View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1271-7-Insertion-3 (Length: 569)

Name: NF1271-7-Insertion-3
Description: NF1271-7
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1271-7-Insertion-3
NF1271-7-Insertion-3
[»] chr3 (14 HSPs)
chr3 (70-317)||(43596353-43596600)
chr3 (502-569)||(32319474-32319541)
chr3 (502-566)||(50934495-50934559)
chr3 (502-569)||(10018675-10018742)
chr3 (502-569)||(10179872-10179939)
chr3 (509-569)||(39498778-39498838)
chr3 (502-569)||(10123215-10123282)
chr3 (502-569)||(44380249-44380316)
chr3 (507-566)||(47186175-47186234)
chr3 (502-569)||(47426345-47426412)
chr3 (511-569)||(33509684-33509742)
chr3 (519-569)||(37742737-37742787)
chr3 (507-566)||(31187182-31187241)
chr3 (507-566)||(42664673-42664732)
[»] chr2 (7 HSPs)
chr2 (373-489)||(41784572-41784696)
chr2 (502-569)||(34392190-34392257)
chr2 (502-565)||(7381687-7381750)
chr2 (502-561)||(21603954-21604013)
chr2 (502-569)||(37358030-37358097)
chr2 (507-555)||(4775634-4775682)
chr2 (507-566)||(37811091-37811150)
[»] chr8 (6 HSPs)
chr8 (502-569)||(41179672-41179739)
chr8 (502-565)||(24337943-24338006)
chr8 (503-547)||(11254158-11254202)
chr8 (514-569)||(18168392-18168447)
chr8 (514-569)||(18631949-18632004)
chr8 (507-547)||(1514803-1514843)
[»] chr7 (4 HSPs)
chr7 (502-569)||(35341531-35341598)
chr7 (502-569)||(48250149-48250216)
chr7 (511-569)||(31306982-31307041)
chr7 (503-533)||(48072385-48072415)
[»] chr4 (12 HSPs)
chr4 (502-569)||(34829192-34829259)
chr4 (502-569)||(21260789-21260856)
chr4 (502-569)||(12473699-12473766)
chr4 (502-569)||(12528108-12528175)
chr4 (502-569)||(55590477-55590544)
chr4 (508-569)||(52910158-52910219)
chr4 (505-569)||(35869680-35869744)
chr4 (502-569)||(51811909-51811976)
chr4 (507-566)||(52012778-52012837)
chr4 (504-562)||(22343334-22343392)
chr4 (502-569)||(33249483-33249550)
chr4 (511-566)||(49998486-49998541)
[»] scaffold0032 (1 HSPs)
scaffold0032 (502-566)||(34189-34253)
[»] chr1 (7 HSPs)
chr1 (502-569)||(29119433-29119500)
chr1 (507-569)||(2569037-2569099)
chr1 (502-555)||(32676131-32676184)
chr1 (502-569)||(8462124-8462190)
chr1 (507-566)||(8809752-8809811)
chr1 (502-569)||(25161304-25161371)
chr1 (502-560)||(46435571-46435629)
[»] chr5 (12 HSPs)
chr5 (504-569)||(19357370-19357435)
chr5 (502-569)||(11607643-11607710)
chr5 (507-566)||(38010726-38010785)
chr5 (512-569)||(33858647-33858704)
chr5 (502-566)||(13015376-13015440)
chr5 (502-569)||(1826254-1826321)
chr5 (502-569)||(9827783-9827850)
chr5 (507-566)||(13086753-13086812)
chr5 (523-562)||(33271630-33271669)
chr5 (502-569)||(39570152-39570219)
chr5 (507-566)||(13478157-13478216)
chr5 (507-566)||(29989962-29990021)
[»] scaffold0229 (1 HSPs)
scaffold0229 (502-568)||(13116-13182)
[»] chr6 (5 HSPs)
chr6 (502-568)||(1211954-1212020)
chr6 (507-569)||(11753167-11753229)
chr6 (502-569)||(5403985-5404052)
chr6 (502-569)||(32644945-32645012)
chr6 (507-566)||(34245567-34245626)
[»] scaffold0519 (1 HSPs)
scaffold0519 (503-547)||(11191-11235)
[»] scaffold0263 (1 HSPs)
scaffold0263 (537-569)||(23208-23240)


Alignment Details
Target: chr3 (Bit Score: 240; Significance: 1e-132; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 70 - 317
Target Start/End: Complemental strand, 43596600 - 43596353
Alignment:
Q  70 cggctccgtcgtattctcactggaagcgtctcgatgacgagtcacgaaacgttagggtttctgtttggtgggatttcgagaactgcagcgtgccggtcgg 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43596600 cggctccgtcgtattctcactggaagcgtctcgatgacgagtcacgaaacgttagggtttctgtgtggtgggatttcgagaactgcagcgtgccggtcgg 43596501  T
Q  170 ccttaacgtttccagagtagccccgtcaatcactgacgccattagagcgaacgggattaaaggtcctgttcatattactgctttcggtgatgtgatgcag 269  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43596500 ccttaacgtttccagagtagccccgtcaatcactgacgccgttagagcgaacgggattaaaggtcctgttcatattactgctttcggtgatgtgatgcag 43596401  T
Q  270 ctttctaaatctaatcaagaatcacttgctttcactggcattcatctc 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43596400 ctttctaaatctaatcaagaatcacttgctttcactggcattcatctc 43596353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 502 - 569
