View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1270_low_32 (Length: 388)

Name: NF1270_low_32
Description: NF1270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1270_low_32
NF1270_low_32
[»] chr7 (3 HSPs)
chr7 (220-388)||(32548553-32548721)
chr7 (224-340)||(32547707-32547823)
chr7 (219-269)||(40320409-40320459)
[»] chr4 (14 HSPs)
chr4 (219-388)||(33370757-33370924)
chr4 (101-219)||(53086506-53086624)
chr4 (219-340)||(33369908-33370029)
chr4 (30-99)||(53086677-53086746)
chr4 (217-289)||(23383307-23383379)
chr4 (219-270)||(38009283-38009334)
chr4 (220-286)||(17512188-17512254)
chr4 (220-266)||(32449317-32449363)
chr4 (219-268)||(34154793-34154842)
chr4 (219-268)||(34155626-34155675)
chr4 (220-268)||(31911468-31911516)
chr4 (220-268)||(32450218-32450266)
chr4 (254-298)||(43079194-43079238)
chr4 (348-388)||(43079872-43079912)
[»] chr5 (7 HSPs)
chr5 (220-388)||(32944366-32944532)
chr5 (215-340)||(32943512-32943637)
chr5 (215-269)||(9923383-9923437)
chr5 (215-298)||(26712358-26712441)
chr5 (215-298)||(26982096-26982179)
chr5 (221-298)||(4789521-4789598)
chr5 (219-292)||(35263285-35263358)
[»] chr1 (3 HSPs)
chr1 (219-386)||(38931313-38931480)
chr1 (219-262)||(2687733-2687776)
chr1 (227-289)||(29334221-29334283)
[»] chr8 (2 HSPs)
chr8 (220-386)||(37562295-37562461)
chr8 (220-269)||(35943838-35943887)
[»] chr3 (1 HSPs)
chr3 (219-386)||(51421557-51421724)
[»] chr2 (4 HSPs)
chr2 (217-291)||(34617650-34617724)
chr2 (219-289)||(36390956-36391026)
chr2 (300-376)||(4386088-4386166)
chr2 (219-289)||(7868120-7868190)
[»] chr6 (2 HSPs)
chr6 (219-257)||(25067861-25067899)
chr6 (220-281)||(29290123-29290184)


Alignment Details
Target: chr7 (Bit Score: 137; Significance: 2e-71; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 220 - 388
Target Start/End: Complemental strand, 32548721 - 32548553
Alignment:
Q  220 ggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagttaatgttagccattagatcaagtagagaactatacaccctcaacagtagat 319  Q
    |||||||||||| ||| |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  32548721 ggtggggtttagtatgggaaatgatacttgtttcccaccatgggaaagttaatgttagccattagatcaagtagagaactatacaccctcaacattatat 32548622  T
Q  320 tattttgtcactatcttccactgccatctctccttcataccaaccaacccaccaccagcaacaccatca 388  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32548621 tattttgtcactatcttccactaccatctctccttcataccaaccaacccaccaccagcaacaccatca 32548553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 224 - 340
Target Start/End: Original strand, 32547707 - 32547823
Alignment:
Q  224 gggtttagcatgagaaaggatacttgtttcccacaatggaaaagttaatgttagccattagatcaagtagagaactatacaccctcaacagtagattatt 323  Q
    |||||||||||| |||||||| ||||||| |||| || | |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||    
T  32547707 gggtttagcatgggaaaggattcttgttttccaccataggaaagttaatgttagccattagatcaaatagagaactatagaccctcaacactagattatt 32547806  T
Q  324 ttgtcactatcttccac 340  Q
    ||||||  |||||||||    
T  32547807 ttgtcatcatcttccac 32547823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 40320459 - 40320409
Alignment:
Q  219 aggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagtt 269  Q
    ||||||||||||||||| ||||||| | ||||||||||| |||||||||||    
T  40320459 aggtggggtttagcatgggaaaggagagttgtttcccaccatggaaaagtt 40320409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 7e-68; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 219 - 388
Target Start/End: Complemental strand, 33370924 - 33370757
Alignment:
Q  219 aggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagttaatgttagccattagatcaagtagagaactatacaccctcaacagtaga 318  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  33370924 aggtggggtttagcatgggaaaggatacttgtttcccaccatgggaaagttaatgttagccattagatcaagtagagaattatacaccctcaacactaga 33370825  T
Q  319 ttattttgtcactatcttccactgccatctctccttcataccaaccaacccaccaccagcaacaccatca 388  Q
    |||  |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  33370824 tta--ttgtcactatcttccactaccatctctcctccataccaaccaacccaccaccagcaacaccatca 33370757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 101 - 219
Target Start/End: Complemental strand, 53086624 - 53086506
Alignment:
Q  101 ggggtgtgacggctcgcttaactcgtttttcaannnnnnnnaataattcacgtatgtaatcattaattattatctaagttgcataagtgtataggacaaa 200  Q
    |||||||||||||||||||||||||||||||||        ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  53086624 ggggtgtgacggctcgcttaactcgtttttcaattttttttaataattcaagtatgtaatcattaattattatctgagttgcataagtgtataggacaaa 53086525  T
Q  201 gaaataacattttctttga 219  Q
    |||||||||||||||||||    
T  53086524 gaaataacattttctttga 53086506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 219 - 340
Target Start/End: Original strand, 33369908 - 33370029
Alignment:
Q  219 aggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagttaatgttagccattagatcaagtagagaactatacaccctcaacagtaga 318  Q
    ||||||| ||||||||| |||| |||| ||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  33369908 aggtgggatttagcatgggaaatgatatttgtttcccaccatgggaaagttaatgttagccattagatcaggtagagaactatacaccctcaacactaga 33370007  T
Q  319 ttattttgtcactatcttccac 340  Q
    ||||||||| || |||||||||    
T  33370008 ttattttgtaaccatcttccac 33370029  T

