View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12701_low_22 (Length: 279)

Name: NF12701_low_22
Description: NF12701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12701_low_22
NF12701_low_22
[»] chr7 (30 HSPs)
chr7 (14-61)||(7133288-7133335)
chr7 (14-61)||(18233608-18233655)
chr7 (23-61)||(23930230-23930268)
chr7 (22-58)||(12278845-12278881)
chr7 (22-58)||(43250003-43250039)
chr7 (22-57)||(2424624-2424659)
chr7 (16-59)||(10230085-10230128)
chr7 (23-58)||(17307904-17307939)
chr7 (22-57)||(29787383-29787418)
chr7 (22-61)||(30813822-30813861)
chr7 (20-58)||(5548684-5548722)
chr7 (20-58)||(9482942-9482980)
chr7 (22-56)||(21880162-21880196)
chr7 (22-56)||(27945051-27945085)
chr7 (25-58)||(22602723-22602756)
chr7 (22-55)||(30731047-30731080)
chr7 (22-55)||(32308130-32308163)
chr7 (22-58)||(1401035-1401071)
chr7 (26-58)||(5835261-5835293)
chr7 (22-58)||(7328704-7328740)
chr7 (22-58)||(16341506-16341542)
chr7 (22-58)||(17851441-17851477)
chr7 (22-58)||(19930954-19930990)
chr7 (22-58)||(19992011-19992047)
chr7 (22-58)||(20549801-20549837)
chr7 (22-58)||(22868052-22868088)
chr7 (22-58)||(27732252-27732288)
chr7 (22-54)||(30730935-30730967)
chr7 (22-54)||(38134423-38134455)
chr7 (22-54)||(44172907-44172939)
[»] chr6 (29 HSPs)
chr6 (14-61)||(7569178-7569225)
chr6 (22-61)||(34446575-34446614)
chr6 (22-58)||(7265606-7265642)
chr6 (14-54)||(9024193-9024233)
chr6 (22-58)||(9025507-9025543)
chr6 (22-58)||(9195767-9195803)
chr6 (22-58)||(19040362-19040398)
chr6 (22-61)||(12235529-12235568)
chr6 (23-58)||(13360385-13360420)
chr6 (22-61)||(19602191-19602230)
chr6 (22-57)||(31579239-31579274)
chr6 (24-58)||(11591883-11591917)
chr6 (24-58)||(26562701-26562735)
chr6 (22-56)||(28715305-28715339)
chr6 (22-58)||(1532250-1532286)
chr6 (22-58)||(2140494-2140530)
chr6 (22-58)||(5462696-5462732)
chr6 (22-58)||(7086805-7086841)
chr6 (22-58)||(7996391-7996427)
chr6 (22-58)||(8022374-8022410)
chr6 (22-58)||(9617444-9617480)
chr6 (22-58)||(9629393-9629429)
chr6 (22-58)||(9658889-9658925)
chr6 (22-58)||(13851746-13851782)
chr6 (22-58)||(16388246-16388282)
chr6 (22-58)||(17341677-17341713)
chr6 (22-58)||(30866157-30866193)
chr6 (22-58)||(32511679-32511715)
chr6 (22-58)||(34073360-34073396)
[»] chr8 (28 HSPs)
chr8 (22-61)||(3025561-3025600)
chr8 (22-58)||(4611544-4611580)
chr8 (22-58)||(7658473-7658509)
chr8 (22-58)||(13203651-13203687)
chr8 (22-58)||(14134709-14134745)
chr8 (22-58)||(34201059-34201095)
chr8 (22-58)||(34897095-34897131)
chr8 (22-58)||(44067526-44067562)
chr8 (19-54)||(10441210-10441245)
chr8 (14-61)||(14692462-14692508)
chr8 (18-61)||(22850350-22850393)
chr8 (22-61)||(28883888-28883927)
chr8 (22-60)||(40063961-40063999)
chr8 (22-56)||(40332201-40332235)
chr8 (22-58)||(4786351-4786387)
chr8 (18-54)||(7616866-7616902)
chr8 (22-58)||(11803269-11803305)
chr8 (22-58)||(11927099-11927135)
chr8 (22-54)||(12559123-12559155)
chr8 (22-58)||(13844609-13844645)
chr8 (22-58)||(14731722-14731758)
chr8 (22-58)||(20679408-20679444)
chr8 (22-58)||(24362215-24362251)
chr8 (22-54)||(29198496-29198528)
chr8 (22-54)||(30068045-30068077)
chr8 (22-58)||(31236590-31236626)
chr8 (22-58)||(33382032-33382068)
chr8 (22-58)||(39954292-39954328)
[»] chr5 (30 HSPs)
chr5 (22-61)||(28588684-28588723)
chr5 (14-56)||(24906316-24906358)
chr5 (22-58)||(6471902-6471938)
chr5 (25-61)||(23015999-23016035)
chr5 (22-58)||(25863214-25863250)
chr5 (22-54)||(31264448-31264480)
chr5 (22-61)||(5467988-5468027)
chr5 (20-55)||(19438351-19438386)
chr5 (23-58)||(24273043-24273078)
chr5 (23-58)||(24389136-24389171)
chr5 (26-61)||(26205770-26205805)
chr5 (20-58)||(18421854-18421892)
chr5 (23-61)||(21194133-21194171)
chr5 (22-56)||(27932245-27932279)
chr5 (23-56)||(6326312-6326345)
chr5 (22-59)||(30098336-30098373)
chr5 (25-58)||(41091270-41091303)
chr5 (22-54)||(2577197-2577229)
chr5 (22-58)||(3966513-3966549)
chr5 (22-54)||(4344752-4344784)
chr5 (22-58)||(7997179-7997215)
chr5 (22-54)||(11596472-11596504)
chr5 (22-58)||(17593735-17593771)
chr5 (22-54)||(18162065-18162097)
chr5 (22-58)||(30502401-30502437)
chr5 (22-58)||(30542744-30542780)
chr5 (22-58)||(35017047-35017083)
chr5 (22-58)||(36838553-36838589)
chr5 (22-58)||(38749576-38749612)
chr5 (24-56)||(41558669-41558701)
[»] chr4 (26 HSPs)
chr4 (22-61)||(20743288-20743327)
chr4 (22-61)||(24343517-24343556)
chr4 (22-61)||(31243558-31243597)
chr4 (22-57)||(32910561-32910596)
chr4 (19-57)||(26276023-26276061)
chr4 (22-58)||(903932-903968)
chr4 (22-58)||(8423731-8423767)
chr4 (17-61)||(19230319-19230363)
chr4 (22-58)||(22440613-22440649)
chr4 (22-58)||(36635334-36635370)
chr4 (22-61)||(7012076-7012115)
chr4 (22-61)||(36386221-36386260)
chr4 (20-58)||(18576050-18576088)
chr4 (22-56)||(21945513-21945547)
chr4 (20-57)||(2234258-2234295)
chr4 (22-59)||(6273954-6273991)
chr4 (24-57)||(16189721-16189754)
chr4 (22-54)||(5654608-5654640)
chr4 (22-58)||(5775371-5775407)
chr4 (22-58)||(9996850-9996886)
chr4 (22-54)||(10546158-10546190)
chr4 (22-54)||(18513258-18513290)
chr4 (22-58)||(37698722-37698758)
chr4 (26-58)||(40613464-40613496)
chr4 (22-54)||(46180953-46180985)
chr4 (22-58)||(54580036-54580072)
[»] chr3 (27 HSPs)
chr3 (14-53)||(16789668-16789707)
chr3 (17-54)||(21149072-21149109)
chr3 (22-58)||(16192763-16192799)
chr3 (22-54)||(20691329-20691361)
chr3 (22-58)||(24205054-24205090)
chr3 (14-54)||(34189429-34189469)
chr3 (22-61)||(1830353-1830392)
chr3 (22-61)||(3730175-3730214)
chr3 (22-57)||(11251988-11252023)
chr3 (22-61)||(25652041-25652080)
chr3 (22-56)||(20503475-20503509)
chr3 (22-60)||(25074799-25074837)
chr3 (22-58)||(7928460-7928496)
chr3 (22-58)||(8039848-8039884)
chr3 (22-58)||(8383267-8383303)
chr3 (22-58)||(8789563-8789599)
chr3 (22-58)||(9624651-9624687)
chr3 (22-58)||(10690275-10690311)
chr3 (22-58)||(11313813-11313849)
chr3 (22-58)||(11493374-11493410)
chr3 (22-58)||(12704017-12704053)
chr3 (22-58)||(14840304-14840340)
chr3 (22-58)||(15812834-15812870)
chr3 (22-58)||(25948900-25948936)
chr3 (22-58)||(32804553-32804589)
chr3 (22-58)||(34307793-34307829)
chr3 (22-58)||(49505167-49505203)
[»] chr1 (29 HSPs)
chr1 (22-61)||(36878471-36878510)
chr1 (22-61)||(40747783-40747822)
chr1 (20-58)||(19324570-19324608)
chr1 (20-58)||(25098568-25098606)
chr1 (20-58)||(25361894-25361932)
chr1 (22-58)||(1864893-1864929)
chr1 (22-58)||(7918224-7918260)
chr1 (22-58)||(34298446-34298482)
chr1 (22-58)||(40181881-40181917)
chr1 (22-58)||(44482240-44482276)
chr1 (22-61)||(398775-398814)
chr1 (22-61)||(22794088-22794127)
chr1 (22-61)||(24176377-24176416)
chr1 (22-61)||(39101192-39101231)
chr1 (22-61)||(42004957-42004996)
chr1 (22-53)||(42325570-42325601)
chr1 (22-56)||(31015053-31015087)
chr1 (22-55)||(12443476-12443509)
chr1 (22-58)||(1486722-1486758)
chr1 (19-47)||(2445877-2445905)
chr1 (22-54)||(3921677-3921709)
chr1 (22-58)||(6427360-6427396)
chr1 (22-58)||(10233263-10233299)
chr1 (22-54)||(11571595-11571627)
chr1 (22-58)||(14332655-14332691)
chr1 (22-54)||(26238129-26238161)
chr1 (22-58)||(28674810-28674846)
chr1 (22-58)||(34712396-34712432)
chr1 (22-58)||(41017417-41017453)
[»] scaffold0044 (1 HSPs)
scaffold0044 (22-58)||(53190-53226)
[»] scaffold0007 (1 HSPs)
scaffold0007 (14-58)||(225281-225325)
[»] chr2 (25 HSPs)
chr2 (22-54)||(10535776-10535808)
chr2 (22-58)||(12668436-12668472)
chr2 (22-58)||(21616772-21616808)
chr2 (22-58)||(23921263-23921299)
