View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12716_high_10 (Length: 348)

Name: NF12716_high_10
Description: NF12716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12716_high_10
NF12716_high_10
[»] chr1 (71 HSPs)
chr1 (19-323)||(3924474-3924778)
chr1 (68-280)||(10199368-10199579)
chr1 (66-194)||(33527192-33527320)
chr1 (114-255)||(15437908-15438049)
chr1 (97-242)||(35017502-35017649)
chr1 (110-267)||(4699587-4699741)
chr1 (122-256)||(25479534-25479668)
chr1 (116-258)||(37842336-37842478)
chr1 (120-249)||(29007706-29007835)
chr1 (171-263)||(31118045-31118137)
chr1 (134-250)||(45205033-45205149)
chr1 (154-221)||(49888752-49888819)
chr1 (116-254)||(6932946-6933084)
chr1 (208-266)||(29635386-29635444)
chr1 (110-251)||(10854674-10854815)
chr1 (124-229)||(34179882-34179987)
chr1 (202-258)||(4549263-4549319)
chr1 (202-266)||(4576838-4576902)
chr1 (99-250)||(4700055-4700206)
chr1 (116-223)||(7472259-7472365)
chr1 (183-258)||(35925704-35925779)
chr1 (116-258)||(38578474-38578617)
chr1 (135-229)||(6279365-6279459)
chr1 (120-178)||(15360845-15360903)
chr1 (119-242)||(28689449-28689574)
chr1 (119-241)||(14629964-14630088)
chr1 (156-229)||(23902077-23902150)
chr1 (117-258)||(31517721-31517862)
chr1 (119-256)||(43029385-43029521)
chr1 (173-249)||(3223672-3223747)
chr1 (116-200)||(6074421-6074505)
chr1 (134-242)||(12477284-12477392)
chr1 (149-229)||(12564884-12564964)
chr1 (120-256)||(17269201-17269337)
chr1 (178-230)||(33722410-33722462)
chr1 (116-248)||(36151496-36151628)
chr1 (202-254)||(37416838-37416890)
chr1 (136-223)||(4215339-4215426)
chr1 (134-229)||(5592695-5592790)
chr1 (176-239)||(28077069-28077132)
chr1 (116-255)||(33185942-33186080)
chr1 (66-140)||(172676-172750)
chr1 (126-220)||(4363651-4363745)
chr1 (134-256)||(6262704-6262825)
chr1 (183-229)||(11893603-11893649)
chr1 (122-192)||(25006081-25006151)
chr1 (176-242)||(27140485-27140551)
chr1 (116-229)||(30259496-30259610)
chr1 (66-108)||(35058903-35058945)
chr1 (81-181)||(42757223-42757324)
chr1 (149-215)||(44422679-44422745)
chr1 (120-190)||(49517021-49517091)
chr1 (107-280)||(3224361-3224533)
chr1 (183-256)||(14128458-14128530)
chr1 (116-261)||(33723360-33723505)
chr1 (161-242)||(34290228-34290309)
chr1 (66-143)||(34619474-34619551)
chr1 (168-229)||(39347977-39348038)
chr1 (180-229)||(43954055-43954104)
chr1 (173-234)||(44251540-44251601)
chr1 (149-258)||(45394095-45394204)
chr1 (176-229)||(51929785-51929838)
chr1 (198-242)||(4201935-4201979)
chr1 (157-229)||(6659502-6659574)
chr1 (120-228)||(11129196-11129304)
chr1 (119-224)||(15361661-15361768)
chr1 (154-226)||(35590905-35590977)
chr1 (208-280)||(37941945-37942016)
chr1 (210-266)||(42336656-42336712)
chr1 (173-229)||(47598431-47598487)
chr1 (120-230)||(49557092-49557208)
[»] chr3 (53 HSPs)
chr3 (116-256)||(40122736-40122875)
chr3 (110-242)||(24785146-24785278)
chr3 (110-251)||(36101509-36101650)
chr3 (116-229)||(38462228-38462341)
chr3 (116-223)||(24887299-24887406)
chr3 (105-215)||(47904087-47904197)
chr3 (137-266)||(19679301-19679430)
chr3 (110-251)||(36139819-36139960)
chr3 (116-229)||(36646392-36646505)
chr3 (122-227)||(2318596-2318703)
chr3 (119-242)||(45432936-45433059)
chr3 (176-229)||(12985355-12985408)
chr3 (137-266)||(14548694-14548823)
chr3 (134-254)||(1816548-1816668)
chr3 (116-232)||(27792819-27792935)
chr3 (115-191)||(36783382-36783458)
chr3 (154-229)||(22214669-22214744)
chr3 (116-171)||(49586984-49587039)
chr3 (130-256)||(21574452-21574577)
chr3 (116-229)||(21862185-21862299)
chr3 (119-169)||(34954033-34954083)
chr3 (154-258)||(21367652-21367757)
chr3 (134-215)||(23315591-23315672)
chr3 (120-256)||(27290884-27291018)
chr3 (126-191)||(37788817-37788882)
chr3 (116-189)||(43116478-43116551)
chr3 (116-261)||(52618950-52619095)
chr3 (222-258)||(5457073-5457109)
chr3 (181-249)||(36200108-36200176)
chr3 (202-258)||(47249467-47249523)
chr3 (96-143)||(139912-139959)
chr3 (150-213)||(30322046-30322109)
chr3 (100-159)||(34958259-34958318)
chr3 (184-255)||(42745053-42745124)
chr3 (150-224)||(20502083-20502157)
chr3 (175-229)||(31403153-31403207)
chr3 (160-266)||(34382933-34383039)
chr3 (208-266)||(41724251-41724309)
chr3 (120-249)||(3044249-3044378)
chr3 (176-229)||(13709833-13709886)
chr3 (120-229)||(23785206-23785315)
chr3 (135-255)||(25453842-25453963)
chr3 (178-231)||(26478954-26479007)
chr3 (172-249)||(26542540-26542617)
chr3 (173-266)||(32711429-32711522)
chr3 (116-189)||(42084301-42084374)
chr3 (162-255)||(43115049-43115142)
chr3 (81-142)||(44014192-44014253)
chr3 (182-266)||(23808037-23808121)
chr3 (162-258)||(30573895-30573991)
chr3 (116-192)||(30956673-30956749)
chr3 (116-192)||(30972485-30972561)
chr3 (176-256)||(37273141-37273221)
[»] chr7 (54 HSPs)
chr7 (66-256)||(12110257-12110447)
chr7 (116-221)||(3610758-3610863)
chr7 (116-256)||(33894570-33894714)
chr7 (72-205)||(44917570-44917703)
chr7 (154-266)||(25670559-25670671)
chr7 (110-212)||(46945850-46945952)
chr7 (85-258)||(30535479-30535652)
chr7 (66-143)||(41668206-41668283)
chr7 (66-143)||(41668884-41668961)
chr7 (119-190)||(2727409-2727480)
chr7 (116-266)||(5006484-5006632)
chr7 (176-255)||(9423578-9423657)
chr7 (127-267)||(44151448-44151592)
chr7 (66-139)||(6824816-6824888)
chr7 (134-249)||(12234879-12234992)
chr7 (173-229)||(24363611-24363667)
chr7 (122-234)||(28165044-28165156)
chr7 (118-189)||(9527140-9527211)
chr7 (126-213)||(17989049-17989136)
chr7 (116-223)||(27481310-27481417)
chr7 (120-235)||(38010665-38010780)
chr7 (119-220)||(2999141-2999243)
chr7 (116-194)||(39169460-39169538)
chr7 (116-226)||(44910551-44910661)
chr7 (162-235)||(2825235-2825308)
chr7 (116-213)||(22759133-22759230)
chr7 (116-181)||(45813238-45813303)
chr7 (217-261)||(1645678-1645722)
chr7 (178-242)||(26935554-26935618)
chr7 (183-223)||(40428569-40428609)
chr7 (116-256)||(46081980-46082123)
chr7 (119-215)||(46086397-46086493)
chr7 (119-186)||(30496654-30496721)
chr7 (168-235)||(40530413-40530480)
chr7 (126-181)||(45777229-45777284)
chr7 (176-242)||(4966163-4966229)
chr7 (116-221)||(28440466-28440571)
chr7 (129-223)||(29363478-29363572)
chr7 (116-166)||(35536054-35536104)
chr7 (66-224)||(45530418-45530576)
chr7 (176-249)||(7244687-7244760)
chr7 (165-252)||(20888381-20888465)
chr7 (132-213)||(36370633-36370713)
chr7 (120-221)||(44241811-44241911)
chr7 (162-255)||(46104551-46104644)
chr7 (133-229)||(3468578-3468674)
chr7 (168-256)||(20553102-20553190)
chr7 (120-224)||(28128410-28128513)
chr7 (117-213)||(30456476-30456572)
chr7 (218-266)||(33294555-33294603)
chr7 (176-256)||(33645944-33646023)
chr7 (110-229)||(36484045-36484165)
chr7 (218-266)||(36537957-36538005)
chr7 (173-221)||(39505960-39506008)
[»] chr2 (82 HSPs)
chr2 (70-255)||(41817069-41817254)
chr2 (117-205)||(41407023-41407111)
chr2 (116-280)||(787278-787442)
chr2 (110-266)||(39621894-39622048)
chr2 (149-258)||(40158698-40158807)
chr2 (134-266)||(35485882-35486014)
chr2 (118-266)||(26857083-26857231)
chr2 (110-193)||(4090290-4090373)
chr2 (116-229)||(43259781-43259894)
chr2 (120-208)||(10143123-10143211)
chr2 (118-214)||(34054926-34055022)
chr2 (140-235)||(42419968-42420063)
chr2 (134-229)||(43141836-43141931)
chr2 (116-230)||(656786-656900)
chr2 (132-229)||(7103492-7103590)
chr2 (116-194)||(17952746-17952824)
chr2 (117-247)||(33942099-33942228)
chr2 (66-212)||(35486390-35486536)
chr2 (117-190)||(43299451-43299525)
chr2 (197-258)||(28677640-28677701)
chr2 (116-225)||(32694159-32694268)
chr2 (123-256)||(33256694-33256827)
chr2 (145-213)||(4085226-4085293)
chr2 (116-256)||(28933771-28933910)
chr2 (116-255)||(5133719-5133858)
chr2 (173-256)||(16785331-16785414)
chr2 (120-235)||(22681189-22681304)
chr2 (116-187)||(23143030-23143101)
chr2 (116-187)||(23554820-23554891)
chr2 (120-255)||(42817360-42817495)
chr2 (201-268)||(45314900-45314967)
chr2 (122-224)||(6988068-6988170)
chr2 (120-226)||(13630294-13630400)
chr2 (116-242)||(29316772-29316898)
chr2 (100-258)||(43530092-43530250)
chr2 (154-255)||(680488-680589)
chr2 (119-256)||(1742015-1742152)
chr2 (172-221)||(1810667-1810716)
chr2 (66-255)||(28039316-28039505)
chr2 (176-249)||(32821816-32821889)
chr2 (129-206)||(37292380-37292457)
chr2 (182-258)||(1647249-1647325)
chr2 (176-240)||(10198479-10198543)
chr2 (115-179)||(31740019-31740083)
chr2 (114-166)||(33192138-33192190)
chr2 (149-223)||(3059290-3059365)
chr2 (74-195)||(6887306-6887426)
chr2 (121-256)||(10285813-10285947)
chr2 (119-194)||(13866839-13866914)
chr2 (116-183)||(25609743-25609810)
chr2 (122-232)||(27288586-27288694)
chr2 (120-171)||(40808268-40808319)
chr2 (173-256)||(43065433-43065516)
chr2 (120-191)||(44439408-44439479)
chr2 (134-192)||(5043607-5043665)
chr2 (183-256)||(11488291-11488362)
chr2 (197-235)||(41032959-41032997)
chr2 (179-249)||(41809235-41809305)
chr2 (110-207)||(626243-626340)
chr2 (179-224)||(1741529-1741574)
chr2 (182-223)||(3973548-3973589)
chr2 (157-258)||(35378513-35378614)
chr2 (119-192)||(37053544-37053617)
chr2 (116-181)||(42907306-42907371)
chr2 (156-221)||(43985021-43985086)
chr2 (178-243)||(44443330-44443395)
chr2 (176-256)||(3067362-3067442)
chr2 (117-229)||(3235394-3235504)
chr2 (116-172)||(14209224-14209280)
chr2 (117-213)||(18962064-18962160)
chr2 (118-214)||(29300594-29300690)
chr2 (154-234)||(29628748-29628828)
chr2 (197-249)||(31228827-31228879)
chr2 (116-160)||(32098387-32098431)
chr2 (111-191)||(33931618-33931698)
chr2 (154-258)||(33941894-33941998)
chr2 (135-194)||(34101983-34102043)
chr2 (176-256)||(35378999-35379079)
chr2 (116-152)||(38239638-38239674)
chr2 (202-238)||(43569773-43569809)
chr2 (116-252)||(44438826-44438962)
chr2 (202-258)||(44606091-44606147)
[»] chr5 (48 HSPs)
chr5 (116-263)||(17368623-17368770)
chr5 (114-266)||(37588333-37588485)
chr5 (134-249)||(10272421-10272536)
chr5 (117-256)||(14295454-14295593)
chr5 (116-255)||(16889682-16889821)
chr5 (114-266)||(37526172-37526324)
chr5 (162-240)||(2880546-2880624)
chr5 (114-256)||(37794681-37794822)
chr5 (119-228)||(28586777-28586886)
chr5 (66-264)||(10125693-10125892)
chr5 (116-258)||(7674595-7674737)
chr5 (116-254)||(12459986-12460123)
chr5 (81-258)||(9106737-9106911)
chr5 (120-249)||(18704026-18704154)
chr5 (114-266)||(37690609-37690762)
chr5 (157-256)||(10907367-10907465)
chr5 (127-258)||(15003495-15003626)
chr5 (173-258)||(2468435-2468521)
chr5 (162-255)||(10391334-10391428)
chr5 (197-258)||(499712-499773)
chr5 (117-242)||(4855646-4855771)
chr5 (176-267)||(11707062-11707153)
chr5 (120-171)||(29116998-29117049)
chr5 (175-266)||(37611188-37611279)
chr5 (175-266)||(37787918-37788009)
chr5 (156-258)||(2568645-2568747)
chr5 (94-189)||(14599353-14599450)
chr5 (168-258)||(17827523-17827613)
chr5 (116-221)||(29588827-29588931)
chr5 (119-256)||(32172603-32172740)
chr5 (116-213)||(36539693-36539790)
chr5 (110-171)||(42569048-42569109)
chr5 (122-230)||(12595749-12595857)
chr5 (183-231)||(38104865-38104913)
chr5 (110-192)||(912695-912778)
chr5 (176-255)||(36638754-36638833)
chr5 (116-215)||(38831481-38831579)
chr5 (156-214)||(5946704-5946762)
chr5 (178-228)||(32408603-32408653)
chr5 (176-229)||(3237100-3237153)
chr5 (114-226)||(18543210-18543322)
chr5 (197-242)||(28413281-28413326)
chr5 (164-229)||(30217077-30217142)
chr5 (117-214)||(36542307-36542404)
chr5 (182-242)||(12521541-12521601)
chr5 (116-160)||(28578839-28578883)
chr5 (120-176)||(35135725-35135781)
chr5 (176-220)||(36774726-36774770)
[»] chr4 (55 HSPs)
chr4 (116-260)||(20936208-20936352)
chr4 (120-229)||(49219090-49219199)
chr4 (66-250)||(6466035-6466219)
chr4 (134-266)||(7693984-7694115)
chr4 (119-235)||(24929443-24929559)
chr4 (168-242)||(6978959-6979033)
chr4 (110-258)||(1137653-1137801)
chr4 (116-235)||(17884015-17884134)
chr4 (116-266)||(24370924-24371077)
chr4 (123-241)||(30207569-30207686)
chr4 (119-261)||(54325015-54325157)
chr4 (134-267)||(35064820-35064950)
chr4 (83-191)||(53422276-53422380)
chr4 (120-242)||(29263321-29263443)
chr4 (119-266)||(4071832-4071975)
chr4 (110-266)||(2996514-2996670)
chr4 (134-214)||(6987766-6987846)
chr4 (122-258)||(22666707-22666843)
chr4 (134-214)||(30581702-30581782)
chr4 (119-223)||(45128326-45128430)
chr4 (161-256)||(1965933-1966028)
chr4 (203-254)||(8469362-8469413)
chr4 (116-171)||(21952522-21952577)
chr4 (116-266)||(50742809-50742957)
chr4 (176-242)||(55547041-55547107)
chr4 (156-229)||(8468935-8469008)
chr4 (155-260)||(30631943-30632047)
chr4 (149-258)||(42866048-42866157)
chr4 (110-205)||(3891518-3891611)
chr4 (149-223)||(18019951-18020026)
chr4 (120-251)||(23819041-23819171)
chr4 (119-229)||(30338601-30338712)
chr4 (183-242)||(35743296-35743355)
chr4 (116-159)||(52645829-52645872)
chr4 (116-215)||(52735069-52735168)
chr4 (202-256)||(3176087-3176141)
chr4 (132-190)||(13949893-13949951)
chr4 (149-215)||(21157748-21157814)
chr4 (188-242)||(29467621-29467675)
chr4 (196-266)||(37575909-37575979)
chr4 (120-258)||(47118946-47119084)
chr4 (116-186)||(50745947-50746017)
chr4 (202-267)||(4691881-4691946)
chr4 (197-266)||(27123325-27123394)
chr4 (110-155)||(38478683-38478728)
chr4 (110-235)||(42321884-42322008)
chr4 (176-257)||(46110210-46110291)
chr4 (151-256)||(53943588-53943693)
chr4 (121-190)||(55870390-55870459)
chr4 (185-229)||(5131260-5131304)
chr4 (176-256)||(18011878-18011958)
chr4 (207-267)||(19395043-19395103)
chr4 (119-175)||(20936066-20936122)
chr4 (111-215)||(45104431-45104535)
chr4 (116-160)||(47970265-47970309)
[»] chr6 (49 HSPs)
chr6 (116-242)||(281845-281971)
chr6 (106-266)||(33887767-33887927)
chr6 (118-249)||(2117352-2117483)
chr6 (68-252)||(33080565-33080753)
chr6 (183-266)||(30523951-30524034)
chr6 (120-252)||(4006665-4006797)
chr6 (168-256)||(20377903-20377991)
chr6 (117-258)||(31776254-31776396)
chr6 (116-266)||(2735016-2735167)
chr6 (156-251)||(34403842-34403937)
chr6 (175-256)||(7931709-7931790)
chr6 (116-189)||(31624205-31624278)
chr6 (175-256)||(32665665-32665746)
chr6 (116-197)||(33826777-33826858)
chr6 (116-192)||(1402943-1403019)
chr6 (157-249)||(2112188-2112280)
chr6 (134-249)||(4420610-4420723)
chr6 (155-255)||(7945868-7945967)
chr6 (116-255)||(2027390-2027529)
chr6 (116-223)||(9093572-9093679)
chr6 (203-258)||(33832254-33832309)
chr6 (183-266)||(34939527-34939610)
chr6 (174-228)||(7931800-7931854)
chr6 (94-235)||(17241256-17241395)
chr6 (120-224)||(24836217-24836318)
chr6 (176-266)||(31686336-31686426)
chr6 (110-191)||(415245-415326)
chr6 (177-254)||(27909623-27909700)
chr6 (116-256)||(33500463-33500604)
chr6 (208-267)||(2455298-2455358)
chr6 (140-200)||(10272865-10272925)
chr6 (116-228)||(20671877-20671988)
chr6 (182-266)||(32577959-32578043)
chr6 (116-247)||(3155123-3155253)
chr6 (134-249)||(3181059-3181173)
chr6 (116-223)||(27893994-27894100)
chr6 (183-242)||(34939758-34939817)
chr6 (196-242)||(6536974-6537020)
chr6 (116-166)||(24782006-24782056)
chr6 (180-266)||(30604907-30604993)
chr6 (202-256)||(33498652-33498706)
chr6 (197-266)||(2460124-2460193)
chr6 (134-191)||(3785748-3785805)
chr6 (197-242)||(7785741-7785786)
chr6 (118-159)||(34633206-34633247)
chr6 (149-221)||(725673-725745)
chr6 (116-180)||(10452419-10452483)
chr6 (196-256)||(30863273-30863333)
chr6 (203-267)||(33089540-33089604)
[»] chr8 (73 HSPs)
chr8 (116-222)||(29973028-29973134)
chr8 (78-189)||(926396-926508)
chr8 (66-211)||(34522082-34522229)
chr8 (118-215)||(27728045-27728142)
chr8 (116-229)||(28769349-28769462)
chr8 (126-258)||(38537548-38537680)
chr8 (119-258)||(42215287-42215426)
chr8 (176-266)||(8060676-8060766)
chr8 (176-229)||(30277255-30277308)
chr8 (116-256)||(4558745-4558885)
chr8 (116-256)||(11183492-11183632)
chr8 (140-252)||(24258042-24258149)
chr8 (136-256)||(30191124-30191244)
chr8 (179-258)||(3254235-3254314)
chr8 (175-266)||(12851182-12851273)
chr8 (119-266)||(37822632-37822778)
chr8 (136-258)||(10383852-10383974)
chr8 (178-256)||(14949875-14949953)
chr8 (114-208)||(34770837-34770931)
chr8 (178-258)||(11188136-11188216)
chr8 (154-258)||(43504736-43504840)
chr8 (189-256)||(6950342-6950409)
chr8 (149-255)||(4390193-4390299)
chr8 (165-267)||(8255388-8255490)
chr8 (151-233)||(11745658-11745740)
chr8 (84-258)||(13459561-13459734)
chr8 (176-242)||(20672757-20672823)
chr8 (116-194)||(34080311-34080389)
chr8 (176-221)||(29169115-29169160)
chr8 (116-229)||(39866744-39866860)
chr8 (116-228)||(1470867-1470979)
chr8 (121-181)||(3269646-3269706)
chr8 (161-229)||(8062321-8062389)
chr8 (157-229)||(31705073-31705145)
chr8 (122-234)||(33714241-33714352)
chr8 (183-258)||(2458547-2458622)
chr8 (156-235)||(2492923-2493002)
chr8 (116-167)||(26215443-26215494)
chr8 (116-163)||(27465320-27465367)
chr8 (168-267)||(27754403-27754502)
chr8 (116-191)||(33209268-33209343)
chr8 (116-223)||(39561557-39561664)
chr8 (128-255)||(41620275-41620402)
chr8 (149-249)||(43704366-43704468)
chr8 (208-254)||(7424688-7424734)
chr8 (120-194)||(8799356-8799430)
chr8 (121-219)||(10437837-10437934)
chr8 (116-230)||(13652162-13652276)
chr8 (116-230)||(13710805-13710919)
chr8 (85-258)||(34849020-34849193)
chr8 (189-251)||(41606891-41606953)
chr8 (156-214)||(44865589-44865647)
chr8 (116-222)||(3537046-3537154)
chr8 (124-249)||(7714197-7714322)
chr8 (217-266)||(8629504-8629553)
chr8 (137-258)||(11813086-11813207)
chr8 (81-142)||(16163375-16163436)
chr8 (197-242)||(25869263-25869308)
chr8 (116-221)||(30013166-30013270)
chr8 (202-267)||(30259147-30259212)
chr8 (197-266)||(30918141-30918209)
chr8 (162-231)||(37776712-37776781)
chr8 (121-234)||(41336650-41336763)
chr8 (138-235)||(42215086-42215182)
chr8 (183-256)||(43368683-43368756)
chr8 (120-208)||(4763869-4763957)
chr8 (118-166)||(10079136-10079184)
chr8 (206-258)||(27119910-27119962)
chr8 (176-240)||(30389106-30389170)
chr8 (116-212)||(30627929-30628025)
chr8 (203-258)||(32840966-32841022)
chr8 (183-223)||(42370377-42370417)
chr8 (116-188)||(42597348-42597420)
[»] scaffold0020 (1 HSPs)
scaffold0020 (119-258)||(159954-160092)
[»] scaffold0024 (1 HSPs)
scaffold0024 (120-230)||(27527-27637)
[»] scaffold0053 (1 HSPs)
scaffold0053 (119-187)||(20129-20197)
[»] scaffold0022 (1 HSPs)
scaffold0022 (117-192)||(143109-143183)
[»] scaffold0311 (1 HSPs)
scaffold0311 (200-266)||(10590-10656)
[»] scaffold0136 (1 HSPs)
scaffold0136 (178-240)||(32756-32818)
[»] scaffold0110 (1 HSPs)
scaffold0110 (119-255)||(4207-4344)
[»] scaffold0003 (1 HSPs)
scaffold0003 (173-229)||(306330-306386)


Alignment Details
Target: chr1 (Bit Score: 293; Significance: 1e-164; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 19 - 323
Target Start/End: Original strand, 3924474 - 3924778
Alignment:
Q  19 cagagagactttaagatggcaaggaatacatgtaacaccagtgctgggtttggataaacagtttattttgcaacatatagcataaacactaatgaaaaag 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3924474 cagagagactttaagatggcaaggaatacatgtaacaccagtgctgggtttggataaacagtttattttgcaacatatagcataaacactaatgaaaaag 3924573  T
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccga 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3924574 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctgaagagtttatggaaataagccga 3924673  T
Q  219 aaacaacttataaacatttcataaattgttttcataagttttctcaaatcagtgttacaagtatcaatgtcacgagataaattcaaataagttaatcgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  3924674 aaacaacttataaacatttcataaattgttttcataagttttctcaaatcagtgttacaagtatctatgtcacgagataaattcaaataagtcaatcgag 3924773  T
Q  319 acata 323  Q
    |||||    
T  3924774 acata 3924778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 68 - 280
Target Start/End: Complemental strand, 10199579 - 10199368
Alignment:
Q  68 ttggataaacagtttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataat 167  Q
    |||| ||||||  |||||||||| | ||||||||||||||| ||  | ||| |||||||||||| ||||||||||| ||| |||||| ||||||||||||    
T  10199579 ttgggtaaacaacttattttgcagcttatagcataaacacttatagataagttatttctataacccaagataaaataaagtcaaactattttcgtataat 10199480  T
Q  168 ctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaat 267  Q
    | || || | |||| |||||||||  || |||| ||||| |||||||| ||||||||||||| ||||| ||||||  | ||||||| |||| || |||||    
T  10199479 cgataagcttttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaacatgtcataagctattttcatgagttctcccaaat 10199380  T
Q  268 cagtgttacaagt 280  Q
     ||||| ||||||    
T  10199379 -agtgtcacaagt 10199368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 33527320 - 33527192
Alignment:
Q  66 gtttggataaacagtttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtata 165  Q
    |||||||||||||| |||||||||| | || ||||||| | || ||||| |||||||||||| |||| ||||||||||  || |||||||||||| ||||    
T  33527320 gtttggataaacagcttattttgcagcttagagcataagcgcttatgaataagctatttctaaaacaaaagataaaatacagtcaaactgttttcatata 33527221  T
Q  166 atctattagttgtttttataagctatcct 194  Q
    |||||| || |||||| ||||| ||||||    
T  33527220 atctataagctgttttcataagttatcct 33527192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 255
Target Start/End: Original strand, 15437908 - 15438049
Alignment:
Q  114 aaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataa 213  Q
    ||||||||||||||||||| || ||||||| ||| ||||||||||||  || | | |  ||||||||| ||| ||||||||  |||||||| ||||||||    
T  15437908 aaaagctatttctataacaaaaaataaaattaagtcaaactgttttcaaatcagccagaagttgttttcataggctatcctcgagagtttacggaaataa 15438007  T
Q  214 gccgaaaacaacttataaacatttcataaattgttttcataa 255  Q
    || ||||  ||||||| ||||| |||||| |||||| |||||    
T  15438008 gctgaaagtaacttatgaacatgtcataagttgtttccataa 15438049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 97 - 242
Target Start/End: Original strand, 35017502 - 35017649
Alignment:
Q  97 agcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaac--tgttttcgtataatctattagttgtttttataagctatcct 194  Q
    |||||||  ||| ||||| ||||||||| ||||| |||||||||||| ||| |||||  ||||||||||||||||||  | |||||| ||||||| ||||    
T  35017502 agcataagaacttatgaataagctatttttataatacaagataaaataaagtcaaacactgttttcgtataatctatatgctgttttcataagctgtcct 35017601  T
Q  195 aaagagtttatggaaataagccgaaaacaacttataaacatttcataa 242  Q
      |||| |||||||||||||  ||||| |||||||  |||| ||||||    
T  35017602 ggagagcttatggaaataagttgaaaataacttatggacatgtcataa 35017649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 267
Target Start/End: Complemental strand, 4699741 - 4699587
Alignment:
Q  110 atgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaa 209  Q
    ||||| |||||||||||| |||||||||| |||| ||| |||||| |||| |||||||| |   ||| |||| |||| ||||||   |||| |||| |||    
T  4699741 atgaataagctatttctacaacacaagattaaataaagtcaaactatttttgtataatcca---gttattttcataaactatcccggagagcttatagaa 4699645  T
Q  210 ataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaat 267  Q
    ||||||  |||||| ||||| ||||| |||||| |||||||||||||| || ||||||    
T  4699644 ataagctaaaaacagcttatgaacatgtcataagttgttttcataagtattatcaaat 4699587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 25479534 - 25479668
Alignment:
Q  122 tttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaa 221  Q
    ||||||||||  |||||||||| | | |||| ||| ||| ||||  |||| ||||||||| ||||||||||||| |||| ||||| |||||||| |||||    
T  25479534 tttctataaccaaagataaaataacgtcaaattgtcttcatataggctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaa 25479633  T
Q  222 caacttataaacatttcataaattgttttcataag 256  Q
    ||||| || ||||| ||||||  | ||||||||||    
T  25479634 caactaatgaacatgtcataatctattttcataag 25479668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 258
Target Start/End: Complemental strand, 37842478 - 37842336
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||||||| || ||||| |||| |||  ||||||| |||| |||| |||| ||||||||| |||||||||| | ||||  ||||  ||||||||    
T  37842478 aagctatttctatagcaaaagatgaaataaagttaaactgtgttcgaataagctataagttgttttcataagctatcttgaagaacttataaaaataagc 37842379  T
Q  216 cgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
     ||||||  ||||| ||||| |||| |  ||||||||||||||    
T  37842378 tgaaaactgcttatgaacatgtcattagatgttttcataagtt 37842336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 120 - 249
Target Start/End: Complemental strand, 29007835 - 29007706
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    ||||||||||||| |||| ||| | ||| |||||| ||||| ||||| |||| ||||||||| ||  ||||   | || || |||| ||||||||| |||    
T  29007835 tatttctataacaaaagaaaaattaaagtcaaactattttcatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaa 29007736  T
Q  220 aacaacttataaacatttcataaattgttt 249  Q
    |||||||||| ||||| |||||||||||||    
T  29007735 aacaacttatgaacatatcataaattgttt 29007706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 31118045 - 31118137
Alignment:
Q  171 ttagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctc 263  Q
    ||||||||||| |||||||| ||| | ||  |||||||||||||| |||||||||| || ||||| ||||||  |||||||||||||| ||||    
T  31118045 ttagttgttttcataagctaccctgatgaacttatggaaataagctgaaaacaactgatgaacatgtcataagatgttttcataagttgtctc 31118137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 250
Target Start/End: Original strand, 45205033 - 45205149
Alignment:
Q  134 aagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaac 233  Q
    |||||||||| ||| |||||| ||| | ||||| |||  ||||||||| |||||||||| |  |||||| |||||||||||| ||||||||||||   ||    
T  45205033 aagataaaataaagtcaaactatttccatataagctagaagttgttttcataagctatcatgtagagttcatggaaataagctgaaaacaacttagggac 45205132  T
Q  234 atttcataaattgtttt 250  Q
    || |||||| |||||||    
T  45205133 atatcataagttgtttt 45205149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 49888752 - 49888819
Alignment:
Q  154 tgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaa 221  Q
    ||||||||||||| |||||||||||||| |||||||||| || |||  ||||| ||||||||||||||    
T  49888752 tgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 49888819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 6933084 - 6932946
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||| |||| ||||||| || ||||||| ||| |||| ||||||| || ||  |||||||| |||| ||||| | |||| ||||| |||||||||||| |    
T  6933084 aagccatttttataacaaaacataaaataaagtcaaattgttttcatagaagttattagttcttttcataagttgtcctgaagagcttatggaaataaac 6932985  T
Q  216 cgaaaacaacttataaacatttcataaattgttttcata 254  Q
     ||||  ||||||| ||||| ||||||| ||||| ||||    
T  6932984 tgaaactaacttatgaacatatcataaactgtttccata 6932946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 29635386 - 29635444
Alignment:
Q  208 aaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||| || |||||||    
T  29635386 aaataagctgaaaacaacttataaacatgtcataacttgttttcataaattctctcaaa 29635444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 251
Target Start/End: Original strand, 10854674 - 10854815
Alignment:
Q  110 atgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaa 209  Q
    ||||| ||| |||||||  || |||||||||||| ||| ||||||| ||| |||||||||||  |||||||| |||  ||||||| || || ||| | ||    
T  10854674 atgaataagttatttctgaaatacaagataaaataaagtcaaactgattttgtataatctatatgttgttttcatatactatcctgaacagcttaagaaa 10854773  T
Q  210 ataagccgaaaacaacttataaacatttcataaattgttttc 251  Q
    |||||| ||||||| ||| | ||||| ||||||  |||||||    
T  10854774 ataagctgaaaacagcttgtgaacatgtcataagctgttttc 10854815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 34179987 - 34179882
Alignment:
Q  124 tctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaaca 223  Q
    ||||||||| |||||||||| ||| |||| ||||||  | ||| |||| |  |||||| |||| ||||||| || |||||||||||||| || |||||||    
T  34179987 tctataacaaaagataaaataaagtcaaattgttttaatctaagctataaactgttttcataaactatcctgaaaagtttatggaaatacgctgaaaaca 34179888  T
Q  224 acttat 229  Q
    ||||||    
T  34179887 acttat 34179882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 4549263 - 4549319
Alignment:
Q  202 ttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||||| || |||||    
T  4549263 ttatggaaataagctgaaaacaacttatagacatgtcataaattgtttccaaaagtt 4549319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 4576838 - 4576902
Alignment:
Q  202 ttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    ||||| |||||||| ||| ||||||||||||||| ||||||| | |||||||||||| |||||||    
T  4576838 ttatgaaaataagctgaacacaacttataaacatgtcataaactattttcataagttgtctcaaa 4576902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 250
Target Start/End: Complemental strand, 4700206 - 4700055
Alignment:
Q  99 cataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaag 198  Q
    ||||| |||| ||| | ||||||||||||||||| |||||||||| |||  |     ||| ||||||| |||| |  ||||||||||| |||||||  ||    
