaagggaccaaaaatgcaatttagcctaa 32706729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 10625428 - 10625471
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||    
T  10625428 gatactacctaaatagttaagggaccaaaaatgcaatttagcct 10625471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 23472636 - 23472589
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaat 50  Q
    |||||||||||||||||||||| ||||||||||  |||||||||||||    
T  23472636 cgatactacctaaatagttaagggaccaaaaatacaatttagcctaat 23472589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 47250890 - 47250933
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||    
T  47250890 gatactacctaaatagttaagggaccaaaaatgcaatttagcct 47250933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 473237 - 473191
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    ||||||||| ||||||||||||||||| |||||||| ||||||||||    
T  473237 agcgatactgcctaaatagttaagcgatcaaaaatgcaatttagcct 473191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 35086081 - 35086127
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||    
T  35086081 agcgatactacctaaatagttaaaggaccaaaaatgcaatttagcct 35086127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9225679 - 9225631
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaat 50  Q
    |||||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  9225679 agcgatactacctaaata-ttaagagaccaaaaatgcaatttagcctaat 9225631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 18731064 - 18731019
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||| ||||||||||||| ||||||||||| |||||||||    
T  18731064 agcgatactatctaaatagttaagggaccaaaaatgcaatttagcc 18731019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23437197 - 23437148
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaat 50  Q
    ||||||||||||||||||||||||  | |||||||| |||||||||||||    
T  23437197 agcgatactacctaaatagttaaggaatcaaaaatgcaatttagcctaat 23437148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23472897 - 23472942
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    ||||| |||||||||||||||||| ||||||||||| |||||||||    
T  23472897 agcgaaactacctaaatagttaagggaccaaaaatgcaatttagcc 23472942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 44486273 - 44486318
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||    
T  44486273 agcgatactacctaaatagttaaaggaccaaaaatgcaatttagcc 44486318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 8769323 - 8769279
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||||||||||| ||||||||||| |||||| |||||    
T  8769323 atactacctaaatagttaagggaccaaaaatgcaatttaacctaa 8769279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 48704149 - 48704193
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagc 45  Q
    |||||||||||||||||||||||| |||||||||| | |||||||    
T  48704149 agcgatactacctaaatagttaagggaccaaaaatatcatttagc 48704193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8769623 - 8769666
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttag 44  Q
    |||||||||||||||||||||||| ||| ||||||| |||||||    
T  8769623 agcgatactacctaaatagttaagggactaaaaatgcaatttag 8769666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 9034656 - 9034703
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||||  ||||||||||  |||||||||||    
T  9034656 agcgatactacctaaatagttaaaggaccaaaaatacaatttagccta 9034703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 24119756 - 24119713
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    ||||||| |||||||||||||  |||||||||||||||||||||    
T  24119756 gatactatctaaatagttaagaaaccaaaaatgtaatttagcct 24119713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31715678 - 31715631
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||||| ||| ||||||  |||||||||||    
T  31715678 agcgatactacctaaatagttaagagacaaaaaatacaatttagccta 31715631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 43726587 - 43726630
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||    
T  43726587 ataccacctaaatagttaagggaccaaaaatgcaatttagccta 43726630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 47251241 - 47251283
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||    
T  47251241 atactacctaaatagttaagggacaaaaaatgcaatttagcct 47251283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11679043 - 11679088
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    ||||||||||| |||||||||||| ||||||||||  |||||||||    
T  11679043 agcgatactacttaaatagttaagggaccaaaaatacaatttagcc 11679088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 38677095 - 38677131
Alignment:
Q  13 taaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  38677095 taaatagttaagggaccaaaaaggtaatttagcctaa 38677131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 39118053 - 39118021
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaat 35  Q
    |||||||||||||||||||||| ||||||||||    
T  39118053 cgatactacctaaatagttaagggaccaaaaat 39118021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 35263539 - 35263490
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaat 50  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  35263539 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcctaat 35263490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7399122 - 7399075
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  7399122 agcgatactacctaaatagttaagggaccaaaaatgcaatttagccta 7399075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29023982 - 29023936
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  29023982 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcct 29023936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 19204986 - 19204941
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  19204986 gatactacctaaatagttaagggaccaaaaatgcaatttagcctaa 19204941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8418525 - 8418569
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagc 45  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||    
T  8418525 agcgatactacctaaatagttaagggaccaaaaatgcaatttagc 8418569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 5088469 - 5088516
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||||    
T  5088469 agcgatactacctaaatagttaagagaccaaaaatacaatttagccta 5088516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12593501 - 12593454
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||    
T  12593501 agcgatactacctaaatagttaagggatcaaaaatgcaatttagccta 12593454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 36752242 - 36752289
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  36752242 agcgatactacataaatagttaagggaccaaaaatgcaatttagccta 36752289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10656139 - 10656093
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||    
T  10656139 agcgatactacctaaatagttaagggaccaaaaatacaatttagcct 10656093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15476311 - 15476269
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  15476311 agcgatactacctaaatagttaagggaccaaaaatataattta 15476269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 21750853 - 21750807
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||    
T  21750853 cgatactacctaaatagttaagggaccaaaaaggcaatttagcctaa 21750807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 40589397 - 40589443
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||    
T  40589397 cgatactacctaaatagttaaggaaccaaaaatgcaatttagcctaa 40589443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 40590000 - 40590046
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||    
T  40590000 cgatactacctaaatagttaaggaaccaaaaatgcaatttagcctaa 40590046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10656435 - 10656480
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| || |||||||| |||||||||    
T  10656435 agcgatactacctaaatagttaagggatcaaaaatgcaatttagcc 10656480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 18514330 - 18514285
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||| |||||||||||||| ||||||||||| ||||||||||||    
T  18514330 gatacttcctaaatagttaagggaccaaaaatgcaatttagcctaa 18514285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28392111 - 28392156
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||    
T  28392111 agcgatactacctaaatagttaagagaccaaaaatagaatttagcc 28392156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 33699318 - 33699273
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||| ||||| ||||| |||||||||||    
