View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12719_low_3 (Length: 450)

Name: NF12719_low_3
Description: NF12719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12719_low_3
NF12719_low_3
[»] chr6 (39 HSPs)
chr6 (278-444)||(1703698-1703864)
chr6 (15-208)||(1703935-1704122)
chr6 (44-196)||(17334888-17335041)
chr6 (39-196)||(4984356-4984514)
chr6 (39-196)||(17237075-17237233)
chr6 (39-196)||(35001720-35001878)
chr6 (44-191)||(16892610-16892758)
chr6 (39-196)||(8027907-8028065)
chr6 (39-196)||(12059562-12059720)
chr6 (39-196)||(12653074-12653232)
chr6 (65-161)||(20226001-20226097)
chr6 (65-161)||(22119985-22120081)
chr6 (39-166)||(33110741-33110869)
chr6 (18-197)||(8196195-8196376)
chr6 (54-196)||(25064381-25064524)
chr6 (39-196)||(4088590-4088748)
chr6 (12-196)||(16419260-16419446)
chr6 (12-196)||(7975994-7976180)
chr6 (44-196)||(8497102-8497256)
chr6 (65-160)||(30608360-30608455)
chr6 (39-197)||(33740366-33740525)
chr6 (58-120)||(3688715-3688777)
chr6 (39-196)||(28634902-28635060)
chr6 (39-109)||(30879614-30879684)
chr6 (60-106)||(31852092-31852138)
chr6 (143-196)||(7875833-7875886)
chr6 (65-109)||(67897-67941)
chr6 (18-109)||(33053064-33053155)
chr6 (46-203)||(24590475-24590635)
chr6 (143-196)||(7880891-7880944)
chr6 (143-196)||(34489436-34489489)
chr6 (52-97)||(35086249-35086294)
chr6 (66-162)||(546182-546278)
chr6 (65-109)||(9341547-9341591)
chr6 (39-166)||(10228809-10228937)
chr6 (69-109)||(21426582-21426622)
chr6 (18-106)||(23128721-23128809)
chr6 (45-196)||(25337701-25337853)
chr6 (65-97)||(29743147-29743179)
[»] chr7 (45 HSPs)
chr7 (16-209)||(43369550-43369743)
chr7 (39-196)||(7640564-7640722)
chr7 (44-196)||(34773846-34773999)
chr7 (39-196)||(26583839-26583998)
chr7 (12-123)||(30756701-30756812)
chr7 (39-196)||(433480-433638)
chr7 (44-196)||(2843030-2843183)
chr7 (45-196)||(20083474-20083626)
chr7 (65-118)||(9977097-9977150)
chr7 (44-196)||(26492500-26492653)
chr7 (28-196)||(35261416-35261585)
chr7 (65-124)||(13796810-13796869)
chr7 (65-160)||(28407763-28407858)
chr7 (65-196)||(34899413-34899547)
chr7 (65-160)||(47590462-47590557)
chr7 (99-197)||(6002218-6002316)
chr7 (39-196)||(23085651-23085809)
chr7 (39-196)||(23786705-23786863)
chr7 (39-196)||(32684798-32684956)
chr7 (39-196)||(45198822-45198980)
chr7 (44-196)||(20116717-20116869)
chr7 (40-196)||(46822146-46822303)
chr7 (65-109)||(8001442-8001486)
chr7 (28-160)||(19404602-19404734)
chr7 (65-109)||(28044652-28044696)
chr7 (65-198)||(35664940-35665075)
chr7 (74-194)||(36143910-36144030)
chr7 (52-108)||(46244149-46244205)
chr7 (65-109)||(48316708-48316752)
chr7 (38-97)||(4999937-4999996)
chr7 (137-196)||(23425162-23425221)
chr7 (69-124)||(25255382-25255437)
chr7 (65-196)||(40993308-40993442)
chr7 (146-196)||(17611629-17611679)
chr7 (143-197)||(21609457-21609511)
chr7 (39-196)||(42066851-42067009)
chr7 (143-196)||(1485045-1485098)
chr7 (69-162)||(11343964-11344057)
chr7 (18-190)||(13592305-13592477)
chr7 (39-72)||(14627793-14627826)
chr7 (65-109)||(24069290-24069334)
chr7 (65-109)||(39171486-39171530)
chr7 (28-108)||(46700149-46700229)
chr7 (65-109)||(48061573-48061617)
chr7 (45-109)||(49148011-49148075)
[»] chr4 (54 HSPs)
chr4 (18-191)||(36184653-36184826)
chr4 (39-196)||(9528666-9528824)
chr4 (39-196)||(25274025-25274183)
chr4 (39-196)||(38706499-38706657)
chr4 (45-197)||(4821064-4821217)
chr4 (44-196)||(50766301-50766454)
chr4 (45-196)||(12265610-12265761)
chr4 (39-190)||(44947554-44947706)
chr4 (43-118)||(49072632-49072707)
chr4 (39-196)||(4644000-4644158)
chr4 (39-196)||(51318127-51318285)
chr4 (53-196)||(46990920-46991064)
chr4 (54-196)||(1532065-1532208)
chr4 (38-196)||(10359338-10359496)
chr4 (28-182)||(21090273-21090428)
chr4 (66-157)||(27652113-27652204)
chr4 (39-191)||(37188389-37188542)
chr4 (65-162)||(42032372-42032469)
chr4 (40-196)||(43444535-43444692)
chr4 (12-191)||(35964770-35964950)
chr4 (52-115)||(26123416-26123479)
chr4 (57-198)||(3335951-3336093)
chr4 (44-197)||(9645312-9645466)
chr4 (39-196)||(34024227-34024385)
chr4 (18-196)||(43153806-43153983)
chr4 (16-118)||(43318153-43318255)
chr4 (39-196)||(45227830-45227988)
chr4 (40-196)||(9284054-9284211)
chr4 (12-109)||(19853408-19853505)
