View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1271-6-Insertion-2 (Length: 840)

Name: NF1271-6-Insertion-2
Description: NF1271-6
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1271-6-Insertion-2
NF1271-6-Insertion-2
[»] chr1 (31 HSPs)
chr1 (8-456)||(51487360-51487809)
chr1 (613-832)||(45507348-45507557)
chr1 (522-610)||(35597757-35597850)
chr1 (522-610)||(35598192-35598285)
chr1 (519-610)||(39514243-39514339)
chr1 (717-818)||(45507213-45507309)
chr1 (522-610)||(2052101-2052194)
chr1 (519-587)||(38211811-38211879)
chr1 (717-823)||(2051928-2052029)
chr1 (613-782)||(35598150-35598310)
chr1 (750-823)||(35597642-35597714)
chr1 (626-782)||(39514201-39514348)
chr1 (453-517)||(51488700-51488769)
chr1 (626-782)||(2052059-2052206)
chr1 (612-676)||(35597812-35597876)
chr1 (750-816)||(35598026-35598091)
chr1 (549-610)||(45507290-45507356)
chr1 (626-677)||(38211837-38211888)
chr1 (522-610)||(45507439-45507532)
chr1 (717-801)||(15689421-15689500)
chr1 (750-801)||(2585478-2585528)
chr1 (750-801)||(45507049-45507099)
chr1 (750-801)||(48958628-48958678)
chr1 (717-801)||(7476058-7476137)
chr1 (717-801)||(7476619-7476698)
chr1 (717-801)||(9530085-9530164)
chr1 (752-801)||(15689290-15689338)
chr1 (717-801)||(22194909-22194988)
chr1 (717-797)||(36455256-36455331)
chr1 (717-801)||(42492504-42492583)
chr1 (717-797)||(48647785-48647860)
[»] scaffold0160 (5 HSPs)
scaffold0160 (612-832)||(36013-36223)
scaffold0160 (522-610)||(36039-36132)
scaffold0160 (750-832)||(36290-36371)
scaffold0160 (549-587)||(36363-36401)
scaffold0160 (549-610)||(36215-36281)
[»] chr2 (50 HSPs)
chr2 (611-832)||(1925588-1925799)
chr2 (638-827)||(35433089-35433268)
chr2 (522-587)||(1925707-1925772)
chr2 (521-587)||(35433203-35433269)
chr2 (522-610)||(13899815-13899908)
chr2 (522-610)||(13905713-13905806)
chr2 (626-817)||(27999614-27999795)
chr2 (523-587)||(27999718-27999782)
chr2 (626-817)||(28090348-28090529)
chr2 (523-587)||(28090452-28090516)
chr2 (626-817)||(28096671-28096852)
chr2 (523-587)||(28096775-28096839)
chr2 (522-610)||(26453350-26453443)
chr2 (522-610)||(40603186-40603279)
chr2 (717-823)||(40603350-40603451)
chr2 (626-782)||(13905701-13905848)
chr2 (717-823)||(13905878-13905979)
chr2 (717-823)||(26453515-26453616)
chr2 (522-572)||(1271964-1272014)
chr2 (626-782)||(13899803-13899950)
chr2 (522-587)||(35433288-35433353)
chr2 (523-573)||(27999854-27999904)
chr2 (523-573)||(28090588-28090638)
chr2 (523-573)||(28096911-28096961)
chr2 (626-782)||(26453338-26453485)
chr2 (717-821)||(32287445-32287544)
chr2 (626-782)||(40603174-40603321)
chr2 (626-677)||(27999866-27999917)
chr2 (626-677)||(28090600-28090651)
chr2 (626-677)||(28096923-28096974)
chr2 (717-806)||(32287306-32287390)
chr2 (549-610)||(35433026-35433092)
chr2 (717-801)||(36440077-36440156)
chr2 (750-806)||(32287071-32287126)
chr2 (638-677)||(1271964-1272003)
chr2 (750-801)||(13899159-13899209)
chr2 (750-801)||(21591158-21591208)
chr2 (750-801)||(26452958-26453008)
chr2 (750-801)||(40602794-40602844)
chr2 (549-587)||(1925558-1925596)
chr2 (717-801)||(180240-180319)
chr2 (717-801)||(979997-980076)
chr2 (717-801)||(980245-980324)
chr2 (717-801)||(980450-980529)
chr2 (717-801)||(2444153-2444232)
chr2 (752-801)||(14039778-14039826)
chr2 (717-801)||(19640940-19641019)
chr2 (717-801)||(19839533-19839612)
chr2 (562-610)||(26452895-26452948)
chr2 (632-665)||(35433326-35433359)
[»] chr5 (25 HSPs)
chr5 (626-832)||(20844892-20845088)
chr5 (626-832)||(20844648-20844844)
chr5 (612-832)||(20842236-20842446)
chr5 (522-610)||(23179256-23179349)
chr5 (522-610)||(23179447-23179540)
chr5 (522-587)||(20844904-20844969)
chr5 (750-823)||(20844516-20844588)
chr5 (626-782)||(23179435-23179582)
chr5 (717-823)||(32672872-32672973)
chr5 (529-610)||(20842269-20842355)
chr5 (522-610)||(20844660-20844753)
chr5 (750-823)||(23179641-23179713)
chr5 (626-782)||(23179244-23179391)
chr5 (750-798)||(20842514-20842561)
chr5 (750-801)||(23178736-23178786)
chr5 (549-610)||(20844440-20844506)
chr5 (549-587)||(20845080-20845118)
chr5 (750-800)||(20845156-20845205)
chr5 (717-801)||(12651326-12651405)
chr5 (717-801)||(23178449-23178528)
chr5 (717-801)||(23180110-23180189)
chr5 (717-801)||(23184378-23184457)
chr5 (752-801)||(32672054-32672102)
chr5 (717-801)||(34757372-34757451)
chr5 (717-801)||(39874206-39874285)
[»] chr6 (5 HSPs)
chr6 (626-823)||(3589194-3589381)
chr6 (522-587)||(3589206-3589271)
chr6 (717-801)||(29371660-29371739)
chr6 (752-801)||(24456494-24456542)
chr6 (717-801)||(33049694-33049773)
[»] chr4 (25 HSPs)
chr4 (522-610)||(41862248-41862341)
chr4 (522-610)||(22673749-22673842)
chr4 (522-587)||(41946795-41946860)
chr4 (626-782)||(41946723-41946872)
chr4 (626-782)||(41862206-41862353)
chr4 (522-610)||(52680175-52680268)
chr4 (717-823)||(41861893-41861994)
chr4 (717-823)||(52680340-52680441)
chr4 (626-782)||(22673737-22673884)
chr4 (626-782)||(52680163-52680310)
chr4 (717-823)||(41946442-41946543)
chr4 (717-801)||(29363491-29363570)
chr4 (717-801)||(35756457-35756536)
chr4 (538-587)||(41862467-41862516)
chr4 (717-801)||(42345272-42345351)
chr4 (750-801)||(22673357-22673407)
chr4 (750-801)||(41863128-41863178)
chr4 (750-801)||(52679804-52679854)
chr4 (717-782)||(41862024-41862085)
chr4 (717-782)||(41862115-41862176)
chr4 (717-797)||(16905870-16905945)
chr4 (717-797)||(21380354-21380429)
chr4 (717-797)||(28380292-28380367)
chr4 (752-801)||(30390792-30390840)
chr4 (717-801)||(53285797-53285876)
[»] chr3 (39 HSPs)
chr3 (522-610)||(18199259-18199352)
chr3 (522-610)||(36094000-36094093)
chr3 (522-610)||(36094191-36094284)
chr3 (523-587)||(851130-851194)
chr3 (750-832)||(854986-855067)
chr3 (522-587)||(26943801-26943866)
chr3 (626-782)||(18199247-18199394)
chr3 (626-782)||(36093958-36094105)
chr3 (524-610)||(18256810-18256901)
chr3 (522-587)||(26943610-26943675)
chr3 (750-823)||(36093827-36093899)
chr3 (626-782)||(36094149-36094296)
chr3 (750-823)||(26949149-26949221)
chr3 (626-676)||(26943789-26943839)
chr3 (717-808)||(6953260-6953346)
chr3 (717-823)||(18199424-18199525)
chr3 (717-806)||(6953401-6953485)
chr3 (626-676)||(26943598-26943648)
chr3 (752-801)||(855137-855185)
chr3 (522-587)||(52419585-52419649)
chr3 (626-677)||(851117-851168)
chr3 (549-610)||(855059-855125)
chr3 (717-806)||(6953540-6953624)
chr3 (717-806)||(6953783-6953867)
chr3 (717-806)||(36947974-36948058)
chr3 (717-801)||(35713175-35713254)
chr3 (717-801)||(47724586-47724665)
chr3 (750-806)||(36947835-36947890)
chr3 (750-801)||(35860506-35860556)
chr3 (750-801)||(36094888-36094938)
chr3 (750-801)||(36095103-36095153)
chr3 (750-801)||(49565969-49566019)
chr3 (717-806)||(6953644-6953728)
chr3 (752-801)||(1883317-1883365)
chr3 (524-610)||(6953848-6953937)
chr3 (640-677)||(18256864-18256901)
chr3 (717-801)||(26943970-26944049)
chr3 (717-797)||(31483635-31483710)
chr3 (562-610)||(49566029-49566082)
[»] chr7 (27 HSPs)
chr7 (522-610)||(13927081-13927173)
chr7 (522-610)||(22004230-22004323)
chr7 (522-610)||(22004421-22004514)
chr7 (750-832)||(13927303-13927384)
chr7 (522-610)||(7891198-7891291)
chr7 (717-823)||(7891363-7891464)
chr7 (717-823)||(22004586-22004687)
chr7 (626-782)||(22004409-22004556)
chr7 (626-832)||(13927069-13927257)
chr7 (717-823)||(3061539-3061640)
chr7 (626-782)||(7891186-7891333)
chr7 (626-782)||(22004218-22004365)
chr7 (717-801)||(13927421-13927500)
chr7 (750-823)||(29954313-29954385)
chr7 (537-610)||(3600056-3600132)
chr7 (752-823)||(31098022-31098092)
chr7 (717-801)||(5091068-5091147)
chr7 (717-801)||(13400667-13400746)
chr7 (750-801)||(7890806-7890856)
chr7 (750-801)||(22003574-22003624)
chr7 (750-801)||(32656853-32656903)
chr7 (717-782)||(3600143-3600204)
chr7 (717-801)||(7884973-7885052)
chr7 (562-610)||(7890743-7890796)
chr7 (717-797)||(20959367-20959442)
chr7 (528-587)||(29954217-29954275)
chr7 (717-797)||(45112747-45112822)
[»] scaffold0121 (3 HSPs)
scaffold0121 (522-610)||(41147-41240)
scaffold0121 (626-782)||(41135-41282)
scaffold0121 (750-823)||(41432-41504)
[»] scaffold0119 (4 HSPs)
scaffold0119 (522-572)||(29223-29273)
scaffold0119 (522-572)||(35476-35526)
scaffold0119 (638-677)||(29234-29273)
scaffold0119 (638-677)||(35487-35526)
[»] chr8 (7 HSPs)
chr8 (750-823)||(18489712-18489784)
chr8 (750-801)||(22732183-22732233)
chr8 (717-801)||(41377785-41377864)
chr8 (750-801)||(18489994-18490044)
chr8 (750-801)||(21637125-21637175)
chr8 (750-801)||(24011185-24011235)
chr8 (717-797)||(37985423-37985498)
[»] scaffold0097 (1 HSPs)
scaffold0097 (717-801)||(44607-44686)


Alignment Details
Target: chr1 (Bit Score: 379; Significance: 0; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 8 - 456
Target Start/End: Original strand, 51487360 - 51487809
Alignment:
Q  8 ggagaaaccaatgatccagtgtaaacatatgttagaaatccaactgggaatgtacannnnnnnagttagttgattaggttcggtgaatttcatgttcttt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| ||||||| ||| |||||||||||    
T  51487360 ggagaaaccaatgatccagtgtaaacatatgttagaaatccaactgggaatgtacatttttttagttagttgattacgttcggt-aatctcatgttcttt 51487458  T
Q  108 ttagcaactgtaggaatggttccatattgtattttatctggcgcaccttgatttggtacatctgaaacattatttaccgacttgttttgtaatgctgtgt 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  51487459 ttagcaactgtaggaatggttccatattgtattttatctggcgcaccttgatttgggacatctgaaacattatttaccgacttgttttgtaatgctgtgt 51487558  T
Q  208 atttaagtgtccctaactcgtatacctagacgctagttcatgctcacatcaaattcttggtttgattcaagtttaccggcagatgcgattaatttccgaa 307  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51487559 atttaagtgtccctaactcgtatacctagatgctagttcatgctcacatcaaattcttggtttgattcaagtttaccggcagatgcgattaatttccgaa 51487658  T
Q  308 tgcatgatgatgagattatatgttgcccttaaatttaatgcagcatgttttgcaaaatgtgggaattgcttttttgatgtcatgtcctgtgattgttatt 407  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  51487659 tgcatgatgatgagattctatgttgcccttaaatttaatgcagcatgttttgcaaaatgtgggaattgcttttttgatgtcatgtcctgtgaatgttttt 51487758  T
Q  408 gtcatactaata--tataaagtacagttgagcctttagtgaaagaaactat 456  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||||||    
T  51487759 gtcatactaatactaataaagtacagttgagcctttagtgaaagaaactat 51487809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 613 - 832
Target Start/End: Complemental strand, 45507557 - 45507348
Alignment:
Q  613 aatctcttattcctaaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacg 712  Q
    ||||| |||||  ||||||||||||||||| |||||||| ||||||||||||| |||| ||  | ||||| | ||||||| | |||| | |||||| ||     
T  45507557 aatcttttatttataaacctaacattgttgtcctaattc-acctaatatttaacctaaaaatattgtagcca-tttttcctttcttcaa-aaccta-act 45507462  T
Q  713 atattttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttg 812  Q
    |||||| |||||||||||||| |||| |  |||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||    
T  45507461 atattt-cctaattcccctcc-tccaaa--ccctaacc-atgatttcctaatttccctcctcctaaaacc-tacctaattgatttccatattttcttttg 45507368  T
Q  813 ccatattttttaccttaaaa 832  Q
    ||||||||||||||| ||||    
T  45507367 ccatattttttacctaaaaa 45507348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 522 - 610
Target Start/End: Complemental strand, 35597850 - 35597757
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaac-----catatttcctaatttccctcctcc 610  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||     |||||||||||||| |||||||||    
T  35597850 tgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaatcatatttcctaattcccctcctcc 35597757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 522 - 610
Target Start/End: Complemental strand, 35598285 - 35598192
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  35598285 tgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 35598192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 519 - 610