Target Start/End: Complemental strand, 32319541 - 32319474
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    |||||| |||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  32319541 ggattctacttgtgtaccattaaggtaccaatggtatataccattggccaattagagtgtgccaccta 32319474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 502 - 566
Target Start/End: Original strand, 50934495 - 50934559
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccac 566  Q
    ||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||    
T  50934495 ggatttcacttgtgtaccattaaggtaccaatggtatataccattggccaattagagtgtgccac 50934559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 502 - 569
Target Start/End: Complemental strand, 10018742 - 10018675
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||||||||||||||| ||||| ||||||||| |||||| |||||| |||| |||||||||||||||    
T  10018742 ggattccacttgtgtaccattaaagtaccaatgttatataccattggtcaataaaagtgtgccaccta 10018675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 502 - 569
Target Start/End: Complemental strand, 10179939 - 10179872
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||||||||||||||| ||||| ||||||||| |||||| |||||| |||||| |||||||||||||    
T  10179939 ggattccacttgtgtaccattaaagtaccaatggtatataccattggtcaattagagtgtgccaccta 10179872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 509 - 569
Target Start/End: Complemental strand, 39498838 - 39498778
Alignment:
Q  509 acttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    |||||||||| ||||| ||||||||||||||||| ||||| ||||||||||||| ||||||    
T  39498838 acttgtgtaccattaaagtaccaatgatatatattattggtcaattaaagtgtgtcaccta 39498778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 502 - 569
Target Start/End: Complemental strand, 10123282 - 10123215
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||||||||||||||| ||||| ||| ||||| ||||||||| ||| |||| |||||||||||||||    
T  10123282 ggattccacttgtgtaccattaaagtatcaatgttatatatcaatggtcaataaaagtgtgccaccta 10123215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 502 - 569
Target Start/End: Original strand, 44380249 - 44380316
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||||||||||||||| ||||||||||||||| ||||||  |||| ||||||| |||||| ||||||    
T  44380249 ggattccacttgtgtaccattaaggtaccaatggtatatactattgaccaattatagtgtgtcaccta 44380316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 507 - 566
Target Start/End: Original strand, 47186175 - 47186234
Alignment:
Q  507 ccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccac 566  Q
    |||||||||||| ||||||||||||||| |||||| ||||||||||| | ||||||||||    
T  47186175 ccacttgtgtaccattaaggtaccaatgttatataacattggccaataagagtgtgccac 47186234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 502 - 569
Target Start/End: Original strand, 47426345 - 47426412
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    |||| |||||||||||| ||||||||||||||  |||||| ||||||||||||| |||||| ||||||    
T  47426345 ggataccacttgtgtaccattaaggtaccaatagtatataccattggccaattagagtgtgtcaccta 47426412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 511 - 569
Target Start/End: Original strand, 33509684 - 33509742
Alignment:
Q  511 ttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    |||||||| |||||||||| |||  |||||||||||| ||||||| |||||||||||||    
T  33509684 ttgtgtaccattaaggtactaatagtatatatcattgaccaattagagtgtgccaccta 33509742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 37742737 - 37742787
Alignment:
Q  519 tattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    |||||||||||||||| ||||||||||||| |||||| ||| |||||||||    
T  37742737 tattaaggtaccaatggtatatatcattggtcaattagagtatgccaccta 37742787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 566
Target Start/End: Complemental strand, 31187241 - 31187182
Alignment:
Q  507 ccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccac 566  Q
    |||||| ||||| ||||||||||||||| |||||| ||||| ||||| | ||||||||||    
