View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12701_high_16 (Length: 303)
Name: NF12701_high_16
Description: NF12701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12701_high_16 |
 | |
|
| [»] chr6 (10 HSPs) |
| |
|
| [»] scaffold1207 (1 HSPs) |
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|
Alignment Details
Target: chr6 (Bit Score: 270; Significance: 1e-151; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 22 - 303
Target Start/End: Complemental strand, 11170962 - 11170681
Alignment:
| Q |
22 |
ccttggatcaacagtgaaggatgttgttataactgtgcctgcatactttaatgactcacaacgccagtctactcgagatgcgggtgctattgctggcctc |
121 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11170962 |
ccttggatcaatagtggaggatgttgttataactgtgcctgcatactttaatgactcacaacgccagtctactcgagatgcgggtgctattgctggcctc |
11170863 |
T |
|
| Q |
122 |
aatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgacttgaaaccatttaatcatggatgtagaaatgttttcatttttg |
221 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11170862 |
aatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgacttgaaaccatttaatcatggatgtagaaatgttttcatttttg |
11170763 |
T |
|
| Q |
222 |
acttaggtggtggtactttggacgtgtctgttctcacatttgagaatggtgatatcaatgttaaggccactggaggagacac |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11170762 |
acttaggtggtggtactttggacgtgtctgttctcacatttgagaatggtgatatcaatgttaaggccactggaggagacac |
11170681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 22 - 303
Target Start/End: Complemental strand, 11209784 - 11209503
Alignment:
| Q |
22 |
ccttggatcaacagtgaaggatgttgttataactgtgcctgcatactttaatgactcacaacgccagtctactcgagatgcgggtgctattgctggcctc |
121 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11209784 |
ccttggatcaacagtggatgatgttgttataactgtgcctgcatactttaatgactcacaacgccagtctactcgagatgcgggtgctattgctggcctc |
11209685 |
T |
|
| Q |
122 |
aatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgacttgaaaccatttaatcatggatgtagaaatgttttcatttttg |
221 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
11209684 |
aatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggctttggcatgaaaccatttaatcatggacgtagaaatgttttcatatttg |
11209585 |
T |
|
| Q |
222 |
acttaggtggtggtactttggacgtgtctgttctcacatttgagaatggtgatatcaatgttaaggccactggaggagacac |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | || ||||||||| |
|
|
| T |
11209584 |
acttaggtggtggtactttggacgtgtctgttctcacatttgaggatggtgatatcaatgttaaggctattgcaggagacac |
11209503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 22 - 303
Target Start/End: Complemental strand, 11276346 - 11276065
Alignment:
| Q |
22 |
ccttggatcaacagtgaaggatgttgttataactgtgcctgcatactttaatgactcacaacgccagtctactcgagatgcgggtgctattgctggcctc |
121 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11276346 |
ccttggattaacagtggaggatgttgttataactgtgcctgcatactttaatgactcacagcgccagtctactcgagatgcgggtgctattgctggccta |
11276247 |
T |
|
| Q |
122 |
aatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgacttgaaaccatttaatcatggatgtagaaatgttttcatttttg |
221 |
Q |
| |
|
|| |||||||||||| | ||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
11276246 |
aacgttatgcgaataataaatgagcctactgcagctgcaattgcatatggctttaacacgaaaccatttaatcatggatgtagaaatgttttcatatttg |
11276147 |
T |
|
| Q |
222 |
acttaggtggtggtactttggacgtgtctgttctcacatttgagaatggtgatatcaatgttaaggccactggaggagacac |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
11276146 |
acttaggtggtggtactttggacgtgtctgttctcacttttgagaatggtgatatcaatgttaaggccattggaggagacac |
11276065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 13 - 303
Target Start/End: Complemental strand, 11197124 - 11196834
Alignment:
| Q |
13 |
tgaagcttaccttggatcaacagtgaaggatgttgttataactgtgcctgcatactttaatgactcacaacgccagtctactcgagatgcgggtgctatt |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
11197124 |
tgaagcttaccttggatcaacagtgaaggatgttgttataactgtgcctgcttactttaatgactcacaacgccagtccactcgagatgcgggtgttatt |
11197025 |
T |
|
| Q |
113 |
gctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgacttgaaaccatttaatcatggatgtagaaatgttt |
212 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||| |||||||||||||||||| |||||| |
|
|
| T |
11197024 |
gctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgacatgaaaccttttaatcatggatgtagacatgttt |
11196925 |
T |
|
| Q |
213 |
tcatttttgacttaggtggtggtactttggacgtgtctgttctcacatttgagaatggtgatatcaatgttaaggccactggaggagacac |
303 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||||||| |||||||||||||||| |||| ||||||||||||||| | || ||||||||| |
|
|
| T |
11196924 |
tcatttttgatttaggtggtggtactctggacgtgtccattctcacatttgagaacggtgctatcaatgttaaggcgattgcaggagacac |
11196834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 303
Target Start/End: Complemental strand, 11156671 - 11156381
Alignment:
| Q |
13 |
tgaagcttaccttggatcaacagtgaaggatgttgttataactgtgcctgcatactttaatgactcacaacgccagtctactcgagatgcgggtgctatt |
112 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || | ||||||||||| |||| |
|
|
| T |
11156671 |
tgaagtttaccttggatcaacagtgaaggatgttgttataactgtgcctgcttactttaatgactcacaacgccagtccacccaagatgcgggtgttatt |
11156572 |
T |
|
| Q |
113 |
gctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgacttgaaaccatttaatcatggatgtagaaatgttt |
212 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||| |||||||||||||||| | |||||| |
|
|
| T |
11156571 |
gctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgacatgaaaccttttaatcatggatgtaaacatgttt |
11156472 |
T |
|
| Q |
213 |
tcatttttgacttaggtggtggtactttggacgtgtctgttctcacatttgagaatggtgatatcaatgttaaggccactggaggagacac |
303 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||| | || ||||||||| |
|
|
| T |
11156471 |
tcatttttgatttaggaggtggtactttggacgtgtccattctcacatttgagaaaggtgctatcaatgttaaggcgattgcaggagacac |
11156381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 13 - 303
Target Start/End: Complemental strand, 11200293 - 11199999
Alignment:
| Q |
13 |
tgaagcttaccttggatcaacagtgaaggatgttgttataactgtgcctgcatactttaatgactcacaacg----ccagtctactcgagatgcgggtgc |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||| |||||||||| ||||||||||||| |
|
|
| T |
11200293 |
tgaagcttaccttggatcaacagtgaaggatgttgttataattgtgcctacatactttaatgattcacaacgtacgccagtctacttgagatgcgggtgc |
11200194 |
T |
|
| Q |
109 |
tattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgacttgaaaccatttaatcatggatgtagaaat |
208 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
11200193 |
tattgctggcctcaatgttttgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgacatgaaaccttttaatcatggatgtagaaat |
11200094 |
T |
|
| Q |
209 |
gttttcatttttgacttaggtggtggtactttggacgtgtctgttctcacatttgagaatggtgatatcaatgttaaggccactggaggagacac |
303 |
Q |
| |
|
|||||||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||| | || ||||||||| |
|
|
| T |
11200093 |
gttttcattttttatttaggtggtggtactctggatgtgtccattctcacatttgagaatggtgctatcaatgttaaggcgattgcaggagacac |
11199999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 13 - 288
Target Start/End: Original strand, 11241213 - 11241488
Alignment:
| Q |
13 |
tgaagcttaccttggatcaacagtgaaggatgttgttataactgtgcctgcatactttaatgactcacaacgccagtctactcgagatgcgggtgctatt |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
11241213 |
tgaagcttaccttggatcaacagtgaaggatgttgttataactgtgcctgcttactttaatgactcacaacgccagtctattcgagatgcgggtgctatt |
11241312 |
T |
|
| Q |
113 |
gctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgacttgaaaccatttaatcatggatgtagaaatgttt |
212 |
Q |
| |
|
||||||||||| ||| || ||||| ||| |||||||||||||| ||||||||||||||||||| || ||||| | ||||||||||||||||| ||||| |
|
|
| T |
11241313 |
gctggcctcaaagttttgtgaataatcactgagcctactgcagttgcaattgcatatggccttaacatgaaaactcttaatcatggatgtagacatgttc |
11241412 |
T |
|
| Q |
213 |
tcatttttgacttaggtggtggtactttggacgtgtctgttctcacatttgagaatggtgatatcaatgttaaggc |
288 |
Q |
| |
|
| ||||| || ||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
11241413 |
taattttcgatttaggtggtggtactctggacgtgtccattctcacatttgagaatggtgctatcaatgttaaggc |
11241488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 13 - 303
Target Start/End: Complemental strand, 11161550 - 11161248
Alignment:
| Q |
13 |
tgaagcttaccttggatcaacagtgaaggatgttgttataactgtgcctgcatactttaatgactcacaacg----ccagtctactcgagatgcgggtgc |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
11161550 |
tgaagcttaccttggatcaacagtgaaggatgttgttataattgtgcctacatactttaatgtttcacaacgtacgccagtctactcgagatgcgggtgc |