T  33699318 cgatactacctaaatagttaagggaccataaatgcaatttagccta 33699273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 42710691 - 42710736
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||    
T  42710691 agcgatactacctaaatagttaagggaccaaaaatacaatttagcc 42710736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7210786 - 7210830
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagc 45  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||    
T  7210786 agcgatactacctaaatagttaagtgaccaagaatgcaatttagc 7210830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 16353495 - 16353542
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    ||||||||||| |||||||||||| || |||||||| |||||||||||    
T  16353495 agcgatactacttaaatagttaagggatcaaaaatgcaatttagccta 16353542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 40589093 - 40589054
Alignment:
Q  7 actacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  40589093 actacctaaatagttaagggaccaaaaatgcaatttagcc 40589054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 40589696 - 40589657
Alignment:
Q  7 actacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  40589696 actacctaaatagttaagggaccaaaaatgcaatttagcc 40589657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3878526 - 3878480
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||| ||||| ||||||||||  ||||||||||    
T  3878526 agcgatactacctaaataattaagggaccaaaaatacaatttagcct 3878480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 3879357 - 3879399
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||    
T  3879357 atactacttaaatagttaagggaccaaaaatgcaatttagcct 3879399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 5087852 - 5087818
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaat 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  5087852 agcgatactacctaaatagttaagggaccaaaaat 5087818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19205284 - 19205326
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||||||| || |||||||| ||||||    
T  19205284 agcgatactacctaaatagttaagggatcaaaaatgcaattta 19205326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 26289065 - 26289031
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaat 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  26289065 agcgatactacctaaatagttaagggaccaaaaat 26289031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 35263839 - 35263881
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||| ||||| ||||||||||| ||||||||||    
T  35263839 atactacctaaataattaagggaccaaaaatgcaatttagcct 35263881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38416475 - 38416521
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||| ||||| ||||||||||  ||||||||||    
T  38416475 agcgatactacctaaataattaagagaccaaaaatacaatttagcct 38416521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 12695030 - 12695075
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    ||||||||||||||||||||| ||| ||||||| ||||| ||||||    
T  12695030 gatactacctaaatagttaagggactaaaaatgcaatttggcctaa 12695075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 31656403 - 31656370
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaa 34  Q
    |||||||||||||||||||||||| |||||||||    
T  31656403 agcgatactacctaaatagttaagggaccaaaaa 31656370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31656699 - 31656744
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    ||||||||| |||||  ||||||| |||||||||||||||||||||    
T  31656699 agcgatactgcctaataagttaagggaccaaaaatgtaatttagcc 31656744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33763249 - 33763293
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||||    
T  33763249 agcgatactac-taaatagttaagggaccaaaaatgcaatttagcc 33763293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 39706396 - 39706433
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaattt 42  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  39706396 atactacctaaatagttaagggaccaaaaatgcaattt 39706433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 2596421 - 2596385
Alignment:
Q  13 taaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  2596421 taaatagttaagggaccaaaaaggtaatttagcctaa 2596385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 5624422 - 5624390
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaat 35  Q
    |||||||||||||||||||||| ||||||||||    
T  5624422 cgatactacctaaatagttaagagaccaaaaat 5624390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 9693261 - 9693301
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    ||||||||||||||| |||||| ||||||||||| ||||||    
T  9693261 cgatactacctaaatcgttaagggaccaaaaatgcaattta 9693301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 12593801 - 12593845
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||||||||||  ||| |||||||||||||| |||||    
T  12593801 atactacctaaatagttaaaggactaaaaatgtaatttaacctaa 12593845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 15670494 - 15670526
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaat 35  Q
    |||||||||||||||||||||| ||||||||||    
T  15670494 cgatactacctaaatagttaagggaccaaaaat 15670526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 16353197 - 16353151
Alignment:
Q  3 cgatactacctaaatagt---taagcgaccaaaaatgtaatttagcc 46  Q
    ||||||||||||||||||   |||| |||||||||||||||||||||    
T  16353197 cgatactacctaaatagtagttaagggaccaaaaatgtaatttagcc 16353151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 17736588 - 17736620
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaa 33  Q
    |||||||||||||||||||||||| ||||||||    
T  17736588 agcgatactacctaaatagttaagggaccaaaa 17736620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 19615464 - 19615420
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    ||||||||||||||||| ||| ||||||||||| |||||| ||||    
T  19615464 gatactacctaaatagtcaagggaccaaaaatgcaatttaaccta 19615420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 26289032 - 26288988
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||| ||||||||||||||| ||||||||||  ||||||||||||    
T  26289032 atacaacctaaatagttaagggaccaaaaatacaatttagcctaa 26288988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 31909273 - 31909313
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||| ||||||| ||||||||||| ||||||    
T  31909273 cgatactacctaaacagttaagggaccaaaaatgcaattta 31909313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38416188 - 38416140
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||||||||| ||||| ||  ||||||| ||||||||||||    
T  38416188 agcgatactacctaaataattaagagattaaaaatgcaatttagcctaa 38416140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 40774379 - 40774339
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagc 45  Q
    |||||||||||||||||||| ||| ||||||| ||||||||    
T  40774379 atactacctaaatagttaagggacaaaaaatgaaatttagc 40774339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4659 - 4707
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  4659 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcctaa 4707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 9028233 - 9028189
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  9028233 gatactacctaaatagttaagggaccaaaaatgtaatttagccta 9028189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 41997862 - 41997818
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  41997862 cgatactacctaaatagttaagggaccaaaaatgtaatttagcct 41997818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4846937 - 4846984
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  4846937 agcgatactacctaaatagttaagggaccaaaaatgcaatttagccta 4846984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28688331 - 28688377
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  28688331 agcgatactacctaaatagttaagggacaaaaaatgtaatttagcct 28688377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 45871742 - 45871696
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  45871742 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcct 45871696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8846417 - 8846462
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||    
T  8846417 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcc 8846462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 54107714 - 54107669
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||    
T  54107714 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcc 54107669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 12123132 - 12123088