T  4700206 cataagcacttatgtacaagctatttctataacaaaagataaaataaagttacttcatttccgtataagctataaactgtttttataaactatcctggag 4700107  T
Q  199 agtttatggaaataagccgaaaacaacttataaacatttcataaattgtttt 250  Q
    || ||||| |||||||| ||||||||||  ||||||| ||| ||||| ||||    
T  4700106 agcttatgaaaataagctgaaaacaactcctaaacatgtcaaaaattatttt 4700055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 7472259 - 7472365
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||||||||||| |||||| ||| |||  ||| |||||| ||||||||||| || |||||  |||||||||| |  |||| ||||| ||||||||    
T  7472259 aagctatttctataacaaaagatataat-aagttaaattgtttttgtataatctataagctgtttccataagctatcttggagagcttatgaaaataagc 7472357  T
Q  216 cgaaaaca 223  Q
     |||||||    
T  7472358 tgaaaaca 7472365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 35925704 - 35925779
Alignment:
Q  183 ataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
    |||||||||| |  ||||||||||||||||||  ||||||| ||||| ||||| ||||||  ||||||||||||||    
T  35925704 ataagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagtt 35925779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 258
Target Start/End: Original strand, 38578474 - 38578617
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatg-gaaataag 214  Q
    ||||||||||||||||| ||||||| || |||  ||| | |||| |||||| |||| ||||||||  |||| ||||    |||||||||||  |||||||    
T  38578474 aagctatttctataacaaaagataacataaagttaaattatttttgtataagctataagttgtttacataaactattgagaagagtttatgaaaaataag 38578573  T
Q  215 ccgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
    |  |||||||||||| || || | |||| |||||||||||||||    
T  38578574 ctcaaaacaacttatgaatatgttataagttgttttcataagtt 38578617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 229
Target Start/End: Original strand, 6279365 - 6279459
Alignment:
Q  135 agataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    ||||||||| ||  |||| ||||||||||||| || | |  | |||| ||||||||||||| |||| ||||||||||| || |||||||||||||    
T  6279365 agataaaataaaaacaaattgttttcgtataagctttaaactattttcataagctatcctagagagcttatggaaatacgctgaaaacaacttat 6279459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 178
Target Start/End: Original strand, 15360845 - 15360903
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgt 178  Q
    ||||||||||||| |||||||||| ||| |||||||||||| ||||| |||| ||||||    
T  15360845 tatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagttgt 15360903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 242
Target Start/End: Complemental strand, 28689574 - 28689449
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttt--tataagctatcctaaagagtttatggaaataagcc 216  Q
    ||||||||||| || |||||||||| || ||||   |||||| ||||| |||| |||||||||  ||||||||||| |  | || ||||| ||||||||     
T  28689574 ctatttctatatcaaaagataaaataaatgcaagtggttttcatataagctataagttgttttcatataagctatcttggaaagcttatgaaaataagct 28689475  T
Q  217 gaaaacaacttataaacatttcataa 242  Q
    |||||||||||||  |||| ||||||    
T  28689474 gaaaacaacttatggacatgtcataa 28689449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 241
Target Start/End: Complemental strand, 14630088 - 14629964
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtata--atctattagttgtttttataagctatcctaaagagtttatggaaataagcc 216  Q
    |||| ||||||||| |||||||||| |||  | ||||||| | ||||  | |||| || | |||| |||||||||| |  ||| |||||||||||||||     
T  14630088 ctatctctataacaaaagataaaataaagttacactgtttacatatataagctataagctattttcataagctatcttggagactttatggaaataagct 14629989  T
Q  217 gaaaacaacttataaacatttcata 241  Q
    ||||||||||||| ||||| |||||    
T  14629988 gaaaacaacttatgaacatatcata 14629964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 229
Target Start/End: Complemental strand, 23902150 - 23902077
Alignment:
Q  156 ttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    ||||| ||||| |||| ||||||||| | |||||||| || |||| |||||||| ||||| |||||||||||||    
T  23902150 ttttcatataagctataagttgttttcaaaagctatcttagagagcttatggaagtaagctgaaaacaacttat 23902077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 258
Target Start/End: Complemental strand, 31517862 - 31517721
Alignment:
Q  117 agctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagcc 216  Q
    ||||||||||| |||| |||||||||| |||  ||| || |||| ||||| |||| || ||| || |||| || || |  |||| ||||| ||||||||     
T  31517862 agctatttctacaacaaaagataaaataaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagct 31517763  T
Q  217 gaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
    ||||||| ||||| ||||| |||| | ||||||| |||||||    
T  31517762 gaaaacagcttatgaacatgtcatgagttgttttgataagtt 31517721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 43029521 - 43029385
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccga 218  Q
    ||||||||| |||| |||||||||| ||  |||||||||| | |||||  ||| || | |||| ||||||||| ||  | || |||||||||||||| ||    
T  43029521 ctatttctacaacaaaagataaaataaattcaaactgtttcc-tataagttatgaggtattttcataagctattctttaaagcttatggaaataagctga 43029423  T
Q  219 aaacaacttataaacatttcataaattgttttcataag 256  Q
    ||| | |||||| |||| | ||||| ||||||||||||    
T  43029422 aaatagcttatagacatgtaataaactgttttcataag 43029385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 3223672 - 3223747
Alignment:
Q  173 agttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttt 249  Q
    |||||||||  |||| |||||||  ||| ||||| |||||||| ||||||||||||||||||| |||||| ||||||    
T  3223672 agttgttttcgtaagttatcctagcgagcttatg-aaataagctgaaaacaacttataaacatgtcataagttgttt 3223747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 6074421 - 6074505
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagag 200  Q
    ||||||||||||||||| ||||| | || |||  ||||||||||| ||||| |||| |||||||||  ||||||| ||| |||||    
T  6074421 aagctatttctataacaaaagatgatataaagttaaactgttttcatataagctatgagttgttttcttaagctagcctgaagag 6074505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 242
Target Start/End: Complemental strand, 12477392 - 12477284
Alignment:
Q  134 aagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaac 233  Q
    |||||||||| ||| |||||||||||| | |||  |||  | | |||| |||||||||| |  ||||| ||||||||||||| |||||||||||||  ||    
T  12477392 aagataaaataaagtcaaactgttttcatgtaagatatatgcttttttaataagctatcatggagagtgtatggaaataagctgaaaacaacttatggac 12477293  T
Q  234 atttcataa 242  Q
    || ||||||    
T  12477292 atgtcataa 12477284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 12564964 - 12564884
Alignment:
Q  149 caaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    |||||||||||| ||||| |||| ||||||||| |||||||||| |  || | ||| |||||||||| ||||||| |||||    
T  12564964 caaactgttttcatataagctataagttgttttcataagctatcttttagtgcttacggaaataagctgaaaacagcttat 12564884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 256
Target Start/End: Original strand, 17269201 - 17269337
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    |||||||| |||| |||  ||||| ||| |||| ||||||| ||||| | || ||||||||| ||||||||||||  |||| ||| || ||||||   ||    
T  17269201 tatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttgttttcataagctatcctggagagcttacggtaataagttaaa 17269300  T
Q  220 aacaacttataaacatttcataaattgttttcataag 256  Q
    ||||||| || ||||| ||||||  | ||||||||||    
T  17269301 aacaactcatgaacatgtcataaggtattttcataag 17269337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 33722462 - 33722410
Alignment:
Q  178 tttttataagctatcctaaagagtttatggaaataagccgaaaacaacttata 230  Q
    |||| ||||| ||||||| |||| |||||||||||||| ||||||||||||||    
T  33722462 ttttcataagttatcctacagaggttatggaaataagctgaaaacaacttata 33722410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 248
Target Start/End: Complemental strand, 36151628 - 36151496
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||| |||||| |||||||||| ||| |||| |||||||||||||  ||| | |||||||  ||| | ||||||  ||| ||||| |||||||     
T  36151628 aagctatttcaataacaaaagataaaataaagtcaaattgttttcgtataagttataaattgttttcgtaaacaatcctagtgagcttatgaaaataagt 36151529  T
Q  216 cgaaaacaacttataaacatttcataaattgtt 248  Q
     |||||||  ||||  |||| ||||||| ||||    
T  36151528 tgaaaacaggttatggacatgtcataaactgtt 36151496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 37416838 - 37416890
Alignment:
Q  202 ttatggaaataagccgaaaacaacttataaacatttcataaattgttttcata 254  Q
    |||||||||||| | ||||||| ||||| ||||||||||||| ||||||||||    
T  37416838 ttatggaaataaactgaaaacagcttatgaacatttcataaagtgttttcata 37416890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 4215339 - 4215426
Alignment:
Q  136 gataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaaca 223  Q
    |||||||| ||| |||||||||||| ||||| |||| ||| |||||  |||| ||||||  |||||||||| |||||||  |||||||    
T  4215339 gataaaataaagtcaaactgttttcatataaactatgagtcgttttcgtaagttatccttgagagtttatgcaaataaggtgaaaaca 4215426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 5592790 - 5592695
Alignment:
Q  134 aagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    |||||||||| ||| | || |||| || ||||| |||| ||||||||| ||||||||  || ||||| ||||| |||||||| | |||||||||||    
T  5592790 aagataaaataaagtcgaattgttgtcatataagctataagttgttttcataagctagtcttaagagcttatgaaaataagctggaaacaacttat 5592695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 28077132 - 28077069
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttca 239  Q
    |||||| |||||||||  || |||| |||| ||||||||| ||||||||||||| |||||||||    
T  28077132 tgttttcataagctattttagagagcttattgaaataagctgaaaacaacttatgaacatttca 28077069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 33186080 - 33185942
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||||||| ||| |||||||||| | | | || ||||||  || ||  ||| ||||||||||||||||||||||| ||| | |||| |||||||     
T  33186080 aagctatttctattacagaagataaaataaggtcgaattgtttttatacaagttataagttgtttttataagctatcctagaga-tatatgtaaataagt 33185982  T
Q  216 cgaaaacaacttataaacatttcataaattgttttcataa 255  Q
     |||||||  ||||  | || |||||| ||||||||||||    
T  33185981 tgaaaacaggttatggaaatgtcataatttgttttcataa 33185942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 172750 - 172676
Alignment:
Q  66 gtttggataaacagtttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataa 140  Q
    |||||||||||||| |||  || |||| |||| ||||||| || ||| | ||||||||||||||||| |||||||    
T  172750 gtttggataaacagcttaaattccaacttataacataaactcttatgtataagctatttctataacaaaagataa 172676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 4363745 - 4363651
Alignment:
Q  126 tataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaa 220  Q
    ||||||| ||||| |||| | | |||||||||||| ||||| |||| |  | |||| |||||||||||| |||||||| | ||| ||||||||||    
T  4363745 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaa 4363651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 256
Target Start/End: Original strand, 6262704 - 6262825
Alignment:
Q  134 aagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaac 233  Q
    |||||||||||||| |||||| ||||  ||||| |||| || | ||||||| |||| |  || |||||| || |||||||||  ||||||||||||  ||    
T  6262704 aagataaaatcaagtcaaactatttttatataagctataagct-tttttatcagctgtaatagagagttcatagaaataagcttaaaacaacttatggac 6262802  T
Q  234 atttcataaattgttttcataag 256  Q
    || |||||| || ||||||||||    
T  6262803 atatcataagttattttcataag 6262825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 11893649 - 11893603
Alignment:
Q  183 ataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    |||||||||  | |||||||||||||||||||| |||||||||||||    
T  11893649 ataagctattttgaagagtttatggaaataagctgaaaacaacttat 11893603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 25006151 - 25006081
Alignment:
Q  122 tttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatc 192  Q
    ||||||||||| | | |||||| ||| |||| ||||||| ||||| |||| ||||||||| ||||||||||    
T  25006151 tttctataacagacggtaaaataaagtcaaattgttttcatataagctataagttgttttcataagctatc 25006081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 27140485 - 27140551
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataa 242  Q
    ||||||||||||||||| |  |||| ||||| |||||||| |||||||||||||  |||| ||||||    
T  27140485 tgtttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataa 27140551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 30259610 - 30259496
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttat-aagctatcctaaagagtttatggaaataag 214  Q
    ||||||||||||||||| || ||||||| ||| ||||||| |||  ||||| |||| || |||||  || |||||||| |  |||| |||||||||||||    
T  30259610 aagctatttctataacaaaatataaaataaagtcaaactgctttgatataagctataagctgtttgcataaagctatcatggagagcttatggaaataag 30259511  T
Q  215 ccgaaaacaacttat 229  Q
      |||||||| ||||    
T  30259510 ttgaaaacaatttat 30259496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 35058945 - 35058903
Alignment:
Q  66 gtttggataaacagtttattttgcaacatatagcataaacact 108  Q
    |||||||||||||| |||||||||||| |||||||||| ||||    
T  35058945 gtttggataaacagcttattttgcaacttatagcataagcact 35058903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 181
Target Start/End: Complemental strand, 42757324 - 42757223
Alignment:
Q  81 ttattttgcaacatatagcataaa-cactaatgaaa-aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgt 178  Q
    |||||||||| ||||||||||||| |||| || | | || ||||||| ||||||||||||||||||||  | || | |||||||||||||||| || |||    
T  42757324 ttattttgcagcatatagcataaaacacttatcatataatctatttccataacacaagataaaatcaaatc-aatttttttcgtataatctataagctgt 42757226  T
Q  179 ttt 181  Q
    |||    
T  42757225 ttt 42757223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 44422679 - 44422745
Alignment:
Q  149 caaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||||| ||||| |||| || | |||||||||||||||||  |||| ||||| ||||||||    
T  44422679 caaactgttttcatataagctataagctatttttataagctatcctggagagcttatgaaaataagc 44422745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 190
Target Start/End: Original strand, 49517021 - 49517091
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagcta 190  Q
    ||||||||||||| |||||||||| ||| |||| ||||||| | ||| |||| || |||||| ||||||||    
T  49517021 tatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcataagcta 49517091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 280
Target Start/End: Original strand, 3224361 - 3224533
Alignment:
Q  107 ctaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatg 206  Q
    |||||| | ||||||||| ||||||| | ||| || | ||| |||| ||  ||| ||||| ||||  | |||||||||||||||| ||| |||  |||||    
T  3224361 ctaatgtataagctatttatataacaaaggatcaagtaaagtcaaattgaattcatataagctatagggtgtttttataagctattctagagaacttatg 3224460  T
Q  207 gaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaatcagtgttacaagt 280  Q
     |||||||| || ||||||||||  |||| |||||| | ||||  |||| || |||||||| ||||| ||||||    
T  3224461 aaaataagctgagaacaacttatggacatgtcataagtagtttgtataaattctctcaaat-agtgtcacaagt 3224533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 256
Target Start/End: Complemental strand, 14128530 - 14128458
Alignment:
Q  183 ataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    ||||| |||||||||||| |||||||||||||| |||| ||| |||||  || | |||| ||||||||||||||    
T  14128530 ataagttatcctaaagagcttatggaaataagctgaaagcaatttatattca-tgcatagattgttttcataag 14128458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 261
Target Start/End: Complemental strand, 33723505 - 33723360
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||||||||| |    |||| || ||| |||| ||||||| ||||| |||| |  |||||| |||||||| |||  | || ||||||||||||||    
T  33723505 aagctatttctataagaatcaataacataaagtcaaattgttttcatataaactatgaactgttttcataagctaccctgtaaagcttatggaaataagc 33723406  T
Q  216 cgaaaacaacttataaacatttcataaattgttttcataagttttc 261  Q
     ||||||| || || ||||| |||| |  ||||| |||||||||||    
T  33723405 tgaaaacatctcatgaacatgtcatgagctgtttccataagttttc 33723360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 242
Target Start/End: Original strand, 34290228 - 34290309
Alignment:
Q  161 gtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataa 242  Q
    |||||| |||| || |||||| |||||||||| | ||||  ||||| |||||||| ||||||||||||| || || ||||||    
T  34290228 gtataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatatgtcataa 34290309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 34619551 - 34619474
Alignment:
Q  66 gtttggataaacagtttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaat 143  Q
    |||||||||||||| ||| |||||| | ||||||||||   || ||| | |||| |||||||||||| ||||||||||    
T  34619551 gtttggataaacagcttaatttgcagcttatagcataattgcttatgtataagccatttctataacaaaagataaaat 34619474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 39348038 - 39347977
Alignment:
Q  168 ctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    |||| ||||||||| |||| |||||||  | || |||||||||||||| |||||||||||||    
T  39348038 ctataagttgttttcataaactatcctgcaaagcttatggaaataagctgaaaacaacttat 39347977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 43954104 - 43954055
Alignment:
Q  180 tttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    |||||||| |||||| ||||| ||||||| |||||| |||||||||||||    
T  43954104 tttataagttatcctgaagagcttatggagataagctgaaaacaacttat 43954055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 44251540 - 44251601
Alignment:
Q  173 agttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaaca 234  Q
    ||||||||| |||||||| | |||| || |||| ||||||||| ||||| ||||||||||||    
T  44251540 agttgttttcataagctagcataaaaagattatagaaataagctgaaaaaaacttataaaca 44251601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 258
Target Start/End: Original strand, 45394095 - 45394204
Alignment:
Q  149 caaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgtt 248  Q
    |||||||||||  ||||||||||||  | |||| ||||| ||||||  | ||||||| ||||||||  ||||||| |||||  |||| ||||||  ||||    
T  45394095 caaactgtttttatataatctattatctcttttcataagttatcctgtaaagtttattgaaataagttgaaaacagcttatcgacatctcataagctgtt 45394194  T
Q  249 ttcataagtt 258  Q
    ||| ||||||    
T  45394195 ttcttaagtt 45394204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 51929838 - 51929785
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    |||||| ||||||||| ||| |||| ||||||||||||||||||| || |||||    
T  51929838 tgttttcataagctattctagagagcttatggaaataagccgaaatcagcttat 51929785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 4201979 - 4201935
Alignment:
Q  198 gagtttatggaaataagccgaaaacaacttataaacatttcataa 242  Q
    |||||||||||||||||| ||| ||||||||||||| | ||||||    
T  4201979 gagtttatggaaataagctgaacacaacttataaacttgtcataa 4201935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 6659502 - 6659574
Alignment:
Q  157 tttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    |||| ||||| |||| || |||||| |||||||| || | |||| |||| ||||||||| |||||||||||||    
T  6659502 tttcatataagctataagatgttttcataagctaaccaagagagcttatcgaaataagctgaaaacaacttat 6659574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 11129196 - 11129304
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    |||||||  |||| |||||||||| ||| ||||||  ||||||||||| |||  ||||||||  ||| ||||  |  |||| |||||||||||| |||||    
T  11129196 tatttcttgaacaaaagataaaattaagtcaaactactttcgtataatatataggttgttttcgtaaactattttggagagcttatggaaataaaccgaa 11129295  T
Q  220 aacaactta 228  Q
    |||| ||||    
T  11129296 aacagctta 11129304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 15361661 - 15361768
Alignment:
Q  119 ctatttctataacaca--agataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagcc 216  Q
    |||||||||||||| |  ||||||| | ||| |||| | ||||| ||||| |||| || |||||| ||||| ||| ||  ||||||||||||| |||||     
T  15361661 ctatttctataacaaagaagataaagtaaagtcaaattattttcatataagctataagctgttttcataagatattcttgagagtttatggaattaagct 15361760  T
Q  217 gaaaacaa 224  Q
    ||||||||    
T  15361761 gaaaacaa 15361768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 35590977 - 35590905
Alignment:
Q  154 tgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaact 226  Q
    |||||| |||||| |||| ||| | ||| |||||||||| |  |||| |||||||||||||| ||||||||||    
T  35590977 tgtttttgtataagctataagtcgatttcataagctatcatggagagcttatggaaataagctgaaaacaact 35590905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 280
Target Start/End: Complemental strand, 37942016 - 37941945
Alignment:
Q  208 aaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaatcagtgttacaagt 280  Q
    ||||||||||| ||||||||||  |||| |||||||||||||  ||||| | ||||||| ||| |||||||||    
T  37942016 aaataagccgagaacaacttatggacatgtcataaattgtttctataagctctctcaaa-cagcgttacaagt 37941945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 266
Target Start/End: Original strand, 42336656 - 42336712
Alignment:
Q  210 ataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    ||||| |||||||||||| |  |||| |||||| ||||||||||||||| |||||||    
T  42336656 ataagtcgaaaacaacttttggacatgtcataagttgttttcataagttatctcaaa 42336712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 47598487 - 47598431
Alignment:
Q  173 agttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    ||||||||| ||||||||||||  |||| |||||| || |||| |||||||||||||    
T  47598487 agttgttttcataagctatcctggagagcttatggcaacaagctgaaaacaacttat 47598431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 49557092 - 49557208
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttt--tataagctatcctaaagagtt----tatggaaataa 213  Q
    ||||||||||||| |||||||||| |||  |||  || ||| | ||| |||| |||||||||  ||||||||||||| ||||| |    ||| |||||||    
T  49557092 tatttctataacaaaagataaaataaagttaaatagtattcatttaagctataagttgttttcatataagctatcctgaagagctagcttatagaaataa 49557191  T
Q  214 gccgaaaacaacttata 230  Q
    || ||||||||||||||    
T  49557192 gctgaaaacaacttata 49557208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 6e-31; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 116 - 256
Target Start/End: Complemental strand, 40122875 - 40122736
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||| |||||| |||||||||| ||| |||||||||||| || || |||| ||||||||||||||||||||||||| |||| ||||||||||||    
T  40122875 aagctatttcaataacaaaagataaaataaagtcaaactgttttcata-aagctataagttgtttttataagctatcctaaaaagttaatggaaataagc 40122777  T
Q  216 cgaaaacaacttataaacatttcataaattgttttcataag 256  Q
      ||||||||||||| | || ||||||| | ||||||||||    
T  40122776 taaaaacaacttatagagatgtcataaactattttcataag 40122736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 242
Target Start/End: Original strand, 24785146 - 24785278
Alignment:
Q  110 atgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaa 209  Q
    ||||| || ||||||||| | ||||||||||||| ||| ||| ||||||| ||||||||||| |  |||||| ||||||||||||  |||| ||||| ||    
T  24785146 atgaataacctatttctaaatcacaagataaaataaagtcaatctgtttttgtataatctataacgtgttttcataagctatcctcgagagcttatgtaa 24785245  T
Q  210 ataagccgaaaacaacttataaacatttcataa 242  Q
    ||||||  |||||||||||| ||||| ||||||    
T  24785246 ataagctaaaaacaacttatgaacatgtcataa 24785278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 251
Target Start/End: Original strand, 36101509 - 36101650
Alignment:
Q  110 atgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaa 209  Q
    ||||| ||||||||||| ||| | |||||||||| ||| ||||||| ||||||||||||||| ||||||||   ||  ||||||| ||||| ||||| ||    
T  36101509 atgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataatctataagttgtttcattatactatcctgaagagcttatgaaa 36101608  T
Q  210 ataagccgaaaacaacttataaacatttcataaattgttttc 251  Q
    |||||| ||||||| ||| | ||||| ||||||  |||||||    
T  36101609 ataagctgaaaacagcttgtgaacatgtcataagctgttttc 36101650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 38462228 - 38462341
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||||||| || |||||||||| ||| |||||||||||| ||||  |||| |  |||||| ||||||||||| | | || ||||||||||||||    
T  38462228 aagctatttctataccaaaagataaaataaagtcaaactgttttcatatatgctataaactgttttcataagctatccaagatagcttatggaaataagc 38462327  T
Q  216 cgaaaacaacttat 229  Q
     |||||||||||||    
T  38462328 tgaaaacaacttat 38462341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 24887406 - 24887299
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||||||||||  ||||||||| ||| |||||||| ||| ||||| |||  || |||||| ||||||||||||  |||| |||||| |||||||    
T  24887406 aagctatttctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcctggagagcttatgggaataagc 24887307  T
Q  216 cgaaaaca 223  Q
     |||||||    
T  24887306 tgaaaaca 24887299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 215
Target Start/End: Complemental strand, 47904197 - 47904087
Alignment:
Q  105 cactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagttta 204  Q
    |||| ||||| |||||||||||||||| ||| ||||||| ||  ||| || ||||| |||||||||| ||| ||||| |||||||||| | ||||| |||    
T  47904197 cacttatgaataagctatttctataacgcaacataaaatgaaatcaagctattttcatataatctataagtggttttcataagctatcgtgaagagctta 47904098  T
Q  205 tggaaataagc 215  Q
     ||||||||||    
T  47904097 cggaaataagc 47904087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 137 - 266
Target Start/End: Complemental strand, 19679430 - 19679301
Alignment:
Q  137 ataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatt 236  Q
    ||||||| ||| |||||||||||| ||||| |||| |||||||||||||| ||||| |  |||||| |  ||||||||| | ||||| ||| | | |||     
T  19679430 ataaaataaagtcaaactgttttcttataagctataagttgtttttataaactatcttggagagttaaaagaaataagctgcaaacagctttttagcatg 19679331  T
Q  237 tcataaattgttttcataagttttctcaaa 266  Q
    |||||| |||||||| |||||| |||||||    
T  19679330 tcataagttgttttcgtaagttctctcaaa 19679301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 110 - 251
Target Start/End: Original strand, 36139819 - 36139960
Alignment:
Q  110 atgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaa 209  Q
    ||||| ||||||||||| ||| | |||||||||| ||| ||||||| |||||||||| |||| ||||||||   ||  ||||| | ||||| ||||| ||    
T  36139819 atgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataagctataagttgtttcattatactatcttgaagagcttatgaaa 36139918  T
Q  210 ataagccgaaaacaacttataaacatttcataaattgttttc 251  Q
    |||||| ||||||| ||| | ||||| ||||||  |||||||    
T  36139919 ataagctgaaaacagcttgtgaacatgtcataagctgttttc 36139960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 36646505 - 36646392
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||||||| ||| |||||||||| |||   || ||||||| |||||  ||| | ||||||| ||||||||||||| ||||||||| ||||||||     
T  36646505 aagctatttctatgacaaaagataaaataaagtataattgttttcatataagttataacttgttttcataagctatcctagagagtttatagaaataaga 36646406  T
Q  216 cgaaaacaacttat 229  Q
     ||||||| |||||    
T  36646405 tgaaaacagcttat 36646392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 2318596 - 2318703
Alignment:
Q  122 tttctataaca-caagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagcta-tcctaaagagtttatggaaataagccgaa 219  Q
    ||||||||||| ||||||||||||||  |||| ||||||| ||||| |||| ||||||||||||||| || || |  |||| |||| ||||||||| |||    
T  2318596 tttctataacaacaagataaaatcaaatcaaattgttttcatataaactataagttgtttttataagttattcttggagagcttatagaaataagctgaa 2318695  T
Q  220 aacaactt 227  Q
    ||||||||    
T  2318696 aacaactt 2318703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 242
Target Start/End: Complemental strand, 45433059 - 45432936
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccga 218  Q
    |||||||||||| | |||||||||| |||  ||| ||||||| ||| | |||| | ||||||| | |||  |||||  |||| |||||||||||||| ||    
T  45433059 ctatttctataagaaaagataaaatgaagttaaattgttttcatatgagctataaattgttttcacaagtcatcctgtagagcttatggaaataagctga 45432960  T
Q  219 aaacaacttataaacatttcataa 242  Q
    ||||||||||| ||||| ||||||    
T  45432959 aaacaacttatgaacatgtcataa 45432936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 12985408 - 12985355
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    |||||| |||||||||||| ||||  ||||||||||||||||||||||||||||    
T  12985408 tgttttcataagctatcctcaagaacttatggaaataagccgaaaacaacttat 12985355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 266
Target Start/End: Complemental strand, 14548823 - 14548694
Alignment:
Q  137 ataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatt 236  Q
    ||||||||||  ||||  |||||| ||||| |||| ||||||||| ||||| ||| ||  |||| |||||||||||||| ||||||| | ||| || ||     
T  14548823 ataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcctattaaaatg 14548724  T
Q  237 tcataaattgttttcataagttttctcaaa 266  Q
    |||||  ||||||||||||| | |||||||    
T  14548723 tcatacgttgttttcataagctctctcaaa 14548694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 134 - 254
Target Start/End: Original strand, 1816548 - 1816668