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Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 53086746 - 53086677
Alignment:
Q  30 aaaacgagctcaatctgtcgaaccgactcgtttaacctgctcctttttgcggattgagttgaagttttga 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53086746 aaaacgagctcaatctgtcgaaccgactcgtttaacctgctcctttttgcggattgagttgaagttttga 53086677  T

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Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 23383307 - 23383379
Alignment:
Q  217 tgaggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagttaatgttagccattagatcaa 289  Q
    ||||||||||||||| ||||||||||| | ||||||||||| |||| ||||||||| ||| ||||| ||||||    
T  23383307 tgaggtggggtttagaatgagaaaggagagttgtttcccaccatgggaaagttaattttatccattcgatcaa 23383379  T

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Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 38009283 - 38009334
Alignment:
Q  219 aggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagtta 270  Q
    ||||||| ||||||||| ||||||||| ||||||||||| ||||||||||||    
T  38009283 aggtgggatttagcatgggaaaggataattgtttcccaccatggaaaagtta 38009334  T

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Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 286
Target Start/End: Complemental strand, 17512254 - 17512188
Alignment:
Q  220 ggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagttaatgttagccattagat 286  Q
    |||||||||||||||||||| ||||| ||||||||||  |||| ||||| ||| |||| ||||||||    
T  17512254 ggtggggtttagcatgagaatggatagttgtttcccatcatgggaaagtaaattttagtcattagat 17512188  T

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Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 32449317 - 32449363
Alignment:
Q  220 ggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaa 266  Q
    |||||| ||||| ||| ||||||||||||||||||||| ||||||||    
T  32449317 ggtgggatttagtatgggaaaggatacttgtttcccaccatggaaaa 32449363  T

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Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 34154793 - 34154842
Alignment:
Q  219 aggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagt 268  Q
    ||||||||||||||||| |||| || ||||||||||||| |||| |||||    
T  34154793 aggtggggtttagcatgggaaaagaaacttgtttcccaccatgggaaagt 34154842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 34155675 - 34155626
Alignment:
Q  219 aggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagt 268  Q
    ||||||||||||||||| ||||||  |||||||| |||| ||||||||||    
T  34155675 aggtggggtttagcatgggaaagggaacttgttttccaccatggaaaagt 34155626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 31911516 - 31911468
Alignment:
Q  220 ggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagt 268  Q
    |||||||||||  ||| ||||||||| ||||||||||| ||||||||||    
T  31911516 ggtggggtttaatatgggaaaggatatttgtttcccaccatggaaaagt 31911468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 32450266 - 32450218
Alignment:
Q  220 ggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagt 268  Q
    |||||||||||  ||| |||| |||||||||||||||| ||||||||||    
T  32450266 ggtggggtttaatatgggaaatgatacttgtttcccaccatggaaaagt 32450218  T

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Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 43079194 - 43079238
Alignment:
Q  254 ccacaatggaaaagttaatgttagccattagatcaagtagagaac 298  Q
    ||||||||| ||||||||| ||| ||||||||||||||| |||||    
T  43079194 ccacaatgggaaagttaattttatccattagatcaagtaaagaac 43079238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 348 - 388
Target Start/End: Complemental strand, 43079912 - 43079872
Alignment:
Q  348 tctccttcataccaaccaacccaccaccagcaacaccatca 388  Q
    |||||||||| || ||||||||||||||| |||||||||||    
T  43079912 tctccttcatccccaccaacccaccaccaccaacaccatca 43079872  T

