View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12719_low_20 (Length: 222)

Name: NF12719_low_20
Description: NF12719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12719_low_20
NF12719_low_20
[»] scaffold0676 (1 HSPs)
scaffold0676 (1-222)||(1860-2081)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-222)||(8643-8864)
scaffold0004 (126-211)||(2107-2192)
[»] scaffold0863 (1 HSPs)
scaffold0863 (1-214)||(4276-4489)
[»] chr7 (9 HSPs)
chr7 (8-211)||(13131215-13131418)
chr7 (32-80)||(2712654-2712702)
chr7 (32-80)||(8009110-8009158)
chr7 (32-80)||(9089048-9089096)
chr7 (32-80)||(11009000-11009048)
chr7 (32-80)||(24737916-24737964)
chr7 (32-80)||(26397137-26397185)
chr7 (32-80)||(26692782-26692830)
chr7 (32-80)||(40049145-40049193)
[»] scaffold0594 (1 HSPs)
scaffold0594 (20-222)||(3884-4086)
[»] scaffold0379 (1 HSPs)
scaffold0379 (5-214)||(1390-1599)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-214)||(6613-6825)
[»] chr8 (12 HSPs)
chr8 (1-202)||(20378544-20378744)
chr8 (1-222)||(17263173-17263394)
chr8 (9-203)||(24648725-24648919)
chr8 (24-95)||(22526816-22526887)
chr8 (32-80)||(245642-245690)
chr8 (32-80)||(808762-808810)
chr8 (32-80)||(3355626-3355674)
chr8 (32-80)||(9344933-9344981)
chr8 (32-80)||(13695561-13695609)
chr8 (32-80)||(29080225-29080273)
chr8 (32-80)||(36296756-36296804)
chr8 (32-80)||(44484947-44484995)
[»] chr5 (21 HSPs)
chr5 (1-214)||(92758-92970)
chr5 (60-202)||(23434130-23434272)
chr5 (60-202)||(23445497-23445639)
chr5 (126-206)||(21613498-21613578)
chr5 (32-80)||(6982886-6982934)
chr5 (32-80)||(9343034-9343082)
chr5 (32-80)||(14037121-14037169)
chr5 (32-80)||(14561787-14561835)
chr5 (32-80)||(22683197-22683245)
chr5 (32-80)||(23303358-23303406)
chr5 (32-80)||(23369015-23369063)
chr5 (32-80)||(23703859-23703907)
chr5 (32-80)||(24574152-24574200)
chr5 (32-80)||(24591795-24591843)
chr5 (32-80)||(24814993-24815041)
chr5 (32-80)||(24820609-24820657)
chr5 (32-80)||(27467241-27467289)
chr5 (32-80)||(30231160-30231208)
chr5 (32-80)||(36586249-36586297)
chr5 (32-80)||(39494619-39494667)
chr5 (32-80)||(42049859-42049907)
[»] scaffold0396 (1 HSPs)
scaffold0396 (1-141)||(10443-10583)
[»] scaffold0084 (1 HSPs)
scaffold0084 (134-206)||(41774-41846)
[»] scaffold0810 (1 HSPs)
scaffold0810 (24-203)||(726-905)
[»] chr3 (18 HSPs)
chr3 (132-214)||(12954746-12954828)
chr3 (126-202)||(17220169-17220245)
chr3 (32-80)||(4747551-4747599)
chr3 (32-80)||(5543977-5544025)
chr3 (32-80)||(5872657-5872705)
chr3 (32-80)||(11279356-11279404)
chr3 (32-80)||(12244514-12244562)
chr3 (32-80)||(12293146-12293194)
chr3 (32-80)||(13125522-13125570)
chr3 (32-80)||(14469452-14469500)
chr3 (32-80)||(16426115-16426163)
chr3 (32-80)||(23761129-23761177)
chr3 (32-80)||(24390475-24390523)
chr3 (32-80)||(24663702-24663750)
chr3 (32-80)||(28321194-28321242)
chr3 (32-80)||(38198603-38198651)
chr3 (32-80)||(39375917-39375965)
chr3 (32-80)||(41687481-41687529)
[»] scaffold0203 (1 HSPs)
scaffold0203 (155-202)||(23638-23685)
[»] chr1 (5 HSPs)
chr1 (20-202)||(36137832-36138014)
chr1 (32-80)||(7511047-7511095)
chr1 (32-80)||(36243433-36243481)
chr1 (32-80)||(38098860-38098908)
chr1 (32-80)||(51652877-51652925)
[»] chr2 (8 HSPs)
chr2 (1-214)||(18941639-18941852)
chr2 (32-80)||(9769737-9769785)
chr2 (32-80)||(9904547-9904595)
chr2 (32-80)||(10270774-10270822)
chr2 (32-80)||(11402150-11402198)
chr2 (32-80)||(27225218-27225266)
chr2 (32-80)||(39177072-39177120)
chr2 (32-80)||(43349191-43349239)
[»] scaffold0217 (1 HSPs)
scaffold0217 (125-206)||(10663-10744)
[»] scaffold0324 (1 HSPs)
scaffold0324 (156-196)||(11518-11558)
[»] scaffold0133 (1 HSPs)
scaffold0133 (32-80)||(34948-34996)
[»] scaffold0105 (1 HSPs)
scaffold0105 (32-80)||(43951-43999)
[»] chr6 (8 HSPs)
chr6 (32-80)||(3665214-3665262)
chr6 (32-80)||(12723804-12723852)
chr6 (32-80)||(16952793-16952841)
chr6 (32-80)||(25791502-25791550)
chr6 (32-80)||(26029207-26029255)
chr6 (32-80)||(26868590-26868638)
chr6 (32-80)||(27376580-27376628)
chr6 (32-80)||(27466937-27466985)
[»] chr4 (5 HSPs)
chr4 (32-80)||(454411-454459)
chr4 (32-80)||(10747558-10747606)
chr4 (32-80)||(10961327-10961375)
chr4 (32-80)||(27660459-27660507)
chr4 (32-80)||(36022137-36022185)