Alignment:
Q  134 aagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaac 233  Q
    |||||||||| ||| ||||||||||| ||||||  ||| ||||||||| ||||||||| ||  |||| ||||  |||||||| ||||||| | ||| ||     
T  1816548 aagataaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagctgaaaacagcctatgaaa 1816647  T
Q  234 atttcataaattgttttcata 254  Q
    || |||||| || ||||||||    
T  1816648 atgtcataagttattttcata 1816668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 116 - 232
Target Start/End: Original strand, 27792819 - 27792935
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||| | |||| |||||||||| | | |||||| ||||| ||||| ||   ||||||||| |||| ||||| |  |||| |||| |||||||||    
T  27792819 aagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataagctgcaagttgttttcataaactatcatgtagagcttatagaaataagc 27792918  T
Q  216 cgaaaacaacttataaa 232  Q
     ||||||||||||||||    
T  27792919 tgaaaacaacttataaa 27792935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 36783458 - 36783382
Alignment:
Q  115 aaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctat 191  Q
    ||||||||||||||| || |||||||||| |||  ||| ||||||| ||||| ||||||| |||||| |||||||||    
T  36783458 aaagctatttctataccaaaagataaaataaagtaaaattgttttcatataaactattagctgttttcataagctat 36783382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 22214744 - 22214669
Alignment:
Q  154 tgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    ||||||| ||||| |||| ||||||||| ||||||||||||| |||  ||| |||||||||| ||||||| |||||    
T  22214744 tgttttcatataacctataagttgttttcataagctatcctagagacattacggaaataagctgaaaacagcttat 22214669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 49587039 - 49586984
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctat 171  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||| ||||| ||||    
T  49587039 aagctatttctataacaaaagataaaataaagtcaaactgttttcatataagctat 49586984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 21574452 - 21574577
Alignment:
Q  130 acacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    |||||||||||||| |||  ||| ||||| | ||||| |||| | || ||||||||||||| | |  |||| ||||||||||||||  ||| || |||||    
T  21574452 acacaagataaaataaagttaaattgtttacatataagctataactt-tttttataagctaacatggagagcttatggaaataagctaaaagcagcttat 21574550  T
Q  230 aaacatttcataaattgttttcataag 256  Q
     ||||| |||||| |||||||||||||    
T  21574551 gaacatgtcataagttgttttcataag 21574577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 21862299 - 21862185
Alignment:
Q  116 aagctatttctataacacaagataaaat-caaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataag 214  Q
    ||||| ||||||| ||| |||||||||| |||| |||| ||||||| ||||| |||| ||| ||| | || |||||||    |||| |||||||||||||    
T  21862299 aagctgtttctattacaaaagataaaatacaagtcaaattgttttcatataagctatgagtagttctcattagctatctgggagagcttatggaaataag 21862200  T
Q  215 ccgaaaacaacttat 229  Q
    | |||||||||||||    
T  21862199 ctgaaaacaacttat 21862185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 169
Target Start/End: Original strand, 34954033 - 34954083
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatct 169  Q
    ||||||||||||||||||||||||| ||| ||| |||||||| ||||||||    
T  34954033 ctatttctataacacaagataaaataaagtcaagctgttttcatataatct 34954083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 258
Target Start/End: Original strand, 21367652 - 21367757
Alignment:
Q  154 tgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaac-atttcataaattgttttca 252  Q
    |||||||||||||| ||| ||||||||| |||||||||| |  |||  ||||| |||||||| ||||||| ||| | ||| || ||||||  ||||||||    
T  21367652 tgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataagctgttttca 21367751  T
Q  253 taagtt 258  Q
    ||||||    
T  21367752 taagtt 21367757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 23315591 - 23315672
Alignment:
Q  134 aagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||| ||| |||| ||||||| ||||  |||| || |||||  ||||||||| |||||||| ||||||||||||||    
T  23315591 aagataaaataaagtcaaattgttttcatataggctataagatgtttccataagctattctaaagagcttatggaaataagc 23315672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 256
Target Start/End: Complemental strand, 27291018 - 27290884
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    |||||||||||||  ||||||||| ||  | |||| ||||| |||||||||  || |||||  || |||||||||  |||||| |||||||||||| |||    
T  27291018 tatttctataaca--agataaaataaattcgaacttttttcatataatctaaaagctgtttgcattagctatcctgcagagttcatggaaataagctgaa 27290921  T
Q  220 aacaacttataaacatttcataaattgttttcataag 256  Q
    |||| |||||   ||| ||||||  ||||||||||||    
T  27290920 aacagcttatgggcatgtcataagctgttttcataag 27290884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 37788817 - 37788882
Alignment:
Q  126 tataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctat 191  Q
    ||||||| |||||||||| ||| | || | |||||||||||||||| ||||||||| |||||||||    
T  37788817 tataacaaaagataaaataaagtccaattattttcgtataatctataagttgttttcataagctat 37788882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 43116551 - 43116478
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagct 189  Q
    ||||||||||||||||| |||||||||||||  |||||  ||||| ||||| |||| ||| ||||| |||||||    
T  43116551 aagctatttctataacaaaagataaaatcaaatcaaacaattttcatataagctataagtcgttttcataagct 43116478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 261
Target Start/End: Original strand, 52618950 - 52619095
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||||| |||| | ||| |||| |||  ||| ||||||| |||||  ||| || |||||| | |||||||| | ||||| || || |||||||     
T  52618950 aagctatttctaaaacaaatgattaaataaagttaaattgttttcatataagttataagctgttttcacaagctatcttgaagagcttgtgaaaataagg 52619049  T
Q  216 cgaaaacaacttataaacatttcataaattgttttcataagttttc 261  Q
     ||||| | ||||| ||||| |||||||||||||| || |||||||    
T  52619050 tgaaaatagcttatgaacatgtcataaattgtttttattagttttc 52619095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 5457073 - 5457109
Alignment:
Q  222 caacttataaacatttcataaattgttttcataagtt 258  Q
    |||||||| ||||||||||||||||||||||||||||    
T  5457073 caacttatcaacatttcataaattgttttcataagtt 5457109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 36200108 - 36200176
Alignment:
Q  181 ttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttt 249  Q
    ||||||||||||||  |||| | |||||||||||| |||||||||||||  |||| |||||| ||||||    
T  36200108 ttataagctatcctgtagagctcatggaaataagctgaaaacaacttatggacatgtcataagttgttt 36200176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 47249523 - 47249467
Alignment:
Q  202 ttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
    ||||| ||||||||| |||||||||||| ||||| |||||| | |||||||||||||    
T  47249523 ttatgaaaataagccaaaaacaacttatgaacatgtcataagtggttttcataagtt 47249467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 139912 - 139959
Alignment:
Q  96 tagcataaacactaatgaaaaagctatttctataacacaagataaaat 143  Q
    |||||||| |||| ||||| ||||||||||||| ||||||||||||||    
T  139912 tagcataagcacttatgaataagctatttctattacacaagataaaat 139959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 30322109 - 30322046
Alignment:
Q  150 aaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataa 213  Q
    ||||||||| || |||| || | ||||||||| ||||| |||||||||||| ||||||||||||    
T  30322109 aaactgtttccgaataagctgtaagttgttttcataagttatcctaaagagcttatggaaataa 30322046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 34958259 - 34958318
Alignment:
Q  100 ataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgtttt 159  Q
    |||| |||| ||||| || ||||||||||||||||||||||||| ||| ||| |||||||    
T  34958259 ataagcacttatgaataaactatttctataacacaagataaaataaagtcaagctgtttt 34958318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 42745053 - 42745124
Alignment:
Q  184 taagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataa 255  Q
    ||||||||| | || || |||||||||||||  ||||||||||||| ||||| |||||| |||||| |||||    
T  42745053 taagctatcttcaaaagcttatggaaataagatgaaaacaacttatgaacatgtcataagttgtttacataa 42745124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 20502157 - 20502083
Alignment:
Q  150 aaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaa 224  Q
    ||||||||||| ||||  |||| || |||||| |||||||||||| ||||| |||||  ||||||| ||||||||    
T  20502157 aaactgttttcatatacgctataagctgttttcataagctatcctgaagagcttatgagaataagctgaaaacaa 20502083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 31403153 - 31403207
Alignment:
Q  175 ttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    ||||||| ||||||||||||| |||||| |||| ||||||| ||||||| |||||    
T  31403153 ttgttttgataagctatcctagagagttcatggtaataagctgaaaacagcttat 31403207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 266
Target Start/End: Original strand, 34382933 - 34383039
Alignment:
Q  160 cgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttt 259  Q
    |||||||  ||| |||| |||| |||||||||||| || || ||| | |||||||  |||||||||||||| |||| ||||||  ||||| |||||| |     
T  34382933 cgtataagttataagttcttttcataagctatcctgaaaagcttaagaaaataagatgaaaacaacttatagacatatcataatctgtttccataagcta 34383032  T
Q  260 tctcaaa 266  Q
    |||||||    
T  34383033 tctcaaa 34383039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 41724251 - 41724309
Alignment:
Q  208 aaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    |||||||| |||||||||||||  |||| |||||| |||||| ||||||||||| ||||    
T  41724251 aaataagctgaaaacaacttatggacatgtcataagttgtttccataagttttcacaaa 41724309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 249
Target Start/End: Complemental strand, 3044378 - 3044249
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    ||||||||||||  |||| ||||| ||  ||| |||||||| |||||||||| |  ||||||  || |||| |||  |||| ||||| |||||||  |||    
T  3044378 tatttctataacgaaagacaaaataaaaccaatctgttttcatataatctataacctgttttcttatgctaacctggagagcttatgaaaataagttgaa 3044279  T
Q  220 aacaacttataaacatttcataaattgttt 249  Q
    |||| ||||| ||||| |||||| ||||||    
T  3044278 aacagcttatgaacatgtcataagttgttt 3044249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 13709886 - 13709833
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    |||||| ||||||||||||  ||||||||| ||||||| | |||||||||||||    
T  13709886 tgttttcataagctatcctggagagtttattgaaataaactgaaaacaacttat 13709833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 229
Target Start/End: Original strand, 23785206 - 23785315
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    |||||||| | || |||||||||| ||| |||||||| ||| ||||| |||| |  |||||| | ||||| || |  |||| ||||||||| |||| |||    
T  23785206 tatttctacagcagaagataaaataaagtcaaactgtattcatataagctataaactgttttcacaagctctcatggagagcttatggaaacaagctgaa 23785305  T
Q  220 aacaacttat 229  Q
    ||||||||||    
T  23785306 aacaacttat 23785315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 255
Target Start/End: Complemental strand, 25453963 - 25453842
Alignment:
Q  135 agataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaaca 234  Q
    ||||||||| ||| |||||||||||||||||| |||| |  | |||| |||| |||||||  | || ||||| |||||||| ||||| | ||| | ||||    
T  25453963 agataaaataaagtcaaactgttttcgtataacctataacctattttcataaactatcctggaaagcttatgaaaataagctgaaaagagcttgtgaaca 25453864  T
Q  235 -tttcataaattgttttcataa 255  Q
     ||||||||  |||||||||||    
T  25453863 ttttcataagctgttttcataa 25453842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 26478954 - 26479007
Alignment:
Q  178 tttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataa 231  Q
    |||| ||||||||||||||||||| |||| |||||||   ||||||||||||||    
T  26478954 ttttcataagctatcctaaagagtatatgaaaataagttaaaaacaacttataa 26479007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 26542540 - 26542617
Alignment:
Q  172 tagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttt 249  Q
    ||||| |||| |||||||||  |  ||||||||||||||||||  |||||||| ||||| |||| |||||| ||||||    
T  26542540 tagttattttcataagctattatggagagtttatggaaataagttgaaaacaagttatagacatatcataagttgttt 26542617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 266
Target Start/End: Original strand, 32711429 - 32711522
Alignment:
Q  173 agttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    |||| |||| ||||| |||||||  ||| ||| |||||||||| ||||||||| |||||||||   ||||  | |||||||||||| |||||||    
T  32711429 agttattttcataagttatcctatggagcttaaggaaataagctgaaaacaacctataaacatgctataagctattttcataagttctctcaaa 32711522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 42084374 - 42084301
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagct 189  Q
    ||||||||||||||||| | |||||||| | | |||  ||||||  ||||| |||||||||||||| |||||||    
T  42084374 aagctatttctataacaaaggataaaataatgtcaacttgttttgatataagctattagttgttttcataagct 42084301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 43115049 - 43115142
Alignment:
Q  162 tataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataa 255  Q
    ||||| |||| ||||||||| || | ||||| |  |||| |||||||||||||| |||||||| ||||  |||| |||||| |||||| |||||    
T  43115049 tataagctataagttgttttcatgaactatcattgagagcttatggaaataagctgaaaacaagttatggacatgtcataagttgtttccataa 43115142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 44014192 - 44014253
Alignment:
Q  81 ttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaa 142  Q
    |||||||||| | |||||||||| |||| ||| | ||||||||||||||||  |||||||||    
T  44014192 ttattttgcagcctatagcataaccacttatgtataagctatttctataactaaagataaaa 44014253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 23808121 - 23808037
Alignment:
Q  182 tataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    ||||||||||| |  |||||||||| |||||||  |||||||| || | ||||| ||||||  || |||||||||||||| ||||    
T  23808121 tataagctatcttggagagtttatgaaaataagatgaaaacaatttgtgaacatgtcataagctgctttcataagttttcccaaa 23808037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 30573991 - 30573895
Alignment:
Q  162 tataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
    ||||||||||  | |||||| |||||||||| |  |||| | ||| | |||||| ||||||| ||||| |||||  ||||| |||||||||||||||    
T  30573991 tataatctatatgatgttttcataagctatcttggagagctgatgaacataagctgaaaacagcttatgaacatgccataatttgttttcataagtt 30573895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 30956749 - 30956673
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatc 192  Q
    |||||||||||||| || |||||||||| |||  ||| |||||| |||||  |||| ||||||||| | ||||||||    
T  30956749 aagctatttctatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatc 30956673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 30972561 - 30972485
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatc 192  Q
    |||||||||||||| || |||||||||| |||  ||| |||||| |||||  |||| ||||||||| | ||||||||    
T  30972561 aagctatttctatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatc 30972485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 256
Target Start/End: Original strand, 37273141 - 37273221
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    |||||| |||||||||| |  |||  |||||||||||||  |||||||||||||  |||| |||||| |||||| ||||||    
T  37273141 tgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataag 37273221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 66 - 256
Target Start/End: Original strand, 12110257 - 12110447
Alignment:
Q  66 gtttggataaacagtttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtata 165  Q
    |||| ||||||||| ||| |||||||| |||||||||| |||| ||||| || |||||||||| |||||||||||||| ||| |||| |||||| |||||    
T  12110257 gtttcgataaacagcttaatttgcaacttatagcataagcacttatgaataacctatttctattacacaagataaaataaagtcaaattgttttggtata 12110356  T
Q  166 atctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    | |||| || |||||| |||||||||| | ||||  ||||| |||||| |  ||||||  || | ||||| |||||| |||||||||||||    
T  12110357 agctataagctgttttcataagctatcttgaagaacttatgaaaataatctaaaaacagtttgtgaacatgtcataagttgttttcataag 12110447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 116 - 221
Target Start/End: Complemental strand, 3610863 - 3610758
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||||| |||| |||||||||| ||||||||||||||| |||||| |||| |||||||||  ||| |||||||| |||| |||| |||||||||    
T  3610863 aagctatttctacaacaaaagataaaatgaaggcaaactgttttggtataagctataagttgttttcgtaaactatcctagagagcttatagaaataagc 3610764  T
Q  216 cgaaaa 221  Q
     |||||    
T  3610763 tgaaaa 3610758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 256
Target Start/End: Original strand, 33894570 - 33894714
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgttttta-----taagctatcctaaagagtttatggaaa 210  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||| ||||| || |  ||||||||||     |||||||||||  | ||||||| ||||    
T  33894570 aagctatttctataacaaaagataaaat-aagtcaaactgttttcatataagctttatgttgtttttacaacttaagctatcctggaaagtttattgaaa 33894668  T
Q  211 taagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    ||||| |||||||||||||  |||| |||||   ||||||||||||    
T  33894669 taagctgaaaacaacttatggacatgtcatatgctgttttcataag 33894714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 44917703 - 44917570
Alignment:
Q  72 ataaacagtttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctat 171  Q
    ||||||||||||||||||| | || ||||||| | || || || ||| | ||||||||||||| ||||||   ||| ||||||||||| |||||||||||    
T  44917703 ataaacagtttattttgcagcttaaagcataagcgcttataaataagttgtttctataacacaggataaagcaaagtcaaactgtttttgtataatctat 44917604  T
Q  172 tagttgtttttataagctatcctaaagagtttat 205  Q
     ||||||||  |||| | ||||||||||| ||||    
T  44917603 aagttgtttccataaaccatcctaaagagattat 44917570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 266
Target Start/End: Complemental strand, 25670671 - 25670559
Alignment:
Q  154 tgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcat 253  Q
    ||||||| ||||| |||| | ||||||||||||  |||| |  |||| || || |||||||| |||||||| |||| ||||| |||||| ||||||||||    
T  25670671 tgttttcatataagctatcaattgtttttataacatatcttggagagcttgtgaaaataagctgaaaacaatttattaacatgtcataagttgttttcat 25670572  T
Q  254 aagttttctcaaa 266  Q
    |||||||||||||    
T  25670571 aagttttctcaaa 25670559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 212
Target Start/End: Original strand, 46945850 - 46945952
Alignment:
Q  110 atgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaa 209  Q
    ||||| ||||||||| |||||||||||||||||||||  |||| ||||   ||||||||||| | |||||||  ||||||||||  ||||| ||||||||    
T  46945850 atgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgttttcttaagctatcccgaagagcttatggaa 46945949  T
Q  210 ata 212  Q
    |||    
T  46945950 ata 46945952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 85 - 258
Target Start/End: Original strand, 30535479 - 30535652
Alignment:
Q  85 tttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttat 184  Q
    |||||| | |||||||||| |||| | | | ||| || |||||||||| |||||||||| ||    || |||||||||||||||||| || |||||  ||    
T  30535479 tttgcagcttatagcataagcacttacgtataagttacttctataacaaaagataaaattaaattgaagtgttttcgtataatctataagctgtttccat 30535578  T
Q  185 aagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
    |||||||| || |||   |||| |||||| | ||||||| ||||  ||||| |||||| |||||||||||||||    
T  30535579 aagctatcttatagaacatatgaaaataacctgaaaacagcttacgaacatatcataagttgttttcataagtt 30535652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 41668283 - 41668206
Alignment:
Q  66 gtttggataaacagtttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaat 143  Q
    |||||||||||||| |||||||||| |  ||||||||| | || ||||| |||||||||||||||| |||||||||||    
T  41668283 gtttggataaacagcttattttgcagccgatagcataagcgcttatgaataagctatttctataacccaagataaaat 41668206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 41668961 - 41668884
Alignment:
Q  66 gtttggataaacagtttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaat 143  Q
    |||||||||||||| |||||||||| |  ||||||||| | || ||||| |||||||||||||||| |||||||||||    
T  41668961 gtttggataaacagcttattttgcagccgatagcataagcgcttatgaataagctatttctataacccaagataaaat 41668884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 190
Target Start/End: Complemental strand, 2727480 - 2727409
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagcta 190  Q
    |||||||||||||| |||||||||| |||||||||| ||||| ||| | |||| | ||||||||||||||||    
T  2727480 ctatttctataacaaaagataaaataaaggcaaactcttttcatatcaactataaattgtttttataagcta 2727409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 266
Target Start/End: Complemental strand, 5006632 - 5006484
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||| |||||||| |||||||||| ||| |||||||||||| |||||  ||| | ||||||| |||||||| |||  |||||| ||||  | |||     
T  5006632 aagctattcctataacaaaagataaaataaagtcaaactgttttcatataaggtataaattgttttcataagctaccctggagagttcatgg--agaagg 5006535  T
Q  216 cgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
      ||||||||||||| |||| | |||| |||||| |||||| |||| ||||    
T  5006534 taaaaacaacttatagacatgttataagttgtttccataagctttcacaaa 5006484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 255
Target Start/End: Complemental strand, 9423657 - 9423578
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataa 255  Q
    |||||| ||||||||||||  |||| || | ||||||||| ||||||||||||| ||||| ||||||||||||| |||||    
T  9423657 tgttttaataagctatcctggagagcttcttgaaataagctgaaaacaacttatgaacatgtcataaattgtttccataa 9423578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 267
Target Start/End: Complemental strand, 44151592 - 44151448
Alignment:
Q  127 ataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaact 226  Q
    |||||| |||||| ||| |||  ||||||||| | ||||| |||| ||||||||| |||| ||||| | || || |||||||||||||| ||||||| ||    
T  44151592 ataacaaaagatagaataaagtaaaactgtttccatataagctataagttgttttcataaactatcttgaaaagcttatggaaataagctgaaaacatct 44151493  T
Q  227 tataaacatttcat----aaattgttttcataagttttctcaaat 267  Q
    |||  |||| ||||    |||||||||||||||| | ||||||||    
T  44151492 tatggacatgtcataaaaaaattgttttcataagctctctcaaat 44151448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 6824816 - 6824888
Alignment:
Q  66 gtttggataaacagtttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagata 139  Q
    |||||||||||||||||| |||||| | |||||||||||| || ||| | ||||||||||||||||| ||||||    
T  6824816 gtttggataaacagtttaatttgcaccttatagcataaacgct-atgtataagctatttctataacaaaagata 6824888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 134 - 249
Target Start/End: Complemental strand, 12234992 - 12234879
Alignment:
Q  134 aagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaac 233  Q
    |||||||||| | | ||| ||||||||||||||  ||| ||   ||||||| |||| ||||| |||| |||||||||||||| ||||||| |||||| ||    
T  12234992 aagataaaataatgtcaatctgttttcgtataagttataag--atttttatgagctttcctagagagcttatggaaataagctgaaaacagcttatagac 12234895  T
Q  234 atttcataaattgttt 249  Q
    || |||||| ||||||    
T  12234894 atgtcataagttgttt 12234879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 24363667 - 24363611
Alignment:
Q  173 agttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    ||||||||| ||||||||||||  |||| |||||||||||||| |||||||||||||    
T  24363667 agttgttttcataagctatcctggagaggttatggaaataagctgaaaacaacttat 24363611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 28165044 - 28165156
Alignment:
Q  122 tttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaa 221  Q
    ||||||||||| |||||||||| ||| |||| ||||||  ||||| |||| |  ||| ||||||||||||| |  |||| |||||||||||||  |||||    
T  28165044 tttctataacaaaagataaaatgaagtcaaattgttttaatataagctataaactgtctttataagctatcatggagagcttatggaaataagttgaaaa 28165143  T
Q  222 caacttataaaca 234  Q
    || ||||| ||||    
T  28165144 cagcttatgaaca 28165156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 9527211 - 9527140
Alignment:
Q  118 gctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagct 189  Q
    ||||| ||||||||| |||||| ||| ||| |||||||||||| ||||| |||| ||||||||| |||||||    
T  9527211 gctatatctataacaaaagatataataaagtcaaactgttttcatataaactataagttgttttcataagct 9527140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 17989136 - 17989049
Alignment:
Q  126 tataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataa 213  Q
    ||||||| || ||||||| ||| |||||||||||| ||||| |||| | ||||||| ||||||| |||| ||||| ||||| ||||||    
T  17989136 tataacaaaatataaaataaagtcaaactgttttcatataaactataatttgttttcataagctctcctgaagagcttatgaaaataa 17989049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 27481417 - 27481310
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||||||||||| | |||||||  ||| |||||||||| | ||||| |||| |||| |||| |||||||||| |  | || |||||||||||| |    
T  27481417 aagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagttattttcataagctatcatggatagcttatggaaataaac 27481318  T
Q  216 cgaaaaca 223  Q
    | ||||||    
T  27481317 ccaaaaca 27481310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 38010665 - 38010780
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    ||||| || |||| |||||||||  ||| |||| ||||||| ||||| |||| || |||||| |||| |||||||| |||  ||||||||||||||  ||    
T  38010665 tatttttaaaacaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaa 38010764  T
Q  220 aacaacttataaacat 235  Q
    |||| ||||| |||||    
T  38010765 aacagcttatgaacat 38010780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 2999141 - 2999243
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactg-ttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccg 217  Q
    |||||||||||||| |||||||||| ||| ||||| | ||||| |||||  | | |||||||| | |||||||| |||||||  ||||||||||||| ||    
T  2999141 ctatttctataacaaaagataaaataaagtcaaaccgtttttcatataagatgtaagttgtttctttaagctattctaaagatcttatggaaataagtcg 2999240  T
Q  218 aaa 220  Q
    |||    
T  2999241 aaa 2999243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 39169538 - 39169460
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcct 194  Q
    |||||||||| || |||||||| ||||| ||| || |||||||| ||||||||||| |  |||||| ||||||||||||    
T  39169538 aagctatttccattacacaagaaaaaatgaagtcagactgtttttgtataatctataaactgttttcataagctatcct 39169460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 44910551 - 44910661
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||||||| || |||| ||||| ||| |||||| |||||  | || |||  ||||||||| |||| ||||| |  |||| || |||||||||||    
T  44910551 aagctatttctatatcaaaagagaaaataaagtcaaacttttttcacacaagctaaaagttgttttcataaactatcatggagagcttgtggaaataagc 44910650  T
Q  216 cgaaaacaact 226  Q
    |||||||||||    
T  44910651 cgaaaacaact 44910661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 2825308 - 2825235
Alignment:
Q  162 tataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacat 235  Q
    ||||| |||| ||||||||| | ||||||||||| |||  |||||||||||||| ||||| ||||||| |||||    
T  2825308 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 2825235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 22759133 - 22759230
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataa 213  Q
    ||||||||| ||||||| |||||||||| |||| ||| ||||||| ||||| |||  || || ||| |||||||||||   |||| ||||||||||||    
T  22759133 aagctatttgtataacaaaagataaaataaaggaaaattgttttcatataagctaaaagctgatttcataagctatccaggagagcttatggaaataa 22759230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 45813303 - 45813238
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttt 181  Q
    |||||||||||||| || |||||||||| ||| |||  ||||||| |||||||||| |||||||||    
T  45813303 aagctatttctataccaaaagataaaataaagtcaacttgttttcatataatctataagttgtttt 45813238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 1645722 - 1645678
Alignment:
Q  217 gaaaacaacttataaacatttcataaattgttttcataagttttc 261  Q
    ||||||||||||||||||| |||||| |||||| |||||||||||    
T  1645722 gaaaacaacttataaacatgtcataagttgtttacataagttttc 1645678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 26935618 - 26935554
Alignment:
Q  178 tttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataa 242  Q
    |||| |||| |||| |||||||| |||||||||||||| ||||||| ||||| || |||||||||    
T  26935618 ttttcataatctattctaaagagcttatggaaataagctgaaaacagcttatgaatatttcataa 26935554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 40428569 - 40428609
Alignment:
Q  183 ataagctatcctaaagagtttatggaaataagccgaaaaca 223  Q
    |||||||||||||||||| |||||||||||||| |||||||    
T  40428569 ataagctatcctaaagagcttatggaaataagctgaaaaca 40428609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 256
Target Start/End: Original strand, 46081980 - 46082123
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaa-ctgttttcgtataatctattagttgtttttataa--gctatcctaaagagtttatggaaata 212  Q