T  31187241 ccacttatgtaccattaaggtaccaatgttatataacattgaccaataagagtgtgccac 31187182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 566
Target Start/End: Original strand, 42664673 - 42664732
Alignment:
Q  507 ccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccac 566  Q
    |||||||||||| ||||||||||||| | |||||| ||||| ||||| | ||||||||||    
T  42664673 ccacttgtgtaccattaaggtaccaaagttatataacattgaccaataagagtgtgccac 42664732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 2e-41; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 373 - 489
Target Start/End: Original strand, 41784572 - 41784696
Alignment:
Q  373 aatgtctagttttccacttttaatattcaaatctttttatgattttttgtctctaaaattccactctg-------tttctaggatttcttcctgtttgtc 465  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  41784572 aatgtctagttttccacttttaatattcaaatctttttatgattttttgtctctaaaattccactctgtttctactttctaggatttcttcctgtttgtc 41784671  T
Q  466 -tttaaggatattaacatgattttt 489  Q
     ||||||||||||| ||||||||||    
T  41784672 ttttaaggatattagcatgattttt 41784696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 502 - 569
Target Start/End: Complemental strand, 34392257 - 34392190
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||||||||||||||| ||| ||||||||||| |||||| ||||||||||||| |||||||||||||    
T  34392257 ggattccacttgtgtaccattgaggtaccaatggtatataccattggccaattagagtgtgccaccta 34392190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 502 - 565
Target Start/End: Original strand, 7381687 - 7381750
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgcca 565  Q
    ||||||| ||||||||| ||||||||||||||| ||||||  |||||||||||| |||||||||    
T  7381687 ggattccgcttgtgtaccattaaggtaccaatggtatatactattggccaattagagtgtgcca 7381750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 502 - 561
Target Start/End: Original strand, 21603954 - 21604013
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgt 561  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||| ||||||| |||||    
T  21603954 ggattccacttgtgtaccattaaggtaccaatggtatataccattgaccaattatagtgt 21604013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 502 - 569
Target Start/End: Complemental strand, 37358097 - 37358030
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||| | ||||| |||||| ||||||    
T  37358097 ggattccacttgtgtatcattaaggtaccaatgatatataccattgactaattagagtgtgtcaccta 37358030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 507 - 555
Target Start/End: Original strand, 4775634 - 4775682
Alignment:
Q  507 ccacttgtgtactattaaggtaccaatgatatatatcattggccaatta 555  Q
    |||||| ||||| |||||| |||||||||||||||| ||||||||||||    
T  4775634 ccacttatgtaccattaagctaccaatgatatatattattggccaatta 4775682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 566
Target Start/End: Original strand, 37811091 - 37811150
Alignment:
Q  507 ccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccac 566  Q
    |||||||||||| |||  | |||||||| |||||| ||||||||||| ||||||||||||    
T  37811091 ccacttgtgtaccattgggataccaatgttatataacattggccaatgaaagtgtgccac 37811150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 3e-25; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 502 - 569
Target Start/End: Complemental strand, 41179739 - 41179672
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41179739 ggattccacttgtgtaccattaaggtaccaatgatatatatcattggccaattaaagtgtgtcaccta 41179672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 502 - 565
Target Start/End: Complemental strand, 24338006 - 24337943
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgcca 565  Q
    |||| |||||||||||||||||||||| ||||| |||||| ||| || |||||| |||||||||    
T  24338006 ggataccacttgtgtactattaaggtagcaatggtatataccatcggtcaattagagtgtgcca 24337943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 503 - 547
Target Start/End: Complemental strand, 11254202 - 11254158
Alignment:
Q  503 gattccacttgtgtactattaaggtaccaatgatatatatcattg 547  Q
    |||||||||||||||| |||||  |||||||||||||||||||||    
T  11254202 gattccacttgtgtaccattaaattaccaatgatatatatcattg 11254158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 569