Alignment Details
Target: scaffold0676 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 1860 - 2081
Alignment:
Q  1 acctgatttcagtgcatttaaatggttctaaacccatttcttctcttgactttccctccatagtaggatcaatcagaatcttctatgtttcctccagctt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1860 acctgatttcagtgcatttaaatggttctaaacccatttcttctcttgactttccctccatagtaggatcaatcagaatcttctctgtttcctccagctt 1959  T
Q  101 tacaacattcttgtcatacatatgcgctctgacccagaagtgcctaacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagacct 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1960 tacaacattcttgtcatacatatgcgctctaacccagaagtgcctaacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagacct 2059  T
Q  201 tgtgctccgtagtaccctctga 222  Q
    |||||| |||||||||||||||    
T  2060 tgtgcttcgtagtaccctctga 2081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 8864 - 8643
Alignment:
Q  1 acctgatttcagtgcatttaaatggttctaaacccatttcttctcttgactttccctccatagtaggatcaatcagaatcttctatgtttcctccagctt 100  Q
    |||||||||||||||||  |||||||||||| ||||||||||| |  || |||||||||||||| ||||||||||||||||||| |||||| || | | |    
T  8864 acctgatttcagtgcatacaaatggttctaaccccatttcttcacgagattttccctccatagttggatcaatcagaatcttctctgtttcttctaacct 8765  T
Q  101 tacaacattcttgtcatacatatgcgctctgacccagaagtgcctaacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagacct 200  Q
    | || ||||||||||||| | ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8764 tgcatcattcttgtcataaacatgtgctctaacccagaagtgcctcacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagacct 8665  T
Q  201 tgtgctccgtagtaccctctga 222  Q
    | |||| ||||||| |||||||    
T  8664 tatgcttcgtagtatcctctga 8643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 2107 - 2192
Alignment:
Q  126 gctctgacccagaagtgcctaacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagaccttgtgctccgta 211  Q
    ||||| |||||||| ||||||| ||| |||||||||||| ||||||| ||||| ||||| || |||||||||||||| ||| ||||    
T  2107 gctcttacccagaactgcctaataagagtcttgtatgttagaccatttaacatattgaactaatccatgagaccttgagcttcgta 2192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0863 (Bit Score: 122; Significance: 9e-63; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 4489 - 4276
Alignment:
Q  1 acctgatttcagtgcatttaaatggttctaaacccatttcttctcttgactttccctccatagtaggatcaatcagaatcttctatgtttcctccagctt 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| | ||||| |||| ||||||||||||||||||||||| |||||||||||||||    
T  4489 acctgatttcagtgcatttaaatggttctaaaccaatttcttctctttattttccttccaaagtaggatcaatcagaatcttctctgtttcctccagctt 4390  T
Q  101 tacaacattcttgtcatacatatgcgctctgacccagaagtgcctaacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagacct 200  Q
      || |||| |||||||||| |||| |||| ||| |||||| ||| ||||| || |  ||||||||||||||||||||||||||||| ||||| ||||||    
T  4389 agcagcatttttgtcatacacatgcactcttacctagaagttcctgacaagagtttgatatgttggaccattcaacatcttgaagtactccattagacct 4290  T
Q  201 tgtgctccgtagta 214  Q
    |||||| |||||||    
T  4289 tgtgcttcgtagta 4276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 1e-49; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 8 - 211
Target Start/End: Complemental strand, 13131418 - 13131215
Alignment:
Q  8 ttcagtgcatttaaatggttctaaacccatttcttctcttgactttccctccatagtaggatcaatcagaatcttctatgtttcctccagctttacaaca 107  Q
    ||||||||||  ||| |||||||||||||||||||||||||| ||||| |||| |||||||||||||||||| |||| |||||||||||||||   |  |    
T  13131418 ttcagtgcatacaaaaggttctaaacccatttcttctcttgattttccttccaaagtaggatcaatcagaattttctctgtttcctccagcttagtagta 13131319  T
Q  108 ttcttgtcatacatatgcgctctgacccagaagtgcctaacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagaccttgtgctc 207  Q
    || |||||||||| |||  |||| ||||||||||| || |||||||| |  |||||||| |||||||||||||||||||||||||| ||||||||||||     
T  13131318 tttttgtcatacacatgttctcttacccagaagtgtctcacaagtgtttgatatgttgggccattcaacatcttgaagtattccattagaccttgtgctt 13131219  T
Q  208 cgta 211  Q
    ||||    
T  13131218 cgta 13131215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 2712702 - 2712654
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  2712702 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 2712654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 8009158 - 8009110
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  8009158 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 8009110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 9089048 - 9089096
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  9089048 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 9089096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 11009000 - 11009048
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  11009000 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 11009048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 24737916 - 24737964