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  12123132 gatactacctaaatagttaagggaccaaaaatgcaatttagccta 12123088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26332664 - 26332711
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  26332664 agcgatactacctaaatagttaag-gaccaaaaatgcaatttagcctaa 26332711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7937688 - 7937645
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttag 44  Q
    ||||||||||||||||||||||||| |||||||||| |||||||    
T  7937688 agcgatactacctaaatagttaagcaaccaaaaatgcaatttag 7937645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12123420 - 12123467
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  12123420 agcgatactacctaaatagttaagggaccaaaaatgaaatttaaccta 12123467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 31514203 - 31514250
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  31514203 agcgatactacctaaatagttaagggactaaaaatgcaatttagccta 31514250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 34521311 - 34521264
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||| ||||| ||||||||||| |||||||||||    
T  34521311 agcgatactacctaaataattaagggaccaaaaatgcaatttagccta 34521264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 35753772 - 35753819
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    ||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  35753772 agcgatactacctaaatagttaaggtaccaaaaatgtaatttaaccta 35753819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 41208741 - 41208788
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  41208741 agcgatactacctaaatagttaagggactaaaaatgcaatttagccta 41208788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 44069166 - 44069123
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  44069166 cgatactacctaaatagttaagggaccaaaaatgcaatttagcc 44069123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7274698 - 7274652
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||||||    
T  7274698 agcgatactacctaaatatttaagggaccaaaaatgcaatttagcct 7274652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 15862519 - 15862565
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcctaat 50  Q
    ||||||||||||||||||||| ||| ||||||| |||||||||||||    
T  15862519 gatactacctaaatagttaagggacaaaaaatgcaatttagcctaat 15862565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26332364 - 26332318
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||| | ||||||||||| ||||||||||    
T  26332364 agcgatactacctaaatagttaggggaccaaaaatgcaatttagcct 26332318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 27940314 - 27940272
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  27940314 gatactacctaaatagttaagggaccaaaaatgaaatttagcc 27940272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34521598 - 34521640
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  34521598 agcgatactacctaaatagttaagggaccaaaaatgcaattta 34521640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 40410757 - 40410715
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  40410757 agcgatactacctaaatagttaagggaccaaaaatgcaattta 40410715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44069464 - 44069510
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||    
T  44069464 agcgatactacctaaatagttaagggaccaaaaatacaatttagcct 44069510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 8846117 - 8846076
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  8846117 atactacctaaatagttaagggaccaaaaatgcaatttagcc 8846076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31513908 - 31513863
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||    
T  31513908 agcgatactacctaaatagttaatggaccaaaaatgcaatttagcc 31513863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33812884 - 33812929
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||| ||||| ||||||||||| |||||||||    
T  33812884 agcgatactacctaaatatttaagagaccaaaaatgaaatttagcc 33812929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 41998158 - 41998203
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||    
T  41998158 gatactacctaaatagttaagggaccaaaaatacaatttagcctaa 41998203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 51311859 - 51311908
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaat 50  Q
    ||||||||||  |||||||||||  |||||||||||||||||||||||||    
T  51311859 agcgatactaattaaatagttaacagaccaaaaatgtaatttagcctaat 51311908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 52609703 - 52609748
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||    
T  52609703 agcgatagtacctaaatagttaagggaccaaaaatggaatttagcc 52609748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7743106 - 7743154
Alignment:
Q  1 agcgatactacctaaatagttaagcgacc-aaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||||| |||| |||||||||||||| ||||    
T  7743106 agcgatactacctaaatagttaagggaccaaaaaatgtaatttaaccta 7743154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 35580292 - 35580332
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  35580292 cgatactacctaaatagttaagggaccaaaaatgcaattta 35580332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35753448 - 35753408
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatt 41  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  35753448 agcgatactacctaaatagttaagggaccaaaaatgcaatt 35753408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41208446 - 41208398
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    ||||||||||| |||||||||||| ||||||||||| |||||| |||||    
T  41208446 agcgatactacttaaatagttaagggaccaaaaatgcaatttaacctaa 41208398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43899415 - 43899463
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    ||||||| ||||||||||||||||  |||||||||| ||||||||||||    
T  43899415 agcgatattacctaaatagttaaggaaccaaaaatgcaatttagcctaa 43899463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 45171408 - 45171452
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagc 45  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||||    
T  45171408 agcgatactacctaaatagttaagggactaaaaatgcaatttagc 45171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 43527066 - 43527023
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||| || |||||||| |||||||||    
T  43527066 cgatactacctaaatagttaagggatcaaaaatgcaatttagcc 43527023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 7937907 - 7937949
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    ||||||||||||||||||||  ||||||||||| |||||||||    
T  7937907 gatactacctaaatagttaaaggaccaaaaatgaaatttagcc 7937949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 19124515 - 19124556
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagc 45  Q
    |||||||||||||||||||||| |||||||||| |||||||||    
T  19124515 cgatactacctaaatagttaag-gaccaaaaatataatttagc 19124556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 33812765 - 33812727
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  33812765 atactacctaaatagttaagggaccaaaaatgaaattta 33812727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 50819558 - 50819608
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaatt 51  Q
    ||||||||||||| || ||||||| ||||||||||| ||||||||| ||||    
T  50819558 agcgatactaccttaacagttaagagaccaaaaatgcaatttagccgaatt 50819608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 50856306 - 50856256
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaatt 51  Q
    ||||||||||||| || ||||||| ||||||||||| ||||||||| ||||    
T  50856306 agcgatactaccttaacagttaagagaccaaaaatgcaatttagccgaatt 50856256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 54081629 - 54081671
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||| ||||||||||  ||||||||||    
T  54081629 atactacctaaatagttaagggaccaaaaatacaatttagcct 54081671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 54108461 - 54108507
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||| ||||||| ||||| ||||||||||| ||||||||||    
T  54108461 agcgatactagctaaataattaagggaccaaaaatgcaatttagcct 54108507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 14353389 - 14353422
Alignment:
Q  2 gcgatactacctaaatagttaagcgaccaaaaat 35  Q
    ||||||||||||||||||||||| ||||||||||    
T  14353389 gcgatactacctaaatagttaagggaccaaaaat 14353422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 15862227 - 15862182
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||| ||||| |||| |||||| |||||||||    