11161451 |
T |
|
| Q |
109 |
tattgctggcctcaatgttatgcgaatactcaatga--------gcctactgcagctgcaattgcatatggccttgacttgaaaccatttaatcatggat |
200 |
Q |
| |
|
||||| |||||| |||||||||||| || ||||||| ||||||||||| ||||||||||||||| |||||| ||||||| ||||||||||||| |
|
|
| T |
11161450 |
tattgttggccttaatgttatgcgagtaatcaatgactctactagcctactgcagatgcaattgcatatggtcttgacatgaaaccttttaatcatggat |
11161351 |
T |
|
| Q |
201 |
gtagaaatgttttcatttttgacttaggtggtggtactttggacgtgtctgttctcacatttgagaatggtgatatcaatgttaaggccactggaggaga |
300 |
Q |
| |
|
||| | |||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| | || |||||| |
|
|
| T |
11161350 |
gtatacatgttttcattttttatttaggtggtggtactttggacgtgtctattctcacatttgagattggtgctatcaatgttaaggcgattgcaggaga |
11161251 |
T |
|
| Q |
301 |
cac |
303 |
Q |
| |
|
||| |
|
|
| T |
11161250 |
cac |
11161248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 14 - 261
Target Start/End: Complemental strand, 11133394 - 11133147
Alignment:
| Q |
14 |
gaagcttaccttggatcaacagtgaaggatgttgttataactgtgcctgcatactttaatgactcacaacgccagtctactcgagatgcgggtgctattg |
113 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| |||||||| ||||| ||||||| |||| ||||| |
|
|
| T |
11133394 |
gaagtttaccttggatcaacagtgaaggatgtcgttataactgttcctgcttactttaatgactcgcaacgccaagctactagagatgcaggtgttattg |
11133295 |
T |
|
| Q |
114 |
ctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgacttgaaaccatttaatcatggatgtagaaatgtttt |
213 |
Q |
| |
|
| || ||||| |||||||||||| |||| |||||||| |||||||||||||||||||| |||||| |||||| |||||||||| || | ||||||| |
|
|
| T |
11133294 |
caggtctcaacgttatgcgaataatcaacgagcctacagcagctgcaattgcatatggtcttgacaagaaaccgtttaatcatgaccataaacatgtttt |
11133195 |
T |
|
| Q |
214 |
catttttgacttaggtggtggtactttggacgtgtctgttctcacatt |
261 |
Q |
| |
|
||||||| ||||| |||||||| ||||| |||||| |||||||||| |
|
|
| T |
11133194 |
tgtttttgatttaggaggtggtacattggatgtgtctattctcacatt |
11133147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 303
Target Start/End: Original strand, 11314688 - 11314790
Alignment:
| Q |
201 |
gtagaaatgttttcatttttgacttaggtggtggtactttggacgtgtctgttctcacatttgagaatggtgatatcaatgttaaggccactggaggaga |
300 |
Q |
| |
|
|||||||||||||||| || || || ||||| ||||||||||| |||||| |||||||| |||||||||||| ||||| |||| |||| ||| ||||| |
|
|
| T |
11314688 |
gtagaaatgttttcatcttcgatttgggtggcggtactttggatgtgtctattctcacacttgagaatggtgccatcaaagttagggccgttggcggaga |
11314787 |
T |
|
| Q |
301 |
cac |
303 |
Q |
| |
|
||| |
|
|
| T |
11314788 |
cac |
11314790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1207 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: scaffold1207
Description:
Target: scaffold1207; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 22 - 303
Target Start/End: Complemental strand, 1277 - 999
Alignment:
| Q |
22 |
ccttggatcaacagtgaaggatgttgttataactgtgcctgcatactttaatgactcacaacgccagtctactcgagatgcgggtgctattgctggcctc |
121 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
1277 |
ccttggatcaacagtggaggatgttgttataactgtgcctgcatactttaatgactcacaacgccaatctactcgagatgcaggtgctattgctggcctc |
1178 |
T |
|
| Q |
122 |
aatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgacttgaaaccatttaatcatggatgtagaaatgttttcatttttg |
221 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||| |||||||||||||||||||| |
|
|
| T |
1177 |
aatgttttgggaatactcaatgagcctactgcagctgcaattgcatatggctttgacacaaaaccat---cacatggacatagaaatgttttcatttttg |
1081 |
T |
|
| Q |
222 |
acttaggtggtggtactttggacgtgtctgttctcacatttgagaatggtgatatcaatgttaaggccactggaggagacac |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | || ||||||||| |
|
|
| T |
1080 |
acttaggtggtggtactttggacgtgtctgttctcaaatttgagaatggtgatatcaatgttaaggctattgtaggagacac |
999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 8382727 - 8382805
Alignment:
| Q |
97 |
agatgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggcctt |
175 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| ||||| ||| |||||||||| ||||| ||||| |||||||||||||| |
|
|
| T |
8382727 |
agatgctggtgcgattgctggcctcaatgtaatgcggataatcaatgagccaactgccgctgctcttgcatatggcctt |
8382805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 8602291 - 8602213
Alignment:
| Q |
97 |
agatgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggcctt |
175 |
Q |
| |
|
|||||| ||||| |||||||| |||||||| ||||| ||| |||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
8602291 |
agatgctggtgccattgctggtctcaatgtaatgcggataatcaatgagccaactgcagctgctcttgcatatggcctt |
8602213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 13333307 - 13333388
Alignment:
| Q |
97 |
agatgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
178 |
Q |
| |
|
|||||| ||||||||||||||||| ||| | || |||||| ||||||| |||||||| || || |||||||||||||||||| |
|
|
| T |
13333307 |
agatgctggtgctattgctggccttaatatcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgac |
13333388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 10494226 - 10494306
Alignment:
| Q |
98 |
gatgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
178 |
Q |
| |
|
||||| ||||||||||||||||| ||||| || || ||| ||||||| |||||||| || || |||||||||||||||||| |
|
|
| T |
10494226 |
gatgctggtgctattgctggccttaatgtcattcggataatcaatgaacctactgctgcagctattgcatatggccttgac |
10494306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 8585558 - 8585638
Alignment:
| Q |
98 |
gatgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
178 |
Q |
| |
|
||||| ||||| ||||||||||| ||||||||| | ||| ||||||| || ||||| || || |||||||||||||||||| |
|
|
| T |
8585558 |
gatgctggtgccattgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttgac |
8585638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 8628847 - 8628768
Alignment:
| Q |
99 |
atgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
178 |
Q |
| |
|
|||| ||||| ||||||||||| ||||||||| | ||| ||||||| || ||||| || || |||||||||||||||||| |
|
|
| T |
8628847 |
atgctggtgccattgctggccttaatgttatgaggataatcaatgaccccactgctgcagctattgcatatggccttgac |
8628768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 27830733 - 27830807
Alignment:
| Q |
104 |
ggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
178 |
Q |
| |
|
||||| ||||||||||| ||||||||||| ||| | | ||||||||||| || || |||||||||||||||||| |
|
|
| T |
27830733 |
ggtgccattgctggccttaatgttatgcggataataagcgagcctactgctgcagctattgcatatggccttgac |
27830807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 29577532 - 29577594
Alignment:
| Q |
109 |
tattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatgg |
171 |
Q |
| |
|
|||||||||||||||||| ||||| ||| ||||||| || ||||| |||||| |||||||||| |
|
|
| T |
29577532 |
tattgctggcctcaatgtaatgcggataatcaatgaaccaactgctgctgcacttgcatatgg |
29577594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 8654767 - 8654686
Alignment:
| Q |
97 |
agatgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
178 |
Q |
| |
|
|||||| ||||| |||||||| || || || || || ||||||||||| |||||||| || || |||||||||||||||||| |
|
|
| T |
8654767 |
agatgctggtgccattgctggacttaacgtcattcggatactcaatgaacctactgccgcagctattgcatatggccttgac |
8654686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 8667736 - 8667655
Alignment:
| Q |
97 |
agatgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
178 |
Q |
| |
|
|||||| ||| |||||||||| || ||||| || || ||| ||||||| |||||||| || || |||||||||||||||||| |
|
|
| T |
8667736 |
agatgctggtactattgctggacttaatgtcattcggataatcaatgaacctactgcggcagctattgcatatggccttgac |
8667655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 6789829 - 6789749
Alignment:
| Q |
97 |
agatgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttga |
177 |
Q |
| |
|
|||||| ||||| |||||||| || |||||||| |||||| ||||||| || || || ||||| |||||||||||||||| |
|
|
| T |
6789829 |
agatgctggtgccattgctggtcttaatgttatacgaataatcaatgaaccaacagctgctgctcttgcatatggccttga |
6789749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 8671482 - 8671562
Alignment:
| Q |
98 |
gatgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
178 |
Q |
| |
|
||||| ||| |||||||||| || ||||| || || ||| ||||||| |||||||| || || |||||||||||||||||| |
|
|
| T |
8671482 |
gatgctggtactattgctggacttaatgtcattcggataatcaatgaacctactgctgcagctattgcatatggccttgac |
8671562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 3147589 - 3147515
Alignment:
| Q |
97 |
agatgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatgg |
171 |
Q |
| |
|
|||||| |||| |||||||||||| ||| ||||||| ||| ||||||| |||||||| || || ||||| ||||| |