Target Start/End: Complemental strand, 39514339 - 39514243
Alignment:
Q  519 caatgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  39514339 caatgttgccctagttccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 39514243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 717 - 818
Target Start/End: Complemental strand, 45507309 - 45507213
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccat 816  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||    
T  45507309 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaatttccctcctcctaaaacc-tacctaattgatttccatattttcttttgccat 45507215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 522 - 610
Target Start/End: Complemental strand, 2052194 - 2052101
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    |||||||||||||||| |||||||||||||||||||||| |||| ||||||| |||||||||     ||||||||||||||||| |||||||||    
T  2052194 tgttgccctaattccaactaatatttaacctaaaaaattatagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctcc 2052101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 519 - 587
Target Start/End: Complemental strand, 38211879 - 38211811
Alignment:
Q  519 caatgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 587  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||    
T  38211879 caatgttgcactaattccacctaatatttaacctaaaaaattgtagccatttttccctcctttaaaacc 38211811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 717 - 823
Target Start/End: Complemental strand, 2052029 - 2051928
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccat 816  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||||||| |||||||||||||| || ||||||||||||||| |||||| |||||||    
T  2052029 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaatttccctcctcctaaaacc-tatctaattgatttccatattttctgttgccat 2051935  T
Q  817 atttttt 823  Q
    |||||||    
T  2051934 atttttt 2051928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 613 - 782
Target Start/End: Complemental strand, 35598310 - 35598150
Alignment:
Q  613 aatctcttattcctaaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacg 712  Q
    ||||| |||||  |||||||||||||||||||||||||||||||||||||||| |||| |||||  |||| || |||||| |||||| | |||||| ||     
T  35598310 aatcttttatttataaacctaacattgttgccctaattccacctaatatttaacctaaaaaatt-atagccac-ttttccctccttc-aaaaccta-acc 35598215  T
Q  713 atattttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    ||| ||||||||||||||| |||||  || |||||| |||||||||||||||||| ||||| ||||||||    
T  35598214 ata-tttcctaattcccct-cctcc--aaaccctaa-ccatgatttcctaatttccctcctactaaaacc 35598150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 750 - 823
Target Start/End: Complemental strand, 35597714 - 35597642
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccatatttttt 823  Q
    |||||||||||||||||  |||||||||||||| || ||||||||||||||| |||||| ||||||||||||||    
T  35597714 ccatgatttcctaattttcctcctcctaaaacc-tatctaattgatttccatattttctgttgccatatttttt 35597642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 626 - 782
Target Start/End: Complemental strand, 39514348 - 39514201
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    ||||||||||| |||||||||| ||||||||||||||||| |||| |||||  |||| || |||||| |||||| | |||||| || ||| |||||||||    
T  39514348 taaacctaacaatgttgccctagttccacctaatatttaacctaaaaaatt-atagccac-ttttccctccttc-aaaaccta-accata-tttcctaat 39514254  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    |||||| |||||  || |||||| |||||||||||||||||| ||||||||||||||    
T  39514253 tcccct-cctcc--aaaccctaa-ccatgatttcctaatttccctcctcctaaaacc 39514201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 453 - 517
Target Start/End: Original strand, 51488700 - 51488769
Alignment:
Q  453 ctatatcgacagaaactcgatacttccctat-----attctacacaaaagtataatgatattggaataca 517  Q
    |||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||| ||||    
T  51488700 ctatatcgacagaaactcgatacttccctatgttatattctacacaaaagtataatgatattggattaca 51488769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 626 - 782
Target Start/End: Complemental strand, 2052206 - 2052059
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| |||||  |||| || |||||  |||||| | |||||| || ||| |||||||||    
T  2052206 taaacctaacattgttgccctaattccaactaatatttaacctaaaaaatt-atagccac-ttttctctccttc-aaaaccta-accata-tttcctaat 2052112  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    |||||| |||||  || |||||| |||||||||||||||||| |||||| |||||||    
T  2052111 tcccct-cctcc--aaaccctaa-ccatgatttcctaatttccctcctcttaaaacc 2052059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 612 - 676
Target Start/End: Complemental strand, 35597876 - 35597812
Alignment:
Q  612 aaatctcttattcctaaacctaacattgttgccctaattccacctaatatttaagctaagaaatt 676  Q
    |||||| |||||  ||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  35597876 aaatcttttatttataaacctaaaattgttgccctaattccacctaatatttaacctaaaaaatt 35597812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 750 - 816
Target Start/End: Complemental strand, 35598091 - 35598026
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccat 816  Q
    |||||||||||||||||  |||||||||||| |||| ||||||||||||||| |||||| |||||||    
T  35598091 ccatgatttcctaattttcctcctcctaaaa-cctatctaattgatttccatattttctgttgccat 35598026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 610
Target Start/End: Complemental strand, 45507356 - 45507290
Alignment:
Q  549 acctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    ||||||||||||||||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  45507356 acctaaaaaattgtagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 45507290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 626 - 677
Target Start/End: Complemental strand, 38211888 - 38211837
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattg 677  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||| ||||||    
T  38211888 taaacctaacaatgttgcactaattccacctaatatttaacctaaaaaattg 38211837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 610
Target Start/End: Complemental strand, 45507532 - 45507439
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaa-attgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc 610  Q
    ||||| |||||||| ||||||||||||||||||||| |||||||| | |||||| | ||||||||||     ||||||||||||| |||||||||    
T  45507532 tgttgtcctaattc-acctaatatttaacctaaaaatattgtagccatttttcctttcttcaaaacctaactatatttcctaattcccctcctcc 45507439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 15689421 - 15689500
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  15689421 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 15689500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Original strand, 2585478 - 2585528
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  2585478 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 2585528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Complemental strand, 45507099 - 45507049
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  45507099 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 45507049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Original strand, 48958628 - 48958678
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  48958628 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 48958678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 7476058 - 7476137
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| ||  ||| |||||||| |||||||||||| ||| |||| ||||||| |||| |||||||||||||||    
T  7476058 tttcctaattcccctcc-tc--gaaaccctaacc-atgatttcctaacttcactccccctaaaa-cctatctaattgatttccat 7476137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 7476619 - 7476698
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| ||  ||| |||||||| |||||||||||| ||| |||| ||||||| |||| |||||||||||||||    
T  7476619 tttcctaattcccctcc-tc--gaaaccctaacc-atgatttcctaacttcactccccctaaaa-cctatctaattgatttccat 7476698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 9530085 - 9530164
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| ||  ||| |||||||| |||||||||||| ||| |||| ||||||| |||| |||||||||||||||    
T  9530085 tttcctaattcccctcc-tc--gaaaccctaacc-atgatttcctaacttcactccccctaaaa-cctatctaattgatttccat 9530164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 752 - 801
Target Start/End: Original strand, 15689290 - 15689338
Alignment:
Q  752 atgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  15689290 atgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 15689338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 22194909 - 22194988
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||| ||||||    
T  22194909 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgaattccat 22194988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 797
Target Start/End: Original strand, 36455256 - 36455331
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgattt 797  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||    
T  36455256 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgattt 36455331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 42492504 - 42492583
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| ||  ||| |||||||| |||||||||||| ||| |||| ||||||| |||| |||||||||||||||    
T  42492504 tttcctaattcccctcc-tc--gaaaccctaacc-atgatttcctaacttcactccccctaaaa-cctatctaattgatttccat 42492583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 797
Target Start/End: Original strand, 48647785 - 48647860
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgattt 797  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||    
T  48647785 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgattt 48647860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 86; Significance: 1e-40; HSPs: 5)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 612 - 832
Target Start/End: Original strand, 36013 - 36223
Alignment:
Q  612 aaatctcttattcctaaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagac 711  Q
    |||||| |||||  ||||||||||| |||||||||||||||||||||||||||| |||| |||||| |||| |||||| || |||||| | |||||| ||    
T  36013 aaatcttttatttataaacctaacactgttgccctaattccacctaatatttaacctaaaaaattg-tagccacttttccc-tccttcaa-aaccta-ac 36108  T
Q  712 gatattttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttctttt 811  Q
     |||||| |||||||||| ||| |||| |  |||||||| |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  36109 catattt-cctaattcccatcc-tccaaa--ccctaacc-atgatttcctaatttccctcctcctaaaacc-tacttaattgatttccatcttttctttt 36202  T
Q  812 gccatattttttaccttaaaa 832  Q
    |||||||||||||||| ||||    
T  36203 gccatattttttacctaaaaa 36223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 522 - 610
Target Start/End: Original strand, 36039 - 36132
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc 610  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     ||||||||||||| || ||||||    
T  36039 tgttgccctaattccacctaatatttaacctaaaaaattgtagccacttttccctccttcaaaacctaaccatatttcctaattcccatcctcc 36132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 750 - 832
Target Start/End: Original strand, 36290 - 36371
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccatattttttaccttaaaa 832  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  36290 ccatgatttcctaatttccctcctcctaaaacc-tacctaattgattttcatattttcttttgccatattttttacctaaaaa 36371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 587
Target Start/End: Original strand, 36363 - 36401
Alignment:
Q  549 acctaaaaaattgtagctacttttccctccttcaaaacc 587  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  36363 acctaaaaaattgtagccacttttccctccttcaaaacc 36401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 610