chr2 (17-61)||(34007001-34007045)
chr2 (22-61)||(11308014-11308053)
chr2 (22-61)||(12748694-12748733)
chr2 (22-61)||(19573988-19574027)
chr2 (22-57)||(21782832-21782867)
chr2 (14-61)||(23354662-23354709)
chr2 (22-61)||(24011046-24011085)
chr2 (22-61)||(25544491-25544530)
chr2 (22-61)||(30563419-30563458)
chr2 (22-60)||(25846751-25846789)
chr2 (22-55)||(40681992-40682025)
chr2 (22-58)||(5367202-5367238)
chr2 (26-58)||(15909645-15909677)
chr2 (22-54)||(18570982-18571014)
chr2 (22-58)||(23718036-23718072)
chr2 (22-58)||(24105708-24105744)
chr2 (22-58)||(28677919-28677955)
chr2 (22-58)||(35449523-35449559)
chr2 (22-58)||(37411257-37411293)
chr2 (22-58)||(42832289-42832325)
chr2 (22-58)||(44860330-44860366)
[»] scaffold0598 (1 HSPs)
scaffold0598 (22-53)||(8071-8102)
[»] scaffold0123 (1 HSPs)
scaffold0123 (24-58)||(44538-44572)
[»] scaffold0004 (1 HSPs)
scaffold0004 (22-56)||(92817-92851)
[»] scaffold0049 (1 HSPs)
scaffold0049 (17-54)||(56927-56964)
[»] scaffold0050 (1 HSPs)
scaffold0050 (22-58)||(70288-70324)
[»] scaffold0036 (1 HSPs)
scaffold0036 (22-58)||(9760-9796)
[»] scaffold0022 (1 HSPs)
scaffold0022 (22-58)||(90853-90889)
[»] scaffold0020 (1 HSPs)
scaffold0020 (22-58)||(135325-135361)
[»] scaffold0008 (1 HSPs)
scaffold0008 (22-58)||(263385-263421)


Alignment Details
Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 7133335 - 7133288
Alignment:
Q  14 cacagatgataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7133335 cacagatgataatttgagaaaatgacataattcagtgtaatcataggt 7133288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 18233655 - 18233608
Alignment:
Q  14 cacagatgataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||    
T  18233655 cacagatagtaatttgagaaaatgacataattcagtgtaattataggt 18233608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 23930230 - 23930268
Alignment:
Q  23 taatttgagaaaatgacataattcagtgtaattataggt 61  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  23930230 taatttgagaaaatgacataattcagtgtaatcataggt 23930268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 12278845 - 12278881
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||| |||||||||||||||||||||||||||||    
T  12278845 ataatttaagaaaatgacataattcagtgtaattata 12278881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 43250003 - 43250039
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||||||||||| |||||||||||||    
T  43250003 ataatttgagaaaatgacataatacagtgtaattata 43250039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 57
Target Start/End: Original strand, 2424624 - 2424659
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattat 57  Q
    ||||||||||||||| ||||||||||||||||||||    
T  2424624 ataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 10230128 - 10230085
Alignment:
Q  16 cagatgataatttgagaaaatgacataattcagtgtaattatag 59  Q
    ||||| |||||||||| ||||||||||||||||||||| |||||    
T  10230128 cagataataatttgaggaaatgacataattcagtgtaagtatag 10230085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 58
Target Start/End: Original strand, 17307904 - 17307939
Alignment:
Q  23 taatttgagaaaatgacataattcagtgtaattata 58  Q
    |||||||||||||| |||||||||||||||||||||    
T  17307904 taatttgagaaaataacataattcagtgtaattata 17307939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 29787418 - 29787383
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattat 57  Q
    ||||||||||||||| ||||||||||||||||||||    
T  29787418 ataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 30813822 - 30813861
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  30813822 ataatttgagaaaattacataattcagtgtaattacaggt 30813861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 5548684 - 5548722
Alignment:
Q  20 tgataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  5548684 tgataatttgagaaaatcaaataattcagtgtaattata 5548722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 9482942 - 9482980
Alignment:
Q  20 tgataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  9482942 tgataatttgagaaaatcacacaattcagtgtaattata 9482980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 21880162 - 21880196
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaatta 56  Q
    ||||||||||||||| |||||||||||||||||||    
T  21880162 ataatttgagaaaattacataattcagtgtaatta 21880196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 27945051 - 27945085
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaatta 56  Q
    ||||||||||||||| |||||||||||||||||||    
T  27945051 ataatttgagaaaattacataattcagtgtaatta 27945085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 22602756 - 22602723
Alignment:
Q  25 atttgagaaaatgacataattcagtgtaattata 58  Q
    |||||||||||| |||||||||||||||||||||    
T  22602756 atttgagaaaatcacataattcagtgtaattata 22602723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 30731047 - 30731080
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaatt 55  Q
    ||||||||||||||| ||||||||||||||||||    
T  30731047 ataatttgagaaaatcacataattcagtgtaatt 30731080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 32308130 - 32308163
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaatt 55  Q
    ||||||||||||||| ||||||||||||||||||    
T  32308130 ataatttgagaaaatcacataattcagtgtaatt 32308163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 1401035 - 1401071
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  1401035 ataatttgagaaactcacataattcagtgtaattata 1401071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 5835261 - 5835293
Alignment:
Q  26 tttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||| |||||||||||||||||||||    
T  5835261 tttgagaaaataacataattcagtgtaattata 5835293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 7328740 - 7328704
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  7328740 ataatttgagaaaataacataatttagtgtaattata 7328704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 16341506 - 16341542
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  16341506 ataatttgagaaaatcacataattaagtgtaattata 16341542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 17851441 - 17851477
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  17851441 ataattttagaaaatcacataattcagtgtaattata 17851477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 19930990 - 19930954
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  19930990 ataatttgataaaatgacataattcaatgtaattata 19930954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 19992011 - 19992047
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  19992011 ataatttgagaaaatcacatatttcagtgtaattata 19992047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 20549801 - 20549837
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| || ||||||||||||||||||    
T  20549801 ataatttgagaaaatcacgtaattcagtgtaattata 20549837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 22868052 - 22868088
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  22868052 ataatatgagaaaatcacataattcagtgtaattata 22868088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 27732288 - 27732252
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  27732288 ataatttaagaaaattacataattcagtgtaattata 27732252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 30730935 - 30730967
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    ||||||||||||||||||||| |||||||||||    
