View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12714_high_9 (Length: 250)
Name: NF12714_high_9
Description: NF12714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12714_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 17 - 232
Target Start/End: Complemental strand, 37089882 - 37089667
Alignment:
| Q |
17 |
taggtcactgaattcggtcgttataagcttcattcattctctgtgaagcgctaacacatacacggacatgataccaaaatatcggggctcacaatattga |
116 |
Q |
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| T |
37089882 |
taggtcactgaattcggtcgttataagcttcattcattctctgtgaagcgctaacacatacacggacatgataccaaaatatcggggctcacaatattga |
37089783 |
T |
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| Q |
117 |
aaactagacatgcattcaatatgaagtatcggtgttgaatagtttgtttctctttcaaggcttaactcgagccaattttcctctgtactagtcaagatta |
216 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
37089782 |
aaactagacatgcattcaatatgaagtatcggtgctgaatagtttgtttctctttcaaggcttaactcgagccaattttcctttgtactagtcaagatta |
37089683 |
T |
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| Q |
217 |
ctatagatgataaatt |
232 |
Q |
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|||||||||||||||| |
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| T |
37089682 |
ctatagatgataaatt |
37089667 |
T |
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