Target Start/End: Original strand, 36215 - 36281
Alignment:
Q  549 acctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    ||||||||||||||| | |||||||||||||| ||     ||||||||||||||||| |||||||||    
T  36215 acctaaaaaattgtacccacttttccctcctttaaaacctaaccatatttcctaattcccctcctcc 36281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 2e-36; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 611 - 832
Target Start/End: Complemental strand, 1925799 - 1925588
Alignment:
Q  611 taaatctcttattcctaaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctaga 710  Q
    ||||||| |||||  ||||||||||| |||||||||||||||||||||||||||| |||| |||||| ||| ||||||| || |||||| | |||||| |    
T  1925799 taaatcttttatttataaacctaacactgttgccctaattccacctaatatttaacctaaaaaattg-tagatacttttccc-tccttcaa-aaccta-a 1925704  T
Q  711 cgatattttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttt 810  Q
    | |||||| | |||||||||||| |||| |  |||||||| || ||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||    
T  1925703 ccatattt-cataattcccctcc-tccaaa--ccctaacc-attatttcctaatttccctcctcctaaaacc-tacctaattgatttccatattttcttt 1925610  T
Q  811 tgccatattttttaccttaaaa 832  Q
    | ||||||||||||||| ||||    
T  1925609 ttccatattttttacctaaaaa 1925588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 638 - 827
Target Start/End: Complemental strand, 35433268 - 35433089
Alignment:
Q  638 tgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaattcccctccctcc 737  Q
    |||||||||||||||||||||||||||| |||| || ||| |||| |||||| || |||||| | |||||| || |||||| | |||||||||||| |||    
T  35433268 tgttgccctaattccacctaatatttaacctaaaaagttg-tagccacttttccc-tccttcaa-aaccta-accatattt-cttaattcccctcc-tcc 35433175  T
Q  738 agaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccatattttttacct 827  Q
    | |  |||||||| |||||||||||||||| |||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||    
T  35433174 aaa--ccctaacc-atgatttcctaatttccctcctcctaaaacc-tacctaattgattttcatattttcttttgccatattttttacct 35433089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 522 - 587
Target Start/End: Complemental strand, 1925772 - 1925707
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 587  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1925772 tgttgccctaattccacctaatatttaacctaaaaaattgtagatacttttccctccttcaaaacc 1925707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 521 - 587
Target Start/End: Complemental strand, 35433269 - 35433203
Alignment:
Q  521 atgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 587  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  35433269 atgttgccctaattccacctaatatttaacctaaaaagttgtagccacttttccctccttcaaaacc 35433203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 522 - 610
Target Start/End: Original strand, 13899815 - 13899908
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    |||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  13899815 tgttgccctaattccaccgaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattaccctcctcc 13899908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 522 - 610
Target Start/End: Original strand, 13905713 - 13905806
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    |||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  13905713 tgttgccctaattccacctaatatttaacccaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 13905806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 626 - 817
Target Start/End: Complemental strand, 27999795 - 27999614
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||  ||||||||||||||||||||||||||| |||| |||||| |||| |||||| || |||||| | |||||| || |||||| | | ||    
T  27999795 taaacctaacaccgttgccctaattccacctaatatttaacctaaaaaattg-tagccacttttccc-tccttc-ataaccta-accatattt-catgat 27999701  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccata 817  Q
    |||||||| |||| |  |||||| | |||||||||||||||| ||| |||||||||| |||||||||||||||||| |||||||||||||||    
T  27999700 tcccctcc-tccaaa--ccctaatc-atgatttcctaatttccctcatcctaaaacc-tacctaattgatttccatattttcttttgccata 27999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 523 - 587
Target Start/End: Complemental strand, 27999782 - 27999718
Alignment:
Q  523 gttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 587  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  27999782 gttgccctaattccacctaatatttaacctaaaaaattgtagccacttttccctccttcataacc 27999718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 626 - 817
Target Start/End: Complemental strand, 28090529 - 28090348
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||  ||||||||||||||||||||||||||| |||| |||||| |||| |||||| || |||||| | |||||| || |||||| | | ||    
T  28090529 taaacctaacaccgttgccctaattccacctaatatttaacctaaaaaattg-tagccacttttccc-tccttc-ataaccta-accatattt-catgat 28090435  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccata 817  Q
    |||||||| |||| |  |||||| | |||||||||||||||| ||| |||||||||| |||||||||||||||||| |||||||||||||||    
T  28090434 tcccctcc-tccaaa--ccctaatc-atgatttcctaatttccctcatcctaaaacc-tacctaattgatttccatattttcttttgccata 28090348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 523 - 587
Target Start/End: Complemental strand, 28090516 - 28090452
Alignment:
Q  523 gttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 587  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  28090516 gttgccctaattccacctaatatttaacctaaaaaattgtagccacttttccctccttcataacc 28090452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 626 - 817
Target Start/End: Complemental strand, 28096852 - 28096671
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||  ||||||||||||||||||||||||||| |||| |||||| |||| |||||| || |||||| | |||||| || |||||| | | ||    
T  28096852 taaacctaacaccgttgccctaattccacctaatatttaacctaaaaaattg-tagccacttttccc-tccttc-ataaccta-accatattt-catgat 28096758  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccata 817  Q
    |||||||| |||| |  |||||| | |||||||||||||||| ||| |||||||||| |||||||||||||||||| |||||||||||||||    
T  28096757 tcccctcc-tccaaa--ccctaatc-atgatttcctaatttccctcatcctaaaacc-tacctaattgatttccatattttcttttgccata 28096671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 523 - 587
Target Start/End: Complemental strand, 28096839 - 28096775
Alignment:
Q  523 gttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 587  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  28096839 gttgccctaattccacctaatatttaacctaaaaaattgtagccacttttccctccttcataacc 28096775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 522 - 610
Target Start/End: Original strand, 26453350 - 26453443
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    |||||||||||||||| |||||||||||||||||||||| |||| ||||||| |||||||||     ||||||||||||||||| |||||||||    
T  26453350 tgttgccctaattccaactaatatttaacctaaaaaattatagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctcc 26453443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 522 - 610
Target Start/End: Original strand, 40603186 - 40603279
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    |||||||||||||||| |||||||||||||||||||||| |||| ||||||| |||||||||     ||||||||||||||||| |||||||||    
T  40603186 tgttgccctaattccaactaatatttaacctaaaaaattatagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctcc 40603279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 717 - 823
Target Start/End: Original strand, 40603350 - 40603451
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccat 816  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||||||| |||||||||||||| || ||||||||||||||| |||||| |||||||    
T  40603350 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaatttccctcctcctaaaacc-tatctaattgatttccatattttctgttgccat 40603444  T
Q  817 atttttt 823  Q
    |||||||    
T  40603445 atttttt 40603451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 626 - 782
Target Start/End: Original strand, 13905701 - 13905848
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||||||||||||||||||||||||||||||| | || |||||  |||| || |||||| |||||| | |||||| || ||| |||||||||    
T  13905701 taaacctaacattgttgccctaattccacctaatatttaacccaaaaaatt-atagccac-ttttccctccttc-aaaaccta-accata-tttcctaat 13905795  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    |||||| |||||  || |||||| |||||||||||||||||| ||||||||||||||    
T  13905796 tcccct-cctcc--aaaccctaa-ccatgatttcctaatttccctcctcctaaaacc 13905848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 717 - 823
Target Start/End: Original strand, 13905878 - 13905979
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccat 816  Q
    ||||||||||||||||| |||| |  |||||||| || ||||||||||||| |||||||||||||| || ||||||||||||||| |||||| |||||||    
T  13905878 tttcctaattcccctcc-tccaaa--ccctaacc-atcatttcctaatttccctcctcctaaaacc-tatctaattgatttccatattttctgttgccat 13905972  T
Q  817 atttttt 823  Q
    |||||||    
T  13905973 atttttt 13905979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 717 - 823
Target Start/End: Original strand, 26453515 - 26453616
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccat 816  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||||||| |||||||||||| |||| ||||||||||||||| |||||| ||||||     
T  26453515 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaatttccctcctcctaaaa-cctatctaattgatttccatattttctgttgccac 26453609  T
Q  817 atttttt 823  Q
    |||||||    
T  26453610 atttttt 26453616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 522 - 572
Target Start/End: Original strand, 1271964 - 1272014
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctactttt 572  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1271964 tgttgccctaattccacctaatatttaacctaaaaaattgtagccactttt 1272014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 626 - 782
Target Start/End: Original strand, 13899803 - 13899950
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| |||||  |||| || |||||| |||||| | |||||| || ||| |||||||||    
T  13899803 taaacctaacattgttgccctaattccaccgaatatttaacctaaaaaatt-atagccac-ttttccctccttc-aaaaccta-accata-tttcctaat 13899897  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    | |||| |||||  || |||||| |||||||||||||||||| ||||||||||||||    
T  13899898 taccct-cctcc--aaaccctaa-ccatgatttcctaatttccctcctcctaaaacc 13899950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 522 - 587
Target Start/End: Complemental strand, 35433353 - 35433288
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 587  Q
    ||||||||||||||||||||||||||||  |||||| ||||||| ||||||| |||||||||||||    
T  35433353 tgttgccctaattccacctaatatttaatttaaaaagttgtagccacttttctctccttcaaaacc 35433288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 523 - 573
Target Start/End: Complemental strand, 27999904 - 27999854
Alignment:
Q  523 gttgccctaattccacctaatatttaacctaaaaaattgtagctacttttc 573  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  27999904 gttgccctaattccacctaatatttaacctaaaaaattgtaaccacttttc 27999854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 523 - 573
Target Start/End: Complemental strand, 28090638 - 28090588
Alignment:
Q  523 gttgccctaattccacctaatatttaacctaaaaaattgtagctacttttc 573  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  28090638 gttgccctaattccacctaatatttaacctaaaaaattgtaaccacttttc 28090588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 523 - 573
Target Start/End: Complemental strand, 28096961 - 28096911
Alignment:
Q  523 gttgccctaattccacctaatatttaacctaaaaaattgtagctacttttc 573  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  28096961 gttgccctaattccacctaatatttaacctaaaaaattgtaaccacttttc 28096911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 626 - 782
Target Start/End: Original strand, 26453338 - 26453485