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Target: chr5 (Bit Score: 130; Significance: 3e-67; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 220 - 388
Target Start/End: Complemental strand, 32944532 - 32944366
Alignment:
Q  220 ggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagttaatgttagccattagatcaagtagagaactatacaccctcaacagtagat 319  Q
    |||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  32944532 ggtggggtttagcatgggaaatgatacttgtttcccaccatggaaaagttaatgttagccattagattaagtagagaactatacaccctcaacactagat 32944433  T
Q  320 tattttgtcactatcttccactgccatctctccttcataccaaccaacccaccaccagcaacaccatca 388  Q
    ||  |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  32944432 ta--ttgtcactatcttccactaccatctctcctccataccaaccaacccaccaccagcaacaccatca 32944366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 215 - 340
Target Start/End: Original strand, 32943512 - 32943637
Alignment:
Q  215 tttgaggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagttaatgttagccattagatcaagtagagaactatacaccctcaacag 314  Q
    ||||||||||| ||||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  32943512 tttgaggtgggatttagcatgggaaaggatatttgtttcccaccatgggaaagttaatgttagccattagatcaggtagagaactatacaccctcaacac 32943611  T
Q  315 tagattattttgtcactatcttccac 340  Q
    ||||||||||||| || |||||||||    
T  32943612 tagattattttgtaaccatcttccac 32943637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 9923383 - 9923437
Alignment:
Q  215 tttgaggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagtt 269  Q
    ||||||||||||||||||||| ||| ||| | ||||||||||| |||||||||||    
T  9923383 tttgaggtggggtttagcatgggaatggagagttgtttcccaccatggaaaagtt 9923437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 298
Target Start/End: Complemental strand, 26712441 - 26712358
Alignment:
Q  215 tttgaggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagttaatgttagccattagatcaagtagagaac 298  Q
    ||||| |||| |||||||||| ||||||  | ||||||||||| |||| |||| |||| ||| |||| |||||||||| |||||    
T  26712441 tttgacgtggagtttagcatgggaaagggaagttgtttcccaccatgggaaagctaattttaaccatcagatcaagtaaagaac 26712358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 298
Target Start/End: Complemental strand, 26982179 - 26982096
Alignment:
Q  215 tttgaggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagttaatgttagccattagatcaagtagagaac 298  Q
    ||||| |||| |||||||||| ||||||  | ||||||||||| |||| |||| |||| ||| |||| |||||||||| |||||    
T  26982179 tttgacgtggagtttagcatgggaaagggaagttgtttcccaccatgggaaagctaattttaaccatcagatcaagtaaagaac 26982096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 4789521 - 4789598
Alignment:
Q  221 gtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagttaatgttagccattagatcaagtagagaac 298  Q
    ||||||||||||||| ||||||  | ||||||||||| |||| ||||||| | ||  |||||||||||| | ||||||    
T  4789521 gtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatggagaac 4789598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 292
Target Start/End: Complemental strand, 35263358 - 35263285
Alignment:
Q  219 aggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagttaatgttagccattagatcaagta 292  Q
    ||||| ||||||||||| ||||||||| |||||| |||  |||||||||||  | ||| ||||||||| |||||    
T  35263358 aggtgaggtttagcatgggaaaggatagttgttttccatcatggaaaagttgtttttatccattagattaagta 35263285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 219 - 386
Target Start/End: Original strand, 38931313 - 38931480
Alignment:
Q  219 aggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagttaatgttagccattagatcaagtagagaactatacaccctcaacagtaga 318  Q
    ||||||||||||||||||||||||  | ||||||||||| |||| ||||| ||| | | |||||||||| |  |    |  |||||| ||||||| || |    
T  38931313 aggtggggtttagcatgagaaaggggaattgtttcccaccatgggaaagtcaatttgaaccattagatctacaatcttatcatacactctcaacactata 38931412  T
Q  319 ttattttgtcactatcttccactgccatctc--tccttcataccaaccaacccaccaccagcaacaccat 386  Q
    ||  ||||||||||||||||||| |||||||  |||||||| || |||||||||||||||||||||||||    
T  38931413 tt--tttgtcactatcttccactaccatctctctccttcatccccaccaacccaccaccagcaacaccat 38931480  T

