View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12700_low_25 (Length: 251)

Name: NF12700_low_25
Description: NF12700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12700_low_25
NF12700_low_25
[»] chr7 (10 HSPs)
chr7 (17-164)||(15672282-15672434)
chr7 (171-244)||(37405525-37405598)
chr7 (205-244)||(4895667-4895706)
chr7 (205-244)||(28124697-28124736)
chr7 (205-244)||(28126524-28126563)
chr7 (205-244)||(44963246-44963285)
chr7 (205-243)||(20046605-20046643)
chr7 (17-45)||(15667007-15667035)
chr7 (171-211)||(21631305-21631345)
chr7 (171-211)||(34844169-34844209)
[»] chr6 (9 HSPs)
chr6 (171-244)||(15868475-15868548)
chr6 (171-244)||(15866663-15866736)
chr6 (171-244)||(33866182-33866255)
chr6 (171-244)||(33869329-33869402)
chr6 (205-244)||(1088762-1088801)
chr6 (205-244)||(19645409-19645448)
chr6 (205-243)||(5376962-5377000)
chr6 (205-243)||(5378817-5378855)
chr6 (171-212)||(24544733-24544774)
[»] chr1 (6 HSPs)
chr1 (171-244)||(3284585-3284658)
chr1 (171-244)||(9310495-9310568)
chr1 (171-244)||(9312112-9312185)
chr1 (171-244)||(3282884-3282957)
chr1 (171-241)||(902162-902232)
chr1 (205-244)||(17449394-17449433)
[»] scaffold0251 (1 HSPs)
scaffold0251 (171-244)||(6309-6382)
[»] chr5 (1 HSPs)
chr5 (171-244)||(39787134-39787207)
[»] chr4 (7 HSPs)
chr4 (195-244)||(3529246-3529295)
chr4 (205-244)||(7040444-7040483)
chr4 (205-244)||(23564784-23564823)
chr4 (205-244)||(23566458-23566497)
chr4 (205-244)||(52520684-52520723)
chr4 (205-244)||(54296511-54296550)
chr4 (195-244)||(23985857-23985906)
[»] chr8 (3 HSPs)
chr8 (205-244)||(30224313-30224352)
chr8 (205-244)||(6428823-6428862)
chr8 (205-244)||(25249089-25249128)
[»] chr2 (3 HSPs)
chr2 (205-244)||(29758203-29758242)
chr2 (171-211)||(20957557-20957597)
chr2 (171-211)||(20957729-20957769)
[»] scaffold0057 (1 HSPs)
scaffold0057 (205-244)||(58869-58908)
[»] chr3 (2 HSPs)
chr3 (205-244)||(1140084-1140123)
chr3 (205-243)||(17402891-17402929)
[»] scaffold0289 (1 HSPs)
scaffold0289 (18-46)||(19879-19907)