T  30730935 ataatttgagaaaatgacatagttcagtgtaat 30730967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 38134455 - 38134423
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    |||||||||||||||||||||||||| ||||||    
T  38134455 ataatttgagaaaatgacataattcaatgtaat 38134423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 44172939 - 44172907
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    |||||||||||||||||||||||||| ||||||    
T  44172939 ataatttgagaaaatgacataattcaatgtaat 44172907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 7569225 - 7569178
Alignment:
Q  14 cacagatgataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  7569225 cacagataataatttgagaaaattacataattcagtgtaattataggt 7569178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 34446575 - 34446614
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  34446575 ataatttgagaaaatgacataattcagtgtaatcataggt 34446614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 7265642 - 7265606
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  7265642 ataatttgagaaaatcacataattcagtgtaattata 7265606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 9024233 - 9024193
Alignment:
Q  14 cacagatgataatttgagaaaatgacataattcagtgtaat 54  Q
    |||| ||||||||||||||||||||||||||||| ||||||    
T  9024233 cacaaatgataatttgagaaaatgacataattcaatgtaat 9024193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 9025543 - 9025507
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  9025543 ataatttgagaaaatcacataattcagtgtaattata 9025507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 9195803 - 9195767
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    |||||||||||||||||||||||| ||||||||||||    
T  9195803 ataatttgagaaaatgacataatttagtgtaattata 9195767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 19040362 - 19040398
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  19040362 ataatttgagaaaatcacataattcagtgtaattata 19040398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 12235568 - 12235529
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    |||||| |||||||||||||||||||||||||| ||||||    
T  12235568 ataattagagaaaatgacataattcagtgtaatcataggt 12235529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 13360420 - 13360385
Alignment:
Q  23 taatttgagaaaatgacataattcagtgtaattata 58  Q
    |||||||||||||| |||||||||||||||||||||    
T  13360420 taatttgagaaaatcacataattcagtgtaattata 13360385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 19602230 - 19602191
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||||||||||| ||||||||||||||| ||||||    
T  19602230 ataatttgagaaaatgatataattcagtgtaatcataggt 19602191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 31579274 - 31579239
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattat 57  Q
    ||||||||||||||| ||||||||||||||||||||    
T  31579274 ataatttgagaaaatcacataattcagtgtaattat 31579239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 11591917 - 11591883
Alignment:
Q  24 aatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||| |||||||||||||||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattata 11591883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 58
Target Start/End: Original strand, 26562701 - 26562735
Alignment:
Q  24 aatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||| |||||||||||||||||||||    
T  26562701 aatttgagaaaatcacataattcagtgtaattata 26562735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 28715305 - 28715339
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaatta 56  Q
    ||||||||| |||||||||||||||||||||||||    
T  28715305 ataatttgaaaaaatgacataattcagtgtaatta 28715339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 1532250 - 1532286
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  1532250 ataatttgataaaattacataattcagtgtaattata 1532286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 2140530 - 2140494
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  2140530 ataatttgagaaaatgacataattcaatgtaactata 2140494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 5462696 - 5462732
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  5462696 ataatttgagaaaatcacataattcattgtaattata 5462732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 7086805 - 7086841
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  7086805 ataatttgagaaaatcacataatttagtgtaattata 7086841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 7996427 - 7996391
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| | |||||||||||||||||||    
T  7996427 ataatttgagaaaatcatataattcagtgtaattata 7996391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 8022374 - 8022410
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| | |||||||||||||||||||    
T  8022374 ataatttgagaaaatcatataattcagtgtaattata 8022410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 9617444 - 9617480
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  9617444 ataatttgagaaaatcacataattcaatgtaattata 9617480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 9629393 - 9629429
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  9629393 ataatttgagaaaatcacataattcaatgtaattata 9629429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 9658889 - 9658925
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  9658889 ataatttaagaaaatcacataattcagtgtaattata 9658925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 13851746 - 13851782
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| || ||||||||||||||||||    
T  13851746 ataatttgagaaaataacgtaattcagtgtaattata 13851782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 16388282 - 16388246
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  16388282 ataatttgaaaaaatcacataattcagtgtaattata 16388246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 17341713 - 17341677
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  17341713 ataatttgataaaatcacataattcagtgtaattata 17341677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 30866193 - 30866157
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  30866193 ataatttgagaaaatcacataattcaatgtaattata 30866157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 32511715 - 32511679
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  32511715 ataatttaagaaaatcacataattcagtgtaattata 32511679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 34073396 - 34073360
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    |||||||||||||||  ||||||||||||||||||||    
T  34073396 ataatttgagaaaatctcataattcagtgtaattata 34073360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 3025561 - 3025600
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  3025561 ataatttgagaaaatcacataattcagtgtaattataggt 3025600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 4611544 - 4611580
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  4611544 ataatttgagaaaataacataattcagtgtaattata 4611580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 7658473 - 7658509
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  7658473 ataatttgagaaaattacataattcagtgtaattata 7658509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 13203651 - 13203687
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  13203651 ataatttgagaaaattacataattcagtgtaattata 13203687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 14134709 - 14134745