    ||||||||||||||||  ||| |||||  ||| |||| |||||||| |||||  ||| ||||||||| |||   ||||| ||  |||| ||||| |||||    
T  46081980 aagctatttctataacgaaagttaaaacaaagtcaaaactgttttcatataagttataagttgttttcatagacgctattctggagagcttatgaaaata 46082079  T
Q  213 agccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    ||| |||||||||||||   ||| |||||| |||||||||||||    
T  46082080 agctgaaaacaacttatggtcatgtcataagttgttttcataag 46082123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 46086397 - 46086493
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||||||| ||||| ||| |||  |||| |||||  |||||  ||||  |||||||| ||| |||||| | ||||||||||||||||||||    
T  46086397 ctatttctataacaaaagatgaaaacaaatcaaattgtttgagtatatactataggttgttttcataggctatcttgaagagtttatggaaataagc 46086493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 30496654 - 30496721
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataa 186  Q
    |||||||||||||| || ||||||| ||| |||| ||||||||||||| ||||  |||||||| ||||    
T  30496654 ctatttctataacaaaatataaaataaagtcaaattgttttcgtataacctataggttgttttcataa 30496721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 40530480 - 40530413
Alignment:
Q  168 ctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacat 235  Q
    |||| ||||||||| |||||||||||||||||  ||||| |||||||  |||||||| ||||| ||||    
T  40530480 ctataagttgttttaataagctatcctaaagaacttatgaaaataagttgaaaacaatttatagacat 40530413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 45777284 - 45777229
Alignment:
Q  126 tataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttt 181  Q
    ||||||| |||||||||| ||| |||||||||||| ||||| |||| |||||||||    
T  45777284 tataacaaaagataaaattaagtcaaactgttttcatataaactataagttgtttt 45777229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 4966163 - 4966229
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataa 242  Q
    |||||| |||||| ||||| ||||| |||||||||||| | |||||||||||||  |||| ||||||    
T  4966163 tgttttcataagccatcctgaagagcttatggaaataaactgaaaacaacttatggacatatcataa 4966229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 28440466 - 28440571
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagt-ttatggaaataag 214  Q
    ||||||||||  ||||| |||||||||| ||| ||||  ||||||||||||||||  |||||| |  ||||||||| ||||| ||| |||| ||||||||    
T  28440466 aagctatttcagtaacaaaagataaaataaagtcaaatggttttcgtataatctaaaagttgtataaataagctatactaaa-agtcttatagaaataag 28440564  T
Q  215 ccgaaaa 221  Q
    | |||||    
T  28440565 ctgaaaa 28440571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 29363478 - 29363572
Alignment:
Q  129 aacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaaca 223  Q
    |||| |||||||||| ||| |||||||||||| ||| |  ||| || |||| | ||||| ||||||  |||| |||||||||||| |||||||||    
T  29363478 aacagaagataaaataaagtcaaactgttttcatattagttataagctgttatcataagttatcctggagagcttatggaaataacccgaaaaca 29363572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 35536054 - 35536104
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataa 166  Q
    ||||||||||||||||| |||||||||| ||| |||| ||||||| |||||    
T  35536054 aagctatttctataacataagataaaataaagtcaaattgttttcatataa 35536104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 224
Target Start/End: Original strand, 45530418 - 45530576
Alignment:
Q  66 gtttggataaacagtttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtata 165  Q
    |||||||||||||  |||||| ||| |  | ||||||| |||| ||||  ||||| ||| |  ||||||||||||| | ||  ||||||||||  |||||    
T  45530418 gtttggataaacaacttatttagcagctaacagcataagcacttatgactaagctttttatgaaacacaagataaattaaaatcaaactgtttgtgtata 45530517  T
Q  166 atctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaa 224  Q
    || ||  ||||||||| |||| ||||||  ||| | |||||||||| ||| ||||||||    
T  45530518 atataaaagttgttttcataatctatccggaagtgattatggaaattagctgaaaacaa 45530576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 7244687 - 7244760
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttt 249  Q
    |||||| |||||||||  |  |||| ||||| |||||||| ||||||||||||| | ||| |||||||||||||    
T  7244687 tgttttcataagctatattggagagcttatgaaaataagctgaaaacaacttatgagcatgtcataaattgttt 7244760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 20888465 - 20888381
Alignment:
Q  165 aatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttca 252  Q
    ||||||| || ||||| ||||||||||||  ||||   | ||||||||||| ||||||||||||| |||||  ||||| |||||||||    
T  20888465 aatctataagctgtttctataagctatccagaaga---tgtggaaataagctgaaaacaacttatgaacatggcataagttgttttca 20888381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 36370633 - 36370713
Alignment:
Q  132 acaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataa 213  Q
    |||||||||||| |||  |||||||||||  |||| |||| ||||||||  |||| ||||||| ||||| ||||||||||||    
T  36370633 acaagataaaat-aagttaaactgttttcacataagctataagttgtttccataaactatcctgaagagcttatggaaataa 36370713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 44241811 - 44241911
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    |||||||||||||  ||||||||| || |  |||| |||| |||||| |||| ||||||||| |||||||||| | || || |||| ||||||||| |||    
T  44241811 tatttctataacaacagataaaat-aaagttaactatttttgtataacctataagttgttttcataagctatcttgaatagcttatagaaataagctgaa 44241909  T
Q  220 aa 221  Q
    ||    
T  44241910 aa 44241911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 46104644 - 46104551
Alignment:
Q  162 tataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataa 255  Q
    ||||| |||| ||||||||| ||||||||| || ||||| ||||| |||||||| | |||||  ||||  |||| |||| | ||||||||||||    
T  46104644 tataagctataagttgttttcataagctatgctgaagagcttatgaaaataagctggaaacattttattgacatgtcatgagttgttttcataa 46104551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 229
Target Start/End: Original strand, 3468578 - 3468674
Alignment:
Q  133 caagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    ||||||||||| ||| |||||| |||||||||||  ||| || | |||| |||| |||||||| |||  || ||||||||||  | |||||||||||    
T  3468578 caagataaaatgaagtcaaactattttcgtataagttataagcttttttcataatctatcctagagaacttgtggaaataagttggaaacaacttat 3468674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 20553102 - 20553190
Alignment:
Q  168 ctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    |||| ||||||||| | ||| |||||||  ||| |||||||||||| | ||||||||||||| ||||| || |||  ||||| ||||||    
T  20553102 ctataagttgttttcacaagttatcctagtgagcttatggaaataatctgaaaacaacttatgaacatgtcgtaagctgtttccataag 20553190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 28128513 - 28128410
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    ||||||||| |||||||||||||| ||| |||| | ||||| || || |||| || ||||| | ||||||||  |  ||| ||||||||||||||| |||    
T  28128513 tatttctattacacaagataaaatgaagtcaaattattttcatagaagctatcagctgtttat-taagctattttggagaatttatggaaataagctgaa 28128415  T
Q  220 aacaa 224  Q
    |||||    
T  28128414 aacaa 28128410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 213
Target Start/End: Complemental strand, 30456572 - 30456476
Alignment:
Q  117 agctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataa 213  Q
    ||||||||||| |||| |||||||||| ||| |||| ||||||| |||||  ||| ||| ||||| |||| ||||| |  |||| ||||| ||||||    
T  30456572 agctatttctaaaacaaaagataaaataaagtcaaattgttttcatataagttataagtggttttcataaactatcttggagagcttatgaaaataa 30456476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 33294603 - 33294555
Alignment:
Q  218 aaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    |||||||||||| ||||| |||||||||||||| ||||| | |||||||    
T  33294603 aaaacaacttattaacatgtcataaattgtttttataaggtatctcaaa 33294555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 256
Target Start/End: Complemental strand, 33646023 - 33645944
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    |||||| |||||||||| |  |||| |||||||||||| |  ||||||||||||| |||| |||||| |||||| ||||||    
T  33646023 tgttttcataagctatc-tggagagcttatggaaataacctaaaaacaacttatagacatgtcataagttgtttccataag 33645944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 229
Target Start/End: Complemental strand, 36484165 - 36484045
Alignment:
Q  110 atgaaaaagctatttctataacacaagataaaatcaaggcaa-actgttttcgtataatctattagttgtttttataagctatcctaaagagtttatgga 208  Q
    ||||| ||||| ||||||||||||| || ||||| ||| |||   | |||||||| ||||||| ||||||||| | ||| |||||| ||||| |||| ||    
T  36484165 atgaataagctctttctataacacacgaaaaaataaagtcaatttttttttcgtagaatctataagttgttttcacaagttatcctgaagagcttataga 36484066  T
Q  209 aataagccgaaaacaacttat 229  Q
    |||| |  ||||||| |||||    
T  36484065 aatatgttgaaaacaccttat 36484045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 36537957 - 36538005
Alignment:
Q  218 aaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    |||||||||||| ||||| |||||| |||||| |||||||| |||||||    
T  36537957 aaaacaacttatgaacatgtcataagttgtttccataagttctctcaaa 36538005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 39505960 - 39506008
Alignment:
Q  173 agttgtttttataagctatcctaaagagtttatggaaataagccgaaaa 221  Q
    ||||||||| ||||||||| ||  ||||||||||||||||||| |||||    
T  39505960 agttgttttcataagctattctggagagtttatggaaataagctgaaaa 39506008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 82)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 70 - 255
Target Start/End: Original strand, 41817069 - 41817254
Alignment:
Q  70 ggataaacagtttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatct 169  Q
    |||||||||  ||||||||| || |||| ||||||  || ||||| |||||||||||||||||||||| ||| | || ||||||| |||| ||||||| |    
T  41817069 ggataaacaacttattttgccacttataacataaatgcttatgaataagctatttctataacacaagagaaattaaaagcaaactatttttgtataatgt 41817168  T
Q  170 attagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataa 255  Q
     | || | |||| |||| |||||||  |||| |||||||||||||| |||||||| |||| ||||| ||||||  |||||||||||    
T  41817169 gtaagctattttcataaactatcctggagagcttatggaaataagctgaaaacaaattatcaacatgtcataagatgttttcataa 41817254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 41407023 - 41407111
Alignment:
Q  117 agctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttat 205  Q
    ||||||||||||||||||||||||||| |||  |||||| ||| ||||| ||||| ||||||||| |||||||||||| ||||||||||    
T  41407023 agctatttctataacacaagataaaataaagttaaactgcttttgtatattctataagttgttttcataagctatccttaagagtttat 41407111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 280
Target Start/End: Original strand, 787278 - 787442
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgttttt-ataagctatcctaaagagtttatggaaataag 214  Q
    |||||||||||||||||||||||||||| ||| |||  |||||| ||| ||||||| |  ||||||| |||| ||||| || |  ||||||||| |||||    
T  787278 aagctatttctataacacaagataaaataaagtcaacttgtttttgtaaaatctataatctgtttttcataaactatcttagatggtttatggagataag 787377  T
Q  215 ccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaatcagtgttacaagt 280  Q
    | ||||||| |||||  |||| ||||||  |||||||||||||| || |||| |||||| ||||||    
T  787378 ctgaaaacagcttatggacatgtcataagctgttttcataagttctcacaaa-cagtgtcacaagt 787442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 266
Target Start/End: Original strand, 39621894 - 39622048
Alignment:
Q  110 atgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaa 209  Q
    ||||| ||| |||||||||||||||| ||||||| ||| |||||| |||  ||||||||||| || |||||| ||||| |||||  |  || ||| ||||    
T  39621894 atgaataagatatttctataacacaaaataaaataaagtcaaacttttt--gtataatctataagctgttttcataagttatccggacaagcttaaggaa 39621991  T
Q  210 ataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    |||||| |||||||| |||| ||  | |||||| ||||||||||||||| |||||||    
T  39621992 ataagctgaaaacaatttatgaatttgtcataagttgttttcataagttctctcaaa 39622048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 258
Target Start/End: Original strand, 40158698 - 40158807
Alignment:
Q  149 caaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgtt 248  Q
    |||||||||||||||||| | || ||||||||| ||||| ||| ||  |||| ||||| || ||||| ||||||||||||||||||| ||||||  ||||    
T  40158698 caaactgttttcgtataagcaataagttgttttcataagttattctggagagcttatgtaattaagctgaaaacaacttataaacatgtcataagctgtt 40158797  T
Q  249 ttcataagtt 258  Q
    ||||||||||    
T  40158798 ttcataagtt 40158807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 134 - 266
Target Start/End: Original strand, 35485882 - 35486014
Alignment:
Q  134 aagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaac 233  Q
    |||||||||| ||| |||||| |||   ||||| |||| |||||||||||||||||||||| |||||  ||||||||| ||| ||||||| ||||| |||    
T  35485882 aagataaaataaagtcaaactatttcattataagctataagttgtttttataagctatcctgaagagcctatggaaatgagctgaaaacagcttatgaac 35485981  T
Q  234 atttcataaattgttttcataagttttctcaaa 266  Q
    || |||||| ||| |||  |||||| |||||||    
T  35485982 atatcataagttgctttagtaagttctctcaaa 35486014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 266
Target Start/End: Complemental strand, 26857231 - 26857083
Alignment:
Q  118 gctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccg 217  Q
    |||||||||||||||||||||||||| ||| |||||||||||   ||||| ||| ||   ||||| ||||||||| |  ||||||| ||||||||||| |    
T  26857231 gctatttctataacacaagataaaatgaagtcaaactgtttttacataatatataagccatttttgtaagctatcttggagagtttgtggaaataagctg 26857132  T
Q  218 aaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    |||| |   | | ||| | |||||| |||||||||||||||||| ||||    
T  26857131 aaaatagactctgaacctgtcataagttgttttcataagttttcccaaa 26857083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 193
Target Start/End: Original strand, 4090290 - 4090373
Alignment:
Q  110 atgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcc 193  Q
    ||||| |||||||||| ||||||||||||||||| ||| |||| |||||  ||||||||||| ||||||||  |||||||||||    
T  4090290 atgaataagctatttccataacacaagataaaataaagtcaaattgtttcggtataatctataagttgtttacataagctatcc 4090373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 43259781 - 43259894
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||||||||||||||||||||| ||| ||||  ||||| |||||||| |  || |||||| || || |||| | ||||| ||||||||||||||    
T  43259781 aagctatttctataacacaagataaaataaagtcaaatagtttttgtataatcaacaagctgttttcattaggtatcttgaagagcttatggaaataagc 43259880  T
Q  216 cgaaaacaacttat 229  Q
      |||||| |||||    
T  43259881 taaaaacagcttat 43259894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 208
Target Start/End: Original strand, 10143123 - 10143211
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatgga 208  Q
    ||||||||||||| |||||||||| ||| |||||||||||  ||||| |||| |||| |||| |||||||||| |  ||||||||||||    
T  10143123 tatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctatcatggagagtttatgga 10143211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 214
Target Start/End: Complemental strand, 34055022 - 34054926
Alignment:
Q  118 gctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataag 214  Q
    ||||||||||||||| |||||||||| |||||||||||||| | ||||   ||| || |||||| ||||||||||||| |||| |||  ||||||||    
T  34055022 gctatttctataacaaaagataaaataaaggcaaactgtttacatatatgatataaggtgttttcataagctatcctatagagcttagtgaaataag 34054926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 42419968 - 42420063
Alignment:
Q  140 aaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacat 235  Q
    |||||||||| ||||||||| ||||||||||| || | |||| ||||||||||||  | || |||||||||| ||| |||||||| |||| |||||    
T  42419968 aaatcaaggcgaactgtttttgtataatctataagctattttcataagctatcctggatagcttatggaaatgagctgaaaacaatttatgaacat 42420063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 229
Target Start/End: Original strand, 43141836 - 43141931
Alignment:
Q  134 aagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    |||||||| | ||| |||| ||||| | ||||| |||| || |||||| |||||||||||| ||||||||||||||||||   |||||||||||||    
T  43141836 aagataaagtaaagtcaaattgtttccatataagctataagatgttttcataagctatcctgaagagtttatggaaataaaatgaaaacaacttat 43141931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 230
Target Start/End: Complemental strand, 656900 - 656786
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||||||||||| ||||||||||  |  |||| ||||||||||||| || | ||||| ||| |||||||||| |  |||| ||||| |||||||     
T  656900 aagctatttctataacaaaagataaaatataatcaaattgttttcgtataagctgtaagttgatttcataagctatcttgcagagcttatgaaaataaga 656801  T
Q  216 cgaaaacaacttata 230  Q
     |||||| |||||||    
T  656800 tgaaaactacttata 656786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 7103590 - 7103492
Alignment:
Q  132 acaagataaaatcaaggcaaactgttttcgtataatctattagttgttttt-ataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    |||||||||||| ||| |||||||||||  ||||| |||| || ||||||| |||||||||| || ||||||| || ||||||||  ||||||||||||    
T  7103590 acaagataaaataaagtcaaactgttttaatataagctataagctgtttttcataagctatcttagagagtttgtgaaaataagctaaaaacaacttat 7103492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 17952824 - 17952746
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcct 194  Q
    ||||||||||||||||| |||||||||| ||| |||||| ||||| ||||| |||  || |||||| ||||||||||||    
T  17952824 aagctatttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataagctatcct 17952746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 247
Target Start/End: Original strand, 33942099 - 33942228
Alignment:
Q  117 agctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagcc 216  Q
    ||||||||||| | || |||||||||| ||| |||||||||||| | ||| |||| ||||||||| |||||| ||| || |||| | ||| |||| |||     
T  33942099 agctatttcta-atcaaaagataaaataaagtcaaactgttttcatgtaagctataagttgttttcataagccatcatagagagctaatgaaaattagct 33942197  T
Q  217 gaaaacaacttataaacatttcataaattgt 247  Q
    ||||||| ||||| ||||| |||||| ||||    
T  33942198 gaaaacagcttatgaacatgtcataagttgt 33942228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 35486536 - 35486390
Alignment:
Q  66 gtttggataaacagtttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtata 165  Q
    |||||||||||||| |||||||| | | ||||| | || |  | ||||  |||||||||||||| || ||| |||| | ||| ||||||||||| |||||    
T  35486536 gtttggataaacagcttattttgtagcttatagtagaagcgtttatgagtaagctatttctatagcagaaggtaaagtaaagtcaaactgtttttgtata 35486437  T
Q  166 atctattagttgtttttataagctatcctaaagagtttatggaaata 212  Q
    |||||| || ||||||   ||||||||||  |||| |||||||||||    
T  35486436 atctataagctgttttcgcaagctatcctggagaggttatggaaata 35486390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 43299525 - 43299451
Alignment:
Q  117 agctatttctataacacaagataaaatcaaggcaaactgttttcgtat-aatctattagttgtttttataagcta 190  Q
    |||||||| ||||||| |||||||||| ||| ||||||||||| |||| ||||||| ||||||||| ||||||||    
T  43299525 agctatttatataacagaagataaaataaagtcaaactgtttttgtataaatctataagttgttttcataagcta 43299451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 28677701 - 28677640
Alignment:
Q  197 agagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
    |||| |||||||||||||||||||||||||||| || || ||||||  ||||||||||||||    
T  28677701 agagcttatggaaataagccgaaaacaacttatgaaaatgtcataagctgttttcataagtt 28677640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 225
Target Start/End: Original strand, 32694159 - 32694268
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||||||| || |||||||||| ||  || ||| ||||  |||||| ||| ||||||||  ||||||||||||| | || || |||||||||||    
T  32694159 aagctatttctatatcaaaagataaaataaaatcagactatttttatataatttataagttgtttgcataagctatcctagatagattgtggaaataagc 32694258  T
Q  216 cgaaaacaac 225  Q
     |||||||||    
T  32694259 tgaaaacaac 32694268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 256
Target Start/End: Original strand, 33256694 - 33256827
Alignment:
Q  123 ttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaac 222  Q
    ||||||||||  ||||||||| ||| |||||||||||| ||||| |||| ||  ||||| |||||| ||||| ||||   |||| |||||||| || |||    
T  33256694 ttctataacaatagataaaataaagtcaaactgttttcatataaactataagcagttttcataagccatcctgaagaccgtatgaaaataagctgagaac 33256793  T
Q  223 aacttataaacatttcataaattgttttcataag 256  Q
    |  |||| ||||| ||||||  ||||||||||||    
T  33256794 agtttatgaacatgtcataagctgttttcataag 33256827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 213
Target Start/End: Complemental strand, 4085293 - 4085226
Alignment:
Q  145 aaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataa 213  Q
    ||||||||||||||| ||| ||||| | ||||||||| ||||||||||| | |||||||||||||||||    
T  4085293 aaggcaaactgtttttgtacaatct-taagttgttttcataagctatcccacagagtttatggaaataa 4085226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 116 - 256
Target Start/End: Original strand, 28933771 - 28933910
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||| ||||||| |||||||||||||  |||| | ||||| | |||  ||| | ||||||| ||||||||||||| |||| | || ||||||||     
T  28933771 aagctatttatataacaaaagataaaatcaaatcaaattattttcatttaagttataaattgttttcataagctatcctagagagctgatagaaataagt 28933870  T
Q  216 cgaaaacaacttataaacatttcataaattgttttcataag 256  Q
     ||||||| | ||| |||||  ||||| |||||||||||||    
T  28933871 tgaaaacagc-tatgaacatgccataagttgttttcataag 28933910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 5133719 - 5133858
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||||||||||| |||||||||| |||  ||||||||||  |||||  ||| || |||||| | ||| ||||  | |||| ||||||||||||||    
T  5133719 aagctatttctataacaaaagataaaataaagataaactgtttttatataagatataagctgttttcaaaagttatctaagagagcttatggaaataagc 5133818  T
Q  216 cgaaaacaacttataaacatttcataaattgttttcataa 255  Q
     ||||  | ||||| | ||| |||||| ||||||| ||||    
T  5133819 tgaaagtagcttatgaccatgtcataagttgtttttataa 5133858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 16785414 - 16785331
Alignment:
Q  173 agttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    ||||||||| ||||| |||||| ||||||||||||| |||| | ||||||| |||||| || | ||||||| ||||| ||||||    
T  16785414 agttgttttcataagatatcctgaagagtttatggagataatctgaaaacagcttatagacttctcataaactgtttccataag 16785331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 22681304 - 22681189
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    ||||| || |||| |||||||||  ||| |||| ||||||| ||||| |||| || |||||| |||| |||||||| |||  ||||||||||||||  ||    
T  22681304 tatttttaaaacaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaa 22681205  T
Q  220 aacaacttataaacat 235  Q
    |||| ||||| |||||    
T  22681204 aacagcttatgaacat 22681189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 23143101 - 23143030
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataag 187  Q
    ||||||||| | ||||| |||||||||||||  |||| ||||||| ||||| |||||||||||||| |||||    
T  23143101 aagctatttttgtaacaaaagataaaatcaaatcaaattgttttcttataagctattagttgttttcataag 23143030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 23554891 - 23554820
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataag 187  Q
    ||||||||| | ||||| |||||||||||||  |||| ||||||| ||||| |||||||||||||| |||||    
T  23554891 aagctatttttgtaacaaaagataaaatcaaatcaaattgttttcttataagctattagttgttttcataag 23554820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 255
Target Start/End: Complemental strand, 42817495 - 42817360
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    |||||||||| || |||||||||| ||| ||| |||||||| |||||   || |  |||||| ||||||||| || ||||| |||||||| |||||  ||    
T  42817495 tatttctataccaaaagataaaatgaagtcaagctgttttcatataagtaataaactgttttcataagctattctgaagagcttatggaagtaagctaaa 42817396  T
Q  220 aacaacttataaacatttcataaattgttttcataa 255  Q
    |||||||||  |||||  | ||| ||||||||||||    
T  42817395 aacaacttaagaacatgccgtaagttgttttcataa 42817360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 45314900 - 45314967
Alignment:
Q  201 tttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaatc 268  Q
    |||||| |||||| | |||||||||||||||| || |||||| |||||| |||||||| |||||||||    
T  45314900 tttatgaaaataaactgaaaacaacttataaatatgtcataagttgtttacataagttctctcaaatc 45314967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 6988068 - 6988170
Alignment:
Q  122 tttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaa 221  Q
    ||||||||||| |||||||||| ||| |||| | ||||| ||  |  ||| ||||||||| |||||||||| | |||||||||| ||||||||  |||||    
T  6988068 tttctataacaaaagataaaataaagtcaaattattttcttactagttataagttgttttcataagctatcttgaagagtttatagaaataagatgaaaa 6988167  T
Q  222 caa 224  Q
    |||    
T  6988168 caa 6988170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 226
Target Start/End: Complemental strand, 13630400 - 13630294
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    ||||||| || || ||||||| || ||| |||||||||||| ||||||| || |||||||||  ||| |||||||  ||||||||||  ||||||  |||    
T  13630400 tatttctctatcaaaagataagataaagtcaaactgttttcatataatcaataagttgttttcctaatctatccttgagagtttatgacaataagttgaa 13630301  T
Q  220 aacaact 226  Q
    |||||||    
T  13630300 aacaact 13630294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 29316898 - 29316772
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||| ||| ||||| |||||||||| | |  ||| |||||||  ||||||||| || |||||| || ||||||| |  |||  ||||||||||||||    
T  29316898 aagctatatctttaacagaagataaaataaggttaaattgttttcacataatctataagctgttttcatcagctatcttggagaacttatggaaataagc 29316799  T
Q  216 cgaaaacaacttataaacatttcataa 242  Q
     ||||| ||||||| ||||| ||||||    
T  29316798 tgaaaagaacttatgaacatgtcataa 29316772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 258
Target Start/End: Complemental strand, 43530250 - 43530092
Alignment:
Q  100 ataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaaga 199  Q
    |||| |||| ||||| ||||||||||||||  |||||||||||| ||| ||||||| || |||||| || || ||  ||| | ||||| || |||||  |    
T  43530250 ataagcacttatgaataagctatttctataggacaagataaaataaagtcaaactgcttccgtatactcaataagcagttgtcataagttaacctaatca 43530151  T
Q  200 gtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
    |  ||||||||||||  ||||| | ||| | ||||| ||||||  ||||||||||||||    
T  43530150 gcctatggaaataagttgaaaatagcttgtgaacatgtcataatctgttttcataagtt 43530092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 255
Target Start/End: Original strand, 680488 - 680589
Alignment:
Q  154 tgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcat 253  Q
    ||||||||||||| |||| || | |||| |||||||||| | ||||  || || |||||||| |||||||  |||||||||| ||||||  |||||||||    
T  680488 tgttttcgtataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaacagtttataaacatgtcataagctgttttcat 680587  T
Q  254 aa 255  Q
    ||    
T  680588 aa 680589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 1742152 - 1742015
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccga 218  Q
    |||||||||||||| || ||||||| ||| |||||| |||   |||||  ||| || |||||| |||| ||||| | |||||||||||||||||||  ||    
T  1742152 ctatttctataacaaaatataaaatgaagtcaaactctttatatataagatataagctgttttcataatctatcatgaagagtttatggaaataagttga 1742053  T
Q  219 aaacaacttataaacatttcataaattgttttcataag 256  Q
    | | | |||||  |||| |||||| |||||| ||||||    
T  1742052 agatagcttatgcacatgtcataagttgtttccataag 1742015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 1810667 - 1810716
Alignment:
Q  172 tagttgtttttataagctatcctaaagagtttatggaaataagccgaaaa 221  Q
    ||||||||||||||||||||| | ||||||||||| |||||||| |||||    
T  1810667 tagttgtttttataagctatcttgaagagtttatgaaaataagctgaaaa 1810716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 255
Target Start/End: Complemental strand, 28039505 - 28039316
Alignment:
Q  66 gtttggataaacagtttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtata 165  Q
    |||||||||||||  ||| ||||||   |||||||||| | |  ||||| |||||||||   | |||||||||||||| ||| | || ||||||| ||||    
T  28039505 gtttggataaacaacttaatttgcagtttatagcataagcgcatatgaataagctattttggttacacaagataaaataaagtccaattgttttcatata 28039406  T
Q  166 atctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataa 255  Q
    | |||| ||   |||| ||||||| || |  | |  |||||||||||||| ||||||| ||||| ||||  |||||| ||||||||||||    
T  28039405 aactataagcaattttcataagctttcttggaaaagttatggaaataagctgaaaacagcttatgaacaagtcataacttgttttcataa 28039316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 32821816 - 32821889
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttt 249  Q
    |||||| |||||||||||||||||| |||| ||||||| | ||||||| |||||  |||| |||||| ||||||    
T  32821816 tgttttcataagctatcctaaagagcttatagaaataaactgaaaacagcttatggacatgtcataagttgttt 32821889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 37292457 - 37292380
Alignment:
Q  129 aacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatg 206  Q