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| |||||  |||| || |||||  |||||| | |||||| || ||| |||||||||    
T  26453338 taaacctaacattgttgccctaattccaactaatatttaacctaaaaaatt-atagccac-ttttctctccttc-aaaaccta-accata-tttcctaat 26453432  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    |||||| |||||  || |||||| |||||||||||||||||| |||||| |||||||    
T  26453433 tcccct-cctcc--aaaccctaa-ccatgatttcctaatttccctcctcttaaaacc 26453485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 717 - 821
Target Start/End: Original strand, 32287445 - 32287544
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccat 816  Q
    ||||||||||||||||| |||| |  |||||||| ||||| |||||||||| |||||||||||||  || ||||||||||||||| |||||| |||||||    
T  32287445 tttcctaattcccctcc-tccaaa--ccctaacc-atgatctcctaatttccctcctcctaaaact-tatctaattgatttccatattttctgttgccat 32287539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 626 - 782
Target Start/End: Original strand, 40603174 - 40603321
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| |||||  |||| || |||||  |||||| | |||||| || ||| |||||||||    
T  40603174 taaacctaacattgttgccctaattccaactaatatttaacctaaaaaatt-atagccac-ttttctctccttc-aaaaccta-accata-tttcctaat 40603268  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    |||||| |||||  || |||||| |||||||||||||||||| |||||| |||||||    
T  40603269 tcccct-cctcc--aaaccctaa-ccatgatttcctaatttccctcctcttaaaacc 40603321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 626 - 677
Target Start/End: Complemental strand, 27999917 - 27999866
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattg 677  Q
    |||||||||||  ||||||||||||||||||||||||||| |||| ||||||    
T  27999917 taaacctaacaccgttgccctaattccacctaatatttaacctaaaaaattg 27999866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 626 - 677
Target Start/End: Complemental strand, 28090651 - 28090600
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattg 677  Q
    |||||||||||  ||||||||||||||||||||||||||| |||| ||||||    
T  28090651 taaacctaacaccgttgccctaattccacctaatatttaacctaaaaaattg 28090600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 626 - 677
Target Start/End: Complemental strand, 28096974 - 28096923
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattg 677  Q
    |||||||||||  ||||||||||||||||||||||||||| |||| ||||||    
T  28096974 taaacctaacaccgttgccctaattccacctaatatttaacctaaaaaattg 28096923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 717 - 806
Target Start/End: Original strand, 32287306 - 32287390
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatctttt 806  Q
    ||||||||||||||||| |||| |  |||||||| ||||||||||||||||  ||||||||||| |||| ||||||||||||||| ||||    
T  32287306 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaatttccatcctcctaaaa-cctatctaattgatttccatatttt 32287390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 610
Target Start/End: Complemental strand, 35433092 - 35433026
Alignment:
Q  549 acctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    |||||||| |||||||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  35433092 acctaaaatattgtagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 35433026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 717 - 801
Target Start/End: Complemental strand, 36440156 - 36440077
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  36440156 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 36440077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 750 - 806
Target Start/End: Original strand, 32287071 - 32287126
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatctttt 806  Q
    ||||||||| |||||||| |||||||||||| |||| ||||||||||||||| ||||    
T  32287071 ccatgattttctaatttccctcctcctaaaa-cctatctaattgatttccatatttt 32287126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 677
Target Start/End: Original strand, 1271964 - 1272003
Alignment:
Q  638 tgttgccctaattccacctaatatttaagctaagaaattg 677  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  1271964 tgttgccctaattccacctaatatttaacctaaaaaattg 1272003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Original strand, 13899159 - 13899209
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  13899159 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 13899209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Complemental strand, 21591208 - 21591158
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  21591208 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 21591158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Original strand, 26452958 - 26453008
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  26452958 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 26453008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Original strand, 40602794 - 40602844
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  40602794 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 40602844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 587
Target Start/End: Complemental strand, 1925596 - 1925558
Alignment:
Q  549 acctaaaaaattgtagctacttttccctccttcaaaacc 587  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  1925596 acctaaaaaattgtagccacttttctctccttcaaaacc 1925558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 180240 - 180319
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| ||  ||| |||||||| |||||||||||| ||| |||| ||||||| |||| |||||||||||||||    
T  180240 tttcctaattcccctcc-tc--gaaaccctaacc-atgatttcctaacttcactccccctaaaa-cctatctaattgatttccat 180319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Complemental strand, 980076 - 979997
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| ||  ||| |||||||| |||||||||||| ||| |||| ||||||| |||| |||||||||||||||    
T  980076 tttcctaattcccctcc-tc--gaaaccctaacc-atgatttcctaacttcactccccctaaaa-cctatctaattgatttccat 979997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Complemental strand, 980324 - 980245
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| ||  ||| |||||||| |||||||||||| ||| |||| ||||||| |||| |||||||||||||||    
T  980324 tttcctaattcccctcc-tc--gaaaccctaacc-atgatttcctaacttcactccccctaaaa-cctatctaattgatttccat 980245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Complemental strand, 980529 - 980450
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| ||  ||| |||||||| |||||||||||| ||| |||| ||||||| |||| |||||||||||||||    
T  980529 tttcctaattcccctcc-tc--gaaaccctaacc-atgatttcctaacttcactccccctaaaa-cctatctaattgatttccat 980450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 2444153 - 2444232
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| ||  ||| |||||||| |||||||||||| ||| |||| ||||||| |||| |||||||||||||||    
T  2444153 tttcctaattcccctcc-tc--gaaaccctaacc-atgatttcctaacttcactccccctaaaa-cctatctaattgatttccat 2444232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 752 - 801
Target Start/End: Original strand, 14039778 - 14039826
Alignment:
Q  752 atgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  14039778 atgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 14039826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 19640940 - 19641019
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||| ||||||    
T  19640940 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgaattccat 19641019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 19839533 - 19839612
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||| ||||||    
T  19839533 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgaattccat 19839612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 610
Target Start/End: Original strand, 26452895 - 26452948
Alignment:
Q  562 tagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc 610  Q
    |||| |||||||||||||||||||||     |||||||||||||||||||||||    
T  26452895 tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcctcc 26452948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 632 - 665
Target Start/End: Complemental strand, 35433359 - 35433326
Alignment:
Q  632 taacattgttgccctaattccacctaatatttaa 665  Q
    ||||| ||||||||||||||||||||||||||||    
T  35433359 taacactgttgccctaattccacctaatatttaa 35433326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 1e-34; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 626 - 832
Target Start/End: Original strand, 20844892 - 20845088
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    ||||||||||| |||||||||||||||||||||||||||| |||| |||||| |||| ||||||||| |||||| | |||||| || |||||| ||||||    
T  20844892 taaacctaacactgttgccctaattccacctaatatttaacctaaaaaattg-tagccactttttcc-tccttcaa-aaccta-acaatattt-cctaat 20844986  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccatattttttac 825  Q
    |||| ||| |||| |  |||||||  |||||||||||||||  |||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||    
T  20844987 tcccttcc-tccaaa--ccctaact-atgatttcctaatttacctcctcctaaaacc-tacctaattgatttccatattttcttttgccatattttctac 20845081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 626 - 832
Target Start/End: Original strand, 20844648 - 20844844
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    ||||||||||| |||||||||||||||||||||||||||| |||| ||||||   | |  ||||||| || ||| | |||||| ||||||||| ||||||    
T  20844648 taaacctaacactgttgccctaattccacctaatatttaacctaaaaaattgt--ggtcatttttccctcattcaa-aaccta-acgatattt-cctaat 20844742  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccatattttttac 825  Q
    |||||||| |||| |  |||||||| |||||||||||||||  |||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||    
T  20844743 tcccctcc-tccaaa--ccctaacc-atgatttcctaattttcctcctcctaaaacc-tacctaattgatttccatattttcttatgccatattttttac 20844837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 612 - 832
Target Start/End: Original strand, 20842236 - 20842446
Alignment:
Q  612 aaatctcttattcctaaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagac 711  Q
    |||||| |||||  ||||| ||||| || ||| |||||||||||||||||||||  ||| ||||| ||||| | ||||||| |||||| | |||||| ||    
T  20842236 aaatcttttatttataaacgtaacactgctgctctaattccacctaatatttaacttaaaaaatt-gtagcca-tttttccctccttc-aaaaccta-ac 20842331  T
Q  712 gatattttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttctttt 811  Q
     ||| ||||||||||||||| |||||  || |||||| |||||||||||||||||| || ||||||||| |||||||||||||||||||| |||||||||    
T  20842332 aata-tttcctaattcccct-cctcc--aaaccctaa-ccatgatttcctaatttcccttctcctaaaa-cctacctaattgatttccatattttctttt 20842425  T
Q  812 gccatattttttaccttaaaa 832  Q
    |||||||||||||||| ||||    
T  20842426 gccatattttttacctaaaaa 20842446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 522 - 610
Target Start/End: Original strand, 23179256 - 23179349
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  23179256 tgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 23179349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 522 - 610
Target Start/End: Original strand, 23179447 - 23179540
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  23179447 tgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 23179540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 522 - 587
Target Start/End: Original strand, 20844904 - 20844969
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 587  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  20844904 tgttgccctaattccacctaatatttaacctaaaaaattgtagccactttttcctccttcaaaacc 20844969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 750 - 823
Target Start/End: Original strand, 20844516 - 20844588
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccatatttttt 823  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||| |||||||||    