Alignment Details
Target: chr7 (Bit Score: 62; Significance: 7e-27; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 164
Target Start/End: Original strand, 15672282 - 15672434
Alignment:
Q  17 aaaaacagccaaaagtgtacacacttcatgacttgcagcattggaaatatggacaccatggaagctatagggtgatgg-------cttaagatactttgt 109  Q
    ||||||||||||||| ||||||||||||||   || ||| ||||||||||||||||||||||||||||||||||| ||       ||||||||||||| |    
T  15672282 aaaaacagccaaaagagtacacacttcatggtctgaagcgttggaaatatggacaccatggaagctatagggtgagggcttagcacttaagatactttat 15672381  T
Q  110 tatgattggaagcaatatgtagttagtagcgttgcacatatttattggaaaccaa 164  Q
    | ||||||||  | ||||||| ||||||| |||||| |||||||| |||||||||    
T  15672382 tttgattgga--ctatatgtaattagtagtgttgcagatatttataggaaaccaa 15672434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 37405525 - 37405598
Alignment:
Q  171 atagtaactcatagtagagtaaactagatttaacaaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||| |||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  37405525 atagtgactcataggagagtaaactagatttaacaaaagatagtgaatgagtacaatagtgttcctatatatag 37405598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 244
Target Start/End: Complemental strand, 4895706 - 4895667
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  4895706 aaaagatgatgaatgagtacaatagtgttcctatatatag 4895667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 244
Target Start/End: Original strand, 28124697 - 28124736
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  28124697 aaaagatgatgaatgagtacaatagtgttcctatatatag 28124736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 244
Target Start/End: Original strand, 28126524 - 28126563
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  28126524 aaaagatgatgaatgagtacaatagtgttcctatatatag 28126563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 244
Target Start/End: Complemental strand, 44963285 - 44963246
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  44963285 aaaagatgatgaatgagtacaatagtgttcctatatatag 44963246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 20046605 - 20046643
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatata 243  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  20046605 aaaagatattgaatgagtacaatagtgttcctatatata 20046643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 15667007 - 15667035
Alignment:
Q  17 aaaaacagccaaaagtgtacacacttcat 45  Q
    |||||||||||||||||||||||||||||    
T  15667007 aaaaacagccaaaagtgtacacacttcat 15667035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 21631305 - 21631345
Alignment:
Q  171 atagtaactcatagtagagtaaactagatttaacaaaagat 211  Q
    ||||| ||||||||||||||||||||||||| | |||||||    
T  21631305 atagtgactcatagtagagtaaactagatttgataaaagat 21631345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 34844209 - 34844169
Alignment:
Q  171 atagtaactcatagtagagtaaactagatttaacaaaagat 211  Q
    ||||| ||||||||||||||||||||||||| | |||||||    
T  34844209 atagtgactcatagtagagtaaactagatttgataaaagat 34844169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 7e-27; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 15868548 - 15868475
Alignment:
Q  171 atagtaactcatagtagagtaaactagatttaacaaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15868548 atagtgactcataggagagtaaactagatttaacaaaagataatgaatgagtacaatagtgttcctatatatag 15868475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 15866736 - 15866663
Alignment:
Q  171 atagtaactcatagtagagtaaactagatttaacaaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  15866736 atagtgactcataggagagtaaactagatttaacaaaagataatgaatgagtacaatagtgttcctaaatatag 15866663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 33866255 - 33866182
Alignment:
Q  171 atagtaactcatagtagagtaaactagatttaacaaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||| || ||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  33866255 atagtgacccataggagagtaaactagatttaacaaaagatagtgaatgagtacaatagtgttcctatatatag 33866182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 33869402 - 33869329
Alignment:
Q  171 atagtaactcatagtagagtaaactagatttaacaaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||| |||||||| ||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||    
T  33869402 atagtgactcataggagagtaaactagatttaacaaaagatagtgaatgcgtacaatagtgttcctatatatag 33869329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 244
Target Start/End: Original strand, 1088762 - 1088801
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  1088762 aaaagatgatgaatgagtacaatagtgttcctatatatag 1088801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 244
Target Start/End: Original strand, 19645409 - 19645448
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  19645409 aaaagataatgaatgagtacaatagtgttcttatatatag 19645448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Complemental strand, 5377000 - 5376962
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatata 243  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  5377000 aaaagatattgaatgagtacaatagtgttcctatatata 5376962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Complemental strand, 5378855 - 5378817
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatata 243  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  5378855 aaaagatattgaatgagtacaatagtgttcctatatata 5378817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 24544774 - 24544733
Alignment:
Q  171 atagtaactcatagtagagtaaactagatttaacaaaagata 212  Q
    |||| |||||||||||||||||||||||||| | ||||||||    
T  24544774 atagaaactcatagtagagtaaactagatttgataaaagata 24544733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 3284658 - 3284585
Alignment:
Q  171 atagtaactcatagtagagtaaactagatttaacaaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||| |||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  3284658 atagtgactcataggagagtaaactagatttaacaaaagatagtgaatgagtacaatagtgttcctatatatag 3284585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 9310568 - 9310495
Alignment:
Q  171 atagtaactcatagtagagtaaactagatttaacaaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||| |||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9310568 atagtgactcataggagagtaaattagatttaacaaaagataatgaatgagtacaatagtgttcctatatatag 9310495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 9312185 - 9312112
Alignment:
Q  171 atagtaactcatagtagagtaaactagatttaacaaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9312185 atagtgactcatgggagagtaaactagatttaacaaaagataatgaatgagtacaatagtgttcctatatatag 9312112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 3282957 - 3282884
Alignment:
Q  171 atagtaactcatagtagagtaaactagatttaacaaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||| ||| |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  3282957 atagtgacttataggagagtaaactagatttaacaaaagatagtgaatgagtacaatagtgttcctatatatag 3282884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 902232 - 902162
Alignment:
Q  171 atagtaactcatagtagagtaaactagatttaacaaaagataatgaatgaatacaatagtgttcctatata 241  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||   |||||  ||||||||||||||    
T  902232 atagtgactcataggagagtaaactagatttaacaaaagataatgaaatgatacatgagtgttcctatata 902162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 244
Target Start/End: Complemental strand, 17449433 - 17449394
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  17449433 aaaagataatgaatgagtacaatagtgttcctatatatag 17449394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 6382 - 6309
Alignment:
Q  171 atagtaactcatagtagagtaaactagatttaacaaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||| |||||||| |||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  6382 atagtgactcataggagagtaaacttgatttaacaaaagatagtgaatgagtacaatagtgttcctatatatag 6309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 39787134 - 39787207
Alignment:
Q  171 atagtaactcatagtagagtaaactagatttaacaaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||| ||| |||| ||||||||||||||||||||||||| | ||||||| || ||||||||||||||||||||    
T  39787134 atagtgacttataggagagtaaactagatttaacaaaagacagtgaatgagtaaaatagtgttcctatatatag 39787207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 3529246 - 3529295
Alignment:
Q  195 tagatttaacaaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||||| | |||||||||||||||| |||||||||||||||||||||||    
T  3529246 tagatttgataaaagataatgaatgagtacaatagtgttcctatatatag 3529295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 244
Target Start/End: Complemental strand, 7040483 - 7040444
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  7040483 aaaagataatgaatgagtacaatagtgttcctatatatag 7040444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 244
Target Start/End: Original strand, 23564784 - 23564823
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  23564784 aaaagataatgaatgagtacaatagtgttcctatatatag 23564823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 244
Target Start/End: Original strand, 23566458 - 23566497
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  23566458 aaaagataatgaatgagtacaatagtgttcctatatatag 23566497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 244
Target Start/End: Complemental strand, 52520723 - 52520684
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  52520723 aaaagatgatgaatgagtacaatagtgttcctatatatag 52520684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 244
Target Start/End: Complemental strand, 54296550 - 54296511
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  54296550 aaaagatcatgaatgagtacaatagtgttcctatatatag 54296511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 23985906 - 23985857
Alignment:
Q  195 tagatttaacaaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||||| | |||||||  ||||||| |||||||||||||||||||||||    
T  23985906 tagatttgataaaagatggtgaatgagtacaatagtgttcctatatatag 23985857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 244
Target Start/End: Complemental strand, 30224352 - 30224313
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  30224352 aaaagataatgaatgagtacaatagtgttcctatatatag 30224313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 244
Target Start/End: Complemental strand, 6428862 - 6428823
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  6428862 aaaagatgatgaatgattacaatagtgttcctatatatag 6428823  T

