View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12701_high_9 (Length: 352)
Name: NF12701_high_9
Description: NF12701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12701_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 10 - 338
Target Start/End: Original strand, 23035425 - 23035753
Alignment:
| Q |
10 |
caaaggtatgtttccttttactta-gaataatgaattttcatattgataataaaatttgagtatgagaaaagatgatagnnnnnnngtgtctatgggagg |
108 |
Q |
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| T |
23035425 |
caaaggtatgtttccttttacttaagaatgatgaattttcatattgataataaaatttgagtatgagaaaagatgatagttttct-gtgtctatgggagg |
23035523 |
T |
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| Q |
109 |
tagagtggtgttaagtagtttaagaaaaggttttgaatgaataacttcaaattcaaagcaagttcctttgagtggaggagtggnnnnnnnnnnttaattg |
208 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||| |
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| T |
23035524 |
tagagtggtgttaagtagtttaagaaaaggttttgaatgaataactttaaattcaaagcaagttcctttgagtggaggattggaaaaaaaaaattaattg |
23035623 |
T |
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| Q |
209 |
ggtgagctggaagagggaggcctttgattgaaaaatattccactttttcatttagatttaaatatgtcattggtccttgcatttagttaaagttttgttt |
308 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||||||| |
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| T |
23035624 |
ggtgagttggaagagggaggcctttgattgaaaaatattccactttttaatttaggtttaaatatatcattgatccttgcatttagttaaagttttgttt |
23035723 |
T |
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| Q |
309 |
ttggtccttctgttaagtttaagttataaa |
338 |
Q |
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||| ||||||||||||||| |||||||||| |
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| T |
23035724 |
ttgatccttctgttaagttcaagttataaa |
23035753 |
T |
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