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  14134709 ataatttgagaaaatcacataattcagtgtaattata 14134745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 34201095 - 34201059
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    |||||||||||||||||||||||||| ||||||||||    
T  34201095 ataatttgagaaaatgacataattcaatgtaattata 34201059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 34897095 - 34897131
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34897095 ataatttgagaaaatcacataattcagtgtaattata 34897131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 44067526 - 44067562
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||||||||||| |||||||||||||    
T  44067526 ataatttgagaaaatgacataatacagtgtaattata 44067562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 10441210 - 10441245
Alignment:
Q  19 atgataatttgagaaaatgacataattcagtgtaat 54  Q
    ||||||||||||||||||||||||||||| ||||||    
T  10441210 atgataatttgagaaaatgacataattcaatgtaat 10441245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 14692462 - 14692508
Alignment:
Q  14 cacagatgataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  14692462 cacagataataatttgagaaa-tgacataattcagtgtaactataggt 14692508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 22850350 - 22850393
Alignment:
Q  18 gatgataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    |||||||||||||||||| ||||||||| | |||||||||||||    
T  22850350 gatgataatttgagaaaaagacataattaaatgtaattataggt 22850393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 28883927 - 28883888
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  28883927 ataatttgagaaaatgacataattcagtggaatcataggt 28883888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 40063961 - 40063999
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattatagg 60  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  40063961 ataatttgagaaaatgacataattcattgtaatcatagg 40063999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 40332201 - 40332235
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaatta 56  Q
    ||||||||||||||| |||||||||||||||||||    
T  40332201 ataatttgagaaaatcacataattcagtgtaatta 40332235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 4786387 - 4786351
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  4786387 ataatttaagaaaatcacataattcagtgtaattata 4786351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 7616902 - 7616866
Alignment:
Q  18 gatgataatttgagaaaatgacataattcagtgtaat 54  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  7616902 gatgataatttgagaaaatgacacaattcaatgtaat 7616866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 11803269 - 11803305
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  11803269 ataatttaagaaaatcacataattcagtgtaattata 11803305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 11927135 - 11927099
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  11927135 ataatttgataaaatcacataattcagtgtaattata 11927099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 12559155 - 12559123
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    ||||||||||||||||| |||||||||||||||    
T  12559155 ataatttgagaaaatgatataattcagtgtaat 12559123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 13844645 - 13844609
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  13844645 ataatttgagaaaatcacataattgagtgtaattata 13844609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 14731722 - 14731758
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  14731722 ataatttgagaaaatcacataatttagtgtaattata 14731758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 20679444 - 20679408
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  20679444 ataatttgagaaaatcacatagttcagtgtaattata 20679408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 24362251 - 24362215
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  24362251 ataatttgagagaatcacataattcagtgtaattata 24362215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 29198528 - 29198496
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    |||||||||||||||||||||||||| ||||||    
T  29198528 ataatttgagaaaatgacataattcaatgtaat 29198496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 30068077 - 30068045
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    |||||||||||||||||||||||||||| ||||    
T  30068077 ataatttgagaaaatgacataattcagtataat 30068045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 31236626 - 31236590
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  31236626 ataatttgagaaaatcacataattcaatgtaattata 31236590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 33382068 - 33382032
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  33382068 ataatttaagaaaatgacataattcagagtaattata 33382032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 39954328 - 39954292
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  39954328 ataatttgagaaaatcacataatttagtgtaattata 39954292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 28588723 - 28588684
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  28588723 ataatttgagaaaatcacataattcagtgtaattataggt 28588684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 24906358 - 24906316
Alignment:
Q  14 cacagatgataatttgagaaaatgacataattcagtgtaatta 56  Q
    ||||||| ||||||||| |||||||||||||||||||||||||    
T  24906358 cacagataataatttgaaaaaatgacataattcagtgtaatta 24906316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 6471938 - 6471902
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  6471938 ataatttgagaaaatcacataattcagtgtaattata 6471902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 23016035 - 23015999
Alignment:
Q  25 atttgagaaaatgacataattcagtgtaattataggt 61  Q
    |||||||||||| ||||||||||||||||||||||||    
T  23016035 atttgagaaaatcacataattcagtgtaattataggt 23015999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 25863214 - 25863250
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||||| |||||||||||||||||||    
T  25863214 ataatttgagaaaatgatataattcagtgtaattata 25863250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 31264448 - 31264480
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    |||||||||||||||||||||||||||||||||    
T  31264448 ataatttgagaaaatgacataattcagtgtaat 31264480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 5468027 - 5467988
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  5468027 ataatttgataaaatcacataattcagtgtaattataggt 5467988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 19438351 - 19438386
Alignment:
Q  20 tgataatttgagaaaatgacataattcagtgtaatt 55  Q
    ||||||||||||||||| ||||||||||||||||||    
T  19438351 tgataatttgagaaaatcacataattcagtgtaatt 19438386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 24273078 - 24273043
Alignment:
Q  23 taatttgagaaaatgacataattcagtgtaattata 58  Q
    |||||||||||||| |||||||||||||||||||||    
T  24273078 taatttgagaaaatcacataattcagtgtaattata 24273043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 58
Target Start/End: Original strand, 24389136 - 24389171
Alignment:
Q  23 taatttgagaaaatgacataattcagtgtaattata 58  Q
    |||||||||||||| |||||||||||||||||||||    
T  24389136 taatttgagaaaatcacataattcagtgtaattata 24389171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 26205805 - 26205770
Alignment:
Q  26 tttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||||||||||||||||||||||| ||||||    
