View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1270_low_76 (Length: 253)
Name: NF1270_low_76
Description: NF1270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1270_low_76 |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 30 - 243
Target Start/End: Complemental strand, 51487364 - 51487151
Alignment:
| Q |
30 |
tctccaaacctgtaaattgaatacatccatcaatttcatgaaacacgcacaataaatgcaaattttaaatcgcgagcctagagaatcggacaaaagaatg |
129 |
Q |
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| T |
51487364 |
tctccaaacctgtaaattgaatacatccatcaatttcatgaaacacacacaataaatgcaaattttaaatcgcgagcctagagaatcggacaaaagaatg |
51487265 |
T |
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| Q |
130 |
tgtacatgagatataatctaccaacgcctttgagagcaaagcagtatatcaagaaacacaagtatatcaaattcataaccaaagggagaggaagtttgca |
229 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51487264 |
tgtacatgagatataatctaccaatgcctttgagagcaaagcagtatatcaagaaacacaagtatatcaaattcataaccaaagggagaggaagtttgca |
51487165 |
T |
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| Q |
230 |
atcagtaacctttg |
243 |
Q |
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|||||||||||||| |
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| T |
51487164 |
atcagtaacctttg |
51487151 |
T |
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