chr4 (92-197)||(29966522-29966627)
chr4 (44-196)||(53616439-53616592)
chr4 (12-109)||(53811144-53811241)
chr4 (65-109)||(6155119-6155163)
chr4 (65-109)||(9178522-9178566)
chr4 (44-191)||(47417809-47417957)
chr4 (65-109)||(56040542-56040586)
chr4 (60-123)||(7008871-7008934)
chr4 (18-77)||(28834159-28834218)
chr4 (65-108)||(29120276-29120319)
chr4 (34-196)||(52097705-52097868)
chr4 (65-115)||(22305511-22305561)
chr4 (143-189)||(31381512-31381558)
chr4 (66-124)||(36194878-36194936)
chr4 (65-127)||(37684026-37684088)
chr4 (65-107)||(45418681-45418723)
chr4 (143-197)||(49680777-49680831)
chr4 (143-196)||(20569504-20569557)
chr4 (57-182)||(21364950-21365075)
chr4 (69-162)||(31891130-31891223)
chr4 (39-195)||(56199238-56199395)
chr4 (65-109)||(32766683-32766727)
chr4 (65-109)||(37465651-37465695)
chr4 (39-127)||(40068752-40068840)
chr4 (65-109)||(47320308-47320352)
[»] chr8 (53 HSPs)
chr8 (18-189)||(33298970-33299142)
chr8 (16-172)||(27746928-27747084)
chr8 (36-187)||(8441319-8441470)
chr8 (54-196)||(44099725-44099868)
chr8 (44-196)||(4809106-4809259)
chr8 (44-190)||(2656012-2656159)
chr8 (65-160)||(28086655-28086750)
chr8 (65-124)||(29617153-29617212)
chr8 (65-124)||(34609987-34610046)
chr8 (39-196)||(32724270-32724428)
chr8 (44-196)||(14906712-14906865)
chr8 (143-196)||(19876440-19876493)
chr8 (143-196)||(28240083-28240136)
chr8 (44-196)||(43889913-43890066)
chr8 (55-190)||(23851289-23851425)
chr8 (65-121)||(25238475-25238531)
chr8 (38-196)||(33342570-33342728)
chr8 (44-189)||(11464313-11464459)
chr8 (39-196)||(11725817-11725975)
chr8 (39-196)||(29777356-29777514)
chr8 (65-196)||(15344459-15344594)
chr8 (65-196)||(15433524-15433659)
chr8 (65-196)||(15524828-15524963)
chr8 (143-196)||(17427014-17427067)
chr8 (143-196)||(17430664-17430717)
chr8 (12-109)||(31013502-31013599)
chr8 (99-196)||(33896284-33896381)
chr8 (44-196)||(34611946-34612099)
chr8 (65-109)||(9637303-9637347)
chr8 (65-109)||(18890593-18890637)
chr8 (65-109)||(23230794-23230838)
chr8 (65-109)||(27110359-27110403)
chr8 (45-160)||(24186504-24186619)
chr8 (39-94)||(35812797-35812852)
chr8 (66-109)||(41896669-41896712)
chr8 (3-109)||(20553135-20553241)
chr8 (143-198)||(21238017-21238074)
chr8 (39-124)||(42447888-42447974)
chr8 (39-124)||(44578167-44578253)
chr8 (18-131)||(3673545-3673658)
chr8 (143-196)||(9072960-9073013)
chr8 (99-196)||(9619146-9619243)
chr8 (12-109)||(10377787-10377884)
chr8 (99-176)||(11197081-11197158)
chr8 (65-118)||(29939451-29939504)
chr8 (44-196)||(37565668-37565821)
chr8 (18-174)||(43192158-43192315)
chr8 (65-162)||(43833837-43833934)
chr8 (65-190)||(7198006-7198133)
chr8 (66-106)||(17427093-17427133)
chr8 (66-106)||(17430743-17430783)
chr8 (65-109)||(33214565-33214609)
chr8 (112-196)||(35141672-35141756)
[»] chr2 (53 HSPs)
chr2 (39-196)||(27949560-27949718)
chr2 (39-196)||(8806000-8806158)
chr2 (38-196)||(30923264-30923422)
chr2 (39-196)||(21570197-21570355)
chr2 (40-196)||(15690537-15690694)
chr2 (45-196)||(9986131-9986283)
chr2 (18-196)||(41712578-41712758)
chr2 (12-196)||(20046871-20047057)
chr2 (65-124)||(4904027-4904086)
chr2 (66-141)||(7604336-7604411)
chr2 (52-190)||(10548333-10548470)
chr2 (55-196)||(41431178-41431320)
chr2 (65-163)||(41694780-41694877)
chr2 (65-162)||(17248991-17249088)
chr2 (99-196)||(40625846-40625943)
chr2 (39-196)||(4228256-4228415)
chr2 (44-190)||(8971423-8971570)
chr2 (12-131)||(10929771-10929890)
chr2 (65-160)||(11985079-11985174)
chr2 (65-131)||(1421835-1421901)
chr2 (12-195)||(83971-84156)
chr2 (12-109)||(7646584-7646681)
chr2 (28-109)||(22538204-22538285)
chr2 (44-196)||(27248940-27249093)
chr2 (74-195)||(39284354-39284475)
chr2 (66-162)||(10237060-10237156)
chr2 (12-88)||(13141591-13141667)
chr2 (36-76)||(34124582-34124622)
chr2 (65-160)||(7677719-7677814)
chr2 (137-196)||(13718959-13719018)
chr2 (66-209)||(24461603-24461745)
chr2 (65-124)||(28533836-28533895)
chr2 (65-124)||(32448498-32448557)
chr2 (39-109)||(33229016-33229087)
chr2 (39-196)||(7015500-7015658)
chr2 (65-162)||(19597998-19598095)
chr2 (93-131)||(32190851-32190889)
chr2 (65-163)||(33760036-33760134)
chr2 (147-196)||(8308338-8308387)
chr2 (79-124)||(8809452-8809497)
chr2 (57-182)||(23903494-23903619)