Target Start/End: Original strand, 18168392 - 18168447
Alignment:
Q  514 tgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||| ||||||||||||||| ||||||||||||  |||||| ||||| |||||||    
T  18168392 tgtaccattaaggtaccaatggtatatatcattgatcaattagagtgtcccaccta 18168447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 569
Target Start/End: Original strand, 18631949 - 18632004
Alignment:
Q  514 tgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||| ||||||||||||||| ||||||||||||  |||||| ||||| |||||||    
T  18631949 tgtaccattaaggtaccaatggtatatatcattgatcaattagagtgtcccaccta 18632004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 547
Target Start/End: Original strand, 1514803 - 1514843
Alignment:
Q  507 ccacttgtgtactattaaggtaccaatgatatatatcattg 547  Q
    |||||||||||| ||||||||||||||| |||||| |||||    
T  1514803 ccacttgtgtaccattaaggtaccaatgttatataacattg 1514843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 502 - 569
Target Start/End: Original strand, 35341531 - 35341598
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| |||||||||||||    
T  35341531 ggattccacttgtgtaccattaaggtaccaatgatatataccattgaccaattatagtgtgccaccta 35341598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 502 - 569
Target Start/End: Original strand, 48250149 - 48250216
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  48250149 ggataccacttgtgtaccattaaggtaccaatgatatatatcattggtcaattagagtgtgccaccta 48250216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 511 - 569
Target Start/End: Complemental strand, 31307041 - 31306982
Alignment:
Q  511 ttgtgtactattaaggtaccaatgatatatatcattggccaa-ttaaagtgtgccaccta 569  Q
    |||||||| ||||| ||| |||||||||||||||||| |||| ||||||||||| |||||    
T  31307041 ttgtgtaccattaaagtatcaatgatatatatcattgtccaatttaaagtgtgctaccta 31306982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 533
Target Start/End: Original strand, 48072385 - 48072415
Alignment:
Q  503 gattccacttgtgtactattaaggtaccaat 533  Q
    |||||||||||||||||||||||||||||||    
T  48072385 gattccacttgtgtactattaaggtaccaat 48072415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 1e-20; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 502 - 569
Target Start/End: Complemental strand, 34829259 - 34829192
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  34829259 ggatttcacttatgtactattaaggtaccaatgatatatatcaatggccaattaaagtgtgtcaccta 34829192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 502 - 569
Target Start/End: Original strand, 21260789 - 21260856
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||||||||| | ||| |||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  21260789 ggattccacttatataccattaaggtaccaatgatatatatcattggccaattagagtgtgtcaccta 21260856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 502 - 569
Target Start/End: Original strand, 12473699 - 12473766
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    |||| |||||||| ||| ||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  12473699 ggataccacttgtataccattaaggtaccaatggtatataccattggccaattagagtgtgccaccta 12473766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 502 - 569
Target Start/End: Original strand, 12528108 - 12528175
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    |||| |||||||| ||| ||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  12528108 ggataccacttgtataccattaaggtaccaatggtatataccattggccaattagagtgtgccaccta 12528175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 502 - 569
Target Start/End: Original strand, 55590477 - 55590544
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||  |||||| |||||| ||||||    
T  55590477 ggattccacttgtgtaccattaaggtaccaatggtatatatcattgatcaattatagtgtgtcaccta 55590544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 508 - 569
Target Start/End: Complemental strand, 52910219 - 52910158
Alignment:
Q  508 cacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||||||||| || | |||||||||| |||||| |||||||||||||||||||||||||||    
