View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12719_high_11 (Length: 265)
Name: NF12719_high_11
Description: NF12719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12719_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 9412536 - 9412421
Alignment:
| Q |
132 |
tgacccaacttcaactgttgttgatgagtagtttcttaaactttaaactactaatatacaaggttttgaattgtggctgtggaaactgttgcaatcattg |
231 |
Q |
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| T |
9412536 |
tgacgcaacttcaactgttgttcatgagtagtttcttaaactataaactactaatatccaaggttttgaattgtggctgtggatactattgcaatcattg |
9412437 |
T |
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| Q |
232 |
atattgcagagaatca |
247 |
Q |
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|||||||||||||||| |
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| T |
9412436 |
atattgcagagaatca |
9412421 |
T |
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