chr2 (99-196)||(30420864-30420961)
chr2 (3-160)||(31788553-31788710)
chr2 (143-196)||(36234237-36234290)
chr2 (44-196)||(38575275-38575427)
chr2 (66-162)||(3309105-3309201)
chr2 (65-109)||(9169155-9169199)
chr2 (65-109)||(12554078-12554122)
chr2 (168-196)||(15439900-15439928)
chr2 (54-90)||(18695202-18695238)
chr2 (104-196)||(21132032-21132124)
chr2 (55-159)||(29279417-29279521)
chr2 (65-109)||(34335577-34335621)
[»] scaffold0136 (1 HSPs)
scaffold0136 (47-186)||(34581-34720)
[»] chr1 (49 HSPs)
chr1 (45-196)||(5856041-5856192)
chr1 (18-196)||(38520324-38520503)
chr1 (39-196)||(9686994-9687152)
chr1 (39-196)||(45425855-45426013)
chr1 (40-197)||(50271928-50272086)
chr1 (44-196)||(19715684-19715837)
chr1 (39-196)||(51871997-51872155)
chr1 (39-195)||(5324349-5324505)
chr1 (66-196)||(47133056-47133188)
chr1 (65-156)||(31919141-31919232)
chr1 (44-189)||(50148509-50148655)
chr1 (55-196)||(50165888-50166030)
chr1 (39-196)||(51868434-51868592)
chr1 (55-196)||(799641-799780)
chr1 (44-196)||(9172629-9172782)
chr1 (44-196)||(9180611-9180764)
chr1 (99-196)||(11454132-11454229)
chr1 (44-196)||(11709496-11709649)
chr1 (44-196)||(33291207-33291360)
chr1 (44-187)||(5701398-5701542)
chr1 (65-160)||(15431511-15431606)
chr1 (50-109)||(46399107-46399166)
chr1 (39-196)||(7342856-7343014)
chr1 (65-196)||(19061061-19061194)
chr1 (55-196)||(19723463-19723605)
chr1 (47-196)||(20266444-20266594)
chr1 (39-196)||(25406073-25406231)
chr1 (65-127)||(39888334-39888396)
chr1 (38-96)||(48809127-48809185)
chr1 (79-160)||(27456650-27456731)
chr1 (143-196)||(39987657-39987710)
chr1 (65-109)||(5983988-5984032)
chr1 (66-162)||(36775553-36775649)
chr1 (65-160)||(16989523-16989618)
chr1 (55-164)||(19052155-19052264)
chr1 (43-97)||(45393267-45393321)
chr1 (40-164)||(7997924-7998049)
chr1 (52-133)||(19885150-19885231)
chr1 (12-97)||(21947526-21947611)
chr1 (143-196)||(30879314-30879367)
chr1 (53-106)||(32873763-32873816)
chr1 (65-162)||(49627065-49627162)
chr1 (65-109)||(11462378-11462422)
chr1 (65-109)||(14872791-14872835)
chr1 (65-109)||(24583298-24583342)
chr1 (65-109)||(31984313-31984357)
chr1 (65-109)||(32395150-32395194)
chr1 (66-162)||(48750338-48750434)
chr1 (65-109)||(51373754-51373798)
[»] chr5 (43 HSPs)
chr5 (39-196)||(781520-781678)
chr5 (18-197)||(11192480-11192659)
chr5 (39-189)||(27266655-27266806)
chr5 (39-97)||(19100527-19100585)
chr5 (39-196)||(19259601-19259759)
chr5 (39-196)||(34881850-34882007)
chr5 (39-196)||(35475127-35475285)
chr5 (39-196)||(42580020-42580178)
chr5 (45-196)||(15571045-15571197)
chr5 (45-196)||(20257485-20257637)
chr5 (47-195)||(24549506-24549654)
chr5 (12-160)||(34945488-34945636)
chr5 (65-153)||(37985965-37986053)
chr5 (65-124)||(41630650-41630709)
chr5 (39-196)||(4954124-4954282)
chr5 (39-196)||(7247091-7247249)
chr5 (65-166)||(28097307-28097408)
chr5 (39-190)||(3271197-3271349)
chr5 (12-160)||(38597892-38598040)
chr5 (55-196)||(7241932-7242074)
chr5 (39-196)||(18677255-18677412)
chr5 (39-196)||(21060072-21060230)
chr5 (69-131)||(32691109-32691171)
chr5 (39-196)||(43148859-43149017)
chr5 (58-166)||(7612877-7612986)
chr5 (60-109)||(31078315-31078364)
chr5 (46-91)||(31802367-31802412)
chr5 (146-191)||(37483287-37483332)
chr5 (12-196)||(13007324-13007511)
chr5 (65-109)||(14082292-14082336)
chr5 (18-109)||(15571587-15571679)
chr5 (46-109)||(9762349-9762412)
chr5 (52-202)||(11768144-11768295)
chr5 (39-196)||(30298976-30299134)
chr5 (99-197)||(43008103-43008201)
chr5 (52-109)||(8514548-8514605)
chr5 (99-196)||(8771970-8772067)
chr5 (143-196)||(27752162-27752215)
chr5 (18-131)||(35920870-35920983)
chr5 (53-165)||(13468744-13468856)
chr5 (66-166)||(19983176-19983276)
chr5 (65-109)||(24229680-24229724)
chr5 (65-109)||(26825578-26825622)
[»] chr3 (49 HSPs)
chr3 (66-209)||(35175553-35175698)
chr3 (53-209)||(22803171-22803328)
chr3 (44-196)||(25162568-25162721)
chr3 (39-209)||(30648495-30648666)
chr3 (44-196)||(36906254-36906407)
chr3 (18-196)||(25631315-25631495)
chr3 (65-160)||(43017036-43017131)
chr3 (42-196)||(44907188-44907343)
chr3 (44-196)||(3848708-3848861)
chr3 (44-196)||(12116230-12116383)
chr3 (52-120)||(19862213-19862281)
chr3 (39-196)||(46934769-46934924)