T  15862227 agcgatactacctaaataattaagggacctaaaatggaatttagcc 15862182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 51170724 - 51170765
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttag 44  Q
    |||||||||||||||||||||| || |||||||| |||||||    
T  51170724 cgatactacctaaatagttaagggatcaaaaatgcaatttag 51170765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 14353091 - 14353043
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||||||||| ||||| || |||||||| |||||| |||||    
T  14353091 agcgatactacctaaataattaagggatcaaaaatgcaatttaacctaa 14353043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 21169709 - 21169677
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaat 35  Q
    |||||||||||||||||||||| ||||||||||    
T  21169709 cgatactacctaaatagttaagagaccaaaaat 21169677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 34630025 - 34629985
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    ||||||||| |||||||||||| |||||||||| |||||||    
T  34630025 cgatactacttaaatagttaagggaccaaaaatataattta 34629985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 44316670 - 44316626
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    ||||||||  |||||||||||| ||||||||||| ||||||||||    
T  44316670 cgatactaattaaatagttaagggaccaaaaatgcaatttagcct 44316626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 45872032 - 45872064
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaat 35  Q
    |||||||||||||||||||||| ||||||||||    
T  45872032 cgatactacctaaatagttaagggaccaaaaat 45872064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 50819265 - 50819217
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||| |||| |||||||||||| ||||||||||| |||| |||||||    
T  50819265 agcgatgctacgtaaatagttaagggaccaaaaatgcaattaagcctaa 50819217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50856599 - 50856647
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||| |||| |||||||||||| ||||||||||| |||| |||||||    
T  50856599 agcgatgctacgtaaatagttaagggaccaaaaatgcaattaagcctaa 50856647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 52268446 - 52268490
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||| ||||||||||||  ||||||||||| ||||||||||    
T  52268446 cgatactaactaaatagttaatggaccaaaaatgcaatttagcct 52268490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 24456994 - 24457041
Alignment:
Q  2 gcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  24456994 gcgatactacctaaatagttaagggaccaaaaatgcaatttagcctaa 24457041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24456779 - 24456733
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  24456779 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcct 24456733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 29027311 - 29027357
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||    
T  29027311 cgatactacctaaatagttaagagaccaaaaatataatttagcctaa 29027357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 31230958 - 31230999
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  31230958 atactacctaaatagttaagggaccaaaaatgtaatttagcc 31230999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37393818 - 37393867
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaat 50  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  37393818 agcgatactacctaaatagttaagggaccaaaaatgcaatttagtctaat 37393867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40040207 - 40040162
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||    
T  40040207 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcc 40040162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 30872824 - 30872781
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  30872824 atactacctaaatagttaagggaccaaaaatgcaatttagccta 30872781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 31230655 - 31230612
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||    
T  31230655 gatactacctaaatagttaagggaccaaaaatgtagtttagcct 31230612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 35223819 - 35223772
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||||||    
T  35223819 agcgatactacctaaatagtaaagggaccaaaaatgcaatttagccta 35223772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 39912263 - 39912302
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  39912263 gatactacctaaatagttaagggaccaaaaatgtaattta 39912302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26736170 - 26736128
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  26736170 agcgatactacctaaatagttaagagaccaaaaatgcaattta 26736128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 44678358 - 44678316
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||| ||||||||||| ||||||||||    
T  44678358 atactacctaaatagttaagggaccaaaaatgcaatttagcct 44678316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11198546 - 11198595
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaat 50  Q
    |||||||||  ||||||||||||| ||||||||||| |||||||||||||    
T  11198546 agcgatactgtctaaatagttaagggaccaaaaatgcaatttagcctaat 11198595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 35224110 - 35224155
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||||    
T  35224110 cgatactaactaaatagttaagggaccaaaaatgcaatttagccta 35224155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 39240072 - 39240031
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagc 45  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  39240072 gatactacctaaatagttaagggaccaaaaatgcaatttagc 39240031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40032471 - 40032426
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||| ||||| ||||||||||| |||||||||    
T  40032471 agcgatactacctaaataattaagtgaccaaaaatgcaatttagcc 40032426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 3869292 - 3869336
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||    
T  3869292 cgatactacctaaatagttaagggaccaaaaatacaatttagcct 3869336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 6843537 - 6843493
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||||    
T  6843537 gatactacctaaatagttaagggaccaaaaatgcaatttaaccta 6843493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 11639378 - 11639422
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||    
T  11639378 cgatactacctaaatagttaagggacgaaaaatgcaatttagcct 11639422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 18017831 - 18017787
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||||    
T  18017831 atactacctaaatagttaagggaccaaatatgcaatttagcctaa 18017787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 119158 - 119119
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttag 44  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  119158 atactacctaaatagttaagggaccaaaaatgcaatttag 119119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 5417154 - 5417189
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatg 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  5417154 agcgatactacctaaatagttaagggaccaaaaatg 5417189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7041965 - 7042012
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    ||||||||||  |||||||||||| ||||||||||| |||||||||||    
T  7041965 agcgatactatataaatagttaagggaccaaaaatgcaatttagccta 7042012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 758389 - 758347
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||||||| | ||||||||| ||||||    
T  758389 agcgatactacctaaatagttaaggggccaaaaatgcaattta 758347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 758688 - 758734
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcctaat 50  Q
    |||||||| |||||||||||| ||||||| ||| |||||||||||||    
T  758688 gatactacttaaatagttaagggaccaaacatgcaatttagcctaat 758734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 1826132 - 1826166
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaat 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  1826132 agcgatactacctaaatagttaagggaccaaaaat 1826166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 1860577 - 1860611
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaat 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  1860577 agcgatactacctaaatagttaagggaccaaaaat 1860611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6844781 - 6844823
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||    
T  6844781 agcgatgctacctaaatagttaagagaccaaaaatgcaattta 6844823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 16645893 - 16645931