T  52910219 cacttgtgtaccataatggtaccaatgttatataccattggccaattaaagtgtgccaccta 52910158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 505 - 569
Target Start/End: Complemental strand, 35869744 - 35869680
Alignment:
Q  505 ttccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    |||||||||||||| ||||||||||||||| |||||| ||||| ||||||| | |||||||||||    
T  35869744 ttccacttgtgtaccattaaggtaccaatggtatataccattgaccaattataatgtgccaccta 35869680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 502 - 569
Target Start/End: Original strand, 51811909 - 51811976
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    |||||||||| |||||| ||||||||| ||| ||||||||| |||||||||||| ||| |||||||||    
T  51811909 ggattccactcgtgtaccattaaggtatcaaagatatatattattggccaattagagtatgccaccta 51811976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 507 - 566
Target Start/End: Original strand, 52012778 - 52012837
Alignment:
Q  507 ccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccac 566  Q
    |||||||||||| ||||||||||||||| |||||| ||||| ||||| ||||||||||||    
T  52012778 ccacttgtgtaccattaaggtaccaatgttatataacattgaccaataaaagtgtgccac 52012837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 504 - 562
Target Start/End: Original strand, 22343334 - 22343392
Alignment:
Q  504 attccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtg 562  Q
    ||||||||||||||| ||||||||| ||||| |||||||||||| ||||||| ||||||    
T  22343334 attccacttgtgtaccattaaggtatcaatggtatatatcattgaccaattagagtgtg 22343392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 502 - 569
Target Start/End: Complemental strand, 33249550 - 33249483
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||| ||||||||||| |||||||||| |||| ||||||  |||||||||||| |||||| ||||||    
T  33249550 ggatttcacttgtgtaccattaaggtacaaatggtatatacaattggccaattagagtgtgtcaccta 33249483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 511 - 566
Target Start/End: Original strand, 49998486 - 49998541
Alignment:
Q  511 ttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccac 566  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||  |||||||||    
T  49998486 ttgtgtaccattaaggtaccaatattatatatcattggccaattagggtgtgccac 49998541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 502 - 566
Target Start/End: Original strand, 34189 - 34253
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccac 566  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  34189 ggattccacttgtgtaccattaaggtaccaatggtatatattattggccaattagagtgtgccac 34253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 4e-18; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 502 - 569
Target Start/End: Complemental strand, 29119500 - 29119433
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    |||| |||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  29119500 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattagagtgtgccaccta 29119433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 507 - 569
Target Start/End: Original strand, 2569037 - 2569099
Alignment:
Q  507 ccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    |||||||||||| ||||||||||||||| ||||||||||| |||||||| |||||||||||||    
T  2569037 ccacttgtgtaccattaaggtaccaatggtatatatcatttgccaattagagtgtgccaccta 2569099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 502 - 555
Target Start/End: Original strand, 32676131 - 32676184
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaatta 555  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||||||||||    
T  32676131 ggattccacttgtgtaccattaaggtaccaatggtatataccattggccaatta 32676184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 502 - 569
Target Start/End: Original strand, 8462124 - 8462190
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||||  |||||| |||||||||||||    
T  8462124 ggattccacttgtgta-tattaaagtaccaatggtatatatcattgatcaattatagtgtgccaccta 8462190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 507 - 566
Target Start/End: Complemental strand, 8809811 - 8809752
Alignment:
Q  507 ccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccac 566  Q