T  26205805 tttgagaaaatgacataattcagtgtaatcataggt 26205770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 18421892 - 18421854
Alignment:
Q  20 tgataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  18421892 tgataatttgagaaaatcacataatccagtgtaattata 18421854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 21194171 - 21194133
Alignment:
Q  23 taatttgagaaaatgacataattcagtgtaattataggt 61  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  21194171 taatttgagaaaatcacatcattcagtgtaattataggt 21194133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 27932245 - 27932279
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaatta 56  Q
    ||||||||||||||| |||||||||||||||||||    
T  27932245 ataatttgagaaaattacataattcagtgtaatta 27932279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 6326345 - 6326312
Alignment:
Q  23 taatttgagaaaatgacataattcagtgtaatta 56  Q
    |||||||||||||| |||||||||||||||||||    
T  6326345 taatttgagaaaattacataattcagtgtaatta 6326312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 30098336 - 30098373
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattatag 59  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  30098336 ataatttgagaaaatcacataattcaatgtaattatag 30098373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 41091303 - 41091270
Alignment:
Q  25 atttgagaaaatgacataattcagtgtaattata 58  Q
    |||||||||||| |||||||||||||||||||||    
T  41091303 atttgagaaaatcacataattcagtgtaattata 41091270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 2577229 - 2577197
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    |||||||||||||||||||||||| ||||||||    
T  2577229 ataatttgagaaaatgacataatttagtgtaat 2577197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 3966513 - 3966549
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  3966513 ataatttgagaaaatcacacaattcagtgtaattata 3966549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 4344752 - 4344784
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    ||||||||| |||||||||||||||||||||||    
T  4344752 ataatttgaaaaaatgacataattcagtgtaat 4344784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 7997215 - 7997179
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  7997215 ataatttgagaaaatgatataatacagtgtaattata 7997179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 11596504 - 11596472
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    |||||||||||||||||||||||||| ||||||    
T  11596504 ataatttgagaaaatgacataattcaatgtaat 11596472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 17593771 - 17593735
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| || ||||||||||||||||||    
T  17593771 ataatttgagaaaatcacgtaattcagtgtaattata 17593735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 18162065 - 18162097
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    ||||||| |||||||||||||||||||||||||    
T  18162065 ataatttaagaaaatgacataattcagtgtaat 18162097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 30502437 - 30502401
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| || ||||||||||||||||||    
T  30502437 ataatttgagaaaatcacttaattcagtgtaattata 30502401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 30542780 - 30542744
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| || ||||||||||||||||||    
T  30542780 ataatttgagaaaatcacttaattcagtgtaattata 30542744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 35017047 - 35017083
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  35017047 ataatttgagaaaatcacataatttagtgtaattata 35017083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 36838553 - 36838589
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  36838553 ataatttgagaaaattacataatttagtgtaattata 36838589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 38749612 - 38749576
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  38749612 ataatttgaaaaaatgacataattcaatgtaattata 38749576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 41558701 - 41558669
Alignment:
Q  24 aatttgagaaaatgacataattcagtgtaatta 56  Q
    |||||||||||||||||||||||| ||||||||    
T  41558701 aatttgagaaaatgacataattcaatgtaatta 41558669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 20743327 - 20743288
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  20743327 ataatttgagaaaatgacataattcagtgtaatcataggt 20743288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 24343517 - 24343556
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  24343517 ataatttgagaaaattacataattcagtgtaattataggt 24343556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 31243597 - 31243558
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  31243597 ataatttgagaaaatgacataattcagtgtaatcataggt 31243558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 57
Target Start/End: Original strand, 32910561 - 32910596
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattat 57  Q
    ||||||||||||||||||||||||||||||||||||    
T  32910561 ataatttgagaaaatgacataattcagtgtaattat 32910596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 26276061 - 26276023
Alignment:
Q  19 atgataatttgagaaaatgacataattcagtgtaattat 57  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  26276061 atgataatttgagaaaatgacataattcaatgtaattat 26276023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 903932 - 903968
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  903932 ataatttgagaaaatcacataattcagtgtaattata 903968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 8423767 - 8423731
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  8423767 ataatttgagaaaatcacataattcagtgtaattata 8423731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 19230363 - 19230319
Alignment:
Q  17 agatgataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||    
T  19230363 agataataatttgagaaaataacataattcaatgtaattataggt 19230319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 22440649 - 22440613
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  22440649 ataatttgagaaaatcacataattcagtgtaattata 22440613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 36635334 - 36635370
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36635334 ataatttgagaaaatcacataattcagtgtaattata 36635370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 7012076 - 7012115
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  7012076 ataatttgagaaaatgacataattcagtgtgatcataggt 7012115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 36386260 - 36386221
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  36386260 ataatttgagaaaaggacataattcagtgtaattaaaggt 36386221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 18576088 - 18576050
Alignment:
Q  20 tgataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  18576088 tgataatttgagaaaatcacataattcggtgtaattata 18576050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 21945513 - 21945547
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaatta 56  Q
    ||||||||| |||||||||||||||||||||||||    
T  21945513 ataatttgaaaaaatgacataattcagtgtaatta 21945547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 2234258 - 2234295
Alignment:
Q  20 tgataatttgagaaaatgacataattcagtgtaattat 57  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  2234258 tgataatttgagaaaatcacataattcaatgtaattat 2234295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 6273954 - 6273991