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  16645893 atactacctaaatagttaagggaccaaaaatgcaattta 16645931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21515541 - 21515591
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaatt 51  Q
    ||||||||||| |||||||||||  ||| ||||||||||||||||| ||||    
T  21515541 agcgatactacgtaaatagttaaaagactaaaaatgtaatttagccaaatt 21515591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 119457 - 119502
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| || ||| |||| |||||||||    
T  119457 agcgatactacctaaatagttaagggatcaacaatgcaatttagcc 119502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 5416855 - 5416810
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||| | ||||||||||  |||||||||||    
T  5416855 cgatactacctaaatagttaggggaccaaaaatacaatttagccta 5416810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18622088 - 18622133
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||| ||||||||||||| |||||||| || |||||||||    
T  18622088 agcgatactatctaaatagttaagagaccaaaagtgcaatttagcc 18622133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18914592 - 18914637
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||| ||||||||||||||| | ||||||||||| |||||||||    
T  18914592 agcgatgctacctaaatagttaggggaccaaaaatgcaatttagcc 18914637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23244856 - 23244905
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaat 50  Q
    |||||||||| ||||||||||||| ||||||||||| ||| || ||||||    
T  23244856 agcgatactatctaaatagttaagggaccaaaaatgcaatctaacctaat 23244905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 37393520 - 37393475
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||| ||||||||||  |||||| ||||    
T  37393520 cgatactacctaaatagttaagggaccaaaaatacaatttaaccta 37393475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 8653979 - 8653935
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||| | ||||||||||  ||||||||||    
T  8653979 cgatactacctaaatagttaggggaccaaaaatacaatttagcct 8653935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14920752 - 14920792
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatt 41  Q
    ||||||||||| |||||||||||| ||||||||||| ||||    
T  14920752 agcgatactacttaaatagttaagggaccaaaaatgcaatt 14920792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 39240362 - 39240402
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||| ||||| ||||||||||| ||||||    
T  39240362 cgatactacctaaataattaagggaccaaaaatgcaattta 39240402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 40094828 - 40094864
Alignment:
Q  13 taaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  40094828 taaatagttaagggaccaaaaatgtaattttgcctaa 40094864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 48209990 - 48209947
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  48209990 gatactacctaaatagttaagggaccaaaaatgtaatttagcct 48209947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21217892 - 21217846
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  21217892 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcct 21217846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 54136136 - 54136090
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  54136136 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcct 54136090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 11242808 - 11242849
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagc 45  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  11242808 gatactacctaaatagttaagggaccaaaaatgtaatttagc 11242849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18862782 - 18862827
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||    
T  18862782 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcc 18862827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33626205 - 33626250
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||    
T  33626205 agcgatactacctaaatagttaagggaccaaaaatgaaatttagcc 33626250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 44710448 - 44710403
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||    
T  44710448 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcc 44710403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 45683162 - 45683117
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| || ||||||||||||||||||    
T  45683162 agcgatactacctaaatagttaagagatcaaaaatgtaatttagcc 45683117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38866443 - 38866395
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  38866443 agcgatactacctaaatagttaagggaccaaaaatacaatttagcctaa 38866395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 9010849 - 9010892
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    ||||||||||||||||||||| |||||||||| |||||||||||    
T  9010849 gatactacctaaatagttaagggaccaaaaatataatttagcct 9010892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 32385152 - 32385199
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  32385152 agcgatactacctaaatagttaagggaccaaaaatgcaatttaaccta 32385199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 46200526 - 46200483
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||    
T  46200526 gatactacctaaatagttaagggaccaaaaatgcaatttagcct 46200483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 52914997 - 52914950
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||||    
T  52914997 agcgatactacctaaatagttaagggaccaaaaatacaatttagccta 52914950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1205718 - 1205763
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    ||||||||| |||||||||||||| ||||||||||| |||||||||    
T  1205718 agcgatactgcctaaatagttaagggaccaaaaatgcaatttagcc 1205763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 10014506 - 10014465
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  10014506 atactacctaaatagttaagggaccaaaaatgcaatttagcc 10014465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 10017856 - 10017815
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  10017856 atactacctaaatagttaagggaccaaaaatgcaatttagcc 10017815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 10021647 - 10021606
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  10021647 atactacctaaatagttaagggaccaaaaatgcaatttagcc 10021606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 21218188 - 21218233
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| || |||||||| |||||||||    
T  21218188 agcgatactacctaaatagttaagggatcaaaaatgcaatttagcc 21218233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32384698 - 32384653
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||    
T  32384698 agcgatactacctaaatagttaagggaccaaaaatacaatttagcc 32384653  T

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Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33625909 - 33625868
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaattt 42  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  33625909 agcgatactacctaaatagttaagggaccaaaaatgcaattt 33625868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33882290 - 33882331
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaattt 42  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  33882290 agcgatactacctaaatagttaagggaccaaaaatgcaattt 33882331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 34958877 - 34958832
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||    
T  34958877 agcgatactacctaaatagttaagggaccaaaaatacaatttagcc 34958832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 46200826 - 46200871
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||||    
T  46200826 agcgttactacctaaatagttaagagaccaaaaatgcaatttagcc 46200871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 46535568 - 46535523
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||    
T  46535568 agcgatactacctaaatagttaagggaccaaaaatacaatttagcc 46535523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 9010547 - 9010503
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||    
T  9010547 gatactacctaaataattaagggaccaaaaatgcaatttagccta 9010503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 24504283 - 24504323
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  24504283 cgatattacctaaatagttaagggaccaaaaatgtaattta 24504323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25058878 - 25058830
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||||||||||||||| ||| ||||||| |||||| |||||    
T  25058878 agcgatactacctaaatagttaagagacaaaaaatgcaatttaacctaa 25058830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 46621270 - 46621310