    |||||||||||| ||||||||||||||| |||||| ||||| ||||| | ||||||||||    
T  8809811 ccacttgtgtaccattaaggtaccaatgttatataacattgaccaataagagtgtgccac 8809752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 502 - 569
Target Start/End: Original strand, 25161304 - 25161371
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||||||||||||||| ||||| ||  ||||| |||||| ||||| ||||||| |||||||||||||    
T  25161304 ggattccacttgtgtaccattaaagtctcaatggtatataccattgaccaattacagtgtgccaccta 25161371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 560
Target Start/End: Complemental strand, 46435629 - 46435571
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtg 560  Q
    |||| |||||||||||| ||||||||||||||| ||||||  |||||||||||| ||||    
T  46435629 ggataccacttgtgtaccattaaggtaccaatggtatatacaattggccaattagagtg 46435571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 6e-17; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 569
Target Start/End: Complemental strand, 19357435 - 19357370
Alignment:
Q  504 attccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||||||||||||| |||| |||||||||| |||||| ||||||||||||| |||||||||||||    
T  19357435 attccacttgtgtaccattagggtaccaatggtatataccattggccaattagagtgtgccaccta 19357370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 502 - 569
Target Start/End: Complemental strand, 11607710 - 11607643
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||||||||||| ||| ||||||||||||||| |||||| ||||| ||||||| |||||||||||||    
T  11607710 ggattccacttgtataccattaaggtaccaatggtatataccattgaccaattatagtgtgccaccta 11607643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 507 - 566
Target Start/End: Complemental strand, 38010785 - 38010726
Alignment:
Q  507 ccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccac 566  Q
    |||||||||||| ||||||||||||||| |||||| ||||||||||| | ||||||||||    
T  38010785 ccacttgtgtaccattaaggtaccaatgttatataacattggccaataagagtgtgccac 38010726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 512 - 569
Target Start/End: Complemental strand, 33858704 - 33858647
Alignment:
Q  512 tgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||||| ||||||||||||||  |||||||||||| ||||||| |||||||||||||    
T  33858704 tgtgtaccattaaggtaccaatagtatatatcattgaccaattatagtgtgccaccta 33858647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 502 - 566
Target Start/End: Original strand, 13015376 - 13015440
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccac 566  Q
    |||| |||||||||||| ||||||||||||||| |||||| ||||| ||||| | ||||||||||    
T  13015376 ggataccacttgtgtaccattaaggtaccaatgttatataacattgaccaataagagtgtgccac 13015440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 502 - 569
Target Start/End: Original strand, 1826254 - 1826321
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    |||| |||||||||||| ||||| ||||||||| |||||| |||||| |||||| |||||| ||||||    
T  1826254 ggataccacttgtgtaccattaaagtaccaatggtatataccattggtcaattagagtgtgtcaccta 1826321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 502 - 569
Target Start/End: Original strand, 9827783 - 9827850
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||||||||||||||| ||||||||||||||| |||||| | || | |||||| ||||| |||||||    
T  9827783 ggattccacttgtgtaccattaaggtaccaatggtatatacctttagtcaattagagtgtaccaccta 9827850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 507 - 566
Target Start/End: Original strand, 13086753 - 13086812
Alignment:
Q  507 ccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccac 566  Q
    |||||||||||| ||||||||||||||| |||||| ||||| ||||| | ||||||||||    
T  13086753 ccacttgtgtaccattaaggtaccaatgttatataacattgaccaataagagtgtgccac 13086812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 523 - 562
Target Start/End: Original strand, 33271630 - 33271669
Alignment:
Q  523 aaggtaccaatgatatatatcattggccaattaaagtgtg 562  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  33271630 aaggtaccaatgatatatatcattggccaattagagtgtg 33271669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 502 - 569