chr3 (12-196)||(628730-628916)
chr3 (137-196)||(6823413-6823472)
chr3 (39-189)||(39917195-39917345)
chr3 (65-160)||(44959818-44959913)
chr3 (15-160)||(4711580-4711725)
chr3 (44-196)||(17237937-17238090)
chr3 (40-196)||(32607597-32607754)
chr3 (83-196)||(35498989-35499102)
chr3 (66-196)||(50194142-50194274)
chr3 (65-109)||(9797430-9797474)
chr3 (66-162)||(16235575-16235671)
chr3 (65-156)||(19619861-19619952)
chr3 (65-160)||(21533654-21533749)
chr3 (66-109)||(27706122-27706165)
chr3 (66-149)||(42455676-42455759)
chr3 (65-160)||(45568290-45568385)
chr3 (18-97)||(46322223-46322302)
chr3 (99-182)||(51628951-51629034)
chr3 (66-160)||(7448759-7448853)
chr3 (66-160)||(7456901-7456995)
chr3 (39-109)||(26275715-26275785)
chr3 (143-196)||(38440380-38440433)
chr3 (18-190)||(46178674-46178847)
chr3 (49-130)||(47176038-47176119)
chr3 (65-162)||(53807701-53807798)
chr3 (66-162)||(8914861-8914957)
chr3 (65-109)||(9998615-9998659)
chr3 (65-109)||(10108384-10108428)
chr3 (65-109)||(10229624-10229668)
chr3 (65-109)||(10233218-10233262)
chr3 (65-109)||(21313184-21313228)
chr3 (84-196)||(24396305-24396417)
chr3 (65-109)||(38860008-38860052)
chr3 (65-109)||(42460897-42460941)
chr3 (41-124)||(42719646-42719730)
chr3 (65-109)||(48650630-48650674)
chr3 (66-162)||(51923876-51923972)
[»] scaffold0003 (1 HSPs)
scaffold0003 (12-196)||(361588-361774)
[»] scaffold0009 (1 HSPs)
scaffold0009 (66-196)||(57895-58027)
[»] scaffold0113 (1 HSPs)
scaffold0113 (137-189)||(36486-36538)
[»] scaffold0445 (1 HSPs)
scaffold0445 (65-160)||(1493-1588)
[»] scaffold0049 (1 HSPs)
scaffold0049 (69-160)||(71145-71236)
[»] scaffold0039 (1 HSPs)
scaffold0039 (58-196)||(53207-53345)
[»] scaffold0146 (1 HSPs)
scaffold0146 (44-196)||(16109-16262)
[»] scaffold0050 (1 HSPs)
scaffold0050 (65-109)||(65938-65982)
[»] scaffold0347 (1 HSPs)
scaffold0347 (65-131)||(6179-6245)
[»] scaffold0443 (1 HSPs)
scaffold0443 (143-196)||(4440-4493)
[»] scaffold0372 (1 HSPs)
scaffold0372 (57-182)||(9474-9599)
[»] scaffold0088 (1 HSPs)
scaffold0088 (12-109)||(50872-50969)
[»] scaffold0022 (1 HSPs)
scaffold0022 (99-196)||(83226-83322)
[»] scaffold0017 (1 HSPs)
scaffold0017 (3-124)||(32628-32749)
[»] scaffold0495 (1 HSPs)
scaffold0495 (39-166)||(5528-5656)
[»] scaffold0026 (1 HSPs)
scaffold0026 (65-109)||(71766-71810)


Alignment Details
Target: chr6 (Bit Score: 159; Significance: 2e-84; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 278 - 444
Target Start/End: Complemental strand, 1703864 - 1703698
Alignment:
Q  278 cagataatgatgcactgtacattacttttattgatttcctagacatatttataaagagggaaaaaagataaacacctttgacctgaaaatagatttcacc 377  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1703864 cagataatgatgcactgtacattacttatattgatttcctagacatatttataaagagggaaaaaagataaacacctttgacctgaaaatagatttcacc 1703765  T
Q  378 ataacaggataaataataaatttattatatttacgaaattaataacattaaataaggtctctgcttc 444  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1703764 ataaaaggataaataataaatttattatatttacgaaattaataacattaaataaggtctctgcttc 1703698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 15 - 208
Target Start/End: Complemental strand, 1704122 - 1703935
Alignment:
Q  15 acatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatg 114  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1704122 acatcaacgttgtagatccggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatg 1704023  T
Q  115 ttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatattgatttaatttt 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||      ||||||||||||||| |||||||||    
T  1704022 ttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatcaatc------aatgaataaatattgttttaatttt 1703935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 17334888 - 17335041
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||||||||||||||||  ||||||| | ||| ||| |||| || |||| || |||||||||||  ||||||| ||||| || ||| | | |||||     
T  17334888 atattccagtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcatt 17334987  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  17334988 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 17335041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 4984514 - 4984356
