View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12701_low_29 (Length: 225)
Name: NF12701_low_29
Description: NF12701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12701_low_29 |
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Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 8 - 208
Target Start/End: Original strand, 10496995 - 10497195
Alignment:
| Q |
8 |
atacaggtggattttattcagcattcccagcacagcctattccctatggaatgacatatttcaaaacaccagttggacgttcttctgatgggaggctcat |
107 |
Q |
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| T |
10496995 |
atacaggtggattttattcagcatttccagcacaacctattccctatggaatgacatatttcaaaacaccagttggacgttcttctgatgggaggctcat |
10497094 |
T |
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| Q |
108 |
tgtagattttttgggtaatgatcaatcttcataatattatatgtgtattttgttttctatagattccctcaaccgaatgcaatactatttgaggtattac |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10497095 |
tgtagattttttgggtaatgatcaatcttcataatattatatgtgtattttgttttctatagattccctcaaccgaatgcaatactatttgaggtattac |
10497194 |
T |
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| Q |
208 |
c |
208 |
Q |
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| T |
10497195 |
c |
10497195 |
T |
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