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  24737916 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 24737964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 26397185 - 26397137
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  26397185 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 26397137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 26692830 - 26692782
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  26692830 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 26692782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 40049193 - 40049145
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  40049193 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 40049145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 222
Target Start/End: Complemental strand, 4086 - 3884
Alignment:
Q  20 aaatggttctaaacccatttcttctcttgactttccctccatagtaggatcaatcagaatcttctatgtttcctccagctttacaacattcttgtcatac 119  Q
    ||||||||||||||||||||||||||  || ||||| ||||| ||||||||||||||||||||||  ||||| || | |||| || ||||||||||||||    
T  4086 aaatggttctaaacccatttcttctcgagattttccttccatggtaggatcaatcagaatcttctcagtttcttctaactttgcagcattcttgtcatac 3987  T
Q  120 atatgcgctctgacccagaagtgcctaacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagaccttgtgctccgtagtaccctc 219  Q
    | ||||||||| || || ||||| || |||   || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||| ||||    
T  3986 acatgcgctctaacacataagtgtctgacataagttttgtatgttggaccattcaacatcttgaagtactccatgagaccttgtgcttcgtcgtaacctc 3887  T
Q  220 tga 222  Q
    |||    
T  3886 tga 3884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 214
Target Start/End: Original strand, 1390 - 1599
Alignment:
Q  5 gatttcagtgcatttaaatggttctaaacccatttcttctcttgactttccctccatagtaggatcaatcagaatcttctatgtttcctccagctttaca 104  Q
    |||||||||||||  |||||||||||||||||||||||||||| | ||||| ||||  |||||||||||||||||||||| | ||||||| | |||  |     
T  1390 gatttcagtgcatacaaatggttctaaacccatttcttctcttaattttccttccaatgtaggatcaatcagaatcttctctatttcctctaacttagct 1489  T
Q  105 acattcttgtcatacatatgcgctctgacccagaagtgcctaacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagaccttgtg 204  Q
     || | || ||||||| ||| ||||||||||||||||| || ||| |||| |  |||||| ||||||||| ||| ||||| |||||||  ||||||||||    
T  1490 tcagttttatcatacacatgtgctctgacccagaagtgtctcacaggtgtttgatatgttcgaccattcagcattttgaaatattccaatagaccttgtg 1589  T
Q  205 ctccgtagta 214  Q
    || |||||||    
T  1590 cttcgtagta 1599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 6613 - 6825
Alignment:
Q  1 acctgatttcagtgcatttaaatggttctaaacccatttcttctcttgactttccctccatagtaggatcaatcagaatcttctatgtttcctccagctt 100  Q
    |||||||||| |||||  |||||| ||||||||||||||||||||  || ||||| ||||||||||||||||||| ||||||||   |||| || | |||    
T  6613 acctgatttctgtgcaagtaaatg-ttctaaacccatttcttctcgagattttccttccatagtaggatcaatcaaaatcttctccatttcttctaactt 6711  T
Q  101 tacaacattcttgtcatacatatgcgctctgacccagaagtgcctaacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagacct 200  Q
    |  |   ||||||||||||| ||||||||| ||| | |||||||| ||||| || |||||||||||||||||||||||||| ||||| | |||||||||     
T  6712 tgtagttttcttgtcatacacatgcgctctaaccaataagtgcctgacaagagttttgtatgttggaccattcaacatcttaaagtactgcatgagaccg 6811  T
Q  201 tgtgctccgtagta 214  Q
    ||| || |||||||    
T  6812 tgtacttcgtagta 6825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 20378744 - 20378544
Alignment:
Q  1 acctgatttcagtgcatttaaatggttctaaacccatttcttctcttgactttccctccatagtaggatcaatcagaatcttctatgtttcctccagctt 100  Q
    ||||||||||  ||||  ||||||||||||||||||||||||||| ||| ||||| ||||  ||||||||||||| || ||| | | |||| |||| |||    
T  20378744 acctgatttctctgcaagtaaatggttctaaacccatttcttctcgtgattttccttccaaggtaggatcaatcaaaa-cttttctatttcttccaactt 20378646  T
Q  101 tacaacattcttgtcatacatatgcgctctgacccagaagtgcctaacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagacct 200  Q
      || | ||||| ||||| | ||||||||| ||| |||||||||| ||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||    
T  20378645 agcagccttcttatcataaacatgcgctctaaccaagaagtgcctgacaagagtcttgtatgttgcaccattcaacattttgaagtactccatgagacct 20378546  T
Q  201 tg 202  Q
    ||    
T  20378545 tg 20378544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 17263173 - 17263394
Alignment:
Q  1 acctgatttcagtgcatttaaatggttctaaacccatttcttctcttgactttccctccatagtaggatcaatcagaatcttctatgtttcctccagctt 100  Q
    |||||||||| || ||| |||||||||| |||||||||||||||  ||| ||||| ||||  ||||||||||||| ||  |||| | |||| ||||||      
T  17263173 acctgatttctgtccatgtaaatggttccaaacccatttcttcttgtgattttccttccagggtaggatcaatcaaaactttctctatttcttccagcag 17263272  T
Q  101 tacaacattcttgtcatacatatgcgctctgacccagaagtgcctaacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagacct 200  Q
      || | ||| | || || | |||||||||||||||||||||||| ||||| |||||||||||||| |||||| |||| |||||||||||||| ||||||    
T  17263273 agcagccttcatatcgtaaacatgcgctctgacccagaagtgcctgacaagggtcttgtatgttgggccattctacattttgaagtattccataagacct 17263372  T