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Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 244
Target Start/End: Complemental strand, 25249128 - 25249089
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  25249128 aaaagatcatgaatgagtacaatagtgttcctatatatag 25249089  T

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Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 244
Target Start/End: Complemental strand, 29758242 - 29758203
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  29758242 aaaagataatgaatgagtacaatagtgttcctatatatag 29758203  T

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Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 20957597 - 20957557
Alignment:
Q  171 atagtaactcatagtagagtaaactagatttaacaaaagat 211  Q
    ||||| ||||||||||||||||||||||||| |||||||||    
T  20957597 atagtgactcatagtagagtaaactagatttgacaaaagat 20957557  T

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Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 20957769 - 20957729
Alignment:
Q  171 atagtaactcatagtagagtaaactagatttaacaaaagat 211  Q
    ||||| ||||||||||||||||||||||||| |||||||||    
T  20957769 atagtgactcatagtagagtaaactagatttgacaaaagat 20957729  T

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Target: scaffold0057 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 244
Target Start/End: Complemental strand, 58908 - 58869
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  58908 aaaagatgatgaatgagtacaatagtgttcctatatatag 58869  T

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Target: chr3 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 244
Target Start/End: Complemental strand, 1140123 - 1140084
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatatag 244  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  1140123 aaaagatgatgaatgagtacaatagtgttcctatatatag 1140084  T

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Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 17402891 - 17402929
Alignment:
Q  205 aaaagataatgaatgaatacaatagtgttcctatatata 243  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  17402891 aaaagatattgaatgagtacaatagtgttcctatatata 17402929  T

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Target: scaffold0289 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 46
Target Start/End: Original strand, 19879 - 19907
Alignment:
Q  18 aaaacagccaaaagtgtacacacttcatg 46  Q
    |||||||||||||||||||||||||||||    
T  19879 aaaacagccaaaagtgtacacacttcatg 19907  T

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