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattatag 59  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  6273954 ataatttgagaaaatgatataatttagtgtaattatag 6273991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 16189721 - 16189754
Alignment:
Q  24 aatttgagaaaatgacataattcagtgtaattat 57  Q
    ||||||||||||| ||||||||||||||||||||    
T  16189721 aatttgagaaaatcacataattcagtgtaattat 16189754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 5654640 - 5654608
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    |||||||||||||||||||||||||| ||||||    
T  5654640 ataatttgagaaaatgacataattcaatgtaat 5654608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 5775407 - 5775371
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  5775407 ataatttgagaaaatcacataattaagtgtaattata 5775371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 9996850 - 9996886
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  9996850 ataatttgagaaaatcacataattcagtataattata 9996886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 10546158 - 10546190
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    |||||||||||||||||||||||||| ||||||    
T  10546158 ataatttgagaaaatgacataattcaatgtaat 10546190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 18513290 - 18513258
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    |||||||||||||||||||||||||| ||||||    
T  18513290 ataatttgagaaaatgacataattcaatgtaat 18513258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 37698722 - 37698758
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| | |||||||||||||||||||    
T  37698722 ataatttgagaaaattatataattcagtgtaattata 37698758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 40613464 - 40613496
Alignment:
Q  26 tttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||| |||||||||||||||||||||    
T  40613464 tttgagaaaatcacataattcagtgtaattata 40613496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 46180985 - 46180953
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    ||||||||||||||| |||||||||||||||||    
T  46180985 ataatttgagaaaataacataattcagtgtaat 46180953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 54580072 - 54580036
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  54580072 ataatttgaaaaaatcacataattcagtgtaattata 54580036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 16789707 - 16789668
Alignment:
Q  14 cacagatgataatttgagaaaatgacataattcagtgtaa 53  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  16789707 cacagataataatttgagaaaatgacataattcagtgtaa 16789668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 21149072 - 21149109
Alignment:
Q  17 agatgataatttgagaaaatgacataattcagtgtaat 54  Q
    |||| |||||||||||||||||||||||||||||||||    
T  21149072 agataataatttgagaaaatgacataattcagtgtaat 21149109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 16192799 - 16192763
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  16192799 ataatttgagaaaataacataattcagtgtaattata 16192763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 20691329 - 20691361
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    |||||||||||||||||||||||||||||||||    
T  20691329 ataatttgagaaaatgacataattcagtgtaat 20691361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 24205090 - 24205054
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||||||||||| |||||||||||||    
T  24205090 ataatttgagaaaatgacataatacagtgtaattata 24205054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 34189429 - 34189469
Alignment:
Q  14 cacagatgataatttgagaaaatgacataattcagtgtaat 54  Q
    ||||||| ||||||||||||||||||||| |||||||||||    
T  34189429 cacagataataatttgagaaaatgacatatttcagtgtaat 34189469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 1830353 - 1830392
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||| ||||||||||||||||||||||||| ||||||    
T  1830353 ataatttaagaaaatgacataattcagtgtaatcataggt 1830392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 3730214 - 3730175
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  3730214 ataatttgagataatgacataattcagtgtaatcataggt 3730175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 57
Target Start/End: Original strand, 11251988 - 11252023
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattat 57  Q
    ||||||||||||||| ||||||||||||||||||||    
T  11251988 ataatttgagaaaatcacataattcagtgtaattat 11252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 25652080 - 25652041
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  25652080 ataatttgagaaaatgatataattcagtgtagttataggt 25652041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 20503475 - 20503509
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaatta 56  Q
    ||||||||| |||||||||||||||||||||||||    
T  20503475 ataatttgaaaaaatgacataattcagtgtaatta 20503509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 25074799 - 25074837
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattatagg 60  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  25074799 ataatttgagaaaatgacataattgagtgtaatcatagg 25074837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 7928460 - 7928496
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  7928460 ataatttgaaaaaatcacataattcagtgtaattata 7928496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 8039884 - 8039848
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| | |||||||||||||||||||    
T  8039884 ataatttgagaaaattatataattcagtgtaattata 8039848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 8383267 - 8383303
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| | |||||||||||||||||||    
T  8383267 ataatttgagaaaatcatataattcagtgtaattata 8383303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 8789599 - 8789563
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  8789599 ataatttgagaaaatcacataattccgtgtaattata 8789563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 9624651 - 9624687
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  9624651 ataatttgagaaaatcacataattcaatgtaattata 9624687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 10690311 - 10690275
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  10690311 ataatctgagaaaatcacataattcagtgtaattata 10690275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 11313849 - 11313813
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  11313849 ataatttgagaaaatcacataatttagtgtaattata 11313813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 11493410 - 11493374
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  11493410 ataatgtgagaaaatcacataattcagtgtaattata 11493374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 12704017 - 12704053
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||  |||||||||||||||||||||    
T  12704017 ataatttgagaaaagcacataattcagtgtaattata 12704053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 14840340 - 14840304
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  14840340 ataatttcagaaaatcacataattcagtgtaattata 14840304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 15812870 - 15812834
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  15812870 ataatttgagaaaatcacataactcagtgtaattata 15812834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 25948936 - 25948900