Q  201 tgtgctccgtagtaccctctga 222  Q
    || ||| ||||||  |||||||    
T  17263373 tgagcttcgtagttgcctctga 17263394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 203
Target Start/End: Original strand, 24648725 - 24648919
Alignment:
Q  9 tcagtgcatttaaatggttctaaacccatttcttctcttgactttccctccatagtaggatcaatcagaatcttctatgtttcctccagctttacaacat 108  Q
    ||||||||| | || |||||||| ||| ||||||||||||| || || ||||  |||||||||||| ||||||||| |||||||||||||||  || |||    
T  24648725 tcagtgcatctgaacggttctaagcccgtttcttctcttgatttaccttccaatgtaggatcaatctgaatcttctctgtttcctccagcttagcagcat 24648824  T
Q  109 tcttgtcatacatatgcgctctgacccagaagtgcctaacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagaccttgt 203  Q
      || |||| || |||  | || |||||||| ||||| ||||| |   ||||||||||||||||||||||||||||| | ||||| | |||||||    
T  24648825 gtttatcatccacatgtacccttacccagaattgccttacaagagatgtgtatgttggaccattcaacatcttgaagaaatccattaaaccttgt 24648919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 22526887 - 22526816
Alignment:
Q  24 ggttctaaacccatttcttctcttgactttccctccatagtaggatcaatcagaatcttctatgtttcctcc 95  Q
    |||||||| |||| ||| |||||||| || || ||||  ||||||||||||||||||||||  |||||||||    
T  22526887 ggttctaagcccaattcatctcttgatttaccttccaatgtaggatcaatcagaatcttctcagtttcctcc 22526816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 245642 - 245690
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  245642 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 245690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 808762 - 808810
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  808762 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 808810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 3355674 - 3355626
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  3355674 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 3355626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 9344933 - 9344981
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  9344933 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 9344981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 13695609 - 13695561
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  13695609 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 13695561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 29080225 - 29080273
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  29080225 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 29080273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 36296756 - 36296804
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  36296756 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 36296804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 44484947 - 44484995
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  44484947 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 44484995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 92970 - 92758
Alignment:
Q  1 acctgatttcagtgcatttaaatggttctaaacccatttcttctcttgactttccctccatagtaggatcaatcagaatcttctatgtttcctccagctt 100  Q
    |||||||||| |||||| |||||||||  |||||| ||||||||||||| || || |||||||||||||||||||| || |||| |||||| ||||  ||    
T  92970 acctgatttctgtgcatgtaaatggtttcaaaccc-tttcttctcttgatttcccttccatagtaggatcaatcaggattttctctgtttcttccaattt 92872  T
Q  101 tacaacattcttgtcatacatatgcgctctgacccagaagtgcctaacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagacct 200  Q
      || | ||| |||| || | ||| ||||| ||||| || ||| | |  || |||||||||||||||||||||||||| | |||||| ||||||||||||    
T  92871 agcagccttcctgtcgtagacatgtgctcttacccataaatgcatgatgagagtcttgtatgttggaccattcaacatttcgaagtaatccatgagacct 92772  T
Q  201 tgtgctccgtagta 214  Q
    |||||| |||||||    
T  92771 tgtgcttcgtagta 92758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 202
Target Start/End: Complemental strand, 23434272 - 23434130
Alignment:
Q  60 atagtaggatcaatcagaatcttctatgtttcctccagctttacaacattcttgtcatacatatgcgctctgacccagaagtgcctaacaagtgtcttgt 159  Q
    ||||||||||||||||| || || | || ||| |||| |||  || | || |||||||| | ||| ||||| ||||| || | ||||||||  |||||||    
T  23434272 atagtaggatcaatcaggattttatctgcttcttccaccttagcagctttattgtcataaacatgtgctctaacccataaattcctaacaatagtcttgt 23434173  T
Q  160 atgttggaccattcaacatcttgaagtattccatgagaccttg 202  Q
    | ||||||||||||| ||  |||||||||||||||||||||||    
T  23434172 aagttggaccattcagcaatttgaagtattccatgagaccttg 23434130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 202
Target Start/End: Complemental strand, 23445639 - 23445497
Alignment:
Q  60 atagtaggatcaatcagaatcttctatgtttcctccagctttacaacattcttgtcatacatatgcgctctgacccagaagtgcctaacaagtgtcttgt 159  Q
    ||||||||||||||||| || || | || ||| |||| |||  || | || |||||||| | ||| ||||| ||||| || | ||||||||  |||||||    
T  23445639 atagtaggatcaatcaggattttatctgcttcttccaccttagcagctttattgtcataaacatgtgctctaacccataaattcctaacaatagtcttgt 23445540  T
Q  160 atgttggaccattcaacatcttgaagtattccatgagaccttg 202  Q