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| |||||||  ||||||||||| |||||||| | ||| ||| |||| ||| ||| || |||||||||||| ||| ||||||||| || ||| | | |    
T  4984514 catggatattccgatcactttaattttatcatatatttttgtaggcattatgttgttatatgctattaacttagatgatgtaagtttgttcgcagattca 4984415  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  4984414 tcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 4984356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 17237233 - 17237075
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||||||| ||| | || ||| | | |    
T  17237233 catggatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtgtgttcgcagattca 17237134  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  17237133 tcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 17237075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 35001720 - 35001878
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||||||||||| || ||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||||||| ||||| || ||| | | |    
T  35001720 catgaatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattaa 35001819  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | |||||||||||||||||||||||| ||||||| |  |||| ||||||| |||||    
T  35001820 tcctttacgtttttagcgatgttgaatgatgtaatcttttgatttgaatgaatgaatat 35001878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 191
Target Start/End: Complemental strand, 16892758 - 16892610
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| ||||||||||||  ||||||| | ||| ||| |||| || |||| || |||||||||||  |||| |||||||| || ||| ||| |||||     
T  16892758 atattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgtcgtaagtttgttcgcagaatcatcatt 16892659  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaata 191  Q
    ||||||||||| | |||||||||| ||||||| || |||| ||||||||    
T  16892658 tacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaata 16892610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 8028065 - 8027907
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| |||||||||||||||||||| |||||||| | ||| ||| |||| || | || || |||||||||||  ||| ||| ||||| || ||||| | |    
T  8028065 catggatattccagtcactttaattttatcatatatttttgtaggcattatgccattatatgctattaactttgatgatgtgagtttgttcgcaaattca 8027966  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||| | ||||||| || |||| ||||||| |||||    
T  8027965 tcctttacgtttttagcggtgttgaataatgtaatctctcgatttgaatgaatgaatat 8027907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 12059720 - 12059562
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatattattta-tagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||||||||||| ||||||||| |||  |||  ||| ||||||| || |||||||||||  ||||||| ||||| || ||| | | |    
T  12059720 catggatattccggtcactttaattttatcatatttttttgtaggaattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattca 12059621  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| ||||||||||  |||||| |  |||||||||||| |||||    
T  12059620 tcctttacgtttttagcggtgttgaatgatataatctcttgatttaaatgaatgaatat 12059562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 12653074 - 12653232
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| ||| |||||||| |||||||| | ||| ||  |||| || |||| || |||||||||||  ||||||| ||||| || ||| | | |    
T  12653074 catggatattccggtcgctttaattttatcatatatttttgtacgcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattca 12653173  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||||| || |||||||||||| |||||    
T  12653174 tcctgtacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaatat 12653232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 161
Target Start/End: Original strand, 20226001 - 20226097
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttg 161  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||   | |||| ||||| || ||||| | ||||| || ||||||||||||||||    
T  20226001 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtattgtgagtttgttcgcaaattcatcatttatgtttttagcgatgttg 20226097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 161
Target Start/End: Original strand, 22119985 - 22120081
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttg 161  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||   | |||| ||||| || ||||| | ||||| || ||||||||||||||||    
