View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1270_low_70 (Length: 262)
Name: NF1270_low_70
Description: NF1270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1270_low_70 |
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Alignment Details
Target: chr1 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 40517840 - 40517673
Alignment:
| Q |
66 |
ggttttgacgcaaatgggttcacatatatcttaatacttgtatttggtctcgtattcttggttctttcaatagttattgcatgtgttcgacttcgtagtt |
165 |
Q |
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| T |
40517840 |
ggttttgacgcaaatgggttcacatatatcttaatacttgtatttggtctcgtattcttggttctttcaatagttattgcatgtgttcgacttcgtagtt |
40517741 |
T |
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| Q |
166 |
cacgaagtcgaaacattctcaatattttgtctggttttccaccacatcgtcatgaagactcaatcatg |
233 |
Q |
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| T |
40517740 |
cacgaagtcgaaacattctcaatattttgtccggttttccaccacatcgtcatgaagactcaatcatg |
40517673 |
T |
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