T  20844516 ccatgatttcctaatttccctcctcctaaaacc-tacctaattgatttccatattttcttttgcaatatttttt 20844588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 626 - 782
Target Start/End: Original strand, 23179435 - 23179582
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||  |||| || |||||| |||||| | |||||| || ||| |||||||||    
T  23179435 taaacctaacattgttgccctaattccacctaatatttaacctaaaaaatt-atagccac-ttttccctccttc-aaaaccta-accata-tttcctaat 23179529  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    |||||| |||||  || |||||| |||||||||||||||||| ||||||||||||||    
T  23179530 tcccct-cctcc--aaaccctaa-ccatgatttcctaatttccctcctcctaaaacc 23179582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 717 - 823
Target Start/End: Original strand, 32672872 - 32672973
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccat 816  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||||||| |||||||||||||| || ||||||||||||||| |||||| |||||||    
T  32672872 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaatttccctcctcctaaaacc-tatctaattgatttccatattttctgttgccat 32672966  T
Q  817 atttttt 823  Q
    |||||||    
T  32672967 atttttt 32672973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 529 - 610
Target Start/End: Original strand, 20842269 - 20842355
Alignment:
Q  529 ctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc 610  Q
    |||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||     ||||||||||||| |||||||||    
T  20842269 ctaattccacctaatatttaacttaaaaaattgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctcc 20842355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 522 - 610
Target Start/End: Original strand, 20844660 - 20844753
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc 610  Q
    ||||||||||||||||||||||||||||||||||||||||| |  | ||||||||| |||||||||     ||||||||||||| |||||||||    
T  20844660 tgttgccctaattccacctaatatttaacctaaaaaattgtggtcatttttccctcattcaaaacctaacgatatttcctaattcccctcctcc 20844753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 750 - 823
Target Start/End: Original strand, 23179641 - 23179713
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccatatttttt 823  Q
    |||||||||||||||||| |||||||||||||| || ||||||||||||||| |||||| ||||||||||||||    
T  23179641 ccatgatttcctaatttccctcctcctaaaacc-tatctaattgatttccatattttctgttgccatatttttt 23179713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 626 - 782
Target Start/End: Original strand, 23179244 - 23179391
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||  |||| || |||||| |||||| | |||||| || ||| |||||||||    
T  23179244 taaacctaacattgttgccctaattccacctaatatttaacctaaaaaatt-atagccac-ttttccctccttc-aaaaccta-accata-tttcctaat 23179338  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    ||||||||  ||   | |||||| |||||||||||||||||| ||| ||||||||||    
T  23179339 tcccctcctccc---aaccctaa-ccatgatttcctaatttccctcttcctaaaacc 23179391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 750 - 798
Target Start/End: Original strand, 20842514 - 20842561
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttc 798  Q
    ||||||||| |||||||| |||||||||||| |||||||||||||||||    
T  20842514 ccatgattttctaatttccctcctcctaaaa-cctacctaattgatttc 20842561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Original strand, 23178736 - 23178786
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  23178736 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 23178786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 610
Target Start/End: Original strand, 20844440 - 20844506
Alignment:
Q  549 acctaaaaaattgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc 610  Q
    ||||||||||||||||| | |||||||||||||||||||     ||||||| ||||| |||||||||    
T  20844440 acctaaaaaattgtagccatttttccctccttcaaaacctaaccatatttcataattcccctcctcc 20844506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 587
Target Start/End: Original strand, 20845080 - 20845118
Alignment:
Q  549 acctaaaaaattgtagctacttttccctccttcaaaacc 587  Q
    |||||||||||||| || |||||||||||||||||||||    
T  20845080 acctaaaaaattgtggccacttttccctccttcaaaacc 20845118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 750 - 800
Target Start/End: Original strand, 20845156 - 20845205
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttcca 800  Q
    |||||||||| ||||||| |||||| ||||||| |||||||||||||||||    
T  20845156 ccatgatttcgtaatttccctcctcataaaacc-tacctaattgatttcca 20845205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 12651326 - 12651405
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| ||  ||| |||||||| |||||||||||| ||| |||| ||||||| |||| |||||||||||||||    
T  12651326 tttcctaattcccctcc-tc--gaaaccctaacc-atgatttcctaacttcactccccctaaaa-cctatctaattgatttccat 12651405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 23178449 - 23178528
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| ||  ||| |||||||| |||||||||||| ||| |||| ||||||| |||| |||||||||||||||    
T  23178449 tttcctaattcccctcc-tc--gaaaccctaacc-atgatttcctaacttcactccccctaaaa-cctatctaattgatttccat 23178528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 23180110 - 23180189
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| ||  ||| |||||||| |||||||||||| ||| |||| ||||||| |||| |||||||||||||||    
T  23180110 tttcctaattcccctcc-tc--gaaaccctaacc-atgatttcctaacttcactccccctaaaa-cctatctaattgatttccat 23180189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 23184378 - 23184457
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| ||  ||| |||||||| |||||||||||| ||| |||| ||||||| |||| |||||||||||||||    
T  23184378 tttcctaattcccctcc-tc--gaaaccctaacc-atgatttcctaacttcactccccctaaaa-cctatctaattgatttccat 23184457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 752 - 801
Target Start/End: Original strand, 32672054 - 32672102
Alignment:
Q  752 atgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  32672054 atgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 32672102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 34757372 - 34757451
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| ||  ||| |||||||| |||||||||||| ||| |||| ||||||| |||| |||||||||||||||    
T  34757372 tttcctaattcccctcc-tc--gaaaccctaacc-atgatttcctaacttcactccccctaaaa-cctatctaattgatttccat 34757451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 39874206 - 39874285
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| ||  ||| |||||||| |||||||||||| ||| |||| ||||||| |||| |||||||||||||||    
T  39874206 tttcctaattcccctcc-tc--gaaaccctaacc-atgatttcctaacttcactccccctaaaa-cctatctaattgatttccat 39874285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 6e-27; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 626 - 823
Target Start/End: Original strand, 3589194 - 3589381
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||  |||| | ||||||| |||||| | |||||| || ||||||| |||||    
T  3589194 taaacctaacattgttgccctaattccacctaatatttaacctaaaaaatt-atagcca-tttttccctccttc-aaaaccta-accatatttt-ctaat 3589288  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccatatttttt 823  Q
    |||||| |||||  || |||||| |||||||||||||||||  ||||||||||||  ||| ||||||||||| ||| |||||| ||||||||||||||    
T  3589289 tcccct-cctcc--aaaccctaa-ccatgatttcctaattttcctcctcctaaaa-tctatctaattgattttcatattttctgttgccatatttttt 3589381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 522 - 587
Target Start/End: Original strand, 3589206 - 3589271
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 587  Q
    ||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||    
T  3589206 tgttgccctaattccacctaatatttaacctaaaaaattatagccatttttccctccttcaaaacc 3589271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 717 - 801
Target Start/End: Complemental strand, 29371739 - 29371660
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  29371739 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 29371660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 752 - 801
Target Start/End: Original strand, 24456494 - 24456542
Alignment:
Q  752 atgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  24456494 atgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 24456542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Complemental strand, 33049773 - 33049694
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| ||  ||| |||||||| |||||||||||| ||| |||| ||||||| |||| |||||||||||||||    
T  33049773 tttcctaattcccctcc-tc--gaaaccctaacc-atgatttcctaacttcactccccctaaaa-cctatctaattgatttccat 33049694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 522 - 610
Target Start/End: Complemental strand, 41862341 - 41862248
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  41862341 tgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 41862248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 522 - 610
Target Start/End: Original strand, 22673749 - 22673842
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    |||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  22673749 tgttgccctaattccaactaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 22673842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 522 - 587
Target Start/End: Complemental strand, 41946860 - 41946795
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 587  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  41946860 tgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacc 41946795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 626 - 782
Target Start/End: Complemental strand, 41946872 - 41946723
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatat-tttcctaa 724  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||  |||| || |||||| |||||| | |||||| || |||| ||||||||    
T  41946872 taaacctaacattgttgccctaattccacctaatatttaacctaaaaaatt-atagccac-ttttccctccttc-aaaaccta-accatatatttcctaa 41946777  T
Q  725 ttcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    ||||||| |||||  || |||||| |||||||||||||||||| ||||||||||||||    
T  41946776 ttcccct-cctcc--aaaccctaa-ccatgatttcctaatttccctcctcctaaaacc 41946723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 626 - 782
Target Start/End: Complemental strand, 41862353 - 41862206
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||  |||| || |||||| |||||| | |||||| || ||| |||||||||    
T  41862353 taaacctaacattgttgccctaattccacctaatatttaacctaaaaaatt-atagccac-ttttccctccttc-aaaaccta-accata-tttcctaat 41862259  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    |||||| |||||  || |||||| |||||||||||||||||| ||||||||||||||    
T  41862258 tcccct-cctcc--aaaccctaa-ccatgatttcctaatttccctcctcctaaaacc 41862206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 522 - 610
Target Start/End: Original strand, 52680175 - 52680268
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    |||||||||||||||| |||||||||||||||||||||| |||| ||||||| |||||||||     ||||||||||||||||| |||||||||    
T  52680175 tgttgccctaattccaactaatatttaacctaaaaaattatagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctcc 52680268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 717 - 823
Target Start/End: Complemental strand, 41861994 - 41861893
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccat 816  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||||||| |||||||||||||| || ||||||||||||||| |||||| |||||||    
T  41861994 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaatttccctcctcctaaaacc-tatctaattgatttccatattttctgttgccat 41861900  T
Q  817 atttttt 823  Q
    |||||||    
T  41861899 atttttt 41861893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 717 - 823
Target Start/End: Original strand, 52680340 - 52680441
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccat 816  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||||||| |||||||||||||| || ||||||||||||||| |||||| |||||||    