    | ||||||||||||| ||  |||||||||||||||||||||||    
T  23445539 aagttggaccattcagcaatttgaagtattccatgagaccttg 23445497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 21613578 - 21613498
Alignment:
Q  126 gctctgacccagaagtgcctaacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagaccttgtgct 206  Q
    ||||| ||| |||||||||| || ||||| |  |||||||| ||||||||||| |||||||| ||||| || |||||||||    
T  21613578 gctctaaccaagaagtgccttaccagtgtttgatatgttggtccattcaacatattgaagtaatccattaggccttgtgct 21613498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 6982934 - 6982886
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  6982934 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 6982886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 9343082 - 9343034
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  9343082 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 9343034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 14037169 - 14037121
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  14037169 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 14037121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 14561787 - 14561835
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  14561787 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 14561835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 22683245 - 22683197
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  22683245 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 22683197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 23303406 - 23303358
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  23303406 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 23303358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 23369063 - 23369015
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  23369063 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 23369015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 23703907 - 23703859
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  23703907 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 23703859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 24574200 - 24574152
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  24574200 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 24574152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 24591795 - 24591843
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  24591795 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 24591843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 24815041 - 24814993
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  24815041 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 24814993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 24820609 - 24820657
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  24820609 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 24820657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 27467289 - 27467241
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  27467289 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 27467241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 30231160 - 30231208
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  30231160 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 30231208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 36586249 - 36586297
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  36586249 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 36586297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 39494619 - 39494667
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  39494619 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 39494667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 42049907 - 42049859
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  42049907 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 42049859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 10583 - 10443
Alignment:
Q  1 acctgatttcagtgcatttaaatggttctaaacccatttcttctcttgactttccctccatagtaggatcaatcagaatcttctatgtttcctccagctt 100  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||||| ||||| |||| |||||||||||| ||||| |||| | |||||||||||||    
T  10583 acctgatttcagtgcatacaaatggttctaaacctatttcttctcttgattttccttccaaagtaggatcaattagaattttctctatttcctccagctt 10484  T
Q  101 tacaacattcttgtcatacatatgcgctctgacccagaagt 141  Q
       | |||| |||||||||| ||| ||||| ||||||||||    
T  10483 agtagcatttttgtcatacacatgtgctcttacccagaagt 10443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 41774 - 41846
Alignment:
Q  134 ccagaagtgcctaacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagaccttgtgct 206  Q
    ||||||||| |||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  41774 ccagaagtgtctaacaagtgccttgtatgttggaccattcaacatattgaagtaatccatgagaccttgtgct 41846  T

