View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12710_low_22 (Length: 224)
Name: NF12710_low_22
Description: NF12710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12710_low_22 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 28 - 205
Target Start/End: Complemental strand, 24017253 - 24017076
Alignment:
| Q |
28 |
tgaaacaatactgctcatacgtgaagacaatgaattcaatatacgtttgcttatacatgtcactaacttgtcatgcatggttttatttgataaatataaa |
127 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
24017253 |
tgaaacaatactgctcatacgtgaagacaatgaattcaatatacgtttgcttatacatgtcactaacttgtcaagcatggttttatttgataaatataaa |
24017154 |
T |
|
| Q |
128 |
attaaaacgaattcattcaatccagtaaacaaagatcacacaatctaatagtattaaatgtattcggtaattctaata |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
24017153 |
attaaaacgaattcattcaatccagtaaacaaagatcacacaatctaatagtattaagtgtattcggtaattctaata |
24017076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University