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  46621270 cgatactacctaaatagttaagggaccaaaaatgcaattta 46621310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 29864516 - 29864559
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttag 44  Q
    |||||||||||||||||||||||| ||||||||||  |||||||    
T  29864516 agcgatactacctaaatagttaagggaccaaaaatacaatttag 29864559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 43317220 - 43317267
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||| | ||| ||||||| |||||||||||    
T  43317220 agcgatactacctaaatagttaggagactaaaaatgcaatttagccta 43317267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1205423 - 1205381
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||||||| |||||||| || ||||||    
T  1205423 agcgatactacctaaatagttaagggaccaaaagtgcaattta 1205381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25218129 - 25218087
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||    
T  25218129 agcgatattacctaaatagttaagggaccaaaaatgaaattta 25218087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29864221 - 29864175
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| ||  ||||||| ||||||||||    
T  29864221 agcgatactacctaaatagttaagggataaaaaatgcaatttagcct 29864175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29970238 - 29970196
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||||| | ||||||||||| ||||||    
T  29970238 agcgatactacctaaatagttatgggaccaaaaatgcaattta 29970196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 10014806 - 10014851
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||| ||| ||||||| || ||||||||    
T  10014806 cgatactacctaaatagttaagggacaaaaaatgcaacttagccta 10014851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 10021947 - 10021992
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||| ||| ||||||| || ||||||||    
T  10021947 cgatactacctaaatagttaagggacaaaaaatgcaacttagccta 10021992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 29970516 - 29970556
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttag 44  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  29970516 cgatactacctaaatagttaag-gaccaaaaatgcaatttag 29970556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40067689 - 40067734
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| || |||||||  |||||||||    
T  40067689 agcgatactacctaaatagttaagggatcaaaaatacaatttagcc 40067734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 46620968 - 46620931
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaattt 42  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  46620968 atactacctaaatagttaagggaccaaaaatgcaattt 46620931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21051404 - 21051360
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagc 45  Q
    |||||| ||||||||||| ||||| ||| ||||||||||||||||    
T  21051404 agcgatgctacctaaataattaagggacaaaaaatgtaatttagc 21051360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43316924 - 43316877
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    ||||||||||||| |||||||||| ||||||||||  ||||||||||||    
T  43316924 agcgatactaccttaatagttaag-gaccaaaaatacaatttagcctaa 43316877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 46535867 - 46535907
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagc 45  Q
    |||||||||||||||||||| ||||||||||  ||||||||    
T  46535867 atactacctaaatagttaagtgaccaaaaatacaatttagc 46535907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11828 - 11878
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaatt 51  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| ||||    
T  11828 agcgatactacctaaatagttaagggaccaaaaatgcaatttagccaaatt 11878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 11533 - 11485
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||  ||||||||||||| ||||||||||| ||||||||||||    
T  11533 agcgatactttctaaatagttaagggaccaaaaatgcaatttagcctaa 11485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16736146 - 16736100
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  16736146 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcct 16736100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31450711 - 31450665
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  31450711 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcct 31450665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 4104204 - 4104159
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||    
T  4104204 agcgatactacctaaatagttaagggaccaaaaatgcaatttagcc 4104159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 12303830 - 12303786
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagc 45  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||    
T  12303830 agcgatactacctaaatagttaagggaccaaaaatgcaatttagc 12303786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 27476710 - 27476754
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||    
T  27476710 cgatactacctaaatagttaagagaccaaaaatgcaatttagcct 27476754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 37744491 - 37744451
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttag 44  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  37744491 gatactacctaaatagttaagggaccaaaaatgtaatttag 37744451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 40694238 - 40694194
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||| |||||||||| |||||||||||    
T  40694238 cgatactacctaaatagttaagggaccaaaaatataatttagcct 40694194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 17856534 - 17856577
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  17856534 atactacctaaatagttaagggaccaaaaatgcaatttagccta 17856577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18565111 - 18565064
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    ||||||||| |||||||||||||| ||||||||||| |||||||||||    
T  18565111 agcgatactgcctaaatagttaagagaccaaaaatgcaatttagccta 18565064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 39150166 - 39150213
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||    
T  39150166 agcgatactacctaaatagttaaaggaccaaaaatgcaatttagccta 39150213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43183628 - 43183585
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttag 44  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  43183628 agcgatactacctaaatagttaagggactaaaaatgtaatttag 43183585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 5961714 - 5961668
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||||    
T  5961714 agcgatactacctaaatagttaaggggccaaaaatgcaatttagcct 5961668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13354518 - 13354568
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaatt 51  Q
    |||||||||||||||||||||||| |||||||| |  ||||||||||||||    
T  13354518 agcgatactacctaaatagttaagggaccaaaattacaatttagcctaatt 13354568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16261211 - 16261257
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||    
T  16261211 agcgatactacctaaatagttaagggaccaaaaatacaatttagcct 16261257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18565344 - 18565386
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  18565344 agcgatactacctaaatagttaagggaccaaaaatgcaattta 18565386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28203201 - 28203247
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||||    
T  28203201 agcgatacgacctaaatagttaagggaccaaaaatgcaatttagcct 28203247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 41377698 - 41377740
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  41377698 gatactacctaaatagttaagggaccaaaaatgcaatttagcc 41377740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4104500 - 4104545
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||    
T  4104500 agcgatactacctaaatagttaagggaccaaaaatacaatttagcc 4104545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 4120809 - 4120764
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| ||| ||||||| |||||||||    
T  4120809 agcgatactacctaaatagttaagggacaaaaaatgcaatttagcc 4120764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 15137150 - 15137191
Alignment:
Q  6 tactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  15137150 tactacctaaatagttatgtgaccaaaaatgtaatttagcct 15137191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 20908852 - 20908897
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||    