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Target: scaffold0810 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 203
Target Start/End: Complemental strand, 905 - 726
Alignment:
Q  24 ggttctaaacccatttcttctcttgactttccctccatagtaggatcaatcagaatcttctatgtttcctccagctttacaacattcttgtcatacatat 123  Q
    |||||||| ||||||||||||||||| || || ||||  ||||||| ||||| |||||| | ||||||||| |||||  || |||  || ||| ||| ||    
T  905 ggttctaagcccatttcttctcttgatttaccttccaatgtaggattaatcataatcttttctgtttcctcaagcttagcagcatgtttatcaaacacat 806  T
Q  124 gcgctctgacccagaagtgcctaacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagaccttgt 203  Q
    | || || |||||||| ||||| ||||| |   |||||||||||| ||||| |||||||||||| ||||| | |||||||    
T  805 gtgcccttacccagaaatgccttacaagagatgtgtatgttggactattcagcatcttgaagtaatccattaaaccttgt 726  T

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Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 12954828 - 12954746
Alignment:
Q  132 acccagaagtgcctaacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagaccttgtgctccgtagta 214  Q
    ||||| ||||||||||  || |||||||||||||||||||||| ||| ||||| || |||||||||||||| ||| |||||||    
T  12954828 acccataagtgcctaatgagagtcttgtatgttggaccattcagcattttgaaatactccatgagaccttgagcttcgtagta 12954746  T