T  22119985 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtattgtgagtttgttcgcaaattcatcatttatgtttttagcgatgttg 22120081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 166
Target Start/End: Original strand, 33110741 - 33110869
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||||||| |||||||||||| | | |    
T  33110741 catggatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttatttgcatattca 33110840  T
Q  138 tcatctacgtttttagcgatgttgaatga 166  Q
    || | ||||||||| ||  ||||||||||    
T  33110841 tcctttacgtttttggcagtgttgaatga 33110869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 8196376 - 8196195
Alignment:
Q  18 tcaacgttatagatacggatgc-atgaatattccagtcactttaattgtatc--atattatttatagacattttgtcgttgtacgctattaacttaaatg 114  Q
    |||||||| ||||| |||| || ||| ||||||| |||||||||||| ||||  ||||| ||| ||| |||| ||||||| || |||||||||||  |||    
T  8196376 tcaacgttgtagatccggaggccatgtatattccggtcactttaattttatcgcatatt-tttgtaggcattatgtcgttatatgctattaacttggatg 8196278  T
Q  115 ttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatatt 197  Q
     ||| ||| | || ||||| | ||| | ||| ||||||||| |||||||||| ||||||| || |||| ||||||| ||||||    
T  8196277 ctgtgagtgtgttcgcaaattcatcctttacatttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatt 8196195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 25064381 - 25064524
Alignment:
Q  54 cactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgttttta 152  Q
    ||||||||||  ||||||| | ||| ||| |||| ||||||| || |||||||||||  ||||||| ||||| || ||| | | ||| | ||||||||||    
T  25064381 cactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgttttta 25064480  T
Q  153 gcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||| |||||||||| ||||||| || |||| ||||||| |||||    
T  25064481 gcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 25064524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 4088590 - 4088748
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||||||||||| |||||||| | ||| ||| |||| || |||| || || ||||||||  ||| ||| ||||| || ||| | | |    
T  4088590 catggatattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgccattaacttggatgctgtgagtttgttcgcagattca 4088689  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| ||||||||||  |||||| ||||||| ||||||| |||||    
T  4088690 tcctttacgtttttagcggtgttgaatgaaataatctctcaatttgaatgaatgaatat 4088748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 196
Target Start/End: Original strand, 16419260 - 16419446
Alignment:
Q  12 tggacatcaacgttatagatacggatgca-tgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||| ||||||||  |||| |||| ||| || ||||||| || ||||||||| |||||||| | ||| ||| |||| || |||  || |||||||||||    
T  16419260 tggacgtcaacgttgcagatccggaggcaatggatattccggtgactttaattttatcatatatttttgtaggcattatgccgtcatatgctattaactt 16419359  T
Q  110 aaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
     | |||||| ||||| || ||| | | ||| | ||||||||||||| |||||||||| ||||||| ||||||| ||| ||| |||||    
T  16419360 gattgttgtgagtttgttcgcagattcatcttttacgtttttagcggtgttgaatgatgtaatctctcaatttgaataaatgaatat 16419446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 196
Target Start/End: Complemental strand, 7976180 - 7975994
Alignment:
Q  12 tggacatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaa 111  Q
    ||||| |||||||| ||||| |||| |||||  |||||  || | || |||| |||||||   ||| ||| ||||||| ||||||| ||||||||||||     
T  7976180 tggacgtcaacgttgtagatccggaagcatgggtattctggtgatttaaattttatcataccgtttgtaggcattttgccgttgtatgctattaacttag 7976081  T
Q  112 atgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga--atgacgtaatctatcaatttaaatgaataaatat 196  Q
     |||||| ||||| || ||| | | ||| | || ||||||||| |||||||   ||| ||| ||||||||||||||||||| |||||    
T  7976080 gtgttgtgagtttgttcgcatattcatcctttatgtttttagcaatgttgattctgatgtattctatcaatttaaatgaatgaatat 7975994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 8497102 - 8497256
Alignment:
Q  44 atattccagtcactttaattgtatcatat--tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcat 141  Q
    ||||||| ||||||||||||  |||||||  | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || ||| | | ||| |    