|
|
| T |
3147589 |
agatgctggtgttattgctggccttaatattatgcggataatcaatgaacctactgctgcagctattgcgtatgg |
3147515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 7877584 - 7877662
Alignment:
| Q |
97 |
agatgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggcctt |
175 |
Q |
| |
|
|||||| ||||| |||| ||||||||||||||||| ||| | ||||| || ||||| ||||| |||||||||||||| |
|
|
| T |
7877584 |
agatgctggtgcagttgccggcctcaatgttatgcggataattaatgaaccaactgctgctgcccttgcatatggcctt |
7877662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 8538353 - 8538275
Alignment:
| Q |
97 |
agatgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggcctt |
175 |
Q |
| |
|
|||||| |||| ||||||||||||||||| ||||| ||| ||||||| ||||| || ||||| ||||||| |||||| |
|
|
| T |
8538353 |
agatgctggtgtcattgctggcctcaatgtaatgcggataatcaatgaacctacagctgctgctcttgcatacggcctt |
8538275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 37; Significance: 0.000000000007; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 9335742 - 9335822
Alignment:
| Q |
97 |
agatgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttga |
177 |
Q |
| |
|
|||||| ||| ||||||||||||| ||||| || || ||| ||||||| |||||||| || || ||||||||||||||||| |
|
|
| T |
9335742 |
agatgctggtactattgctggccttaatgtcattcggataatcaatgaacctactgctgcagctattgcatatggccttga |
9335822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 30775568 - 30775489
Alignment:
| Q |
98 |
gatgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttga |
177 |
Q |
| |
|
||||| ||||| |||||||| || ||||||||| ||||| | |||||||| |||||||| || ||||||||||| ||||| |
|
|
| T |
30775568 |
gatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatggacttga |
30775489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 35132765 - 35132684
Alignment:
| Q |
97 |
agatgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
178 |
Q |
| |
|
|||||| |||||||||||||| | |||||||||| || || | ||||| |||||||| || || ||||||||||||||||| |
|
|
| T |
35132765 |
agatgctggtgctattgctggtcccaatgttatgagagtaatgaatgaacctactgccgcagcggttgcatatggccttgac |
35132684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 34; Significance: 0.0000000004; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 7542543 - 7542462
Alignment:
| Q |
97 |
agatgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
178 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| | | | ||||| |||||||| || || ||||||||||||||||| |
|
|
| T |
7542543 |
agatgcgggtgccattgctggcctcaatgttatgagggcaatgaatgaacctactgccgcagctgttgcatatggccttgac |
7542462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 16661844 - 16661924
Alignment:
| Q |
98 |
gatgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
178 |
Q |
| |
|
||||| ||||| ||||||||||| || ||| || | ||| ||||||| || |||||||| || |||||||||||||||||| |
|
|
| T |
16661844 |
gatgctggtgccattgctggccttaacgttgtgaggataatcaatgaacccactgcagcagctattgcatatggccttgac |
16661924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 16657368 - 16657449
Alignment:
| Q |
97 |
agatgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
178 |
Q |
| |
|
|||||| ||||| || |||||||| ||||| || ||||| ||||||| |||||||| || || ||||||||||| |||||| |
|
|
| T |
16657368 |
agatgctggtgccatcgctggccttaatgtcattcgaattatcaatgaacctactgctgcagctattgcatatggtcttgac |
16657449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 14703724 - 14703644
Alignment:
| Q |
98 |
gatgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
178 |
Q |
| |
|
||||| |||| |||||| ||||||||||||||| | || | ||||| ||||| || || || |||||||||||||||||| |
|
|
| T |
14703724 |
gatgctggtgttattgccggcctcaatgttatgagggtaatgaatgaacctacagctgcagctattgcatatggccttgac |
14703644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 34466645 - 34466725
Alignment:
| Q |
98 |
gatgcgggtgctattgctggcctcaatgttatgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
178 |
Q |
| |
|
||||| ||| ||||||||||||| |||||| ||| |||| ||||||| || ||||| || || ||||||||||| |||||| |
|
|
| T |
34466645 |
gatgctggtactattgctggccttaatgttttgcaaataatcaatgaacccactgctgcagctattgcatatggacttgac |
34466725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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