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Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 17220245 - 17220169
Alignment:
Q  126 gctctgacccagaagtgcctaacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagaccttg 202  Q
    ||||| ||||| || |||||||||||  ||||||| ||| ||||||||||||| |||||||| ||||| ||||||||    
T  17220245 gctctaacccaaaaatgcctaacaaggctcttgtaagttagaccattcaacatgttgaagtaatccataagaccttg 17220169  T

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Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 4747551 - 4747599
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  4747551 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 4747599  T

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Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 5544025 - 5543977
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  5544025 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 5543977  T

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Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 5872705 - 5872657
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  5872705 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 5872657  T

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Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 11279404 - 11279356
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  11279404 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 11279356  T

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Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 12244562 - 12244514
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  12244562 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 12244514  T

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Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 12293194 - 12293146
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  12293194 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 12293146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 13125522 - 13125570
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| || ||||||||||||||||    
T  13125522 acccatttcttctctggtttttccctccaaagaaggatcaatcagaatc 13125570  T

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Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 14469452 - 14469500
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| || ||||||||||||||||    
T  14469452 acccatttcttctctggtttttccctccaaagaaggatcaatcagaatc 14469500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 16426163 - 16426115
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  16426163 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 16426115  T

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Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 23761129 - 23761177
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  23761129 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 23761177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 24390523 - 24390475
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  24390523 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 24390475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 24663702 - 24663750
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  24663702 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 24663750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 28321242 - 28321194
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  28321242 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 28321194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 38198603 - 38198651
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  38198603 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 38198651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 39375917 - 39375965
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  39375917 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 39375965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 41687481 - 41687529
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  41687481 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 41687529  T