T  20908852 agcgatactacctaaatagttaagggaccaaaaatacaatttagcc 20908897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28202905 - 28202860
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||    
T  28202905 agcgatattacctaaatagttaagggaccaaaaatgcaatttagcc 28202860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 28631319 - 28631278
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaattt 42  Q
    |||||| ||||||||||||||||| |||||||||||||||||    
T  28631319 agcgatgctacctaaatagttaagggaccaaaaatgtaattt 28631278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32933932 - 32933977
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||    
T  32933932 agcgatattacctaaatagttaagggaccaaaaatgcaatttagcc 32933977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 36211740 - 36211785
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||    
T  36211740 agcgatactacctaaatagttaagagaccaaaaatacaatttagcc 36211785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 4121106 - 4121146
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  4121106 cgatactacctaaatagttaagggaccaaaaatgcaattta 4121146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16260916 - 16260872
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagc 45  Q
    |||||||||||||||||||||||| |||||||||||  |||||||    
T  16260916 agcgatactacctaaatagttaagggaccaaaaatgctatttagc 16260872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 32933633 - 32933589
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||||    
T  32933633 gatactacctaaatagttaagggaccaaaaatgcaatttaaccta 32933589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 39454493 - 39454449
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||| |||||||||||| ||||||||||| |||||||||||    
T  39454493 gatactacttaaatagttaagggaccaaaaatgcaatttagccta 39454449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44610907 - 44610859
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    ||||||| |||||||||||||||| ||||||||||| |||||| |||||    
T  44610907 agcgatattacctaaatagttaagggaccaaaaatgcaatttaacctaa 44610859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 12304126 - 12304161
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatg 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  12304126 agcgatactacctaaatagttaagggaccaaaaatg 12304161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12304495 - 12304542
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    ||||||||||||||||| |||||| ||| ||||||| |||||||||||    
T  12304495 agcgatactacctaaattgttaagggacaaaaaatgcaatttagccta 12304542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 20297453 - 20297410
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    ||||||||||| |||||||||| ||||||||||| |||||||||    
T  20297453 cgatactacctgaatagttaagggaccaaaaatgaaatttagcc 20297410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27132556 - 27132509
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||||| ||||||||||  |||||| ||||    
T  27132556 agcgatactacctaaatagttaagggaccaaaaatacaatttaaccta 27132509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 27132857 - 27132896
Alignment:
Q  7 actacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  27132857 actacctaaatagttaagggaccaaaaatgcaatttagcc 27132896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 31451009 - 31451052
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||| || |||||||| |||||||||    
T  31451009 cgatactacctaaatagttaagggatcaaaaatgcaatttagcc 31451052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37412638 - 37412595
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttag 44  Q
    |||||||||| ||||||||||||| ||||||||||| |||||||    
T  37412638 agcgatactaactaaatagttaagggaccaaaaatgcaatttag 37412595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 43183924 - 43183971
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||| ||||| ||||||||||| |||||| ||||    
T  43183924 agcgatactacctaaataattaagggaccaaaaatgcaatttaaccta 43183971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13354222 - 13354176
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| |||| |||||  ||||||||||    
T  13354222 agcgatactacctaaatagttaagggaccgaaaattcaatttagcct 13354176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20908556 - 20908510
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||| ||||| ||||||||||  ||||||||||    
T  20908556 agcgatactacctaaataattaagggaccaaaaatacaatttagcct 20908510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25642609 - 25642655
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| || |||||||  ||||||||||    
T  25642609 agcgatactacctaaatagttaagggaacaaaaatacaatttagcct 25642655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 39912672 - 39912638
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaat 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  39912672 agcgatactacctaaatagttaagggaccaaaaat 39912638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 39912971 - 39913017
Alignment:
Q  4 gatactacctaaa-tagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  39912971 gatactacctaaaatagttaagggaccaaaaatgcaatttagcctaa 39913017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41377399 - 41377354
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||    
T  41377399 agcgatactacctaaatagttaag-gaccaaaaatacaatttagcct 41377354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10833376 - 10833421
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    ||||||||||||||||||| |||| ||||||||||| |||| ||||    
T  10833376 agcgatactacctaaatagctaagggaccaaaaatgcaattcagcc 10833421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 14877526 - 14877481
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||  | ||||||||||| |||||||||||    
T  14877526 cgatactacctaaatagttttgggaccaaaaatgcaatttagccta 14877481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 16655949 - 16655994
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||| ||||||||||  |||||| ||||    
T  16655949 cgatactacctaaatagttaagggaccaaaaatacaatttaaccta 16655994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17856244 - 17856199
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||| ||||| |||| |||||| |||||||||    
T  17856244 agcgatactacctaaataattaagggaccgaaaatgaaatttagcc 17856199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 21470337 - 21470292
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||| |||||||||||||  ||||||||||| ||||||||||||    
T  21470337 gatactgcctaaatagttaaaggaccaaaaatgcaatttagcctaa 21470292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34820324 - 34820283
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaattt 42  Q
    ||||||||||| |||||||||||| ||||||||||| |||||    
T  34820324 agcgatactacttaaatagttaagggaccaaaaatgcaattt 34820283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 38275801 - 38275842
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagc 45  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||    
T  38275801 gatactacctaaatagttaagggacaaaaaatgcaatttagc 38275842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 45389170 - 45389129
Alignment:
Q  7 actacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    ||||||||||||||| || ||||||||||| |||||||||||    
T  45389170 actacctaaatagttcagggaccaaaaatgcaatttagccta 45389129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21470635 - 21470675
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatt 41  Q
    |||||||||||||||||||||||| ||| ||||||| ||||    
T  21470635 agcgatactacctaaatagttaagggactaaaaatggaatt 21470675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34820620 - 34820668
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    ||||| |||||||||||||||||| ||||||||||  |||||| |||||    
T  34820620 agcgagactacctaaatagttaagggaccaaaaatacaatttaacctaa 34820668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 36442479 - 36442519
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagc 45  Q
    |||||| ||||||||||||| |||||||||| |||||||||    
T  36442479 atactatctaaatagttaagggaccaaaaatataatttagc 36442519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 37412920 - 37412964
Alignment:
Q  2 gcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||| |||||||||||| | ||||||||| |||||||||    
T  37412920 gcgatactacttaaatagttaaggggccaaaaatgcaatttagcc 37412964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 39454774 - 39454822
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    ||||||||||||| |||||| ||| ||||||||||| ||||||| ||||    