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Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 2687776 - 2687733
Alignment:
Q  219 aggtggggtttagcatgagaaaggatacttgtttcccacaatgg 262  Q
    ||||||||||||||||| ||||||||| ||||||||||| ||||    
T  2687776 aggtggggtttagcatgggaaaggataattgtttcccaccatgg 2687733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 29334221 - 29334283
Alignment:
Q  227 tttagcatgagaaaggatacttgtttcccacaatggaaaagttaatgttagccattagatcaa 289  Q
    ||||||||| ||| ||||| ||||||||||| |||| ||||| ||| ||| ||||||||||||    
T  29334221 tttagcatgggaatggatagttgtttcccaccatgggaaagtaaattttacccattagatcaa 29334283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 220 - 386
Target Start/End: Original strand, 37562295 - 37562461
Alignment:
Q  220 ggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagttaatgttagccattagatcaagtagagaactatacaccctcaacagtagat 319  Q
    |||||||||||||||| ||||||| | ||||||||||| || | ||||| ||| ||| |||||||||| |  |    |  |||||| ||||||| || ||    
T  37562295 ggtggggtttagcatgggaaaggagaattgtttcccaccataggaaagtcaattttaaccattagatctacaatcttatcatacactctcaacactatat 37562394  T
Q  320 tattttgtcactatcttccactgccatctc--tccttcataccaaccaacccaccaccagcaacaccat 386  Q
    |  ||||||||||||||||||| |||||||  |||||||| || |||||||||||||||||||||||||    
T  37562395 t--tttgtcactatcttccactaccatctctctccttcatccccaccaacccaccaccagcaacaccat 37562461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 35943887 - 35943838
Alignment:
Q  220 ggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagtt 269  Q
    |||||||||||||||| ||||||| | ||||||||||| |||||||||||    
T  35943887 ggtggggtttagcatgggaaaggagaattgtttcccactatggaaaagtt 35943838  T

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Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 386
Target Start/End: Complemental strand, 51421724 - 51421557
Alignment:
Q  219 aggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagttaatgttagccattagatcaagtagagaactatacaccctcaacagtaga 318  Q
    ||||||||||||||||||||||||  | ||||||||||| |||| ||||| ||| | | |||||| ||| |  |    |  |||||| ||||||| || |    
T  51421724 aggtggggtttagcatgagaaaggggaattgtttcccaccatgggaaagtcaatttgaaccattaaatctacaatcttatcatacactctcaacactata 51421625  T
Q  319 ttattttgtcactatcttccactgccatctctc--cttcataccaaccaacccaccaccagcaacaccat 386  Q
    ||  ||||||||||||||||||| |||||||||  |||||| || |||||||||||||||||||||||||    
T  51421624 tt--tttgtcactatcttccactaccatctctctccttcatccccaccaacccaccaccagcaacaccat 51421557  T

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Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 291
Target Start/End: Original strand, 34617650 - 34617724
Alignment:
Q  217 tgaggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagttaatgttagccattagatcaagt 291  Q
    ||||||||||||||||||| ||||||||| ||||||||||| |||| ||||||| | ||  ||||||||| ||||    
T  34617650 tgaggtggggtttagcatgggaaaggataattgtttcccaccatgggaaagttatttttgaccattagattaagt 34617724  T

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Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 289
Target Start/End: Original strand, 36390956 - 36391026
Alignment:
Q  219 aggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagttaatgttagccattagatcaa 289  Q
    ||||||||||||||||| ||||||  | ||||||||||| |||| ||||| ||| ||| ||||||||||||    
T  36390956 aggtggggtttagcatgggaaagggaagttgtttcccaccatgggaaagtaaattttaaccattagatcaa 36391026  T

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Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 4386166 - 4386088
Alignment:
Q  300 atacaccctcaacagtagattattttgtcactatcttccactgccat--ctctccttcataccaaccaacccaccacca 376  Q
    |||||| ||||||| |||| | |||||||||||||||||||  ||||  ||||||||||| || ||||||||| |||||    
T  4386166 atacactctcaacactagaattttttgtcactatcttccacaaccatcactctccttcatccccaccaacccatcacca 4386088  T

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Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 7868190 - 7868120
Alignment:
Q  219 aggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagttaatgttagccattagatcaa 289  Q
    ||||||| ||||||||||||||||  | ||||||||||| |||| ||||| ||| ||| ||| ||||||||    
T  7868190 aggtgggatttagcatgagaaaggggagttgtttcccaccatgggaaagtaaattttaaccactagatcaa 7868120  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 257
Target Start/End: Complemental strand, 25067899 - 25067861
Alignment:
Q  219 aggtggggtttagcatgagaaaggatacttgtttcccac 257  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  25067899 aggtggggtttagcatgggaaaggatatttgtttcccac 25067861  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 29290123 - 29290184
Alignment:
Q  220 ggtggggtttagcatgagaaaggatacttgtttcccacaatggaaaagttaatgttagccat 281  Q
    ||||||||||||||||  || ||| | ||||||||||| |||| ||||||||||||| ||||    
T  29290123 ggtggggtttagcatggaaatggagagttgtttcccaccatgggaaagttaatgttaaccat 29290184  T

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