T  8497102 atattccggtcactttaatttcatcatatattttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcct 8497201  T
Q  142 ctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
     ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  8497202 ttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 8497256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 160
Target Start/End: Complemental strand, 30608455 - 30608360
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
    ||||||||||||| ||| ||||||  ||||||| |||||||||||  ||||||| || || |||||||| | ||| | |||||||||| |||||||    
T  30608455 tatcatattatttgtaggcattttaccgttgtatgctattaacttggatgttgtgagattgtttgcaaattcatcctttacgtttttaacgatgtt 30608360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 197
Target Start/End: Complemental strand, 33740525 - 33740366
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||| | |||||||||||| |||||||| | ||||||| |||| || |||| || |||||||||||  ||  ||| ||||| || ||| | | |    
T  33740525 catggatatttcggtcactttaattttatcatatatttttataggcattatgccgttatatgctattaacttggataatgtgagtttgttcgcagattca 33740426  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatatt 197  Q
    || | ||||||||||||  |||||||||| ||||||| |  |||||||||||| ||||||    
T  33740425 tcctttacgtttttagcagtgttgaatgatgtaatctcttgatttaaatgaatgaatatt 33740366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 120
Target Start/End: Complemental strand, 3688777 - 3688715
Alignment:
Q  58 ttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaa 120  Q
    |||||| | |||||||||||||||| |||||  ||||||| ||||||| ||||||||||||||    
T  3688777 ttaattttgtcatattatttatagatattttaccgttgtatgctattatcttaaatgttgtaa 3688715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 28635060 - 28634902
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||| ||| |||||||||||| |||||| | | ||| ||| |||| || |||| || || ||||||||  ||||||| ||||| ||  || | | |    
T  28635060 catggatactccggtcactttaattttatcatgtatttttgtaggcattatgccgttatatgcgattaacttggatgttgtgagtttgttcacagattca 28634961  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | |||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  28634960 tcctttacgtttttagcgatgttgaatgatgtaacctatcgatttgaatgaatgaatat 28634902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 30879684 - 30879614
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||| ||||| ||||||| ||||||||||||||| |  ||||||||||| || | |||||||||    
T  30879684 catgaatattcaagtcattttaattttatcatattatttattggtattttgtcgttatatgttattaactt 30879614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 31852138 - 31852092
Alignment:
Q  60 aattgtatcatattatttatagacattttgtcgttgtacgctattaa 106  Q
    |||| |||||||||||||||||||||||||| |||||| ||||||||    
T  31852138 aattttatcatattatttatagacattttgttgttgtatgctattaa 31852092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 7875886 - 7875833
Alignment:
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| || |||||||||||| |||||    
T  7875886 tacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaatat 7875833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 67941 - 67897
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||||    
T  67941 tatcatattatttataggcattttgccgttgtatgctattaactt 67897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 33053155 - 33053064
Alignment:
Q  18 tcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||  |||| |||| |||||  |||| |||| |||| | || ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  33053155 tcaacgttgcagatccggaagcatgggtatttcagtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaactt 33053064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 203
Target Start/End: Complemental strand, 24590635 - 24590475
Alignment:
Q  46 attccagtcactttaattgtatcatattatt---tatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    |||||| ||||||||||| ||| ||||||||   ||||||||||||  |||||||  || ||| ||| ||| || | ||||| ||  |||| | ||  |     
T  24590635 attccaatcactttaattttattatattattatttatagacatttttccgttgtatactgttaccttgaattttttgagtttgttgacaaattcattctt 24590536  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatattgattta 203  Q
    |||||||||||||| ||| |||||| || || |||||| | ||||||||||||||| ||||    