    |||| |||||||||| |||  ||||| ||||| ||||| ||||||||||||||  |||||||||||  ||||||||||    
T  37292457 aacaaaagataaaataaagtaaaactattttcatataagctattagttgttttcttaagctatcctggagagtttatg 37292380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 1647249 - 1647325
Alignment:
Q  182 tataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
    ||||||||||  || |||| |||||||||||||| ||||||| ||||| | ||| ||||||  ||||||||||||||    
T  1647249 tataagctattatagagagcttatggaaataagctgaaaacagcttatgagcatgtcataagctgttttcataagtt 1647325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 10198543 - 10198479
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcat 240  Q
    ||||||||||| |||||||| |||| |||||||||||||| || |||| ||||| ||||| ||||    
T  10198543 tgtttttataatctatcctagagagattatggaaataagctgacaacagcttatgaacatgtcat 10198479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 31740083 - 31740019
Alignment:
Q  115 aaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtt 179  Q
    |||||||||||||||||  |||||||||| ||| |||||| ||||| ||||| |||| |||||||    
T  31740083 aaagctatttctataactaaagataaaataaagtcaaactattttcatataagctataagttgtt 31740019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 33192138 - 33192190
Alignment:
Q  114 aaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataa 166  Q
    |||| |||||||||||||| |||||||||| ||| |||||||||||| |||||    
T  33192138 aaaaactatttctataacataagataaaataaagtcaaactgttttcatataa 33192190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 3059365 - 3059290
Alignment:
Q  149 caaactgttttcgtataatctatt-agttgtttttataagctatcctaaagagtttatggaaataagccgaaaaca 223  Q
    |||||||||||| ||||| ||  | ||||||||| ||||||||| ||| ||||||||||||||||| | |||||||    
T  3059365 caaactgttttcatataaacttgtgagttgttttcataagctatgctagagagtttatggaaataaactgaaaaca 3059290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 195
Target Start/End: Complemental strand, 6887426 - 6887306
Alignment:
Q  74 aaacagtttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataa-tctatt 172  Q
    ||||||||||||||||| | ||||  |||| | || ||||| ||||||||||  ||||||||||||| || ||| ||||| | ||| ||||||  ||||     
T  6887426 aaacagtttattttgcagcttatataataagcgcttatgaataagctatttc--taacacaagataagataaagtcaaacggcttttgtataaccctata 6887329  T
Q  173 agttgtttttataagctatccta 195  Q
    ||||||||| ||||| |||||||    
T  6887328 agttgttttcataagttatccta 6887306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 121 - 256
Target Start/End: Original strand, 10285813 - 10285947
Alignment:
Q  121 atttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaa 220  Q
    ||||||||| || |||| ||||| ||| ||||||| |||| ||||| |||| ||| ||||  |||||||| | || |||  |||||||||||||  ||||    
T  10285813 atttctataccaaaagaaaaaat-aagtcaaactggtttcatataagctataagtcgtttgcataagctaacatagagaacttatggaaataagttgaaa 10285911  T
Q  221 acaacttataaacatttcataaattgttttcataag 256  Q
    ||| |||||  |||| |||||| || ||||||||||    
T  10285912 acagcttatggacatgtcataagttattttcataag 10285947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 13866839 - 13866914
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcct 194  Q
    ||||||||||| || |||||||||| ||| |||||||||||  |||||||||| || | |||| || |||||||||    
T  13866839 ctatttctatagcaaaagataaaattaagtcaaactgtttttatataatctataagctcttttcattagctatcct 13866914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 25609743 - 25609810
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgttttta 183  Q
    ||||||||||||||| | |||||||||| ||| |||  | ||||||||||| |||| |||||||||||    
T  25609743 aagctatttctataagaaaagataaaataaagtcaatttattttcgtataagctataagttgttttta 25609810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 232
Target Start/End: Original strand, 27288586 - 27288694
Alignment:
Q  122 tttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaa 221  Q
    ||||||||| | |||||||||| ||  ||||||||||   ||||| |||| |  |||||| ||||| |||| |  |||||||| |||||||||| |||||    
T  27288586 tttctataataaaagataaaataaaatcaaactgttta--tataagctatgatctgttttcataagttatcatgtagagtttacggaaataagctgaaaa 27288683  T
Q  222 caacttataaa 232  Q
    |||||||||||    
T  27288684 caacttataaa 27288694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 40808319 - 40808268
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctat 171  Q
    ||||||||| |||||||||||||| ||| |||| |||||| |||||||||||    
T  40808319 tatttctattacacaagataaaataaagtcaaattgtttttgtataatctat 40808268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 43065516 - 43065433
Alignment:
Q  173 agttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    ||||||||| ||||| |||| |  |||| |||| ||||||||| |||||||| ||||  |||| |||||| |||||||||||||    
T  43065516 agttgttttcataagttatcgtggagagcttattgaaataagctgaaaacaatttatggacatgtcataagttgttttcataag 43065433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 120 - 191
Target Start/End: Complemental strand, 44439479 - 44439408
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctat 191  Q
    |||||| |||||| || ||||||| |||  |||||||||| |||||| |||| | |||||||||||||||||    
T  44439479 tatttccataacaaaatataaaataaagttaaactgtttttgtataagctataaattgtttttataagctat 44439408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 5043665 - 5043607
Alignment:
Q  134 aagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatc 192  Q
    |||||||||| ||| |||||||||||| ||||| |||  ||||||||| ||||||||||    
T  5043665 aagataaaataaagtcaaactgttttcatataagctagaagttgttttcataagctatc 5043607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 256
Target Start/End: Original strand, 11488291 - 11488362
Alignment:
Q  183 ataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    ||||||||||||  |||| ||||| |||||||| ||||||||||||| | ||  |||||| |||||||||||||    
T  11488291 ataagctatcctggagagattatgcaaataagctgaaaacaacttatgacca--tcataagttgttttcataag 11488362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 235
Target Start/End: Complemental strand, 41032997 - 41032959
Alignment:
Q  197 agagtttatggaaataagccgaaaacaacttataaacat 235  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  41032997 agagtttatggaaataagctgaaaacaacttatagacat 41032959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 41809305 - 41809235
Alignment:
Q  179 ttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttt 249  Q
    ||||| |||||||| || | || ||||||||||||||  |||||||||||| ||||| |||||| ||||||    
T  41809305 ttttacaagctatcttagaaagcttatggaaataagctaaaaacaacttatgaacatgtcataagttgttt 41809235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 626340 - 626243
Alignment:
Q  110 atgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatgg 207  Q
    ||||| |||||||||||| |||||||||||||||  || |||| || ||| ||| ||||| | |||| |||| |||||| |||||  |||| ||||||    
T  626340 atgaataagctatttctagaacacaagataaaatatagtcaaaatggttttgtacaatctctaagttattttaataagcaatcctgtagagcttatgg 626243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 1741574 - 1741529
Alignment:
Q  179 ttttataagctatcctaaagagtttatggaaataagccgaaaacaa 224  Q
    ||||||||  |||||| |||||||||||||||||||| ||||||||    
T  1741574 ttttataatttatcctgaagagtttatggaaataagctgaaaacaa 1741529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 3973548 - 3973589
Alignment:
Q  182 tataagctatcctaaagagtttatggaaataagccgaaaaca 223  Q
    ||||||||||||||  |||||||||||||||||| |||||||    
T  3973548 tataagctatcctagggagtttatggaaataagctgaaaaca 3973589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 258
Target Start/End: Complemental strand, 35378614 - 35378513
Alignment:
Q  157 tttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    |||||||||||||||||| ||||||  ||||| ||| |  | || ||||| |||||||| ||||| ||||||| ||||  |||| |  ||||||||||||    
T  35378614 tttcgtataatctattagctgttttcgtaagcaatcttggatagcttatgaaaataagctgaaaataacttatgaacaagtcatcagctgttttcataag 35378515  T
Q  257 tt 258  Q
    ||    
T  35378514 tt 35378513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 37053544 - 37053617
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatc 192  Q
    |||||||||||||| || ||||||| ||| |||||||||||| |||||  ||| |||| |||| || |||||||    
T  37053544 ctatttctataacagaaaataaaataaagtcaaactgttttcatataagttataagtttttttcattagctatc 37053617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 42907306 - 42907371
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttt 181  Q
    ||||||||||||||||| |||| ||||| |||  ||| ||||||||| ||| |||| |||||||||    
T  42907306 aagctatttctataacagaagaaaaaataaagttaaattgttttcgtttaagctataagttgtttt 42907371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 43985086 - 43985021
Alignment:
Q  156 ttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaa 221  Q
    |||||||||||  ||| ||||||||| |||||||||| | ||||| ||||| |||||||| |||||    
T  43985086 ttttcgtataaattataagttgttttcataagctatcttgaagagcttatgaaaataagctgaaaa 43985021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 44443330 - 44443395
Alignment:
Q  178 tttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaa 243  Q
    |||| |||||||||| |  ||||  |||| |||||||| ||||||||||||| |||||||||||||    
T  44443330 ttttcataagctatctttgagagcatatgaaaataagctgaaaacaacttatgaacatttcataaa 44443395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 256
Target Start/End: Complemental strand, 3067442 - 3067362
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    |||||| |||||||||| | ||||||||||| ||||||||  |||||  |||||| |||| | ||||  ||||||||||||    
T  3067442 tgttttcataagctatcttgaagagtttatgaaaataagctaaaaacggcttatatacatattataagctgttttcataag 3067362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 3235504 - 3235394
Alignment:
Q  117 agctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagcc 216  Q
    |||||||| ||||||| | || ||||| ||| |||||||||| | ||||| |||| || |||||| |||  ||||| | || |||||||||||||||||     
T  3235504 agctatttttataacaaatga-aaaataaagtcaaactgttt-catataaactataagctgttttcatatactatcttgaaaagtttatggaaataagct 3235407  T
Q  217 gaaaacaacttat 229  Q
    ||||||| |||||    
T  3235406 gaaaacagcttat 3235394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 14209224 - 14209280
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctatt 172  Q
    |||||||||| |||||| |||||||||| ||  |||||||||||| ||||| |||||    
T  14209224 aagctatttcaataacaaaagataaaataaattcaaactgttttcatataagctatt 14209280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 213
Target Start/End: Complemental strand, 18962160 - 18962064
Alignment:
Q  117 agctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataa 213  Q
    |||||||| ||||||| |||||||||| |||  ||||||||||| ||||| |||| |  | |||| |||||||||| |  ||||  |||||||||||    
T  18962160 agctatttttataacaaaagataaaataaagttaaactgttttcatataagctataaactattttcataagctatcatggagagactatggaaataa 18962064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 214
Target Start/End: Original strand, 29300594 - 29300690
Alignment:
Q  118 gctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataag 214  Q
    |||||||||| || | |||||||||| ||||  || ||||||| | |||  ||| ||||||||| |||||||||||| ||  | |||||||||||||    
T  29300594 gctatttctacaataaaagataaaataaaggtgaattgttttcatgtaagttataagttgttttcataagctatccttaaatgcttatggaaataag 29300690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 29628828 - 29628748
Alignment:
Q  154 tgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaaca 234  Q
    |||||| |||||| |||| ||||||| | |||||||||| |  | | ||||||||||||||| |||||||| |||| ||||    
T  29628828 tgtttttgtataagctataagttgttctcataagctatcttggaaaatttatggaaataagctgaaaacaatttatgaaca 29628748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 31228879 - 31228827
Alignment:
Q  197 agagtttatggaaataagccgaaaacaacttataaacatttcataaattgttt 249  Q
    ||||||||||||||||| |  |||||| |||||| |||| |||||||||||||    
T  31228879 agagtttatggaaataacctaaaaacagcttatatacatgtcataaattgttt 31228827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 32098431 - 32098387
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttc 160  Q
    ||||||||||||||||| |||||||||| ||| |||| |||||||    
T  32098431 aagctatttctataacaaaagataaaataaagtcaaagtgttttc 32098387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 33931698 - 33931618
Alignment:
Q  111 tgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctat 191  Q
    |||| ||||||||||||| |||| ||||||||| | | || | |||||| |||||| |||| || |||||| |||||||||    
T  33931698 tgaataagctatttctattacactagataaaataaggtcagattgtttttgtataagctataagctgttttcataagctat 33931618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 258
Target Start/End: Original strand, 33941894 - 33941998
Alignment:
Q  154 tgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcat 253  Q
    |||||| ||||||  ||| | ||||||| |||||||||| |  ||||||||||  ||||||  |||| || ||||| ||| | |||||| ||||||||||    
T  33941894 tgtttttgtataagttataacttgttttcataagctatcttggagagtttatgataataagttgaaagcagcttatgaacttgtcataagttgttttcat 33941993  T
Q  254 aagtt 258  Q
    |||||    
T  33941994 aagtt 33941998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 34101983 - 34102043
Alignment:
Q  135 agataaaatcaaggcaaac-tgttttcgtataatctattagttgtttttataagctatcct 194  Q
    ||||||||| ||| ||||| | |||| ||||||  ||||||||||||||||||||||||||    
T  34101983 agataaaataaagtcaaacgtttttttgtataagttattagttgtttttataagctatcct 34102043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 256
Target Start/End: Complemental strand, 35379079 - 35378999
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    |||||| |||||||||| |  |||| ||||| |||||||| ||||||||||||| ||||  |||| |  ||||||||||||    
T  35379079 tgttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaacaagtcatcagctgttttcataag 35378999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 38239674 - 38239638
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaa 152  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  38239674 aagctatttctataacaaaagataaaatcaagtcaaa 38239638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 43569773 - 43569809
Alignment:
Q  202 ttatggaaataagccgaaaacaacttataaacatttc 238  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  43569773 ttatggaaataagccaaaaacaacttatcaacatttc 43569809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 252
Target Start/End: Complemental strand, 44438962 - 44438826
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||||  || || |||||||||| ||| ||||||||||| ||| || | || || ||| || ||||| ||||||  |||  || |||||||||||    
T  44438962 aagctatttccgtagcaaaagataaaataaagtcaaactgtttttgtacaagccataagctgtcttcataagttatcctggagatcttgtggaaataagc 44438863  T
Q  216 cgaaaacaacttataaacatttcataaattgttttca 252  Q
     |||||||  |||| ||||| ||||||  ||||||||    
T  44438862 tgaaaacaggttatgaacatgtcataagctgttttca 44438826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 44606147 - 44606091
Alignment:
Q  202 ttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
    ||||| |||| ||| |||||||||||||  |||| |||||| |||||||||||||||    
T  44606147 ttatgaaaatcagctgaaaacaacttatggacatgtcataagttgttttcataagtt 44606091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 116 - 263
Target Start/End: Original strand, 17368623 - 17368770
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||| ||||||||  || |||| ||| ||||||||||| || |||||||| ||||||||| |||||||||| |  |||| ||||||||||||||    
T  17368623 aagctatttcaataacacagtattaaatgaagtcaaactgtttttgtgtaatctataagttgttttcataagctatcttggagaggttatggaaataagc 17368722  T
Q  216 cgaaaacaacttataaacatttcataaattgttttcataagttttctc 263  Q
     ||||||  | ||| ||||| |||||| ||||||||||||||| ||||    
T  17368723 tgaaaactgcatatgaacatgtcataagttgttttcataagttctctc 17368770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 37588485 - 37588333
Alignment:
Q  114 aaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataa 213  Q
    ||||| ||||||||||| | |||||||||||||  ||||  |||||| ||||| |||| ||||||||| ||||| ||| ||  |||| ||||||||||||    
T  37588485 aaaagttatttctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttattctggagagcttatggaaataa 37588386  T
Q  214 gccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    || ||||||| ||||| |||||||||||  |||| |||||||| | |||||||    
T  37588385 gctgaaaacagcttattaacatttcataggttgtattcataagctctctcaaa 37588333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 134 - 249
Target Start/End: Complemental strand, 10272536 - 10272421
Alignment:
Q  134 aagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaac 233  Q
    |||||||||| ||| |||| ||||||||||||| |||| ||||||||| |||||| ||| |  |||||||||| |||||||| |||||||||||| | ||    
T  10272536 aagataaaattaagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaacaacttacagac 10272437  T
Q  234 atttcataaattgttt 249  Q
    || |||||| ||||||    
T  10272436 atgtcataagttgttt 10272421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 14295454 - 14295593
Alignment:
Q  117 agctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagcc 216  Q
    |||||||||||||||| |||||||||| ||| |||||||||||| ||||| |||| || ||||||  |||||||||||  |||| || | ||| |||||     
T  14295454 agctatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatcctggagagcttttagaagtaagct 14295553  T
Q  217 gaaaacaacttataaacatttcataaattgttttcataag 256  Q
    ||||||| |||||  |||| ||||||  ||||||||||||    
T  14295554 gaaaacagcttatcgacatatcataagctgttttcataag 14295593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 16889682 - 16889821
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||| |||||| |||||||| | ||| |||||||||||  || || |||| || |||||| ||||||||| ||| ||||||||||||||||| |    
T  16889682 aagctatttccataacaaaagataaacttaagtcaaactgtttttatagaagctataagctgttttcataagctatgctagagagtttatggaaataatc 16889781  T
Q  216 cgaaaacaacttataaacatttcataaattgttttcataa 255  Q
     |||||||||||||| ||||   ||||  |||||||||||    
T  16889782 tgaaaacaacttatagacatagtataagctgttttcataa 16889821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 37526324 - 37526172
Alignment:
Q  114 aaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataa 213  Q
    ||||| ||||||||||| | |||||||||||||  ||||  |||||| ||||| |||| ||||||||| ||||| | | ||  |||| ||||||||||||    
T  37526324 aaaagttatttctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttgttctggagagcttatggaaataa 37526225  T
Q  214 gccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    || ||||||| ||||| ||||| |||||  |||| |||||||| | |||||||    
T  37526224 gctgaaaacagcttattaacatgtcataggttgtattcataagctctctcaaa 37526172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 2880624 - 2880546
Alignment:
Q  162 tataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcat 240  Q
    |||||||||| ||||||||||||||||||| |  |||||||||||||||||||| ||||||| ||||| ||||| ||||    
T  2880624 tataatctataagttgtttttataagctattcagaagagtttatggaaataagctgaaaacaccttatgaacatatcat 2880546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 114 - 256
Target Start/End: Complemental strand, 37794822 - 37794681
Alignment:
Q  114 aaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataa 213  Q
    ||||||||||||||| | | |||||||||| ||  |||||||||| ||||||| ||||   || |||| || |||||||||| |||| |||| |||||||    
T  37794822 aaaagctatttctattataaaagataaaatgaaatcaaactgtttacgtataagctatagattattttcatgagctatcctatagag-ttatcgaaataa 37794724  T
Q  214 gccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    ||  |||||| ||||| ||||| |||||| |||||||||||||    
T  37794723 gctcaaaacagcttatgaacatgtcataagttgttttcataag 37794681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 228
Target Start/End: Complemental strand, 28586886 - 28586777
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccga 218  Q
    |||||||||||||| |||||||||| ||| |||||||||||| |||||  ||| || |||||| |  |||||||||| |||| |||| ||||||||| ||    
T  28586886 ctatttctataacaaaagataaaataaagtcaaactgttttcatataaattataagctgttttgacgagctatcctagagagcttatcgaaataagctga 28586787  T
Q  219 aaacaactta 228  Q
    ||||| ||||    
T  28586786 aaacagctta 28586777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 66 - 264
Target Start/End: Complemental strand, 10125892 - 10125693
Alignment:
Q  66 gtttggataaacagtttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtata 165  Q
    |||||||||||||| |||| ||||||  ||||||||||    | ||||| |||||||||||||| |||||||||| || |||   || |  |||| ||||    
T  10125892 gtttggataaacagcttatattgcaagttatagcataactgattatgaataagctatttctatatcacaagataagataaagttgaattcctttcttata 10125793  T
Q  166 atctatt-agttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctca 264  Q
    | ||||| |||| |||| ||||| || | |  |||| ||||| |||||||| ||||||| ||||| ||||| |||||| |||||| |||||||| |||||    
T  10125792 aactattaagttattttcataagttaccatggagagcttatgaaaataagctgaaaacaccttatcaacatgtcataagttgtttacataagttctctca 10125693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 258
Target Start/End: Original strand, 7674595 - 7674737
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||||||| || |||||||||| ||   ||| ||||||| ||||| | || |  |||||| |||||||||| |  ||| ||| || ||||||||    
T  7674595 aagctatttctataccaaaagataaaataaatttaaattgttttcttataagccataaaatgttttcataagctatcttggagaatttgtgaaaataagc 7674694  T
Q  216 cgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
     ||||||| ||||||||||| |||||| |||||| ||||||||    
T  7674695 tgaaaacaccttataaacatgtcataagttgtttccataagtt 7674737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 12460123 - 12459986
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||||||||||| |||||||||| |||  | | |||||||  |||| |||| |||||| || | |||||||| |  |||| ||||| ||||||||    
T  12460123 aagctatttctataacaaaagataaaat-aagttatattgttttcaaataaactataagttgtcttcacaagctatcttgcagagcttatgaaaataagc 12460025  T
Q  216 cgaaaacaacttataaacatttcataaattgttttcata 254  Q
    | |||||||| ||| ||||| |||||| |||||||||||    
T  12460024 caaaaacaacatatgaacatgtcataagttgttttcata 12459986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 81 - 258
Target Start/End: Original strand, 9106737 - 9106911
Alignment:
Q  81 ttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgttt 180  Q
    |||||||||| | || ||||||| || | ||||| |||| ||||||||||| ||||||||    ||| ||||||||||| ||||||||||| || | |||    
T  9106737 ttattttgcagcttaaagcataagcatttatgaataagcaatttctataacccaagataa----aagtcaaactgtttttgtataatctataagctattt 9106832  T
Q  181 ttataagctatcctaaagagtttatggaaataagccgaaaacaacttat-aaacatttcataaattgttttcataagtt 258  Q
    | ||||| ||||||    || |||||||||||||| ||||||| ||||| ||| |  | |||| |||||||||||||||    
T  9106833 tcataagttatcctgctaagcttatggaaataagctgaaaacagcttatgaaatacattataagttgttttcataagtt 9106911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 120 - 249
Target Start/End: Complemental strand, 18704154 - 18704026
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    ||||||||||||| |||||||| | ||| ||| || ||||  ||||| |||| ||||||||| |||||||||   |||||  |||||||||||||| |||    
T  18704154 tatttctataacaaaagataaa-taaagtcaagctatttttatataagctataagttgttttcataagctattacaaagatcttatggaaataagctgaa 18704056  T
Q  220 aacaacttataaacatttcataaattgttt 249  Q
    ||||||||||| |||| | |||| ||||||    
T  18704055 aacaacttatagacatgttataagttgttt 18704026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 37690762 - 37690609
Alignment:
Q  114 aaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataa-gctatcctaaagagtttatggaaata 212  Q
    ||||| ||||||||||| | |||||||||||||  ||||  |||||| ||||| |||| ||||||||| |||| | |||  |  |||| |||||||||||    
T  37690762 aaaagttatttctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataaagttattatggagagcttatggaaata 37690663  T
Q  213 agccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    ||| ||||||| ||||| ||||| |||||  |||| |||||||| | |||||||    
T  37690662 agctgaaaacagcttattaacatgtcataggttgtattcataagctctctcaaa 37690609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 256
Target Start/End: Original strand, 10907367 - 10907465
Alignment:
Q  157 tttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    |||| |||||||||| || |||||||||||| |||| ||| || ||| ||||||||||||||||||| |||||  ||||  ||||| |||||||||||||    
T  10907367 tttcatataatctataagctgtttttataagttatc-taaggaatttgtggaaataagccgaaaacagcttattgacatgacataagttgttttcataag 10907465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 258
Target Start/End: Complemental strand, 15003626 - 15003495
Alignment:
Q  127 ataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaact 226  Q
    |||||| |||||||||| ||  |||||| | ||| ||||| |||| ||| ||||| ||||||||||| | |||| ||||||||||||  |||||||||||    
T  15003626 ataacaaaagataaaataaaatcaaactctcttcatataagctataagtggttttcataagctatccaagagagcttatggaaataaatcgaaaacaact 15003527  T
Q  227 tataaacatttcataaattgttttcataagtt 258  Q
    ||  ||||| || ||| |||||| | ||||||    
T  15003526 tacgaacatgtcgtaagttgtttccttaagtt 15003495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 258
Target Start/End: Original strand, 2468435 - 2468521
Alignment:
Q  173 agttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcat-aaattgttttcataagtt 258  Q
    |||| ||||||||||||||||| |||||||||||||| |||||  |||||| |||||  |||| |||| ||||||||| ||||||||    
T  2468435 agttctttttataagctatcctgaagagtttatggaagtaagctcaaaacagcttatggacatgtcataaaattgtttccataagtt 2468521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 10391334 - 10391428
Alignment:
Q  162 tataatctattagttgtttttataagctatcctaaagag-tttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataa 255  Q
    ||||| |||| | ||||||||||||||||||||| |||| |||| |||||||||  |||||||||| ||| |||| ||||||| |||||| ||||    
T  10391334 tataagctataatttgtttttataagctatcctagagagttttaaggaaataagttgaaaacaactaatagacatgtcataaagtgtttttataa 10391428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 499773 - 499712
Alignment:
Q  197 agagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
    ||||||||||||||||||| ||||||||||| | ||||| ||||||  ||||||||||||||    
T  499773 agagtttatggaaataagctgaaaacaacttgttaacatgtcataagctgttttcataagtt 499712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 242
Target Start/End: Original strand, 4855646 - 4855771
Alignment:
Q  117 agctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagcc 216  Q
    |||||||| ||||||| || ||||||| |||  ||| |||| || |||||  ||| ||||||||| |||| |||||| |||||| |||  ||||||||||    
T  4855646 agctatttttataacaaaaaataaaataaagttaaattgttatcatataagttataagttgttttcataaactatcccaaagagcttacagaaataagcc 4855745  T
Q  217 gaaaacaacttataaacatttcataa 242  Q
    ||||||| ||| | ||||| ||||||    
T  4855746 gaaaacagcttctgaacatgtcataa 4855771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 267
Target Start/End: Original strand, 11707062 - 11707153
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaat 267  Q
    |||||| |||||||||| |  |||| || || |||||||| ||||||||||||||||||| ||||||  | |||| ||||||| ||||||||    
T  11707062 tgttttcataagctatcttgtagagcttttgaaaataagctgaaaacaacttataaacatgtcataatctattttgataagttctctcaaat 11707153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 29117049 - 29116998
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctat 171  Q
    ||||||||||||| |||||||||| ||| |||||||||||||||||| ||||    
T  29117049 tatttctataacaaaagataaaataaagtcaaactgttttcgtataagctat 29116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 266
Target Start/End: Complemental strand, 37611279 - 37611188
Alignment:
Q  175 ttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    ||||||| |||||||||| |  |||| |||||||||||| | ||||||| ||||| ||||| ||| || ||||||||||||| | |||||||    
T  37611279 ttgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaa 37611188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 266
Target Start/End: Complemental strand, 37788009 - 37787918
Alignment:
Q  175 ttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    ||||||| |||||||||| |  |||| |||||||||||| | ||||||| ||||| ||||| ||| || ||||||||||||| | |||||||    
T  37788009 ttgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaa 37787918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 258
Target Start/End: Original strand, 2568645 - 2568747
Alignment:
Q  156 ttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataa 255  Q
    ||||||||||| |||| ||||||||| |||||||||| |  |||| | ||| ||||||||  |||| ||||||| || || ||||||  |||||||||||    
T  2568645 ttttcgtataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataagctgttttcataa 2568744  T
Q  256 gtt 258  Q
    |||    
T  2568745 gtt 2568747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 189
Target Start/End: Complemental strand, 14599450 - 14599353
Alignment:
Q  94 tatagcataaacactaatgaaaaagctatttctataacacaa--gataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagct 189  Q
