View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12718_low_23 (Length: 229)
Name: NF12718_low_23
Description: NF12718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12718_low_23 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 159; Significance: 8e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 67 - 229
Target Start/End: Complemental strand, 48365442 - 48365280
Alignment:
| Q |
67 |
atagtggtagaaaatggaagaaacaaaaatcctctctattactactaattagtgcatatatgtattaccaataagagtggtaaaatcatggtcaattttc |
166 |
Q |
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| T |
48365442 |
atagtggtagaaaatggaagaaacaaaaatcctctctattactactaattagtgcatatatgtattaccaataagagtggtaaaatcatggtcaattttc |
48365343 |
T |
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| Q |
167 |
ataaaatttacacttaagaattttacaaaatcacggattattgtaattttgtcaaagtcaatc |
229 |
Q |
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| T |
48365342 |
ataaaatttacactttagaattttacaaaatcacggattattgtaattttgtcaaagtcaatc |
48365280 |
T |
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