View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12715_high_8 (Length: 605)
Name: NF12715_high_8
Description: NF12715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12715_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 530; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 530; E-Value: 0
Query Start/End: Original strand, 1 - 591
Target Start/End: Complemental strand, 32079645 - 32079059
Alignment:
| Q |
1 |
ctttaacaggtcttgtttgttttgtctggttttttccccattttctacgatcctgcttcaattgttgatatttctggatatgtgtggagttaggagtggt |
100 |
Q |
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| T |
32079645 |
ctttaacaggtcttgtttgttttgtctggttttttccccattttctacgatcctgcttcaattgttgatatttctggatatgtgtggagttaggagtggt |
32079546 |
T |
|
| Q |
101 |
tgatatttcgcaaatgcttcactcattaataacactttattttagaaaggaaggatgcgtaaatattattgccttacaccaaatcttacatcacagagtc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32079545 |
tgatatttcgcaaatgcttcactcattaataacactttattttagaagggaaggatgcgtaaatattattgccttacaccaaatcttacatcacagagtc |
32079446 |
T |
|
| Q |
201 |
ttactaagttactatcattagggaatcaagtaatcaaagtctatctaatatctcagtatcaatatcacagaattgtgaaaatggatatgaataattgaag |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
32079445 |
ttactaagttactatcattagggaatcaagtaatcaaagtctatctaatatctcagtatcaatatcacagaattgtgaaaatggatatgaagaattgaag |
32079346 |
T |
|
| Q |
301 |
accctaggcaaaatcaaagtgtttctatggaggtgttgtnnnnnnnnnnnngataaaaacttactaagaagaatgcttatattgttcaaaaaagaagaag |
400 |
Q |
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||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32079345 |
accctaggcaaaatcaaagtgtttctatgaaggtgttgt----tatatatagataaaaacttactaagaagaatgcttatattgttcaaaaaagaagaag |
32079250 |
T |
|
| Q |
401 |
aatgcttataaggtatgatctcagtctctaccccatccgtcaaaaacatgaatcaatatggagcgtatgtcttttgatttttaaggattggcatgccttt |
500 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |
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| T |
32079249 |
aatgcttataaggtatgatctcagtctctaccccatccgtcaaaaacatgaatcaatatggagcatatgtcttttgatgtttaaggattggcatgccttt |
32079150 |
T |
|
| Q |
501 |
ggagattcaagactacatatttggttacatgaaaagttaatgttattgaattaattaagagttactttggattggtgaatttgggcctatg |
591 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32079149 |
ggagattcaagactacatatttggttacatgaaaagttaatgttattgaattaattaagagttactttggattggtgaatttgggcctatg |
32079059 |
T |
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