View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12715_low_43 (Length: 215)
Name: NF12715_low_43
Description: NF12715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12715_low_43 |
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Alignment Details
Target: chr4 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 25 - 203
Target Start/End: Original strand, 45409070 - 45409247
Alignment:
| Q |
25 |
tgttctactctattgtgtatttagcatatgataccttccttaaggtttatgctagcttaaccatttcaaatgctactaatccaatccgtgattaaggtcc |
124 |
Q |
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| T |
45409070 |
tgttctactctattgtgtatttagcatatgataccttccttaaggtttatgctagcttaaccatttcaaatgctaccaatccaatccgtgattaa-gtcc |
45409168 |
T |
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| Q |
125 |
cataaacactgtcggtggtagataatagagtgattagccttacacgtgcttaatagtttagacagagcttccctttgct |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45409169 |
cataaacactgtcggtggtagataatagagtgattagccttacacgtgcttaatagtttagacagagcttccctttgct |
45409247 |
T |
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