T  39454774 agcgatactacctgaatagtcaagggaccaaaaatgcaatttagtctaa 39454822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 3338522 - 3338475
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  3338522 agcgatactacctaaatagttaagggacaaaaaatgcaatttagccta 3338475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 24605216 - 24605259
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||| |||||||||||||||| ||||    
T  24605216 cgatactacctaaatagttaagggaccaaaaatgtaattaagcc 24605259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3288975 - 3288929
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  3288975 agcgatactacctaaatagttaagggaccataaatgcaatttagcct 3288929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 24604920 - 24604878
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  24604920 agcgatactacctaaatagttaagggaccaaaaatgcaattta 24604878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35132646 - 35132600
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||    
T  35132646 agcgatactacctaaatagttaatggaccaaaaatgcaatttagcct 35132600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1158633 - 1158588
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||    
T  1158633 agcgatactacctaaatagttaaaggaccaaaaatgtaattaagcc 1158588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9173946 - 9173901
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||    
T  9173946 agcgatactacctaaatagttaagggaccaaaaatacaatttagcc 9173901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 11525108 - 11525152
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||    
T  11525108 cgatactacctaaattgttaagggaccaaaaatgcaatttagcct 11525152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 13155882 - 13155842
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  13155882 cgatactacctaaatagttaagagaccaaaaatataattta 13155842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 13160738 - 13160698
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  13160738 cgatactacctaaatagttaagagaccaaaaatataattta 13160698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 13156179 - 13156217
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  13156179 atactacctaaatagttaagggacaaaaaatgtaattta 13156217  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 13161035 - 13161073
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  13161035 atactacctaaatagttaagggacaaaaaatgtaattta 13161073  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 19135789 - 19135835
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||||||| ||||  ||||||||||| ||||||||||||    
T  19135789 cgatactacctaaatacttaatggaccaaaaatgcaatttagcctaa 19135835  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 25551388 - 25551346
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||| ||||||||||  ||||||||||    
T  25551388 atactacctaaatagttaagggaccaaaaatacaatttagcct 25551346  T

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Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 33329247 - 33329205
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||| || |||||||| ||||||||||    
T  33329247 atactacctaaatagttaagggatcaaaaatgcaatttagcct 33329205  T

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Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33548198 - 33548244
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| ||| ||||||  ||||||||||    
T  33548198 agcgatactacctaaatagttaagggactaaaaattcaatttagcct 33548244  T

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Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 33971969 - 33971931
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaattta 43  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  33971969 atactacctaaatagttaagggaccaaaaatgcaattta 33971931  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3289251 - 3289296
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    ||||||| ||||||||||||| || ||||||||||| |||||||||    
T  3289251 agcgatattacctaaatagtttagggaccaaaaatgcaatttagcc 3289296  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24548286 - 24548241
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    ||||||||||  |||||||||||| ||||||||||| |||||||||    
T  24548286 agcgatactaattaaatagttaagggaccaaaaatgcaatttagcc 24548241  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 32864464 - 32864427
Alignment:
Q  14 aaatagttaagcgaccaaaaatgtaatttagcctaatt 51  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  32864464 aaatacttaagcgaccaaaagtgtaatttagcctaatt 32864427  T

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Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 33545166 - 33545211
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    ||||||||||||||||||||   ||||||||| |||||||||||||    
T  33545166 gatactacctaaatagttaatgcaccaaaaatataatttagcctaa 33545211  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1158930 - 1158978
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    ||||||||||| ||||||||||||  |||||||||| || |||||||||    
T  1158930 agcgatactacttaaatagttaaggtaccaaaaatgcaagttagcctaa 1158978  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 1860835 - 1860871
Alignment:
Q  10 acctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  1860835 acctaaatagttaagggaccaaaaatgcaatttagcc 1860871  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 3338818 - 3338862
Alignment:
Q  3 cgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    ||||||||| |||||||||||| ||||||||||  ||||||||||    
T  3338818 cgatactacttaaatagttaagggaccaaaaataaaatttagcct 3338862  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6220397 - 6220441
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagc 45  Q
    |||||||||||||||||||||||| ||  ||||||| ||||||||    
T  6220397 agcgatactacctaaatagttaagggattaaaaatgcaatttagc 6220441  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11524750 - 11524706
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagc 45  Q
    |||||||||||||||||||||||  ||||||||||  ||||||||    
T  11524750 agcgatactacctaaatagttaaaggaccaaaaatacaatttagc 11524706  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 11524810 - 11524778
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaa 33  Q
    |||||||||||||||||||||||| ||||||||    
T  11524810 agcgatactacctaaatagttaagggaccaaaa 11524778  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 33548160 - 33548124
Alignment:
Q  13 taaatagttaagcgaccaaaaatgtaatttagcctaa 49  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  33548160 taaatagttaagggaccaaaaatgcaatttagcctaa 33548124  T

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Target: scaffold0051 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 40697 - 40738
Alignment:
Q  5 atactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  40697 atactacctaaatagttaagggaccaaaaatgcaatttagcc 40738  T

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Target: scaffold1436 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1436
Description:

Target: scaffold1436; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 1520 - 1474
Alignment:
Q  2 gcgatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    ||||||||||||||||||||||| ||| ||||||| || ||||||||    
T  1520 gcgatactacctaaatagttaagtgacaaaaaatgcaacttagccta 1474  T

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Target: scaffold0236 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 11555 - 11601
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcct 47  Q
    |||||||||||||||||||||||| ||  ||||||| ||||||||||    
T  11555 agcgatactacctaaatagttaagggataaaaaatgcaatttagcct 11601  T

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Target: scaffold0128 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 45177 - 45222
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    ||||||| |||||||||||||||| ||| ||||||| |||||||||    
T  45177 agcgataatacctaaatagttaagggactaaaaatgcaatttagcc 45222  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 90850 - 90805
Alignment:
Q  1 agcgatactacctaaatagttaagcgaccaaaaatgtaatttagcc 46  Q
    |||||||||||||||||||||||| ||| ||||||| ||| |||||    
T  90850 agcgatactacctaaatagttaagggactaaaaatgcaatgtagcc 90805  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 177409 - 177453
Alignment:
Q  4 gatactacctaaatagttaagcgaccaaaaatgtaatttagccta 48  Q
    |||| |||||||||| ||||| ||||||||||| |||||||||||    
T  177409 gataatacctaaataattaagggaccaaaaatgcaatttagccta 177453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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