T  52680340 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaatttccctcctcctaaaacc-tatctaattgatttccatattttctgttgccat 52680434  T
Q  817 atttttt 823  Q
    |||||||    
T  52680435 atttttt 52680441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 626 - 782
Target Start/End: Original strand, 22673737 - 22673884
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| |||||  |||| || |||||| |||||| | |||||| || ||| |||||||||    
T  22673737 taaacctaacattgttgccctaattccaactaatatttaacctaaaaaatt-atagccac-ttttccctccttc-aaaaccta-accata-tttcctaat 22673831  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    |||||| |||||  || |||||| |||| ||||||||||||| ||||||||||||||    
T  22673832 tcccct-cctcc--aaaccctaa-ccataatttcctaatttccctcctcctaaaacc 22673884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 626 - 782
Target Start/End: Original strand, 52680163 - 52680310
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| |||||  |||| || |||||  |||||| | |||||| || ||| |||||||||    
T  52680163 taaacctaacattgttgccctaattccaactaatatttaacctaaaaaatt-atagccac-ttttctctccttc-aaaaccta-accata-tttcctaat 52680257  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    |||||| |||||  || |||||| |||||||||||||||||| |||||| |||||||    
T  52680258 tcccct-cctcc--aaaccctaa-ccatgatttcctaatttccctcctcttaaaacc 52680310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 717 - 823
Target Start/End: Complemental strand, 41946543 - 41946442
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccat 816  Q
    ||||||||||||||||| |||| |  |||||||| |||||||| ||||||  |||||||||||| | || ||||||||||||||| |||||| |||||||    
T  41946543 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcttaattttcctcctcctaaaatc-tatctaattgatttccatattttctgttgccat 41946449  T
Q  817 atttttt 823  Q
    |||||||    
T  41946448 atttttt 41946442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 717 - 801
Target Start/End: Complemental strand, 29363570 - 29363491
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  29363570 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 29363491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 35756457 - 35756536
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  35756457 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 35756536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 538 - 587
Target Start/End: Complemental strand, 41862516 - 41862467
Alignment:
Q  538 cctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 587  Q
    ||||||||||||||||||||||| |||| ||||| ||||| |||||||||    
T  41862516 cctaatatttaacctaaaaaattatagccactttaccctctttcaaaacc 41862467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 42345272 - 42345351
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  42345272 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 42345351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Original strand, 22673357 - 22673407
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  22673357 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 22673407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Complemental strand, 41863178 - 41863128
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  41863178 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 41863128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Original strand, 52679804 - 52679854
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  52679804 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 52679854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 782
Target Start/End: Complemental strand, 41862085 - 41862024
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||||||| ||||||||||||||    
T  41862085 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaatttccctcctcctaaaacc 41862024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 782
Target Start/End: Complemental strand, 41862176 - 41862115
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||||||| ||||||||||||||    
T  41862176 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaatttccctcctcctaaaacc 41862115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 797
Target Start/End: Original strand, 16905870 - 16905945
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgattt 797  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||    
T  16905870 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgattt 16905945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 797
Target Start/End: Original strand, 21380354 - 21380429
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgattt 797  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||    
T  21380354 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgattt 21380429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 797
Target Start/End: Original strand, 28380292 - 28380367
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgattt 797  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||    
T  28380292 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgattt 28380367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 752 - 801
Target Start/End: Complemental strand, 30390840 - 30390792
Alignment:
Q  752 atgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  30390840 atgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 30390792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 53285797 - 53285876
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| | |||||||||||||    
T  53285797 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatccaattgatttccat 53285876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 2e-26; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 522 - 610
Target Start/End: Original strand, 18199259 - 18199352
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  18199259 tgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 18199352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 522 - 610
Target Start/End: Complemental strand, 36094093 - 36094000
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  36094093 tgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 36094000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 522 - 610
Target Start/End: Complemental strand, 36094284 - 36094191
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc 610  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||     ||||||||||||| |||||||||    
T  36094284 tgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaacaatatttcctaattcccctcctcc 36094191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 523 - 587
Target Start/End: Original strand, 851130 - 851194
Alignment:
Q  523 gttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 587  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  851130 gttgccctaattccacctaatatttaacctaaaaaattgtagccacttttccctccttcaaaacc 851194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 750 - 832
Target Start/End: Original strand, 854986 - 855067
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccatattttttaccttaaaa 832  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||| ||||    
T  854986 ccatgatttcctaatttccctcctcctaaaacc-tacataattgatttccatattttcttttgccatattttttacctaaaaa 855067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 522 - 587
Target Start/End: Original strand, 26943801 - 26943866
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 587  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  26943801 tgttgccctaattccacctaatatttaacctaaaaaattatagccacttttccctccttcaaaacc 26943866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 626 - 782
Target Start/End: Original strand, 18199247 - 18199394
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||  |||| || |||||| |||||| | |||||| || ||| |||||||||    
T  18199247 taaacctaacattgttgccctaattccacctaatatttaacctaaaaaatt-atagccac-ttttccctccttc-aaaaccta-accata-tttcctaat 18199341  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    |||||| |||||  || |||||| |||||||||||||||||| ||||||||||||||    
T  18199342 tcccct-cctcc--aaaccctaa-ccatgatttcctaatttccctcctcctaaaacc 18199394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 626 - 782
Target Start/End: Complemental strand, 36094105 - 36093958
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||  |||| || |||||| |||||| | |||||| || ||| |||||||||    
T  36094105 taaacctaacattgttgccctaattccacctaatatttaacctaaaaaatt-atagccac-ttttccctccttc-aaaaccta-accata-tttcctaat 36094011  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    |||||| |||||  || |||||| |||||||||||||||||| ||||||||||||||    
T  36094010 tcccct-cctcc--aaaccctaa-ccatgatttcctaatttccctcctcctaaaacc 36093958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 524 - 610
Target Start/End: Complemental strand, 18256901 - 18256810
Alignment:
Q  524 ttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    ||||| |||||||||||||||||||| ||||||||||||||  |||||||||||||||||     ||||||||||||||||| |||||||||    
T  18256901 ttgccgtaattccacctaatatttaagctaaaaaattgtagtcacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 18256810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 522 - 587
Target Start/End: Original strand, 26943610 - 26943675
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 587  Q
    ||||||| ||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  26943610 tgttgccataattccacctaatatttaacctaaaaaattatagtcacttttccctccttcaaaacc 26943675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 750 - 823
Target Start/End: Complemental strand, 36093899 - 36093827
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccatatttttt 823  Q
    |||||||||||||||||| |||||||||||||| || ||||||||||||||| |||||| ||||||||||||||    
T  36093899 ccatgatttcctaatttccctcctcctaaaacc-tatctaattgatttccatattttctgttgccatatttttt 36093827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 626 - 782
Target Start/End: Complemental strand, 36094296 - 36094149
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||  |||| || |||||| |||||| | |||||| || ||| |||||||||    
T  36094296 taaacctaacattgttgccctaattccacctaatatttaacctaaaaaatt-atagccac-ttttccctccttc-aaaaccta-acaata-tttcctaat 36094202  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    ||||||||  ||   | |||||| |||||||||||||||||| ||| ||||||||||    
T  36094201 tcccctcctccc---aaccctaa-ccatgatttcctaatttccctcttcctaaaacc 36094149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 750 - 823
Target Start/End: Original strand, 26949149 - 26949221
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccatatttttt 823  Q
    |||||||||||||||||| ||| |||||||||| || ||||||||||||||| |||||| ||||||||||||||    
T  26949149 ccatgatttcctaatttccctcttcctaaaacc-tatctaattgatttccatattttctgttgccatatttttt 26949221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 626 - 676
Target Start/End: Original strand, 26943789 - 26943839
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaatt 676  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  26943789 taaacctaacattgttgccctaattccacctaatatttaacctaaaaaatt 26943839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 717 - 808
Target Start/End: Complemental strand, 6953346 - 6953260
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttct 808  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||||||| |||||||||||| |||| ||||||||||||||| ||||||    
T  6953346 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaatttccctcctcctaaaa-cctatctaattgatttccatattttct 6953260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 717 - 823
Target Start/End: Original strand, 18199424 - 18199525
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccat 816  Q
