View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12714_low_9 (Length: 281)
Name: NF12714_low_9
Description: NF12714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12714_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 9 - 263
Target Start/End: Original strand, 30689396 - 30689650
Alignment:
| Q |
9 |
agtgagatgaagcaaggcttttaacaaactactttaaaattataatggaaatcaccaactcatgcctccgtcgcaaaacataaatatctctgatgacggc |
108 |
Q |
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| T |
30689396 |
agtgaaatgaagcaaggcttttaacaaactactttaaaattataatggaaatcaccaactcatgcctccgtcgcaaaacataaatatctctgatgacggc |
30689495 |
T |
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| Q |
109 |
acatataaagcatagaagttaaccttgattagctcctcctgcatttcaagatattccaactttctcttcctctccgaaacagaatcttcagaaggcaaag |
208 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30689496 |
acatataaagcataaaagttaaccttgattagctcctcctgcatttcaagatattccaactttctcttcctctccgaaacagaatcttcagaaggcaaag |
30689595 |
T |
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| Q |
209 |
ctgtcaccccaacagtatccacaacctcatctggcaaagaagagagtgtagcttg |
263 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30689596 |
ctgtcaccccaacagtatccacaacctcatctggcaaagaagagagtgtagcttg |
30689650 |
T |
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