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Target: scaffold0203 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 23685 - 23638
Alignment:
Q  155 cttgtatgttggaccattcaacatcttgaagtattccatgagaccttg 202  Q
    |||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  23685 cttgtaggttggaccattcaacatgttgaagtaatccatgagaccttg 23638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.00000000008; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 36137832 - 36138014
Alignment:
Q  20 aaatggttctaaacccatttcttctcttgactttccctccatagtaggatcaatcagaatcttctatgtttcctccagctttacaacattcttgtcatac 119  Q
    ||||||||||||||||||||||||    || |||||||||| ||||||||||||||| | ||| | || ||| |||| |||  || | |  ||||| ||     
T  36137832 aaatggttctaaacccatttcttcatgagattttccctccaaagtaggatcaatcagtaccttttctgcttcttccaccttagcaccttctttgtcgtag 36137931  T
Q  120 atatgcgctctgacccagaagtgcctaacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagaccttg 202  Q
    | |   ||||| |||||||||||||| || || || |  |||||||| ||||||||||| |||||||| || ||||| |||||    
T  36137932 acacttgctctaacccagaagtgccttacgagcgtttgatatgttggtccattcaacatattgaagtaatctatgaggccttg 36138014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 7511047 - 7511095
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  7511047 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 7511095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 36243481 - 36243433
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  36243481 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 36243433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 38098860 - 38098908
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  38098860 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 38098908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 51652925 - 51652877
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  51652925 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 51652877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 31; Significance: 0.00000002; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 18941639 - 18941852
Alignment:
Q  1 acctgatttcagtgcatttaaatggttctaaacccatttcttctcttgactttccctccatagtaggatcaatcagaatcttctatgtttcctccagctt 100  Q
    ||||||||||||||||| | |||||||  | |||||||||||| || || ||||| |  | || | ||||| |||  |||||||  ||||| ||||||||    
T  18941639 acctgatttcagtgcatctgaatggtttcagacccatttcttccctagattttccttgtagagcatgatcactcaatatcttctcagtttcttccagctt 18941738  T
Q  101 tacaacattcttgtcatacatatgcgctctgacccagaagtgcct-aacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagacc 199  Q
      |  ||||| ||||||| | ||||| ||| ||||| |||||| | | |||| |||||||||||||| |||| |||||  |||||||| ||||  |||||    
T  18941739 ggctgcattcctgtcatagacatgcgttcttacccataagtgcttgatcaag-gtcttgtatgttggcccatacaacaaattgaagtactccaaaagacc 18941837  T
Q  200 ttgtgctccgtagta 214  Q
    | || || |||||||    
T  18941838 tagtacttcgtagta 18941852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 9769785 - 9769737
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| || ||||||||||||||||    
T  9769785 acccatttcttctctggtttttccctccaaagaaggatcaatcagaatc 9769737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 9904595 - 9904547
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  9904595 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 9904547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 10270774 - 10270822
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  10270774 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 10270822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 11402198 - 11402150
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  11402198 acccatttcttctctagtttttccctccaaagtaggatcaaccagaatc 11402150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 27225218 - 27225266
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  27225218 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 27225266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 39177120 - 39177072
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  39177120 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 39177072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 43349191 - 43349239
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  43349191 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 43349239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 206
Target Start/End: Original strand, 10663 - 10744
Alignment:
Q  125 cgctctgacccagaagtgcctaacaagtgtcttgtatgttggaccattcaacatcttgaagtattccatgagaccttgtgct 206  Q
    |||||| |||||||||||||| || ||||| |  |||||||| | ||||||||| ||||| || ||||| || |||||||||    
T  10663 cgctctaacccagaagtgccttaccagtgtttgatatgttggtcgattcaacatattgaaataatccattaggccttgtgct 10744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 11518 - 11558
Alignment:
Q  156 ttgtatgttggaccattcaacatcttgaagtattccatgag 196  Q
    ||||| ||||||||||||| |||||||||||| ||||||||    
T  11518 ttgtaggttggaccattcagcatcttgaagtaatccatgag 11558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 34948 - 34996
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  34948 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 34996  T

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Target: scaffold0105 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 43999 - 43951
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  43999 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 43951  T

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Target: chr6 (Bit Score: 29; Significance: 0.0000003; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 3665214 - 3665262
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  3665214 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 3665262  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 12723852 - 12723804
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  12723852 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 12723804  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 16952793 - 16952841
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  16952793 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 16952841  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 25791502 - 25791550
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  25791502 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 25791550  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 26029207 - 26029255
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  26029207 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 26029255  T

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Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 26868590 - 26868638
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  26868590 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 26868638  T

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Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 27376580 - 27376628
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  27376580 acccatttcttctctggtttttccctccagagtaggatcaaccagaatc 27376628  T

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Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 27466937 - 27466985
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  27466937 acccatttcttctctggtttttccctccagagtaggatcaaccagaatc 27466985  T

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Target: chr4 (Bit Score: 29; Significance: 0.0000003; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 454411 - 454459
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    |||||||||||||||||  ||||| |||| ||||||||||| |||||||    
T  454411 acccatttcttctcttgtttttccttccaaagtaggatcaaccagaatc 454459  T

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Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 10747606 - 10747558
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  10747606 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 10747558  T

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Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 10961375 - 10961327
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  10961375 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 10961327  T

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Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 27660459 - 27660507
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  27660459 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 27660507  T

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Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 36022137 - 36022185
Alignment:
Q  32 acccatttcttctcttgactttccctccatagtaggatcaatcagaatc 80  Q
    ||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  36022137 acccatttcttctctggtttttccctccaaagtaggatcaaccagaatc 36022185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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