    ||||||||||||||| |||   ||||||||||||||||| ||  |||||||| ||| |||||||||||| |||||  ||| ||||||||  |||||||    
T  14599450 tatagcataaacacttatgtttaagctatttctataacaaaactgataaaattaagtcaaactgttttcatataagttataagttgtttcgataagct 14599353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 258
Target Start/End: Original strand, 17827523 - 17827613
Alignment:
Q  168 ctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
    |||| |||||||||| ||||||||| || |||| ||| | |||||||| ||||| || |||  |||||||||||| |||||||| ||||||    
T  17827523 ctataagttgtttttgtaagctatcttagagaggttacgaaaataagctgaaaataatttacgaacatttcataagttgttttcctaagtt 17827613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 29588827 - 29588931
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||||||||||| || ||||||| || | ||| ||||||| ||||| |||| |  ||||||  ||||||||  | ||||||||||||||||||||    
T  29588827 aagctatttctataacaaaatataaaat-aatgaaaattgttttcatataagctataaagtgttttcgtaagctatgttgaagagtttatggaaataagc 29588925  T
Q  216 cgaaaa 221  Q
     |||||    
T  29588926 tgaaaa 29588931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 32172603 - 32172740
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccga 218  Q
    ||||||||| |||| |||||||||| ||| |||  ||||| | ||||| |||| || |||||| |||||||||| | ||||  | |||||||||||| ||    
T  32172603 ctatttctacaacaaaagataaaatgaagtcaagttgtttacatataagctataagctgttttcataagctatcatgaagaactaatggaaataagctga 32172702  T
Q  219 aaacaacttataaacatttcataaattgttttcataag 256  Q
    |||   |||||  |||| |||||| |||||| ||||||    
T  32172703 aaatggcttatggacatgtcataagttgtttccataag 32172740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 36539693 - 36539790
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataa 213  Q
    ||||||||| | || || |||||||||| ||| ||| |||||||| ||||| |||| ||||||||||||||| ||| || ||||| || ||| |||||    
T  36539693 aagctatttgtttatcaaaagataaaataaagtcaacctgttttcatataagctataagttgtttttataagttattctgaagagcttttggtaataa 36539790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 42569109 - 42569048
Alignment:
Q  110 atgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctat 171  Q
    |||||||||||||||||||| || |||||||||| ||| | || ||||||||||||| ||||    
T  42569109 atgaaaaagctatttctatagcaaaagataaaataaagtctaattgttttcgtataagctat 42569048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 12595857 - 12595749
Alignment:
Q  122 tttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaa 221  Q
    ||||||||||| |||||||||| |||  ||| ||||||| ||||| |||| || || ||| |||||||| | ||||||| |||| ||||| ||  |||||    
T  12595857 tttctataacaaaagataaaataaagttaaattgttttcatataaactatgagctggtttcataagctaccttaaagagcttatagaaatcagttgaaaa 12595758  T
Q  222 caacttata 230  Q
    || ||||||    
T  12595757 cagcttata 12595749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 38104913 - 38104865
Alignment:
Q  183 ataagctatcctaaagagtttatggaaataagccgaaaacaacttataa 231  Q
    |||||||||| || |||| |||||||||||||| |||||||||||||||    
T  38104913 ataagctatcttagagagcttatggaaataagctgaaaacaacttataa 38104865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 912778 - 912695
Alignment:
Q  110 atgaaaaagctatttctataacacaagataaaatcaaggc-aaactgttttcgtataatctattagttgtttttataagctatc 192  Q
    ||||| ||| |||||||||||||||| ||||||| ||| | ||| ||||||| ||||| | || |||||||||||||| |||||    
T  912778 atgaataagttatttctataacacaatataaaataaagtcaaaattgttttcatataagcaataagttgtttttataaactatc 912695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 255
Target Start/End: Original strand, 36638754 - 36638833
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataa 255  Q
    |||||| ||||| ||||||| |||| |||||||||||||| ||||| | ||||| ||||| ||||| |  ||||||||||    
T  36638754 tgttttcataagttatcctagagagcttatggaaataagctgaaaaaagcttatgaacatgtcatacacagttttcataa 36638833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 215
Target Start/End: Complemental strand, 38831579 - 38831481
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||||| | | | |||||||||| ||| ||||||||||||||||||   || |||||||||| ||||||||| || | || | ||||||||||||    
T  38831579 aagctatttctgttataaaagataaaataaagtcaaactgttttcgtataaatgataagttgttttt-taagctatcatagatagctgatggaaataagc 38831481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 5946762 - 5946704
Alignment:
Q  156 ttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataag 214  Q
    |||||| |||| ||||||||||||||||||||||||||   | || |||||||||||||    
T  5946762 ttttcgaataagctattagttgtttttataagctatccaggaaagcttatggaaataag 5946704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 32408653 - 32408603
Alignment:
Q  178 tttttataagctatcctaaagagtttatggaaataagccgaaaacaactta 228  Q
    |||| |||||||||||| ||||| |||||||||||||| |||| |||||||    
T  32408653 ttttcataagctatcctgaagagcttatggaaataagcagaaaccaactta 32408603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 3237100 - 3237153
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    |||||| |||||||||||||||||| ||||| ||||| || ||| |||||||||    
T  3237100 tgttttcataagctatcctaaagagcttatgaaaatatgctgaacacaacttat 3237153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 226
Target Start/End: Complemental strand, 18543322 - 18543210
Alignment:
Q  114 aaaagctatttctataacacaagataaaatcaaggcaaact-gttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaata 212  Q
    ||||||||||| ||| ||| || || |||| ||| |||||| |||||  |||||  ||| ||||||||| ||||||||||||  |||| |||| ||||||    
T  18543322 aaaagctatttgtatcacaaaatattaaataaagtcaaacttgtttttatataagatataagttgttttcataagctatcctggagagcttat-gaaata 18543224  T
Q  213 agccgaaaacaact 226  Q
    ||| ||||||||||    
T  18543223 agctgaaaacaact 18543210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 28413326 - 28413281
Alignment:
Q  197 agagtttatggaaataagccgaaaacaacttataaacatttcataa 242  Q
    ||||||||||||||||||| ||||||| ||||| |||||| |||||    
T  28413326 agagtttatggaaataagctgaaaacagcttatgaacattccataa 28413281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 30217077 - 30217142
Alignment:
Q  164 taatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    |||||||| || || ||| ||||||||||||  |||| |||||||||||| || ||||||||||||    
T  30217077 taatctataagctgctttcataagctatcctggagagcttatggaaataaacctaaaacaacttat 30217142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 36542404 - 36542307
Alignment:
Q  117 agctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataag 214  Q
    |||||||||||||||| | ||||  |||||  ||||||||| || ||||| |||| || || ||  ||||||||||||| |||| || ||||||||||    
T  36542404 agctatttctataacaaacgatattatcaaatcaaactgttctcatataagctataagctgattccataagctatcctagagagcttgtggaaataag 36542307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 12521541 - 12521601
Alignment:
Q  182 tataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataa 242  Q
    ||||||||||  | ||||| |||||||||||||| ||||||| ||||| ||||| ||||||    
T  12521541 tataagctattttgaagagcttatggaaataagctgaaaacagcttatgaacatatcataa 12521601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 28578839 - 28578883
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttc 160  Q
    ||||||||||||||||| |||||||||| ||| ||| ||||||||    
T  28578839 aagctatttctataacataagataaaataaagtcaagctgttttc 28578883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 35135781 - 35135725
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagtt 176  Q
    ||||||||||||| |||||||||| ||| |||||| ||||| ||||| |||| ||||    
T  35135781 tatttctataacaaaagataaaataaagtcaaactattttcatataagctataagtt 35135725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 36774770 - 36774726
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaa 220  Q
    |||||||||||||||||||  |||| |||||||||||||| ||||    
T  36774770 tgtttttataagctatcctggagagcttatggaaataagctgaaa 36774726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 9e-24; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 116 - 260
Target Start/End: Complemental strand, 20936352 - 20936208
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||| |||||||| |||| |||||| ||| |||| ||||||  ||||||||||  |||||||| |||  |||||||  |||| |||||||||||||     
T  20936352 aagctatatctataacgcaaggtaaaatgaagtcaaattgtttttatataatctataggttgttttcatattctatcctggagagattatggaaataagg 20936253  T
Q  216 cgaaaacaacttataaacatttcataaattgttttcataagtttt 260  Q
     ||||||| ||||| ||||| |||||| |||||||||||||||||    
T  20936252 tgaaaacagcttatgaacatatcataagttgttttcataagtttt 20936208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 120 - 229
Target Start/End: Original strand, 49219090 - 49219199
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    ||||||||||||| || ||||||| ||| |||| | ||||| ||||| |||| ||||||||| |||| ||||| ||||||| |||||||||||||| |||    
T  49219090 tatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactatcttaaagagattatggaaataagctgaa 49219189  T
Q  220 aacaacttat 229  Q
    ||||||||||    
T  49219190 aacaacttat 49219199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 250
Target Start/End: Complemental strand, 6466219 - 6466035
Alignment:
Q  66 gtttggataaacagtttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtata 165  Q
    |||||||||||||  || ||||||| | |||||| ||| | || ||||| ||| | ||| ||||||||||||| |||| |||  ||| | |||| |||||    
T  6466219 gtttggataaacaacttcttttgcagcttatagcgtaagcgcttatgaataagttgtttatataacacaagatcaaataaagtgaaattctttttgtata 6466120  T
Q  166 atctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgtttt 250  Q
    |||||| ||||||||  ||||||||| ||| |||| |||||||||||||  ||||| | ||||| ||||| |||||| |||||||    
T  6466119 atctataagttgtttccataagctattctagagagattatggaaataagttgaaaatagcttatgaacatctcataagttgtttt 6466035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 266
Target Start/End: Complemental strand, 7694115 - 7693984
Alignment:
Q  134 aagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaac 233  Q
    ||||| |||| ||| ||||||||||| |||||| |||| || |||||| ||||| ||||||  ||||||||||||||||||| ||||||||||||| |||    
T  7694115 aagatgaaatgaagtcaaactgtttttgtataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaac 7694016  T
Q  234 atttcataaattgttttcataagttttctcaaa 266  Q
    || |||| || |  |||||||||||||| ||||    
T  7694015 atgtcattaact-atttcataagttttcacaaa 7693984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 24929443 - 24929559
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccga 218  Q
    |||||||||||||| |||||||||| ||| | |||||||||| || || |||| ||||||||| |||| || | ||| |||| |||||||||||||| ||    
T  24929443 ctatttctataacaaaagataaaataaagtctaactgttttcataaaagctataagttgttttcataaactctactagagagcttatggaaataagctga 24929542  T
Q  219 aaacaacttataaacat 235  Q
    |||||| |||| |||||    
T  24929543 aaacaatttatgaacat 24929559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 6979033 - 6978959
Alignment:
Q  168 ctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataa 242  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||||| ||||||| |||||| |||| ||||||    
T  6979033 ctataagttgtttttataagccatcctaaagagtttatgaaaataagctgaaaacagcttatagacatgtcataa 6978959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 258
Target Start/End: Original strand, 1137653 - 1137801
Alignment:
Q  110 atgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaa 209  Q
    ||||| || |||||||||||| || | ||||||| ||| || | | |||| | ||||||||| || || ||| |||| |||||| | |||| ||||||||    
T  1137653 atgaataaactatttctataataccatataaaataaagtcatattatttttgaataatctataagctgctttcataaactatccaagagagcttatggaa 1137752  T
Q  210 ataagccgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
    |||| | ||||||||||||| ||||| ||||||  ||||||||||||||    
T  1137753 ataaactgaaaacaacttatgaacatgtcataagatgttttcataagtt 1137801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 116 - 235
Target Start/End: Original strand, 17884015 - 17884134
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||||||||||| |||||||||| |||  ||| |||||| ||||||  ||| ||||||||| |||||||||  |  |||| ||||| |||| |||    
T  17884015 aagctatttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcataagctatattggagagcttatgaaaattagc 17884114  T
Q  216 cgaaaacaacttataaacat 235  Q
     ||||||||||||| |||||    
T  17884115 tgaaaacaacttatgaacat 17884134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 266
Target Start/End: Complemental strand, 24371077 - 24370924
Alignment:
Q  116 aagctatttctataac-acaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataag 214  Q
    |||||||||||||||| | |||||||||| ||  |||| || |||   | || |||| ||||||||| ||||||||||||||| ||||||| ||||||||    
T  24371077 aagctatttctataaccaaaagataaaataaattcaaattgcttttacaaaagctataagttgttttcataagctatcctaaatagtttatagaaataag 24370978  T
Q  215 ccgaaaacaactta--taaacatttcataaattgttttcataagttttctcaaa 266  Q
    | ||||||  ||||  || |||| |||||| |||||| |||||||||| |||||    
T  24370977 ctgaaaacggcttatgtatacatgtcataagttgtttccataagttttatcaaa 24370924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 241
Target Start/End: Complemental strand, 30207686 - 30207569
Alignment:
Q  123 ttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaac 222  Q
    |||||||||| || ||||||| ||  |||||||||||| ||||| |||| ||||||||| |||||||| | || |||| |||||||||||||| ||||||    
T  30207686 ttctataacaaaaaataaaataaat-caaactgttttcatataagctataagttgttttcataagctaccttagagagattatggaaataagctgaaaac 30207588  T
Q  223 aacttataaacatttcata 241  Q
    | |||| | |||| |||||    
T  30207587 agcttacagacatgtcata 30207569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 261
Target Start/End: Complemental strand, 54325157 - 54325015
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccga 218  Q
    |||||||||| ||| |||||||||| ||| |||||||||||| ||||| |||| || | |||| | |||||||| |  |||||||||||| |||| | ||    
T  54325157 ctatttctattacaaaagataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctatcatggagagtttatggagataaactga 54325058  T
Q  219 aaacaacttataaacatttcataaattgttttcataagttttc 261  Q
    ||||| |||||  |||| ||||||| | ||| | |||||||||    
T  54325057 aaacagcttatggacatatcataaactatttccgtaagttttc 54325015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 267
Target Start/End: Original strand, 35064820 - 35064950
Alignment:
Q  134 aagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaac 233  Q
    |||||||||| |||  |||||||||| |||||  ||||  | |||||| ||||| |||| |  ||||||||||||||||||| |||||||| ||||||||    
T  35064820 aagataaaataaagataaactgtttttgtataggctatatgctgttttcataagatatcatggagagtttatggaaataagctgaaaacaatttataaac 35064919  T
Q  234 atttcataaattgttttcataagttttctcaaat 267  Q
    ||    ||  ||||||||||||||| ||||||||    
T  35064920 at---gtaggttgttttcataagttctctcaaat 35064950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 53422276 - 53422380
Alignment:
Q  83 attttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgttttt 182  Q
    |||||||| | |||||||||| | || ||||| |||||||||||| ||||||||||||||| ||  ||||| ||||| ||||||||    |||||||||     
T  53422276 attttgcagcttatagcataagctcttatgaataagctatttctacaacacaagataaaataaattcaaacagtttttgtataatc----agttgttttc 53422371  T
Q  183 ataagctat 191  Q
    |||||||||    
T  53422372 ataagctat 53422380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 242
Target Start/End: Original strand, 29263321 - 29263443
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    ||||||| ||||| | |||||||| |||  | | |||||||  |||| | || ||||||||| ||||||||||||  |||| || ||||||||||| |||    
T  29263321 tatttctctaacagatgataaaataaagttacattgttttcaaataagcgataagttgttttcataagctatcctgcagagcttgtggaaataagctgaa 29263420  T
Q  220 aacaacttataaacatttcataa 242  Q
    |||||||||| ||||| ||||||    
T  29263421 aacaacttatgaacatatcataa 29263443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 266
Target Start/End: Original strand, 4071832 - 4071975
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccga 218  Q
    |||||||||||||| |||||||||| ||| |||| | ||||| ||||| |||| ||||||| | ||||||||   || |||| ||||||| | |||| ||    
T  4071832 ctatttctataacaaaagataaaataaagtcaaattattttcatataagctataagttgttatgataagcta---tagagagcttatggaca-aagctga 4071927  T
Q  219 aaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    ||||||||||  ||||  ||||||  |||||||||||| | |||||||    
T  4071928 aaacaacttaccaacaaatcataagctgttttcataagctctctcaaa 4071975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 110 - 266
Target Start/End: Original strand, 2996514 - 2996670
Alignment:
Q  110 atgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaa 209  Q
    ||||| |||||| ||| |||||| ||||||||||  || |||| ||||||  |||||  ||| ||||||||| |||||||||| |  ||||  |||| ||    
T  2996514 atgaataagctacttcgataacataagataaaatacagtcaaattgtttttatataagttataagttgttttcataagctatcttggagagcgtatgaaa 2996613  T
Q  210 ataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    |||||  ||||| | |||||  |||| |||||| ||||||||||||| | |||||||    
T  2996614 ataagttgaaaaaagcttatggacatgtcataagttgttttcataagctctctcaaa 2996670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 6987846 - 6987766
Alignment:
Q  134 aagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataag 214  Q
    |||||||||  ||| |||||||||||||||| | ||||||||| ||||| || ||||||||  |||| |||||||||||||    
T  6987846 aagataaaacaaagtcaaactgttttcgtattaactattagttatttttttacgctatcctggagagcttatggaaataag 6987766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 122 - 258
Target Start/End: Complemental strand, 22666843 - 22666707
Alignment:
Q  122 tttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaa 221  Q
    ||||| |||||||||||||||| | | ||||||||||||  ||||||||| |  | |||| |||||| | ||   ||||| ||||||||||| | |||||    
T  22666843 tttctgtaacacaagataaaataaggtcaaactgttttcagataatctataaactattttcataagcaaaccagtagagtgtatggaaataaactgaaaa 22666744  T
Q  222 caacttataaacatttcataaattgttttcataagtt 258  Q
     | ||||| ||||| |||||| || ||||||||||||    
T  22666743 tagcttatgaacatatcataagtttttttcataagtt 22666707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 30581782 - 30581702
Alignment:
Q  134 aagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataag 214  Q
    |||||||||| ||| |||||| ||||||||||| |||| || |||||| ||||| |||| |  ||||||||||||||||||    
T  30581782 aagataaaatgaagtcaaactattttcgtataagctataagctgttttaataagttatcttggagagtttatggaaataag 30581702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 45128430 - 45128326
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccga 218  Q
    |||||||||||||| |||||||||||||  |||| | || || ||||| |||| | ||||||| |||| || ||||| | || |||||||||||||| ||    
T  45128430 ctatttctataacaaaagataaaatcaaatcaaattattctcatataagctataaattgttttcataaactgtcctataaagcttatggaaataagctga 45128331  T
Q  219 aaaca 223  Q
    |||||    
T  45128330 aaaca 45128326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 256
Target Start/End: Original strand, 1965933 - 1966028
Alignment:
Q  161 gtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    ||||||| ||| |||| |||||||||||||||||| | |  || ||||||||||   |||||| ||||| ||||| |||||| |||||||||||||    
T  1965933 gtataatttataagttatttttataagctatcctagaaatcttctggaaataagttaaaaacagcttatgaacatgtcataagttgttttcataag 1966028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 254
Target Start/End: Complemental strand, 8469413 - 8469362
Alignment:
Q  203 tatggaaataagccgaaaacaacttataaacatttcataaattgttttcata 254  Q
    ||||||||||||| ||||||||||||| ||||| |||||||||| |||||||    
T  8469413 tatggaaataagctgaaaacaacttatgaacatgtcataaattgctttcata 8469362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 21952522 - 21952577
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctat 171  Q
    ||||||||||||||||| ||| |||||||||| ||||||||| |||||||| ||||    
T  21952522 aagctatttctataacaaaaggtaaaatcaagtcaaactgttatcgtataagctat 21952577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 266
Target Start/End: Complemental strand, 50742957 - 50742809
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||| |||||||||| ||||||| ||| ||   |||||| |||||||  || | ||||||| ||||||||||||  |||| ||||| |||| ||     
T  50742957 aagctatttttataacacaacataaaattaagtcat--tgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagt 50742860  T
Q  216 cgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
     |||||||   ||| ||||| |||| || |||||||||||||| |||||||    
T  50742859 tgaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaa 50742809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 55547107 - 55547041
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataa 242  Q
    |||||| ||||||||| || || |||||||||||||||||  ||||||||||||| |||| ||||||    
T  55547107 tgttttcataagctatgctgaaaagtttatggaaataagctaaaaacaacttatagacatgtcataa 55547041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 229
Target Start/End: Original strand, 8468935 - 8469008
Alignment:
Q  156 ttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    ||||| ||||| |||||||||||||| ||||| ||| ||| |||| ||||| |||||| | |||||||||||||    
T  8468935 ttttcatataagctattagttgttttcataagttattctagagagcttatgaaaataatctgaaaacaacttat 8469008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 30631943 - 30632047
Alignment:
Q  155 gttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcata 254  Q
    ||||| ||||||||||| ||||||||| || ||||||| | ||| | || |||||||||||  |||||| ||||| |||||  ||||| ||||||| |||    
T  30631943 gtttttgtataatctat-agttgttttcatgagctatcatgaagtgcttttggaaataagcttaaaacagcttatgaacatgccataagttgtttttata 30632041  T
Q  255 agtttt 260  Q
    ||||||    
T  30632042 agtttt 30632047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 258
Target Start/End: Original strand, 42866048 - 42866157
Alignment:
Q  149 caaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgtt 248  Q
    |||||||||||  ||||| |||| ||||||||| ||||||||||||  |||| |||||||| |||||  ||| || |||||  |||| ||||| | ||||    
T  42866048 caaactgtttttatataagctataagttgttttcataagctatccttgagagcttatggaagtaagctaaaagcatcttatggacatatcatagaatgtt 42866147  T
Q  249 ttcataagtt 258  Q
    | ||||||||    
T  42866148 tacataagtt 42866157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 3891518 - 3891611
Alignment:
Q  110 atgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttat 205  Q
    ||||| || ||||||||||||||   |||||||| ||| | ||| ||||| ||||||| | | ||||||||||||||||||||||| |||| ||||    
T  3891518 atgaataaactatttctataacag--gataaaataaagtcgaaccgtttttgtataatatgtaagttgtttttataagctatcctagagagcttat 3891611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 18019951 - 18020026
Alignment:
Q  149 caaactgttttcgtataatctatt-agttgtttttataagctatcctaaagagtttatggaaataagccgaaaaca 223  Q
    |||||||||||| ||||| ||  | ||||||||| ||||||||| ||| ||||||||||||||||| | |||||||    
T  18019951 caaactgttttcatataaacttgtgagttgttttcataagctatgctagagagtttatggaaataaactgaaaaca 18020026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 23819041 - 23819171
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    |||||| |||||| || |||||||  || |||||||||||| |||||  ||| |  |||||| |||||||||| | ||||| |||| ||||||||  |||    
T  23819041 tatttccataaca-aatataaaatgtagtcaaactgttttcatataagttataacatgttttcataagctatcttgaagagcttatagaaataagatgaa 23819139  T
Q  220 aacaacttataaacatttcataaattgttttc 251  Q
    ||||||||||  |||| ||||||  |||||||    
T  23819140 aacaacttatggacatgtcataagctgttttc 23819171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 229
Target Start/End: Complemental strand, 30338712 - 30338601
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgttttt-ataagctatcctaaagagtttatggaaataagccg 217  Q
    |||||||||||||| |||||| ||| |||  ||||||||||| ||||| |||| |  ||||||| ||||||| || |  |||||||||| ||||||||      
T  30338712 ctatttctataacaaaagatagaataaagttaaactgttttcatataagctataaactgtttttcataagctctcttggagagtttatgaaaataagcat 30338613  T
Q  218 aaaacaacttat 229  Q
    |||||| |||||    
T  30338612 aaaacagcttat 30338601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 35743296 - 35743355
Alignment:
Q  183 ataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataa 242  Q
    |||| ||||| | |||||||||||||||||||  | ||||||||||||||||| ||||||    
T  35743296 ataaactatcatgaagagtttatggaaataagttggaaacaacttataaacatgtcataa 35743355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 52645872 - 52645829
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgtttt 159  Q
    ||||||||||||||||| |||||||||||||  |||||||||||    
T  52645872 aagctatttctataacaaaagataaaatcaattcaaactgtttt 52645829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 215
Target Start/End: Original strand, 52735069 - 52735168
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||||| ||||| |||||||||| ||| |||| |  |||| |||||  |||  ||||||||  ||||||||| | ||||| ||||||||||||||    
T  52735069 aagctatttctgtaacaaaagataaaataaagtcaaattactttcatataagttatatgttgttttcgtaagctatcttgaagagcttatggaaataagc 52735168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 3176141 - 3176087
Alignment:
Q  202 ttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    |||||||||||||| |||||||||||||| ||||  |||||  ||||||||||||    
T  3176141 ttatggaaataagctgaaaacaacttatagacatgacataagatgttttcataag 3176087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 13949951 - 13949893
Alignment:
Q  132 acaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagcta 190  Q
    |||||||||||| ||| |||| ||||||| ||||| |||| |||||||| |||||||||    
T  13949951 acaagataaaataaagtcaaattgttttcatataagctataagttgtttgtataagcta 13949893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 21157748 - 21157814
Alignment:
Q  149 caaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||||| | ||| |||| || |||||| ||| |||||||| ||||| ||||||||||||||    
T  21157748 caaactgttttcatgtaagctataagatgttttcatatgctatcctgaagagcttatggaaataagc 21157814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 29467675 - 29467621
Alignment:
Q  188 ctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataa 242  Q
    |||||||| ||||||||||||||||||| ||||||| |||||  |||| ||||||    
T  29467675 ctatcctagagagtttatggaaataagctgaaaacagcttatggacatgtcataa 29467621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 37575979 - 37575909
Alignment:
Q  196 aagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    |||||||||||||||| ||| ||||||||||||| |  || | |||| || |||||||||||| |||||||    
T  37575979 aagagtttatggaaatgagctgaaaacaacttatgagtatgttataagttattttcataagttctctcaaa 37575909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 258
Target Start/End: Complemental strand, 47119084 - 47118946
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    |||||||||| || |||||||||  |||  ||| ||||||| ||||| |||| |||||| || ||| |||||| | ||||  ||||| | |||||| |||    
T  47119084 tatttctatatcaaaagataaaacaaagttaaattgttttcatataagctataagttgtattcatatgctatcttgaagaacttatgaagataagctgaa 47118985  T
Q  220 aacaacttataaacatttcataaattgttttcataagtt 258  Q
    ||||||  ||||  || |||| | |||||||||||||||    
T  47118984 aacaaccaataacaatgtcatgagttgttttcataagtt 47118946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 50745947 - 50746017
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataa 186  Q
    ||||||||| ||||||| |||||||||| ||  |||||||||||  ||||| |||  ||||||||||||||    
T  50745947 aagctatttttataacaaaagataaaataaaatcaaactgtttttatataaactacaagttgtttttataa 50746017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 4691881 - 4691946
Alignment:
Q  202 ttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaat 267  Q
    ||||| |||||||| ||||||||| |||   ||| |||||| |||||| |||||||||||||||||    
T  4691881 ttatgaaaataagctgaaaacaacatatgggcatgtcataagttgtttccataagttttctcaaat 4691946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 266
Target Start/End: Complemental strand, 27123394 - 27123325
Alignment:
Q  197 agagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    |||| |||||||||||||  |||||||||||| | |||| |||||| |||||| |||||| | |||||||    
T  27123394 agagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaa 27123325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 38478683 - 38478728
Alignment:
Q  110 atgaaaaagctatttctataacacaagataaaatcaaggcaaactg 155  Q
    ||||| ||||||||||||||||||||||||| || ||| |||||||    
T  38478683 atgaataagctatttctataacacaagataagataaagtcaaactg 38478728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 42322008 - 42321884
Alignment:
Q  110 atgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaa 209  Q
    ||||| ||||||||| ||||||| | |||||||| ||| |||| ||||||| |||||  ||| |||||||||  |||| |||  | |||||||||  |||    
T  42322008 atgaataagctatttttataacaaatgataaaataaagtcaaattgttttcatataaattataagttgttttc-taagttataatgaagagtttaaagaa 42321910  T