    ||||||||||||||||| |||| |  |||||||| |||||||| ||||||  |||||||||||| | || ||||||||||||||| |||||| |||||||    
T  18199424 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcttaattttcctcctcctaaaatc-tatctaattgatttccatattttctgttgccat 18199518  T
Q  817 atttttt 823  Q
    |||||||    
T  18199519 atttttt 18199525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 717 - 806
Target Start/End: Complemental strand, 6953485 - 6953401
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatctttt 806  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||||||| |||||||||||| |||| ||||||||||||||| ||||    
T  6953485 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaatttccctcctcctaaaa-cctatctaattgatttccatatttt 6953401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 626 - 676
Target Start/End: Original strand, 26943598 - 26943648
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaatt 676  Q
    ||||||||||||||||||| |||||||||||||||||||| |||| |||||    
T  26943598 taaacctaacattgttgccataattccacctaatatttaacctaaaaaatt 26943648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 752 - 801
Target Start/End: Original strand, 855137 - 855185
Alignment:
Q  752 atgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  855137 atgatttcctaatttccctcctcctaaaa-cctacctaattgatttccat 855185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 522 - 587
Target Start/End: Complemental strand, 52419649 - 52419585
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc 587  Q
    ||||||| |||||  ||||||||||||||||||||| | ||||| |||||||||||||||||||||    
T  52419649 tgttgccttaattatacctaatatttaacctaaaaa-tcgtagccacttttccctccttcaaaacc 52419585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 626 - 677
Target Start/End: Original strand, 851117 - 851168
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattg 677  Q
    |||||||||||  ||||||||||||||||||||||||||| |||| ||||||    
T  851117 taaacctaacaccgttgccctaattccacctaatatttaacctaaaaaattg 851168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 610
Target Start/End: Original strand, 855059 - 855125
Alignment:
Q  549 acctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    ||||||||||||||||  |||||||||||||||||     ||||||||||||||||| |||||||||    
T  855059 acctaaaaaattgtagacacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 855125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 717 - 806
Target Start/End: Complemental strand, 6953624 - 6953540
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatctttt 806  Q
    ||||||||||||||||| |||| |  |||||||| ||||||| |||||||| |||||||||||| |||| ||||||||||||||| ||||    
T  6953624 tttcctaattcccctcc-tccaaa--ccctaacc-atgattttctaatttccctcctcctaaaa-cctatctaattgatttccatatttt 6953540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 717 - 806
Target Start/End: Complemental strand, 6953867 - 6953783
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatctttt 806  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||||||| ||||||||||||  ||| ||||||||||||||| ||||    
T  6953867 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaatttccctcctcctaaaa-tctatctaattgatttccatatttt 6953783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 717 - 806
Target Start/End: Complemental strand, 36948058 - 36947974
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatctttt 806  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||||||| |||||||||||| | || ||||||||||||||| ||||    
T  36948058 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaatttccctcctcctaaaa-catatctaattgatttccatatttt 36947974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 35713175 - 35713254
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  35713175 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 35713254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 47724586 - 47724665
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  47724586 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 47724665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 750 - 806
Target Start/End: Complemental strand, 36947890 - 36947835
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatctttt 806  Q
    |||||||||||||||||| |||||||||||| | || ||||||||||||||| ||||    
T  36947890 ccatgatttcctaatttccctcctcctaaaa-catatctaattgatttccatatttt 36947835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Complemental strand, 35860556 - 35860506
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  35860556 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 35860506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Complemental strand, 36094938 - 36094888
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  36094938 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 36094888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Complemental strand, 36095153 - 36095103
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  36095153 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 36095103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Complemental strand, 49566019 - 49565969
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  49566019 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 49565969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 806
Target Start/End: Complemental strand, 6953728 - 6953644
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatctttt 806  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||||||| |||||  ||||| |||| ||||||||||||||| ||||    
T  6953728 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaatttccctcctgttaaaa-cctatctaattgatttccatatttt 6953644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 752 - 801
Target Start/End: Complemental strand, 1883365 - 1883317
Alignment:
Q  752 atgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  1883365 atgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 1883317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 610
Target Start/End: Complemental strand, 6953937 - 6953848
Alignment:
Q  524 ttgccctaattccacctaatattt-aacctaaaaaattgtagctacttttccctccttcaaaa-----ccatatttcctaatttccctcctcc 610  Q
    |||||||||||  || |||||||| |||||||||  ||||||| |||||||||||||||||||     ||||||||||||||| |||||||||    
T  6953937 ttgccctaattatacttaatattttaacctaaaa--ttgtagc-acttttccctccttcaaaatctaaccatatttcctaattcccctcctcc 6953848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 677
Target Start/End: Complemental strand, 18256901 - 18256864
Alignment:
Q  640 ttgccctaattccacctaatatttaagctaagaaattg 677  Q
    ||||| ||||||||||||||||||||||||| ||||||    
T  18256901 ttgccgtaattccacctaatatttaagctaaaaaattg 18256864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 26943970 - 26944049
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| ||  ||| |||||||| |||||||||||| ||| |||| ||||||| |||| |||||||||||||||    
T  26943970 tttcctaattcccctcc-tc--gaaaccctaacc-atgatttcctaacttcactccccctaaaa-cctatctaattgatttccat 26944049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 797
Target Start/End: Original strand, 31483635 - 31483710
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgattt 797  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||    
T  31483635 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgattt 31483710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 610
Target Start/End: Complemental strand, 49566082 - 49566029
Alignment:
Q  562 tagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc 610  Q
    |||| |||||||||||||||||||||     |||||||||||||||||||||||    
T  49566082 tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcctcc 49566029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 6e-24; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 522 - 610
Target Start/End: Original strand, 13927081 - 13927173
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc 610  Q
    ||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||     |||||||||||||||||||||||    
T  13927081 tgttgccctaatttcacctaatatttaacctaaaaaattgtagccac-tttccctccttcaaaacctaactatatttcctaatttccctcctcc 13927173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 522 - 610
Target Start/End: Original strand, 22004230 - 22004323
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    |||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  22004230 tgttgccctaattccaccgaatatttaacctaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattaccctcctcc 22004323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 522 - 610
Target Start/End: Original strand, 22004421 - 22004514
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    |||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  22004421 tgttgccctaattccacctaatatttaacccaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 22004514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 750 - 832
Target Start/End: Original strand, 13927303 - 13927384
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccatattttttaccttaaaa 832  Q
    |||||||||||||||||| ||| | |||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  13927303 ccatgatttcctaatttccctcatgctaaaacc-tacctaattgatttccatattttcttttgccatattttttacctaaaaa 13927384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 522 - 610
Target Start/End: Original strand, 7891198 - 7891291
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    |||||||||||||||| |||||||||||||||||||||| |||||| ||||| |||||||||     ||||||||||||||||| |||||||||    
T  7891198 tgttgccctaattccaactaatatttaacctaaaaaattatagctatttttctctccttcaaaacctaaccatatttcctaattcccctcctcc 7891291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 717 - 823
Target Start/End: Original strand, 7891363 - 7891464
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccat 816  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||||||| |||||||||||||| || ||||||||||||||| |||||| |||||||    
T  7891363 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaatttccctcctcctaaaacc-tatctaattgatttccatattttctgttgccat 7891457  T
Q  817 atttttt 823  Q
    |||||||    
T  7891458 atttttt 7891464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 717 - 823
Target Start/End: Original strand, 22004586 - 22004687
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccat 816  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||||||| |||||||||||||| || ||||||||||||||| |||||| |||||||    
T  22004586 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaatttccctcctcctaaaacc-tatctaattgatttccatattttctgttgccat 22004680  T
Q  817 atttttt 823  Q
    |||||||    
T  22004681 atttttt 22004687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 626 - 782
Target Start/End: Original strand, 22004409 - 22004556
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||||||||||||||||||||||||||||||| | || |||||  |||| || |||||| |||||| | |||||| || ||| |||||||||    
T  22004409 taaacctaacattgttgccctaattccacctaatatttaacccaaaaaatt-atagccac-ttttccctccttc-aaaaccta-accata-tttcctaat 22004503  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    |||||| |||||  || |||||| |||||||||||||||||| ||||||||||||||    
T  22004504 tcccct-cctcc--aaaccctaa-ccatgatttcctaatttccctcctcctaaaacc 22004556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 626 - 832
Target Start/End: Original strand, 13927069 - 13927257
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||| ||  ||||| |||||| | |||||| || ||| |||||||||    
T  13927069 taaacctaacattgttgccctaatttcacctaatatttaacctaaaaaatt-gtagccac--tttccctccttc-aaaaccta-actata-tttcctaat 13927162  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccatattttttac 825  Q
    | |||| |||||| |   ||| | |||||||||||||||||| ||||| ||||||||        | ||||||||| |||||||||||||||||||||||    