Target Start/End: Complemental strand, 39570219 - 39570152
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||||||||||||||  ||||| ||| ||||| |||||| ||||||||||||| |||||| ||||||    
T  39570219 ggattccacttgtgtatcattaaagtatcaatggtatataccattggccaattagagtgtgtcaccta 39570152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 566
Target Start/End: Complemental strand, 13478216 - 13478157
Alignment:
Q  507 ccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccac 566  Q
    |||||||||||| ||||||| ||||||| |||||| ||||| ||||| | ||||||||||    
T  13478216 ccacttgtgtaccattaaggaaccaatgttatataacattgaccaataagagtgtgccac 13478157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 566
Target Start/End: Original strand, 29989962 - 29990021
Alignment:
Q  507 ccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccac 566  Q
    |||||||||||| ||||||||| ||||| |||||| ||||| ||||| | ||||||||||    
T  29989962 ccacttgtgtaccattaaggtatcaatgttatataacattgaccaataagagtgtgccac 29990021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 502 - 568
Target Start/End: Complemental strand, 13182 - 13116
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccacct 568  Q
    ||||| ||||||||||| ||||||||||||||| |||||| ||||||| |||||  |||||||||||    
T  13182 ggatttcacttgtgtaccattaaggtaccaatggtatataccattggctaattagtgtgtgccacct 13116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 502 - 568
Target Start/End: Complemental strand, 1212020 - 1211954
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccacct 568  Q
    ||||| ||||||||||| ||||||||||||||| |||||| ||||||| |||||  |||||||||||    
T  1212020 ggatttcacttgtgtaccattaaggtaccaatggtatataccattggctaattagtgtgtgccacct 1211954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 507 - 569
Target Start/End: Original strand, 11753167 - 11753229
Alignment:
Q  507 ccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    |||||||||||| ||||||||||||||| |||||| ||| ||||||||| ||||| |||||||    
T  11753167 ccacttgtgtaccattaaggtaccaatggtatataccatcggccaattagagtgtcccaccta 11753229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 502 - 569
Target Start/End: Complemental strand, 5404052 - 5403985
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    |||| |||||||||||| |||||||||| |||| ||||||| ||||| || ||| ||| |||||||||    
T  5404052 ggataccacttgtgtaccattaaggtactaatggtatatattattggtcagttagagtctgccaccta 5403985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 502 - 569
Target Start/End: Complemental strand, 32645012 - 32644945
Alignment:
Q  502 ggattccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccaccta 569  Q
    ||||||||| ||||||| |||||| || | ||  ||||||||||||||||||||| ||||| ||||||    
T  32645012 ggattccacctgtgtaccattaagatatcgatagtatatatcattggccaattaaggtgtgtcaccta 32644945  T

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Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 566
Target Start/End: Original strand, 34245567 - 34245626
Alignment:
Q  507 ccacttgtgtactattaaggtaccaatgatatatatcattggccaattaaagtgtgccac 566  Q
    |||||||||||| |||||||||  |||| |||||| ||||| ||||| ||||||||||||    
T  34245567 ccacttgtgtaccattaaggtattaatgttatataacattgaccaataaaagtgtgccac 34245626  T

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Target: scaffold0519 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 503 - 547
Target Start/End: Original strand, 11191 - 11235
Alignment:
Q  503 gattccacttgtgtactattaaggtaccaatgatatatatcattg 547  Q
    |||||||||||||||| |||||  |||||||||||||||||||||    
T  11191 gattccacttgtgtaccattaaattaccaatgatatatatcattg 11235  T

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Target: scaffold0263 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 537 - 569
Target Start/End: Complemental strand, 23240 - 23208
Alignment:
Q  537 atatatcattggccaattaaagtgtgccaccta 569  Q
    ||||||||||||||||||| |||||||||||||    
T  23240 atatatcattggccaattagagtgtgccaccta 23208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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