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  25948936 ataatttgaaaaaatcacataattcagtgtaattata 25948900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 32804589 - 32804553
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  32804589 ataatttgagaaaatcacataatttagtgtaattata 32804553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 34307829 - 34307793
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  34307829 ataatttgagaaaatcacatatttcagtgtaattata 34307793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 49505203 - 49505167
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  49505203 ataatttgagaaaatcacataatttagtgtaattata 49505167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 36878471 - 36878510
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  36878471 ataatttgagaaaatcacataattcagtgtaattataggt 36878510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 40747822 - 40747783
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  40747822 ataatttgagaaaatgacataattcaatgtaattataggt 40747783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 19324570 - 19324608
Alignment:
Q  20 tgataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  19324570 tgataatttgagaaaatcacataattcagtgtaattata 19324608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 25098606 - 25098568
Alignment:
Q  20 tgataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  25098606 tgataatttgagaaaatcacataattcagtgtaattata 25098568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 25361894 - 25361932
Alignment:
Q  20 tgataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  25361894 tgataatttgagaaaatcacataattcagtgtaattata 25361932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 1864929 - 1864893
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  1864929 ataatttgagaaaatcacataattcagtgtaattata 1864893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 7918260 - 7918224
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  7918260 ataatttgagaaaatcacataattcagtgtaattata 7918224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 34298446 - 34298482
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34298446 ataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 40181881 - 40181917
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  40181881 ataatttgagaaaatcacataattcagtgtaattata 40181917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 44482240 - 44482276
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattata 44482276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 398814 - 398775
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  398814 ataatttgaaaaaatcacataattcagtgtaattataggt 398775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 22794127 - 22794088
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||| ||||||||||||| ||||||||||||||||    
T  22794127 ataatttgaaaaaatgacataatacagtgtaattataggt 22794088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 24176416 - 24176377
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  24176416 ataatttgagaaaataacatcattcagtgtaattataggt 24176377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 39101231 - 39101192
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  39101231 ataatttgagaaaataacataattaagtgtaattataggt 39101192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 42004996 - 42004957
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  42004996 ataatttgagaaaatgacataatttagtgtaatcataggt 42004957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Original strand, 42325570 - 42325601
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaa 53  Q
    ||||||||||||||||||||||||||||||||    
T  42325570 ataatttgagaaaatgacataattcagtgtaa 42325601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 31015053 - 31015087
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaatta 56  Q
    ||||||||||||||| |||||||||||||||||||    
T  31015053 ataatttgagaaaatcacataattcagtgtaatta 31015087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 12443509 - 12443476
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaatt 55  Q
    ||||||||||||||| ||||||||||||||||||    
T  12443509 ataatttgagaaaatcacataattcagtgtaatt 12443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 1486758 - 1486722
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  1486758 ataatttgaaaaaatcacataattcagtgtaattata 1486722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 47
Target Start/End: Original strand, 2445877 - 2445905
Alignment:
Q  19 atgataatttgagaaaatgacataattca 47  Q
    |||||||||||||||||||||||||||||    
T  2445877 atgataatttgagaaaatgacataattca 2445905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 3921677 - 3921709
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    |||||||||||||||||||||||||| ||||||    
T  3921677 ataatttgagaaaatgacataattcaatgtaat 3921709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 6427360 - 6427396
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  6427360 ataatttgagaaaatcacataattcaatgtaattata 6427396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 10233263 - 10233299
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    |||| |||||||||| |||||||||||||||||||||    
T  10233263 ataaattgagaaaatcacataattcagtgtaattata 10233299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 11571595 - 11571627
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    |||||||||||||||||||||||||| ||||||    
T  11571595 ataatttgagaaaatgacataattcaatgtaat 11571627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 14332691 - 14332655
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  14332691 ataatttgagaaaatcacataatttagtgtaattata 14332655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 26238161 - 26238129
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    ||||||||||||||| |||||||||||||||||    
T  26238161 ataatttgagaaaataacataattcagtgtaat 26238129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 28674810 - 28674846
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  28674810 ataatttgagaaaattacataattcagtataattata 28674846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 34712432 - 34712396
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  34712432 ataatttgagaaaataacataatttagtgtaattata 34712396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 41017453 - 41017417
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    |||||||||||||||||||||||| | ||||||||||    
T  41017453 ataatttgagaaaatgacataatttaatgtaattata 41017417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 53190 - 53226
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  53190 ataatttgagaaaatcacataattcagtgtaattata 53226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 225325 - 225281
Alignment:
Q  14 cacagatgataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||| ||||||||||||||||||||||| || ||||||||||    
T  225325 cacagataataatttgagaaaatgacataatacaatgtaattata 225281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 10535808 - 10535776
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    |||||||||||||||||||||||||||||||||    
T  10535808 ataatttgagaaaatgacataattcagtgtaat 10535776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 12668472 - 12668436
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||| |||||||||||||||||||||||||||    
