View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12718_low_4 (Length: 487)
Name: NF12718_low_4
Description: NF12718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12718_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 445; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 18 - 485
Target Start/End: Original strand, 25135151 - 25135621
Alignment:
| Q |
18 |
aggtacgacgagactgaagcaacagaaactttttgcaatgacaaaaaccacgacgtgactgcaaagtaaccttgttcatgatttaaaaccttgattcaaa |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25135151 |
aggtacgacgagactgaagcaacagaaactttttgcaatgacaaaaaccacgacgtgactgcaaagtaaccttgttcatgatttaaaaccttgattcaaa |
25135250 |
T |
|
| Q |
118 |
tatacacttccctcatcatttcaccctggtatattctcatatttctcaactacaatataaaaactagcacatgtctgaaacttgccattccagaagaaag |
217 |
Q |
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| T |
25135251 |
tatacacttccctcatcatttcaccctggtatattctcatatttctcaactacaatataaaaactagcacatgtctgaaacttgccattccagaagaaag |
25135350 |
T |
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| Q |
218 |
atttaacaaagataatttcctaagaatttgattcctcttgtatgattttgacatttgcaagttgatgaatttgatacctttactctgcaaattacatttt |
317 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |
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| T |
25135351 |
atttaacaaagataatttcctaagaatttgattcctcttgtatgattttgacatttgcaagttgatgaattcgatacctttactctacaaattacatttt |
25135450 |
T |
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| Q |
318 |
cagtgacatacatgatacatgataatgcattatggtgcctgatgcttttatggtgaatgatgta---ccaaccttatctatgcaggatagccgaggcagc |
414 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
25135451 |
cagtgacatacatgatacatgataatgcattatggtgcctgatgcttttatggtgaatgatgtatgcccaaccttatctatgcaggatagccgaggcagc |
25135550 |
T |
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| Q |
415 |
aggtatatgtcctgtttgtcgtaggaacatgaagaaggtgaggagaatttttactgtttgatctgtgctcc |
485 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
25135551 |
aggtatatgtcctgtttgtcgtaggaacatgaagaaggtgaggagaatttttactgtttgatcagtgctcc |
25135621 |
T |
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