Q  210 ataagccgaaaacaacttataaacat 235  Q
     ||| | ||||||||||||| |||||    
T  42321909 ctaaactgaaaacaacttatgaacat 42321884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 46110210 - 46110291
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagt 257  Q
    |||||| |||||||||  |  |||| |||| ||||||||| ||||||||||||| |  || |||||| ||||||||||||||    
T  46110210 tgttttcataagctatgattgagagcttatagaaataagctgaaaacaacttatgagtatatcataagttgttttcataagt 46110291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 53943588 - 53943693
Alignment:
Q  151 aactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgtttt 250  Q
    |||||||||| ||||| |||| ||||||||  ||||| | || |  |||| |||||||||||||| |||| ||| | || |||| |||||||||  ||||    
T  53943588 aactgttttcatataaactataagttgtttacataagttgtcatggagagcttatggaaataagctgaaatcaagtcatgaacacttcataaatcatttt 53943687  T
Q  251 cataag 256  Q
    ||||||    
T  53943688 cataag 53943693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 55870459 - 55870390
Alignment:
Q  121 atttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagcta 190  Q
    |||| ||||||| ||||| |||| ||| ||||||||||||  |||| |||| ||||||||| ||||||||    
T  55870459 atttttataacaaaagatcaaataaagtcaaactgttttcacataagctataagttgttttcataagcta 55870390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 5131304 - 5131260
Alignment:
Q  185 aagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    ||||||||||  |||| |||||||||||||| |||||||||||||    
T  5131304 aagctatcctggagagcttatggaaataagctgaaaacaacttat 5131260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 256
Target Start/End: Original strand, 18011878 - 18011958
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    |||||| |||||||||| | ||||||||||| ||||||||  |||||  |||||| |||| | ||||  ||||||||||||    
T  18011878 tgttttcataagctatcttgaagagtttatgaaaataagctaaaaacggcttatatacatattataagctgttttcataag 18011958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 19395103 - 19395043
Alignment:
Q  207 gaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaat 267  Q
    ||||||||| ||||| | ||||||||||| || ||| ||||||| ||||||| ||||||||    
T  19395103 gaaataagctgaaaatagcttataaacatgtcgtaagttgtttttataagttctctcaaat 19395043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 20936122 - 20936066
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagt 175  Q
    |||||||||||||| |||||||||| ||| |||||| ||||| | ||| ||||||||    
T  20936122 ctatttctataacaaaagataaaataaagtcaaactattttcatgtaagctattagt 20936066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 215
Target Start/End: Complemental strand, 45104535 - 45104431
Alignment:
Q  111 tgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaa 210  Q
    |||| |||||||||| |  ||||| |||||||| ||| |||  ||||||  ||||||| || || ||||| ||||||||||||  ||||||||||  |||    
T  45104535 tgaataagctatttcgacgacacatgataaaataaagtcaacttgtttttatataatccataagctgtttgtataagctatccataagagtttataaaaa 45104436  T
Q  211 taagc 215  Q
    |||||    
T  45104435 taagc 45104431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 47970265 - 47970309
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttc 160  Q
    ||||||||||||||||| |||||||||| ||| |||||| |||||    
T  47970265 aagctatttctataacaaaagataaaatgaagtcaaactattttc 47970309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 281971 - 281845
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||| |||||||| |||||||||| ||| |||  ||||||| ||||| |||| || ||| || ||||||||||||| |||| | ||||||||||||    
T  281971 aagctattcctataacaaaagataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcctagagagctcatggaaataagc 281872  T
Q  216 cgaaaacaacttataaacatttcataa 242  Q
     |||||||||||||| |||| ||||||    
T  281871 tgaaaacaacttatagacatgtcataa 281845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 266
Target Start/End: Original strand, 33887767 - 33887927
Alignment:
Q  106 actaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttat 205  Q
    ||||||||| ||| ||||| |||||||||||||||||  ||  ||||||||||| |||||||| || |  |||||| |||||||||||| ||  | ||||    
T  33887767 actaatgaataagatatttttataacacaagataaaacaaactcaaactgttttagtataatcaataaactgttttcataagctatcctgaaatgcttat 33887866  T
Q  206 ggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    |||||||||  ||||||||||| | ||||| ||||||  | ||||||||| || |||||||    
T  33887867 ggaaataagttgaaaacaacttgtgaacatgtcataagctattttcataaattctctcaaa 33887927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 118 - 249
Target Start/End: Original strand, 2117352 - 2117483
Alignment:
Q  118 gctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccg 217  Q
    ||||||||||| ||| | |||||||  ||| |||||| ||||| |||||||||| ||||||||| ||||| ||||||| |||| |||| |||||||||      
T  2117352 gctatttctatgacaaaggataaaacaaagtcaaactattttcatataatctataagttgttttcataagttatcctagagagcttattgaaataagcta 2117451  T
Q  218 aaaacaacttataaacatttcataaattgttt 249  Q
    |||||| |||||| ||||  ||||||||||||    
T  2117452 aaaacagcttatagacatgccataaattgttt 2117483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 68 - 252
Target Start/End: Complemental strand, 33080753 - 33080565
Alignment:
Q  68 ttggataaacagtttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataat 167  Q
    ||||||||| ||||||||||||| | |||||||||| |||| ||||| ||||| ||||||||||||| |||||| ||||| |||| |||||| ||||  |    
T  33080753 ttggataaatagtttattttgcagcttatagcataagcacttatgaataagctttttctataacacaggataaattcaagtcaaattgtttttgtatggt 33080654  T
Q  168 ct----attagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttca 252  Q
    ||    || || | |||  |||| |||||||  |||| |||| ||||||| | ||||| ||||||||||||| |||||| ||| |||||    
T  33080653 ctataaataagctatttacataaactatcctggagagcttatagaaataaactgaaaataacttataaacatgtcataagttggtttca 33080565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 30523951 - 30524034
Alignment:
Q  183 ataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    |||||||||||||||||| ||||||||||||||  ||| ||||| ||  |||| |||||| |||||||||||||||||||||||    
T  30523951 ataagctatcctaaagagcttatggaaataagctaaaagcaactaatggacatgtcataatttgttttcataagttttctcaaa 30524034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 252
Target Start/End: Original strand, 4006665 - 4006797
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    ||||||||||||| | |||||||| ||| |||| ||||||  ||||| |||| ||||||||| |||||||||||   |||| ||||| |||||||| |||    
T  4006665 tatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctatccctgagaggttatgaaaataagctgaa 4006764  T
Q  220 aacaacttataaacatttcataaattgttttca 252  Q
    || |||||||  |||| || ||| |||||||||    
T  4006765 aataacttatggacatatcgtaagttgttttca 4006797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 20377991 - 20377903
Alignment:
Q  168 ctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    |||| ||||||||| |||| | |||||| |||| ||  ||||||||||||||||||||||||| |||| |||||| |||||||||||||    
T  20377991 ctataagttgttttcataatccatcctatagagctttgggaaataagccgaaaacaacttatagacatgtcataagttgttttcataag 20377903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 258
Target Start/End: Complemental strand, 31776396 - 31776254
Alignment:
Q  117 agctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagcc 216  Q
    ||||||||||||||||||| ||||||| ||| |||| |||||| |||||||  || ||||||||| |||||||||  |  |||| | ||||||||| |||    
T  31776396 agctatttctataacacaa-ataaaataaagtcaaattgtttttgtataattaataagttgttttcataagctataatggagagctaatggaaatacgcc 31776298  T
Q  217 gaaaacaacttata--aacatttcataaattgttttcataagtt 258  Q
    ||||||| ||||||  | ||| |||||| ||||||| |||||||    
T  31776297 gaaaacagcttatatgagcatgtcataagttgttttaataagtt 31776254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 116 - 266
Target Start/End: Original strand, 2735016 - 2735167
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||| ||||||||| |||||||||| |||  ||| | |||| ||||||||||| || |||||| |||||| ||| | || |  ||||| ||||||||    
T  2735016 aagctatgtctataacaaaagataaaataaagttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataagc 2735115  T
Q  216 cgaaaacaacttat-aaacatttcataaattgttttcataagttttctcaaa 266  Q
    |||||||| ||||| ||| || ||||||   ||||||||||||| |||||||    
T  2735116 cgaaaacagcttatgaaaaatgtcataagccgttttcataagttatctcaaa 2735167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 34403842 - 34403937
Alignment:
Q  156 ttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttc 251  Q
    ||||||||||||| || || |||||| ||||||| | |||||||| |||||||||||||  ||||||| ||||| ||||| |||||| ||||||||    
T  34403842 ttttcgtataatcgataagatgttttcataagctgtactaaagagcttatggaaataaggtgaaaacaccttatgaacatgtcataagttgttttc 34403937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 175 - 256
Target Start/End: Complemental strand, 7931790 - 7931709
Alignment:
Q  175 ttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    ||||||| | ||||||||||| |||| ||| |||||||||| ||||||||||||  ||||| |||||| |||||||||||||    
T  7931790 ttgttttcaaaagctatcctacagagcttacggaaataagctgaaaacaacttaagaacatgtcataagttgttttcataag 7931709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 31624205 - 31624278
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagct 189  Q
    ||||||||||||||||| |||||||||| |    ||| ||||||||||||||||||||| |||||| |||||||    
T  31624205 aagctatttctataacaaaagataaaataagtttaaattgttttcgtataatctattagctgttttaataagct 31624278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 256
Target Start/End: Original strand, 32665665 - 32665746
Alignment:
Q  175 ttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    ||||||||||||||||||||||||||||| |||||||| || |||||||   ||||  ||| ||||||| ||||| ||||||    
T  32665665 ttgtttttataagctatcctaaagagtttgtggaaatatgctgaaaacaggctataggcatgtcataaaatgtttccataag 32665746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 33826858 - 33826777
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaa 197  Q
    ||||||||| ||||||| ||||| |||| ||| ||||||||||| ||||||| ||| ||  ||||||||||| |||||||||    
T  33826858 aagctatttatataacagaagattaaataaagtcaaactgtttttgtataatatataagcagtttttataagttatcctaaa 33826777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 1402943 - 1403019
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatc 192  Q
    ||||||||||||||||| |||||||||| |||  ||||| ||||| ||||| |||| | ||||||| ||||||||||    
T  1402943 aagctatttctataacaaaagataaaataaagttaaactattttcatataagctataaattgttttcataagctatc 1403019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 2112188 - 2112280
Alignment:
Q  157 tttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttt 249  Q
    |||| ||||| |||| ||||||||| |||| ||||| || || | |||| ||||||| ||||||||||||||| ||||| |||||| ||||||    
T  2112188 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgttt 2112280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 134 - 249
Target Start/End: Original strand, 4420610 - 4420723
Alignment:
Q  134 aagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaac 233  Q
    |||||||||| ||| |||||| |||| |||||| |||  |||| ||||  ||||||||| |  |||| |||||||||||||| ||||||| ||||| |||    
T  4420610 aagataaaataaagtcaaactatttttgtataagcta--agttattttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaac 4420707  T
Q  234 atttcataaattgttt 249  Q
    || |||||| ||||||    
T  4420708 atgtcataatttgttt 4420723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 7945967 - 7945868
Alignment:
Q  155 gttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcata 254  Q
    ||||| ||||||||||| |  |||||| ||| ||||||||  |||| ||||||||||||||  ||||||||| ||||||||  ||||| |||||||||||    
T  7945967 gtttttgtataatctataacctgttttcata-gctatcctggagagcttatggaaataagcttaaaacaactaataaacatgccataagttgttttcata 7945869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 2027529 - 2027390
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||| ||||||| |||||||||| ||| |||||| ||||| ||||| |||| || |||| | |||||||| | |  ||||||||   ||||||||    
T  2027529 aagctatttttataacaaaagataaaataaagtcaaactattttcatataacctataagctgttctcataagctagcatgtagagtttaaataaataagc 2027430  T
Q  216 cgaaaacaacttataaacatttcataaattgttttcataa 255  Q
     ||||||| |||||  | || ||||||  |||||||||||    
T  2027429 tgaaaacagcttatggaaatgtcataagctgttttcataa 2027390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 9093679 - 9093572
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||||||| || |||||||||| |||  ||| ||||||||||||| |||| || |||||| ||||||| || || |||  ||| | ||||||||    
T  9093679 aagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaagaaaataagc 9093580  T
Q  216 cgaaaaca 223  Q
     |||||||    
T  9093579 tgaaaaca 9093572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 33832309 - 33832254
Alignment:
Q  203 tatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
    |||| ||||||||  |||||||||||||||||| |||||| |||||||||||||||    
T  33832309 tatgaaaataagctaaaaacaacttataaacatgtcataagttgttttcataagtt 33832254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 34939527 - 34939610
Alignment:
Q  183 ataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||||   || | |||||| |||||| |||||| | |||||||    
T  34939527 ataagctatcctgaagaggttatggaaataagctgaaaacaacttacggacgtgtcataagttgtttccataagctctctcaaa 34939610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 7931854 - 7931800
Alignment:
Q  174 gttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaactta 228  Q
    |||||||| | ||||||||||| |||| |||||||||||||| ||||||||||||    
T  7931854 gttgttttcacaagctatcctatagagcttatggaaataagctgaaaacaactta 7931800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 235
Target Start/End: Complemental strand, 17241395 - 17241256
Alignment:
Q  94 tatagcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcc 193  Q
    |||||||||| | || ||| | ||||||||||||||| ||| |||||||   || ||||||| |   ||||||||||| |||  |||| || |||||||     
T  17241395 tatagcataagcgcttatgcataagctatttctataaaacacgataaaacatagtcaaactgata--gtataatctataagtcattttcattagctatct 17241298  T
Q  194 taaagagtttatggaaataagccgaaaacaacttataaacat 235  Q
    |  ||||||||||||||||||  ||||||||||||| |||||    
T  17241297 tggagagtttatggaaataagttgaaaacaacttatgaacat 17241256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 24836318 - 24836217
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    ||||||||||||| |||||||||| ||| |||| ||||||||||||| |||| |   |||||  ||||||||| |  |||| |||||||||||||| | |    
T  24836318 tatttctataacaaaagataaaataaagtcaaattgttttcgtataaactataa---gttttcgtaagctatcatggagagcttatggaaataagctgga 24836222  T
Q  220 aacaa 224  Q
    |||||    
T  24836221 aacaa 24836217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 266
Target Start/End: Complemental strand, 31686426 - 31686336
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    |||||| ||||||||||||  |||| ||| ||| |||||| |||||||  |||||||| | |||||| ||||||| ||||||| |||||||    
T  31686426 tgttttcataagctatcctggagagcttacggacataagctgaaaacagattataaacttgtcataagttgttttgataagttctctcaaa 31686336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 191
Target Start/End: Original strand, 415245 - 415326
Alignment:
Q  110 atgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctat 191  Q
    ||||| ||| ||||||||| || | ||||||||  |||  ||| ||||||||||||| |||| |||||||||||||||||||    
T  415245 atgaataagttatttctattacgcgagataaaacaaagttaaattgttttcgtataagctataagttgtttttataagctat 415326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 254
Target Start/End: Complemental strand, 27909700 - 27909623
Alignment:
Q  177 gtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcata 254  Q
    ||||||||||||| | ||  |||| |||||||||||||| |||||||||||||  |||| ||||| ||||||| ||||    
T  27909700 gtttttataagctttactggagagcttatggaaataagctgaaaacaacttatggacatgtcatatattgtttccata 27909623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 256
Target Start/End: Complemental strand, 33500604 - 33500463
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||||||||||| |||||||| | ||  ||||||||||   |||||  ||| || |||||    |||||||| |  |||  |||||||||||||     
T  33500604 aagctatttctataacaaaagataaagtaaaatcaaactgtttcaatataagttataagctgtttccgcaagctatcatgtagaacttatggaaataagt 33500505  T
Q  216 cgaaaa-caacttataaacatttcataaattgttttcataag 256  Q
    |||||| ||||||||  |||| ||||||||||||||||||||    
T  33500504 cgaaaaacaacttatgcacatgtcataaattgttttcataag 33500463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 267
Target Start/End: Original strand, 2455298 - 2455358
Alignment:
Q  208 aaataagccgaaaacaacttataaac-atttcataaattgttttcataagttttctcaaat 267  Q
    |||||||| ||||||||||||||||| || | |||| ||||||||||||||| ||||||||    
T  2455298 aaataagctgaaaacaacttataaacaatgtaataagttgttttcataagttctctcaaat 2455358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 10272925 - 10272865
Alignment:
Q  140 aaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagag 200  Q
    |||| ||| |||||||||||||||| ||||||||||||||| |||||| || || ||||||    
T  10272925 aaataaagtcaaactgttttcgtattatctattagttgtttctataagttagcccaaagag 10272865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 20671988 - 20671877
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||||| | || |||||||||| ||| |||| ||||||||||||| || | | ||||||| |||| ||||| || |||| || ||||| |||||    
T  20671988 aagctatttctagatcaaaagataaaataaagtcaaattgttttcgtataagctttaaattgttttcataaactatcatagagagctt-tggaagtaagc 20671890  T
Q  216 cgaaaacaactta 228  Q
     ||||||| ||||    
T  20671889 tgaaaacagctta 20671877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 32578043 - 32577959
Alignment:
Q  182 tataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    ||||||||||||| |||||  ||||||||||||| ||||||| || |   |||| |||||| ||||||||||||| | |||||||    
T  32578043 tataagctatcctgaagagcatatggaaataagctgaaaacagctcaaggacatgtcataagttgttttcataagctctctcaaa 32577959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 247
Target Start/End: Original strand, 3155123 - 3155253
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||| ||| | ||| |||||||||  ||| |||||||||| | ||||| |||| || | |||| ||||| ||||||  |||| | ||||||||||||    
T  3155123 aagctatctcttttacaaaagataaaacaaagtcaaactgtttccatataacctataagctattttcataagatatcctggagagct-atggaaataagc 3155221  T
Q  216 cgaaaacaacttataaacatttcataaattgt 247  Q
     ||||||| |||||| |||| |||||| ||||    
T  3155222 tgaaaacagcttatagacatgtcataagttgt 3155253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 249
Target Start/End: Complemental strand, 3181173 - 3181059
Alignment:
Q  134 aagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaac 233  Q
    |||||||||| ||| ||||| |||||| ||||| | || |  |||||| ||||| |||| |  |||| | || ||||||||||| ||| |||||||||||    
T  3181173 aagataaaataaagtcaaaccgttttcatataaaccataaactgttttcataagttatcttggagagct-attgaaataagccggaaataacttataaac 3181075  T
Q  234 atttcataaattgttt 249  Q
    ||||||||| ||||||    
T  3181074 atttcataagttgttt 3181059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 27893994 - 27894100
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||||| |||| || ||||||| ||| |||| ||||||  ||||| ||||||| |||||| ||||| |||| | || || ||||| ||||||||    
T  27893994 aagctatttctacaacagaatataaaataaagtcaaattgttttaatataaactattag-tgttttcataagatatcttgaaaagcttatgaaaataagc 27894092  T
Q  216 cgaaaaca 223  Q
     |||||||    
T  27894093 tgaaaaca 27894100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 34939758 - 34939817
Alignment:
Q  183 ataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataa 242  Q
    ||||||||||||  ||||||||||||||||||| |||||||| ||||  |||| ||||||    
T  34939758 ataagctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataa 34939817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 6536974 - 6537020
Alignment:
Q  196 aagagtttatggaaataagccgaaaacaacttataaacatttcataa 242  Q
    ||||| |||||||||||||| ||||||||||||| ||||| ||||||    
T  6536974 aagagcttatggaaataagctgaaaacaacttatgaacatgtcataa 6537020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 24782006 - 24782056
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataa 166  Q
    ||||||||||||||||| |||||||||||||  |||| ||||||| |||||    
T  24782006 aagctatttctataacaaaagataaaatcaaatcaaattgttttcatataa 24782056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 30604907 - 30604993
Alignment:
Q  180 tttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    ||||| || |||||| |||||  ||||||||||||  ||||| ||||||| |||||||||||  ||||||| ||||| | |||||||    
T  30604907 tttattagttatcctgaagagagtatggaaataagttgaaaagaacttatgaacatttcataggttgttttaataagctctctcaaa 30604993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 33498652 - 33498706
Alignment:
Q  202 ttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    |||||||||||||| ||||| ||| |||| |||| |||||| |||||||||||||    
T  33498652 ttatggaaataagctgaaaataacctatagacatgtcataagttgttttcataag 33498706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 266
Target Start/End: Complemental strand, 2460193 - 2460124
Alignment:
Q  197 agagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    |||| |||||||||||||  |||||||||||| | |||| |||||| |||||| |||||| | |||||||    
T  2460193 agagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaa 2460124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 3785805 - 3785748
Alignment:
Q  134 aagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctat 191  Q
    |||||||||| |||  ||||||||||||||||| |||| || ||||||| ||||||||    
T  3785805 aagataaaataaagttaaactgttttcgtataagctataagctgtttttgtaagctat 3785748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 7785786 - 7785741
Alignment:
Q  197 agagtttatggaaataagccgaaaacaacttataaacatttcataa 242  Q
    |||| |||||||||||||| |||||||||||||| |||| ||||||    
T  7785786 agagcttatggaaataagctgaaaacaacttatagacatgtcataa 7785741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 34633247 - 34633206
Alignment:
Q  118 gctatttctataacacaagataaaatcaaggcaaactgtttt 159  Q
    ||||||||||||| |||||||||||| ||| |||||||||||    
T  34633247 gctatttctataaaacaagataaaatgaagtcaaactgtttt 34633206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 725745 - 725673
Alignment:
Q  149 caaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaa 221  Q
    |||||||||||  ||||| ||||  ||||||||| ||| |||| | |||||| |||||||||||||| |||||    
T  725745 caaactgtttttatataaactatatgttgtttttgtaacctattcgaaagagcttatggaaataagctgaaaa 725673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 10452483 - 10452419
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgttt 180  Q
    ||||||||||||||||| || ||||||| ||  |||||| ||||| ||||| |||| ||||||||    
T  10452483 aagctatttctataacaaaatataaaataaaatcaaactattttcatataagctataagttgttt 10452419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 30863273 - 30863333
Alignment:
Q  196 aagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    ||||| |||| ||| ||||| |||||||||||||  |||| |||||| |||||||||||||    
T  30863273 aagagcttatagaagtaagctgaaaacaacttatgtacatgtcataagttgttttcataag 30863333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 267
Target Start/End: Original strand, 33089540 - 33089604
Alignment:
Q  203 tatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaat 267  Q
    |||| ||||||||  |||||||||||||||||| || |||  |||||||||||||| ||| ||||    
T  33089540 tatgaaaataagcgtaaaacaacttataaacatgtcctaagctgttttcataagttctctgaaat 33089604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 116 - 222
Target Start/End: Original strand, 29973028 - 29973134
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||||| ||||||||| |||||| ||| |||||| |||||  |||| |||| ||||||||| ||||||||||||  ||||||||||||||||| |    
T  29973028 aagctatttctttaacacaaggtaaaataaagtcaaactattttcacataagctataagttgttttcataagctatccttgagagtttatggaaataaac 29973127  T
Q  216 cgaaaac 222  Q
     ||||||    
T  29973128 tgaaaac 29973134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 926396 - 926508
Alignment:
Q  78 agtttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggc-aaactgttttcgtataatctattagtt 176  Q
    ||||||||||||| |  ||||||||| | |  ||||| |||||||||||||||||||||||||||| ||| | |||||||||| |||| |||||| ||||    
T  926396 agtttattttgcagctaatagcataagcgcatatgaataagctatttctataacacaagataaaataaagtcaaaactgtttttgtattatctataagtt 926495  T
Q  177 gtttttataagct 189  Q
    ||||| |||||||    
T  926496 gttttcataagct 926508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 66 - 211
Target Start/End: Complemental strand, 34522229 - 34522082
Alignment:
Q  66 gtttggataaacagtttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaact--gttttcgta 163  Q
    ||||||||||| |  |||||||||||| || ||||||| | || ||||| ||||||||||||| |||||||||||||| ||| ||||||   |||| |||    
T  34522229 gtttggataaaaaacttattttgcaacttacagcataagcgcttatgaataagctatttctatgacacaagataaaataaagtcaaactactttttagta 34522130  T
Q  164 taatctattagttgtttttataagctatcctaaagagtttatggaaat 211  Q
    |||||||  || | |||| | |||||||||||||||| ||||| ||||    
T  34522129 taatctaaaaggtattttcaaaagctatcctaaagagcttatgaaaat 34522082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 215
Target Start/End: Complemental strand, 27728142 - 27728045
Alignment:
Q  118 gctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||||||| | |||||||||| ||| |||||| ||||| |||||  ||||||||||||| ||||||||||||| || | | ||||||||||||    
T  27728142 gctatttctataaaaaaagataaaataaagtcaaactattttcatataaagtattagttgttttcataagctatcctagagggatgatggaaataagc 27728045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 28769462 - 28769349
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||| |||||||| |  ||||||| ||| |||||| ||||| ||||| |||| || |||||| |||||||||  |  |||||||||||||||||||    
T  28769462 aagctattcctataacaaactataaaattaagtcaaactattttcttataagctataagctgttttcataagctattttggagagtttatggaaataagc 28769363  T
Q  216 cgaaaacaacttat 229  Q
     |||||||||||||    
T  28769362 tgaaaacaacttat 28769349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 258
Target Start/End: Original strand, 38537548 - 38537680
Alignment:
Q  126 tataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaac 225  Q
    |||||||||||||||||| ||| |||  |||||| ||||||||||| || || ||| |||| ||||||| || |  | |||||||||||||||||| | |    
T  38537548 tataacacaagataaaatgaagtcaatttgtttttgtataatctataagctgctttcataaactatcctgaaaaactcatggaaataagccgaaaatagc 38537647  T
Q  226 ttataaacatttcataaattgttttcataagtt 258  Q
    |||| | ||| || ||| |||||||||||||||    
T  38537648 ttatgagcatgtcgtaagttgttttcataagtt 38537680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 258
Target Start/End: Complemental strand, 42215426 - 42215287
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccga 218  Q
    ||||||||| ||||  ||||||||| ||| ||||||||||| ||||||||||| |  | |||| ||| ||||||||  |||| ||||| |||||||| ||    
T  42215426 ctatttctacaacatgagataaaataaagtcaaactgtttttgtataatctataacctattttcatatgctatcctggagagcttatgtaaataagctga 42215327  T
Q  219 aaacaacttataaacatttcataaattgttttcataagtt 258  Q
    ||||| ||||| ||||  ||||||  ||||||||| ||||    
T  42215326 aaacagcttatgaacaagtcataagctgttttcattagtt 42215287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 266
Target Start/End: Original strand, 8060676 - 8060766
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    |||||| |||||| |||||| |||| |||||||||||||| ||||| ||||||| ||| || ||||| ||||||||||||| | |||||||    
T  8060676 tgttttcataagcaatcctagagagcttatggaaataagctgaaaataacttatgaactttccataatttgttttcataagctctctcaaa 8060766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 30277308 - 30277255
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    |||||| ||||||||||||| ||||||||||||||||||| |||||||||||||    
T  30277308 tgttttcataagctatcctagagagtttatggaaataagctgaaaacaacttat 30277255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 256
Target Start/End: Original strand, 4558745 - 4558885
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||||||||| | |||||||||| |||  ||| | ||||| ||||  |||| || |||||  ||||||||||||| |||| |||||||||||| |    
T  4558745 aagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccataagctatcctagagagcttatggaaataaac 4558844  T
Q  216 cgaaaacaacttataaacatttcataaattgttttcataag 256  Q
      ||||||||||||| |||  |||||| || ||| ||||||    
T  4558845 taaaaacaacttatagacacatcataagttatttccataag 4558885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 256
Target Start/End: Original strand, 11183492 - 11183632
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||||| ||||  ||||||||  ||| ||||||||  || ||| | |||| || |||||| | |||||| |||  |||| ||||||||||||||    