T  12668472 ataatttgaaaaaatgacataattcagtgtaattata 12668436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 21616772 - 21616808
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  21616772 ataatttgagaaaatcacataattcagtgtaattata 21616808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 23921263 - 23921299
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  23921263 ataatttgagaaaattacataattcagtgtaattata 23921299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 34007045 - 34007001
Alignment:
Q  17 agatgataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||    
T  34007045 agataataatttgagaaattgacataattcagtgtaatcataggt 34007001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 11308053 - 11308014
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||| ||||||||||||||||||||||| ||||||    
T  11308053 ataatttgaaaaaatgacataattcagtgtaatcataggt 11308014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 12748694 - 12748733
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  12748694 ataatttgagaaaatgacatagttcagtgtaatcataggt 12748733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 19573988 - 19574027
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  19573988 ataatttaagaaaataacataattcagtgtaattataggt 19574027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 21782867 - 21782832
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattat 57  Q
    ||||||||||||||| ||||||||||||||||||||    
T  21782867 ataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 23354709 - 23354662
Alignment:
Q  14 cacagatgataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||| ||||||||||||||||| |||||| |||||||| ||||||    
T  23354709 cacagataataatttgagaaaatgatataatttagtgtaatcataggt 23354662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 24011046 - 24011085
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  24011046 ataatttgagaaaatgacataatttagtgtaatcataggt 24011085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 25544491 - 25544530
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    ||||||||||||||||| ||||||||||||||| ||||||    
T  25544491 ataatttgagaaaatgatataattcagtgtaatcataggt 25544530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 30563419 - 30563458
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattataggt 61  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  30563419 ataatttgagaaaatgacataattcaatgtaactataggt 30563458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 25846751 - 25846789
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattatagg 60  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  25846751 ataatttgagaaaatcacatgattcagtgtaattatagg 25846789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 40681992 - 40682025
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaatt 55  Q
    |||||||||||||||||||||||||| |||||||    
T  40681992 ataatttgagaaaatgacataattcaatgtaatt 40682025  T

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Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 5367202 - 5367238
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    |||||||||| |||| |||||||||||||||||||||    
T  5367202 ataatttgaggaaatcacataattcagtgtaattata 5367238  T

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Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 15909677 - 15909645
Alignment:
Q  26 tttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||| |||||||||||||||||||||    
T  15909677 tttgagaaaattacataattcagtgtaattata 15909645  T

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Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 18570982 - 18571014
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaat 54  Q
    |||||||||||||||||||||||||| ||||||    
T  18570982 ataatttgagaaaatgacataattcaatgtaat 18571014  T

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Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 23718036 - 23718072
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  23718036 ataatttgagaaagtcacataattcagtgtaattata 23718072  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 24105708 - 24105744
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  24105708 ataatttgagaaagtcacataattcagtgtaattata 24105744  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 28677919 - 28677955
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  28677919 ataatttgaaaaaatcacataattcagtgtaattata 28677955  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 35449523 - 35449559
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  35449523 ataatttgagaaaatcacagaattcagtgtaattata 35449559  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 37411293 - 37411257
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  37411293 ataatttgagaaaatcacataattcagtgtgattata 37411257  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 42832325 - 42832289
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  42832325 ataatttgagaaaattacatatttcagtgtaattata 42832289  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 44860330 - 44860366
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    |||||||||||||||  ||||||||||||||||||||    
T  44860330 ataatttgagaaaatcgcataattcagtgtaattata 44860366  T

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Target: scaffold0598 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 8102 - 8071
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaa 53  Q
    ||||||||||||||||||||||||||||||||    
T  8102 ataatttgagaaaatgacataattcagtgtaa 8071  T

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Target: scaffold0123 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 44572 - 44538
Alignment:
Q  24 aatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||| |||||||||||||||||||||    
T  44572 aatttgagaaaatcacataattcagtgtaattata 44538  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 92817 - 92851
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaatta 56  Q
    ||||||||||||||| |||||||||||||||||||    
T  92817 ataatttgagaaaattacataattcagtgtaatta 92851  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 56927 - 56964
Alignment:
Q  17 agatgataatttgagaaaatgacataattcagtgtaat 54  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  56927 agattataatttgagaaaatgatataattcagtgtaat 56964  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 70288 - 70324
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  70288 ataatttgaaaaaataacataattcagtgtaattata 70324  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 9796 - 9760
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| || ||||||||||||||||||    
T  9796 ataatttgagaaaatcacttaattcagtgtaattata 9760  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 90853 - 90889
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| | |||||||||||||||||||    
T  90853 ataatttgagaaaatcatataattcagtgtaattata 90889  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 135361 - 135325
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  135361 ataatttgagaaaatcacataattctgtgtaattata 135325  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 263421 - 263385
Alignment:
Q  22 ataatttgagaaaatgacataattcagtgtaattata 58  Q
    ||||||||||||||  |||||||||||||||||||||    
T  263421 ataatttgagaaaaccacataattcagtgtaattata 263385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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