T  13927163 ttccct-cctccaaa---ccttaaccatgatttcctaatttccctcctgctaaaacc--------tagatttccatattttcttttgccatattttttac 13927250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 717 - 823
Target Start/End: Complemental strand, 3061640 - 3061539
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccat 816  Q
    ||||||||||||||||| |||| |  |||||||| ||||| |||||||||| |||||||||||||| || ||||||||||||||| |||||| |||||||    
T  3061640 tttcctaattcccctcc-tccaaa--ccctaacc-atgatctcctaatttccctcctcctaaaacc-tatctaattgatttccatattttctgttgccat 3061546  T
Q  817 atttttt 823  Q
    |||||||    
T  3061545 atttttt 3061539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 626 - 782
Target Start/End: Original strand, 7891186 - 7891333
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| |||||  |||||| ||||||  |||||| | |||||| || ||| |||||||||    
T  7891186 taaacctaacattgttgccctaattccaactaatatttaacctaaaaaatt-atagcta-tttttctctccttc-aaaaccta-accata-tttcctaat 7891280  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    |||||| |||||  || |||||| |||||||||||||||||| |||||| |||||||    
T  7891281 tcccct-cctcc--aaaccctaa-ccatgatttcctaatttccctcctcttaaaacc 7891333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 626 - 782
Target Start/End: Original strand, 22004218 - 22004365
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| |||||  |||| || |||||| |||||| | |||||| || ||| |||||||||    
T  22004218 taaacctaacattgttgccctaattccaccgaatatttaacctaaaaaatt-atagccac-ttttccctccttc-aaaaccta-accata-tttcctaat 22004312  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    | |||| |||||  || |||||| |||||||||||||||||| ||||||||||||||    
T  22004313 taccct-cctcc--aaaccctaa-ccatgatttcctaatttccctcctcctaaaacc 22004365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 13927421 - 13927500
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||||||| |||||||||||| | ||||||||||||||||||    
T  13927421 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaatttccctcctcctaaaa-cttacctaattgatttccat 13927500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 750 - 823
Target Start/End: Original strand, 29954313 - 29954385
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccatatttttt 823  Q
    ||||||| |||||||||| |||||||||||| |||| ||||||||||||||| |||||| |||| |||| ||||    
T  29954313 ccatgatctcctaatttccctcctcctaaaa-cctatctaattgatttccatattttctgttgctatatatttt 29954385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 537 - 610
Target Start/End: Complemental strand, 3600132 - 3600056
Alignment:
Q  537 acctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    ||||||||||||||||||||  ||||||| |||||||| ||||||||     ||||||||||||||||| |||||||||    
T  3600132 acctaatatttaacctaaaa--ttgtagccacttttccttccttcaaaacctaaccatatttcctaattcccctcctcc 3600056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 752 - 823
Target Start/End: Original strand, 31098022 - 31098092
Alignment:
Q  752 atgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccatatttttt 823  Q
    ||||| |||||||||| |||||||||||| |||| ||||||||||||||| |||| | | ||||||||||||    
T  31098022 atgatctcctaatttccctcctcctaaaa-cctatctaattgatttccatattttatgtagccatatttttt 31098092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 5091068 - 5091147
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  5091068 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 5091147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 717 - 801
Target Start/End: Complemental strand, 13400746 - 13400667
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  13400746 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 13400667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Original strand, 7890806 - 7890856
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  7890806 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 7890856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Original strand, 22003574 - 22003624
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  22003574 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 22003624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Original strand, 32656853 - 32656903
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  32656853 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 32656903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 782
Target Start/End: Complemental strand, 3600204 - 3600143
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||||||| ||||||||||||||    
T  3600204 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaatttccctcctcctaaaacc 3600143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Original strand, 7884973 - 7885052
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| ||  ||| |||||||| |||||||||||| ||| |||| ||||||| |||| |||||||||||||||    
T  7884973 tttcctaattcccctcc-tc--gaaaccctaacc-atgatttcctaacttcactccccctaaaa-cctatctaattgatttccat 7885052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 610
Target Start/End: Original strand, 7890743 - 7890796
Alignment:
Q  562 tagctacttttccctccttcaaaacc-----atatttcctaatttccctcctcc 610  Q
    |||| |||||||||||||||||||||     |||||||||||||||||||||||    
T  7890743 tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcctcc 7890796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 797
Target Start/End: Complemental strand, 20959442 - 20959367
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgattt 797  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||    
T  20959442 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgattt 20959367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 528 - 587
Target Start/End: Original strand, 29954217 - 29954275
Alignment:
Q  528 cctaattccacctaatattt-aacctaaaaaattgtagctacttttccctccttcaaaacc 587  Q
    |||||||  ||||||||||| |||||||||  ||||||| |||||||||||||||||||||    
T  29954217 cctaattatacctaatattttaacctaaaa--ttgtagccacttttccctccttcaaaacc 29954275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 797
Target Start/End: Original strand, 45112747 - 45112822
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgattt 797  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||    
T  45112747 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgattt 45112822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 50; Significance: 3e-19; HSPs: 3)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 522 - 610
Target Start/End: Original strand, 41147 - 41240
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctacttttccctccttcaa-----aaccatatttcctaatttccctcctcc 610  Q
    |||||||||||||||| | ||||||||||| |||||||| |||| |||||||||||||||||     ||||||||||||||||| |||||||||    
T  41147 tgttgccctaattccaacaaatatttaaccaaaaaaattatagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcc 41240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 626 - 782
Target Start/End: Original strand, 41135 - 41282
Alignment:
Q  626 taaacctaacattgttgccctaattccacctaatatttaagctaagaaattggtagctactttttccatccttcgagaacctagacgatattttcctaat 725  Q
    |||||||||||||||||||||||||||| | ||||||||| | || |||||  |||| || |||||| |||||| | |||||| || ||| |||||||||    
T  41135 taaacctaacattgttgccctaattccaacaaatatttaaccaaaaaaatt-atagccac-ttttccctccttc-aaaaccta-accata-tttcctaat 41229  T
Q  726 tcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaacc 782  Q
    |||||| |||||  || |||||| |||||||||||||||||| ||||||||||||||    
T  41230 tcccct-cctcc--aaaccctaa-ccatgatttcctaatttccctcctcctaaaacc 41282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 750 - 823
Target Start/End: Original strand, 41432 - 41504
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccatatttttt 823  Q
    ||||||||||||||||||  ||||||||||||| || ||||||||||||||| |||||| |||||||| |||||    
T  41432 ccatgatttcctaatttccatcctcctaaaacc-tatctaattgatttccatattttctgttgccataattttt 41504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 47; Significance: 2e-17; HSPs: 4)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 522 - 572
Target Start/End: Complemental strand, 29273 - 29223
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctactttt 572  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29273 tgttgccctaattccacctaatatttaacctaaaaaattgtagccactttt 29223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 522 - 572
Target Start/End: Complemental strand, 35526 - 35476
Alignment:
Q  522 tgttgccctaattccacctaatatttaacctaaaaaattgtagctactttt 572  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  35526 tgttgccctaattccacctaatatttaacctaaaaaattgtagccactttt 35476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 677
Target Start/End: Complemental strand, 29273 - 29234
Alignment:
Q  638 tgttgccctaattccacctaatatttaagctaagaaattg 677  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  29273 tgttgccctaattccacctaatatttaacctaaaaaattg 29234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 677
Target Start/End: Complemental strand, 35526 - 35487
Alignment:
Q  638 tgttgccctaattccacctaatatttaagctaagaaattg 677  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  35526 tgttgccctaattccacctaatatttaacctaaaaaattg 35487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 750 - 823
Target Start/End: Complemental strand, 18489784 - 18489712
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccatcttttcttttgccatatttttt 823  Q
    ||||||| |||||||||| |||||||||||||  || ||||||||||||||| |||||| ||||||||||||||    
T  18489784 ccatgatctcctaatttccctcctcctaaaacg-tatctaattgatttccatattttctgttgccatatttttt 18489712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 750 - 801
Target Start/End: Complemental strand, 22732233 - 22732183
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||||||| |||||||||||| |||| |||||||||||||||    
T  22732233 ccatgatttcctaatttcactcctcctaaaa-cctatctaattgatttccat 22732183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 717 - 801
Target Start/End: Complemental strand, 41377864 - 41377785
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  41377864 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 41377785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Original strand, 18489994 - 18490044
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  18489994 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 18490044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Original strand, 21637125 - 21637175
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  21637125 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 21637175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 801
Target Start/End: Complemental strand, 24011235 - 24011185
Alignment:
Q  750 ccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  24011235 ccatgatttcctaacttcactcctcctaaaa-cctatctaattgatttccat 24011185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 797
Target Start/End: Complemental strand, 37985498 - 37985423
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgattt 797  Q
    ||||||||||||||||| |||| |  |||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||    
T  37985498 tttcctaattcccctcc-tccaaa--ccctaacc-atgatttcctaacttcactcctcctaaaa-cctatctaattgattt 37985423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 801
Target Start/End: Complemental strand, 44686 - 44607
Alignment:
Q  717 tttcctaattcccctccctccagaacccctaacccatgatttcctaatttctctcctcctaaaaccctacctaattgatttccat 801  Q
    ||||||||||||||||| ||  ||| |||||||| |||||||||||| ||| |||| ||||||| |||| |||||||||||||||    
T  44686 tttcctaattcccctcc-tc--gaaaccctaacc-atgatttcctaacttcactccccctaaaa-cctatctaattgatttccat 44607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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