T  11183492 aagctatttctaaaacaacagataaaacaaagtcaaactgtcctcatattagctataagctgttttcacaagctaccctggagagcttatggaaataagc 11183591  T
Q  216 cgaaaacaacttataaacatttcataaattgttttcataag 256  Q
     ||||||| |||||| |||| |||||| ||||||| |||||    
T  11183592 tgaaaacagcttatagacatatcataagttgtttttataag 11183632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 24258042 - 24258149
Alignment:
Q  140 aaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttca 239  Q
    |||||||  |||||||||||||||||| |||| | ||||||     ||||||||||||||||||||| ||||||||  |||| ||| |||  |||| |||    
T  24258042 aaatcaaatcaaactgttttcgtataagctataaattgttt-----agctatcctaaagagtttatgtaaataagcttaaaataacctatgtacatgtca 24258136  T
Q  240 taaattgttttca 252  Q
    |||||||||||||    
T  24258137 taaattgttttca 24258149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 256
Target Start/End: Complemental strand, 30191244 - 30191124
Alignment:
Q  136 gataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacat 235  Q
    |||||||| ||| ||||||| |  | |||||||||| || | |||| |||||||||||| ||  |||||||||||||||| |||||||| || | |||||    
T  30191244 gataaaataaagtcaaactgctcacatataatctataagctattttgataagctatcctgaaatgtttatggaaataagctgaaaacaagttttgaacat 30191145  T
Q  236 ttcataaattgttttcataag 256  Q
     |||||| |||||| ||||||    
T  30191144 gtcataagttgtttccataag 30191124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 258
Target Start/End: Original strand, 3254235 - 3254314
Alignment:
Q  179 ttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
    ||||||||||||||||| ||||| ||| ||||||||| ||||||| ||||| ||||| ||||||  ||||||| ||||||    
T  3254235 ttttataagctatcctatagagtgtatagaaataagctgaaaacagcttatgaacatgtcataagctgttttcttaagtt 3254314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 266
Target Start/End: Original strand, 12851182 - 12851273
Alignment:
Q  175 ttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    ||||||| ||||||| ||||  |||| ||||| |||||||||||||||| ||||| ||||| | ||||  ||||||||||||||||| ||||    
T  12851182 ttgttttcataagctttccttgagagcttatgaaaataagccgaaaacatcttatgaacatgttataagctgttttcataagttttcccaaa 12851273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 266
Target Start/End: Complemental strand, 37822778 - 37822632
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccga 218  Q
    |||||| ||||||| || ||||| | ||  |||||||||| | |||||  ||| || ||||| || ||| |||| | ||||| ||||| |||||||  ||    
T  37822778 ctatttatataacaaaaaataaattaaattcaaactgtttacatataagatataagctgtttatagaagttatcttgaagagcttatgaaaataagt-ga 37822680  T
Q  219 aaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    |||||||||| |||||| |||||||||||||| |||| ||||||||||    
T  37822679 aaacaacttacaaacatatcataaattgttttaataaattttctcaaa 37822632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 258
Target Start/End: Original strand, 10383852 - 10383974
Alignment:
Q  136 gataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacat 235  Q
    |||||||| ||  ||| |||||||||||||||||||  | ||||||  ||| ||||| || |||| |||||||||||||| | ||||| ||||| || ||    
T  10383852 gataaaataaaatcaagctgttttcgtataatctatatgctgttttcgtaaactatcatatagagcttatggaaataagctgtaaacagcttatgaaaat 10383951  T
Q  236 ttcataaattgttttcataagtt 258  Q
     ||||||  ||||||||||||||    
T  10383952 gtcataagctgttttcataagtt 10383974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 14949875 - 14949953
Alignment:
Q  178 tttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    |||| |||||||||||||||||| |||| ||||||||| ||||||| |||||  |||| |||||| || ||||||||||    
T  14949875 ttttcataagctatcctaaagagattatagaaataagctgaaaacagcttatggacatgtcataagttattttcataag 14949953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 34770837 - 34770931
Alignment:
Q  114 aaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatgga 208  Q
    |||| ||||||| || ||| |||||||||| ||| |||| ||||||| | ||| |||| ||||||||| ||||||||||||| |||||| |||||    
T  34770837 aaaaactatttccattacaaaagataaaataaagtcaaattgttttcatttaagctataagttgttttcataagctatcctagagagttcatgga 34770931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 11188216 - 11188136
Alignment:
Q  178 tttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
    |||| ||||||||||||| ||||||||||| ||||| | |||||||| ||||| |||| ||||||  ||||||||| ||||    
T  11188216 ttttgataagctatcctagagagtttatggtaataaactgaaaacaagttatagacatgtcataagctgttttcattagtt 11188136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 154 - 258
Target Start/End: Original strand, 43504736 - 43504840
Alignment:
Q  154 tgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcat 253  Q
    |||||| ||| || |||| || ||||||||||||||||| |  |||  |||||||||||||| ||||||| ||||||||||  || ||| ||||||||||    
T  43504736 tgttttagtagaagctataagatgtttttataagctatcttggagaacttatggaaataagctgaaaacagcttataaacaagtcgtaagttgttttcat 43504835  T
Q  254 aagtt 258  Q
     ||||    
T  43504836 cagtt 43504840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 6950342 - 6950409
Alignment:
Q  189 tatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    |||||||||||| |||||||||||||| |||||||||||||  |||| |||||  |||||| ||||||    
T  6950342 tatcctaaagagcttatggaaataagctgaaaacaacttatcgacatgtcataggttgtttacataag 6950409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 255
Target Start/End: Original strand, 4390193 - 4390299
Alignment:
Q  149 caaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgtt 248  Q
    ||||||||||| | ||||||||| || | |||| ||||||| |||  ||||| |||  ||||||||  ||||||||||||| |||||  ||||| |||||    
T  4390193 caaactgtttttgcataatctataagctattttcataagctctccagaagagcttaatgaaataaggggaaaacaacttatgaacatgccataagttgtt 4390292  T
Q  249 ttcataa 255  Q
    |||||||    
T  4390293 ttcataa 4390299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 267
Target Start/End: Original strand, 8255388 - 8255490
Alignment:
Q  165 aatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctca 264  Q
    ||||||| || |||||| ||||| |||||||   |||||| |||||||||  |||||||||||||  |||| |||| | |||||| |||||||| |||||    
T  8255388 aatctataagatgttttcataagttatcctaggtagtttaaggaaataaggtgaaaacaacttatgcacatgtcattagttgtttccataagttctctca 8255487  T
Q  265 aat 267  Q
    |||    
T  8255488 aat 8255490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 11745740 - 11745658
Alignment:
Q  151 aactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaac 233  Q
    ||||||||||  || | |||| || ||||||||||||||||||||  ||| ||||| || ||||| |||||||||||||||||    
T  11745740 aactgttttcccattagctataagctgtttttataagctatcctagtgagcttatgaaactaagctgaaaacaacttataaac 11745658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 258
Target Start/End: Original strand, 13459561 - 13459734
Alignment:
Q  84 ttttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgttttta 183  Q
    ||||||| | |||||||||| || | ||| | ||||||||||||| | | |||||||||| ||| ||| || |||  |||||| |||| ||||||||| |    
T  13459561 ttttgcagcgtatagcataagcaattatgtataagctatttctatgataaaagataaaatgaagtcaa-ctttttgtgtataagctataagttgttttca 13459659  T
Q  184 taagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
    |||   |||||| |||| ||||| ||||| || |||||||  |||| || || ||||||  ||||||||||||||    
T  13459660 taaatcatcctacagagcttatgaaaataggctgaaaacagtttatgaaaatgtcataagctgttttcataagtt 13459734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 20672757 - 20672823
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataa 242  Q
    |||||||||||||||||||  |||| ||||| |||||||| ||||||| ||||| ||||| ||||||    
T  20672757 tgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataa 20672823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 34080389 - 34080311
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcct 194  Q
    ||||||||||| ||||| |||||||||| ||| |||||||||  ||||||| |||| || |||||| ||| ||||||||    
T  34080389 aagctatttctttaacaaaagataaaatgaagtcaaactgttaccgtataagctataagctgttttcatacgctatcct 34080311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 29169160 - 29169115
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaa 221  Q
    ||||||| |||| |||||| ||||||||||||||||||||||||||    
T  29169160 tgtttttgtaagttatcctgaagagtttatggaaataagccgaaaa 29169115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 39866860 - 39866744
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaa-ctgttttcgtataatctattagttgtttt--tataagctatcctaaagagtttatggaaata 212  Q
    ||||||| ||||||||| |||||||||| ||| |||| |||||||| || || |||| | |||||||  ||||||||||| | ||||| ||||| |||||    
T  39866860 aagctatctctataacaaaagataaaataaagtcaaaactgttttcataaaaactataaattgttttcatataagctatcttgaagagcttatgaaaata 39866761  T
Q  213 agccgaaaacaacttat 229  Q
    | | ||||||| |||||    
T  39866760 aactgaaaacagcttat 39866744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 1470979 - 1470867
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||||||||| | |||||||||| ||| |||| |  |||| ||||| |||| || |||||| |||| ||||| | || |||||| | |||||||     
T  1470979 aagctatttctataataaaagataaaataaagtcaaattactttcatataagctataagctgttttcataacctatcatgaaaagtttaggaaaataaga 1470880  T
Q  216 cgaaaacaactta 228  Q
     ||||||||||||    
T  1470879 tgaaaacaactta 1470867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 3269646 - 3269706
Alignment:
Q  121 atttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttt 181  Q
    ||||||||||||||||||||||| ||| | || || ||| ||||||||||| |||||||||    
T  3269646 atttctataacacaagataaaataaagtcgaattgattttgtataatctataagttgtttt 3269706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 229
Target Start/End: Original strand, 8062321 - 8062389
Alignment:
Q  161 gtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    |||||| |||| || |||||| |||||||||| || |||| |||||||||||||| ||||||| |||||    
T  8062321 gtataagctataagctgttttcataagctatcttagagagattatggaaataagctgaaaacatcttat 8062389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 31705073 - 31705145
Alignment:
Q  157 tttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    |||| ||||| |||| || |||||| ||||||| ||||  ||||||||||||||||||| ||||||| |||||    
T  31705073 tttcatataagctataagctgttttcataagctgtccttgagagtttatggaaataagctgaaaacagcttat 31705145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 33714352 - 33714241
Alignment:
Q  122 tttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaa 221  Q
    |||||||||||||||||||||| ||| |||||| |||| ||| ||||||| || | |||| ||||||||||    |||| ||||  |||||||| |||||    
T  33714352 tttctataacacaagataaaataaagtcaaactatttt-gtacaatctataagctattttcataagctatctgggagagcttataaaaataagctgaaaa 33714254  T
Q  222 caacttataaaca 234  Q
    || ||||| ||||    
T  33714253 cagcttatgaaca 33714241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 2458622 - 2458547
Alignment:
Q  183 ataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
    ||||||||||||| |||| |||||||||||| | ||||||| ||||| |||||  |||||  ||| ||||||||||    
T  2458622 ataagctatcctagagagcttatggaaataaactgaaaacagcttatgaacatgccataagctgtcttcataagtt 2458547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 2492923 - 2493002
Alignment:
Q  156 ttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacat 235  Q
    ||||||| |||||| | ||||| ||||||||| | ||||  || ||||||||||||||||  |||||||||||| |||||    
T  2492923 ttttcgtttaatctgtaagttgcttttataagttgtcctggagggtttatggaaataagcaaaaaacaacttatgaacat 2493002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 26215443 - 26215494
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataat 167  Q
    ||||||||||||||||| |||||||||| |||  ||||| ||||||||||||    
T  26215443 aagctatttctataacaaaagataaaataaagttaaactattttcgtataat 26215494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 27465320 - 27465367
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgta 163  Q
    |||||||||||||| || |||||||||||||  |||||||||||||||    
T  27465320 aagctatttctatagcaaaagataaaatcaaatcaaactgttttcgta 27465367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 27754403 - 27754502
Alignment:
Q  168 ctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaat 267  Q
    |||| ||| ||||| |||||||||  |  |||| ||||| |||||||| |||  |||||||||| ||| ||||||| |||||||||||||| || |||||    
T  27754403 ctataagtggttttcataagctattttggagagcttatgaaaataagctgaacgcaacttataatcatgtcataaactgttttcataagttctcccaaat 27754502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 33209343 - 33209268
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctat 191  Q
    |||||||||||||||   |||||||||| ||| | |||||||||| ||||| |||| || | ||||||||||||||    
T  33209343 aagctatttctataatgaaagataaaataaagtcgaactgttttcatataaactataagctatttttataagctat 33209268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 39561664 - 39561557
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||||||||||| |  ||||||| ||| | |  ||||||| | ||| |||| |||||||||  ||||||||| | || || ||||||||||||||    
T  39561664 aagctatttctataacaaagtataaaataaagtcgatttgttttcatctaaactataagttgttttcgtaagctatcatgaaaagcttatggaaataagc 39561565  T
Q  216 cgaaaaca 223  Q
     |||||||    
T  39561564 tgaaaaca 39561557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 255
Target Start/End: Complemental strand, 41620402 - 41620275
Alignment:
Q  128 taacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaactt 227  Q
    ||||| |||||||||| ||| |||| | | ||| |||| ||||  || ||||||||||||||||| |   ||| || || |||||||| |||||||||||    
T  41620402 taacaaaagataaaataaagtcaaattatgttcatatattctaaaagctgtttttataagctatcttgtcgagcttttgaaaataagcggaaaacaactt 41620303  T
Q  228 ataaacatttcataaattgttttcataa 255  Q
    ||  |||| |||||| |||||| |||||    
T  41620302 atggacatgtcataatttgtttccataa 41620275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 43704468 - 43704366
Alignment:
Q  149 caaactgttttcgtataatctattagttgtttttata--agctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattg 246  Q
    |||||||||||| ||||| |||| ||||||||| |||  || |||||| || || ||||||||||||||  ||||||  |||| ||||| |||||| |||    
T  43704468 caaactgttttcatataaactataagttgttttcataagagttatcctcaaaagcttatggaaataagcttaaaacagtttatgaacatgtcataagttg 43704369  T
Q  247 ttt 249  Q
    |||    
T  43704368 ttt 43704366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 7424688 - 7424734
Alignment:
Q  208 aaataagccgaaaacaacttataaacatttcataaattgttttcata 254  Q
    ||||||||| |||||||||||||||||| |||||| ||||| |||||    
T  7424688 aaataagcccaaaacaacttataaacatgtcataatttgttctcata 7424734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 8799356 - 8799430
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcct 194  Q
    ||||||||||||| |||||||||| ||| |||||| ||| |  ||||  ||| || |||||||||||||||||||    
T  8799356 tatttctataacaaaagataaaataaagtcaaactatttccagataaattataaggtgtttttataagctatcct 8799430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 10437837 - 10437934
Alignment:
Q  121 atttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    |||||||||||| |||||||||| ||| |||||||||||  ||||| || | ||| | ||| |||||||||| |  |||| |||| |||||||||||||    
T  10437837 atttctataacaaaagataaaataaagtcaaactgtttt-atataagctttaagtaggtttcataagctatcttcgagagcttatagaaataagccgaa 10437934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 230
Target Start/End: Original strand, 13652162 - 13652276
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||||||| || |||||  ||| |||  ||| ||||||| |||||  ||| | ||||||||||||||||| ||  |||| ||| |||||||||     
T  13652162 aagctatttctatagcaaaagatggaatgaagtgaaattgttttcatataagttataaattgtttttataagctattctggagagcttaaggaaataagt 13652261  T
Q  216 cgaaaacaacttata 230  Q
     ||||||| ||||||    
T  13652262 agaaaacagcttata 13652276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 230
Target Start/End: Original strand, 13710805 - 13710919
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    |||||||||||||| || |||||  ||| |||  ||| ||||||| |||||  ||| | ||||||||||||||||| ||  |||| ||| |||||||||     
T  13710805 aagctatttctatagcaaaagatggaatgaagtgaaattgttttcatataagttataaattgtttttataagctattctggagagcttaaggaaataagt 13710904  T
Q  216 cgaaaacaacttata 230  Q
     ||||||| ||||||    
T  13710905 agaaaacagcttata 13710919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 258
Target Start/End: Original strand, 34849020 - 34849193
Alignment:
Q  85 tttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttat 184  Q
    |||||| | ||||||||||||||| ||||| ||| ||||||| |  ||||||||||||| ||| || | | |||| ||||||  ||| || |||| | ||    
T  34849020 tttgcagcttatagcataaacact-atgaataagatatttcttttgcacaagataaaataaagtcacattatttttgtataagatataagctgttatcat 34849118  T
Q  185 aagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaa-ttgttttcataagtt 258  Q
    ||||| || |  |||  |||||||||| ||| ||||||  ||||| ||||| ||||||| |||||||||| ||||    
T  34849119 aagctttcttgtagaacttatggaaatcagctgaaaacggcttatgaacatgtcataaagttgttttcattagtt 34849193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 41606953 - 41606891
Alignment:
Q  189 tatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttc 251  Q
    ||||||| |||| |||||||||||||| ||||||||||| | ||||| ||||||  |||||||    
T  41606953 tatcctagagagcttatggaaataagctgaaaacaacttttgaacatgtcataagctgttttc 41606891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 44865647 - 44865589
Alignment:
Q  156 ttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataag 214  Q
    ||||| ||||| |||| || || ||||||||||||| ||| ||||||||||||||||||    
T  44865647 ttttcatataagctataagctggttttataagctatactagagagtttatggaaataag 44865589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 222
Target Start/End: Complemental strand, 3537154 - 3537046
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttt--tataagctatcctaaagagtttatggaaataa 213  Q
    |||| ||||||||| || |||||||||| ||| |||| ||||||||||||| ||||  |||||| |  |||||| |||| |  |||  ||||||||||||    
T  3537154 aagcaatttctatagcaaaagataaaataaagtcaaattgttttcgtataagctataggttgttatcatataagatatcttggagaacttatggaaataa 3537055  T
Q  214 gccgaaaac 222  Q
    || ||||||    
T  3537054 gctgaaaac 3537046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 249
Target Start/End: Original strand, 7714197 - 7714322
Alignment:
Q  124 tctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaaca 223  Q
    ||||||||| |||||||||| ||||  | |||||||| ||| | |||| ||||||||| || ||||||| |  |||| | ||| |||||||  |||||||    
T  7714197 tctataacaaaagataaaataaaggtgagctgttttcatatcaactataagttgttttcatgagctatcttggagagctcatgaaaataagttgaaaaca 7714296  T
Q  224 acttataaacatttcataaattgttt 249  Q
     || ||  ||||||||||| ||||||    
T  7714297 gctcatcgacatttcataagttgttt 7714322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 8629504 - 8629553
Alignment:
Q  217 gaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    ||||||||||||| | ||| |||||| ||||||||||||||| |||||||    
T  8629504 gaaaacaacttatgatcatgtcataagttgttttcataagttctctcaaa 8629553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 11813207 - 11813086
Alignment:
Q  137 ataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatt 236  Q
    ||||||| || | ||||||||| | |||||| ||| |  |||||| |||||||||| | ||||| |||  ||||||||| ||||||| | |||  | ||     
T  11813207 ataaaataaaagaaaactgtttccatataatttataatctgttttcataagctatcttcaagagcttacagaaataagctgaaaacagcctatggatatg 11813108  T
Q  237 tcataaattgttttcataagtt 258  Q
    ||||||||||||| ||||||||    
T  11813107 tcataaattgtttccataagtt 11813086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 16163436 - 16163375
Alignment:
Q  81 ttattttgcaacatatagcataaacactaatgaaaaagctatttctataacacaagataaaa 142  Q
    |||||||||| | |||||||||| |||| ||| | ||||||||||||||||  |||||||||    
T  16163436 ttattttgcagcctatagcataaccacttatgtataagctatttctataactaaagataaaa 16163375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 25869308 - 25869263
Alignment:
Q  197 agagtttatggaaataagccgaaaacaacttataaacatttcataa 242  Q
    ||||||||||||||||||| |||||||||||||  |||| ||||||    
T  25869308 agagtttatggaaataagctgaaaacaacttatggacatgtcataa 25869263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 30013166 - 30013270
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagc 215  Q
    ||||||||| ||||||| ||| | |||| ||| |||||||||| | ||||| |||| || |||||| ||||||||||||  |||  | ||||||||||||    
T  30013166 aagctattt-tataacaaaaggtcaaattaagtcaaactgtttccatataagctataagctgttttcataagctatcctgtagaactaatggaaataagc 30013264  T
Q  216 cgaaaa 221  Q
     |||||    
T  30013265 tgaaaa 30013270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 30259147 - 30259212
Alignment:
Q  202 ttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaat 267  Q
    |||||||||||| | |||||||||||||| |||| ||||||  ||||| |||||| | ||||||||    
T  30259147 ttatggaaataaactgaaaacaacttatagacatatcataagctgtttccataagctctctcaaat 30259212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 30918141 - 30918209
Alignment:
Q  197 agagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    |||| |||||||||||||| ||||||||||||| || || ||| || ||||||||||||| | |||||||    
T  30918141 agagcttatggaaataagctgaaaacaacttatgaa-atgtcacaagttgttttcataagctctctcaaa 30918209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 37776781 - 37776712
Alignment:
Q  162 tataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataa 231  Q
    ||||| |||| ||||||||  || ||| ||| | |||||||||||||||||||| || ||||||||||||    
T  37776781 tataaactataagttgtttacatcagcaatcttgaagagtttatggaaataagctgataacaacttataa 37776712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 41336763 - 41336650
Alignment:
Q  121 atttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaa 220  Q
    |||| ||| ||| ||||||||||  || |||| ||||||| ||||| |||  | ||||||| ||||||||||    |||| ||  |||||||||| ||||    
T  41336763 atttttatgacaaaagataaaatatagtcaaattgttttcatataaactagaacttgttttcataagctatctaggagagcttgcggaaataagctgaaa 41336664  T
Q  221 acaacttataaaca 234  Q
    ||||||||||||||    
T  41336663 acaacttataaaca 41336650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 42215182 - 42215086
Alignment:
Q  138 taaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacat 235  Q
    |||||| ||| |||| ||||||||||| |||||| | |  |||| |||||||||| |  |||| ||||| |||||||| ||||||||||||| |||||    
T  42215182 taaaataaagtcaaattgttttcgtatcatctataaata-ttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatgaacat 42215086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 256
Target Start/End: Complemental strand, 43368756 - 43368683
Alignment:
Q  183 ataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 256  Q
    ||||||| |||||||||||| ||| |||||||  ||||| | || || ||||| |||||| |||||||||||||    
T  43368756 ataagctgtcctaaagagttcatgaaaataagttgaaaatagctaatgaacatgtcataagttgttttcataag 43368683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 208
Target Start/End: Original strand, 4763869 - 4763957
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatgga 208  Q
    |||||| | |||| |||||||||| ||  ||||| ||||||  |||| |||| || ||||||| ||||||||||| ||||| |||||||    
T  4763869 tatttcgacaacaaaagataaaataaattcaaaccgttttcacataagctataagctgtttttctaagctatcctgaagagcttatgga 4763957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 10079184 - 10079136
Alignment:
Q  118 gctatttctataacacaagataaaatcaaggcaaactgttttcgtataa 166  Q
    ||||||||||| | | |||||||||| ||| ||||||||||||||||||    
T  10079184 gctatttctatgataaaagataaaatgaagtcaaactgttttcgtataa 10079136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 27119962 - 27119910
Alignment:
Q  206 ggaaataagccgaaaacaacttataaacatttcataaattgttttcataagtt 258  Q
    |||||||||| |||||||||||||| |||| |||| | | |||||||||||||    
T  27119962 ggaaataagctgaaaacaacttatagacatgtcattagtggttttcataagtt 27119910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 30389106 - 30389170
Alignment:
Q  176 tgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcat 240  Q
    |||||| ||||||| ||||| |||  ||||| |||||||| ||||||||||||| ||||| ||||    
T  30389106 tgttttcataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaacatgtcat 30389170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 30628025 - 30627929
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaata 212  Q
    ||||||||||| ||||| |||||||||| ||   ||| |||||  || ||| |||| ||||||||| ||||| |||| || |||| |||||||||||    
T  30628025 aagctatttctgtaacaaaagataaaataaaataaaattgtttatgtgtaagctataagttgttttcataagttatcttagagagcttatggaaata 30627929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 32841022 - 32840966
Alignment:
Q  203 tatggaaataagccgaaaacaacttataaac-atttcataaattgttttcataagtt 258  Q
    |||| |||||||| ||||||||||||| ||| || |||||| |||||||||||||||    
T  32841022 tatgaaaataagctgaaaacaacttatgaacaatgtcataagttgttttcataagtt 32840966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 42370417 - 42370377
Alignment:
Q  183 ataagctatcctaaagagtttatggaaataagccgaaaaca 223  Q
    |||||||||| | |||||||||||||||||||| |||||||    
T  42370417 ataagctatcatgaagagtttatggaaataagctgaaaaca 42370377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 188
Target Start/End: Original strand, 42597348 - 42597420
Alignment:
Q  116 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagc 188  Q
    ||||||||||||||||| |||||||||| |||  ||| ||||||| |  || |||| ||||||||| ||||||    
T  42597348 aagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttcataagc 42597420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 258
Target Start/End: Complemental strand, 160092 - 159954
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccga 218  Q
    ||||| ||||| || |||||||||| ||| |||||||  | | |||||  ||| || |||||| |||||||||||||||||| || ||||||||||| ||    
T  160092 ctattcctatagcaaaagataaaataaagtcaaactgaat-catataagttataagatgttttcataagctatcctaaagagcttgtggaaataagctga 159994  T
Q  219 aaacaacttataaacatttcataaattgttttcataagtt 258  Q
    ||||  |||||| |||| ||||||| ||||| ||| ||||    
T  159993 aaactgcttatagacatgtcataaactgtttccattagtt 159954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 27527 - 27637
Alignment:
Q  120 tatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccgaa 219  Q
    ||||||||||||| |||||||||| ||| |||| ||||||| ||||| |||| ||||||||| |||| ||||| |    ||  | ||||||||||| |||    
T  27527 tatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcataaactatcttggtaagcgtgtggaaataagctgaa 27626  T
Q  220 aacaacttata 230  Q
    |||||||||||    
T  27627 aacaacttata 27637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 20129 - 20197
Alignment:
Q  119 ctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataag 187  Q
    |||||||||||||  |||||||||| ||| ||||| ||| || ||||| |||||||||||||| |||||    
T  20129 ctatttctataaccaaagataaaataaagtcaaacagttatcatataagctattagttgttttcataag 20197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 143183 - 143109
Alignment:
Q  117 agctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatc 192  Q
    ||||||||||||||||||||||||||| | | ||||||| ||| |||||| |||| || || ||| ||||||||||    
T  143183 agctatttctataacacaagataaaataatgtcaaactgcttt-gtataacctataagctgatttcataagctatc 143109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 266
Target Start/End: Complemental strand, 10656 - 10590
Alignment:
Q  200 gtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 266  Q
    |||||||||||||||| |||||||||||||  |||| |||| | |||||| |||||| ||| |||||    
T  10656 gtttatggaaataagctgaaaacaacttatggacatgtcattagttgtttacataagctttgtcaaa 10590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 32756 - 32818
Alignment:
Q  178 tttttataagctatcctaaagagtttatggaaataagccgaaaacaacttataaacatttcat 240  Q
    |||||||||||||||||| ||||||||| ||||||||  |||||| | |||| ||||| ||||    
T  32756 tttttataagctatcctacagagtttatagaaataagttgaaaaccaattattaacatgtcat 32818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 255
Target Start/End: Complemental strand, 4344 - 4207
Alignment:
Q  119 ctatttctataacaca-agataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctaaagagtttatggaaataagccg 217  Q
    |||||||||||| | | ||||||||| ||| ||||| |||||| ||||| |||| || |||||| ||||||||| ||| | || ||| ||||| |||       
T  4344 ctatttctataaaaaagagataaaataaagtcaaaccgttttcatataaactataagctgttttaataagctatgctagaaagcttacggaaacaagatt 4245  T
Q  218 aaaacaacttataaacatttcataaattgttttcataa 255  Q
    ||||||||||||  ||| | ||||| |||||| |||||    
T  4244 aaaacaacttattgacaatgcataagttgtttccataa 4207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 306330 - 306386
Alignment:
Q  173 agttgtttttataagctatcctaaagagtttatggaaataagccgaaaacaacttat 229  Q
    ||||||||| ||||||||||||| |||| ||||| || ||||| ||||||| |||||    
T  306330 agttgttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttat 306386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University