T  24590535 tacgtttttagcgacgttcaatgacatattcaatcaatatgaatgaataaatattgtttta 24590475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 7880944 - 7880891
Alignment:
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  7880944 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 7880891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 34489436 - 34489489
Alignment:
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| | |||||| | |||||||||| |||| |||||||||||||    
T  34489436 tacgtttttagcggttttgaataatgtaatctatcgatttgaatgaataaatat 34489489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 35086294 - 35086249
Alignment:
Q  52 gtcactttaattgtatcatattatttatagacattttgtcgttgta 97  Q
    |||||||||| ||||||||||||||| ||| |||||||| ||||||    
T  35086294 gtcactttaagtgtatcatattatttgtaggcattttgttgttgta 35086249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 546182 - 546278
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 162  Q
    |||||||||||| ||| ||||||| ||||||| |||||||||||   || ||| ||||| || ||| | | ||| | ||||||||||||||| ||||    
T  546182 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctatacgtttttagcgatattga 546278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 9341591 - 9341547
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||| ||| ||| ||||||||||||||| |||||||||||    
T  9341591 tatcatattgtttgtaggcattttgtcgttgtatgctattaactt 9341547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 166
Target Start/End: Original strand, 10228809 - 10228937
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| || ||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||  ||||||||| || ||||| | |    
T  10228809 catggatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatactgtaagtttgttcgcaaattca 10228908  T
Q  138 tcatctacgtttttagcgatgttgaatga 166  Q
    || | |||||||||| || ||||||||||    
T  10228909 tcctttacgtttttaacggtgttgaatga 10228937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 21426622 - 21426582
Alignment:
Q  69 atattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||| ||||||||||| ||||||| |||||||||||    
T  21426622 atattatttgtagacattttgccgttgtatgctattaactt 21426582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 23128721 - 23128809
Alignment:
Q  18 tcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaa 106  Q
    |||||||| ||||| |||| |||||  |||| | || |||| | || ||||||||||||| ||| ||||||| ||||||| ||||||||    
T  23128721 tcaacgttgtagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaa 23128809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 196
Target Start/End: Original strand, 25337701 - 25337853
Alignment:
Q  45 tattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatct 143  Q
    |||||||||||| |||||| |||||||| | ||| ||| |||| | | ||| || | ||||||||| |||| ||||||||| || ||| | | ||||| |    
T  25337701 tattccagtcaccttaattttatcatatatttttgtaggcattatattgttatatgatattaacttgaatggtgtaagtttgttcgcacattcatcattt 25337800  T
Q  144 acgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    |  |||||||   |||| ||||| ||| ||||| ||||| |||||||||||||    
T  25337801 atatttttagtagtgttaaatgatgtactctattaatttgaatgaataaatat 25337853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 29743147 - 29743179
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgta 97  Q
    ||||||||||||||||| |||||||||||||||    
T  29743147 tatcatattatttataggcattttgtcgttgta 29743179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 1e-45; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 209
Target Start/End: Complemental strand, 43369743 - 43369550
Alignment:
Q  16 catcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgt 115  Q
    ||||||||||  |||| ||||||||||| ||||| ||||||||||||| ||||||||||||||||| ||||||| ||||||| | |||||||||  |||     
T  43369743 catcaacgttgcagatccggatgcatgagtattctagtcactttaattttatcatattatttataggcattttgccgttgtatgatattaacttgtatga 43369644  T
Q  116 tgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatattgatttaattttg 209  Q
    ||||||||| ||| |||| ||||| | |||||||| |||||| |||||||| ||||||||||||||||||||||| ||||| | |||| |||||    
T  43369643 tgtaagtttgtttacaaatttatcctttacgttttcagcgatattgaatgatgtaatctatcaatttaaatgaatgaatatcgttttatttttg 43369550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 7640722 - 7640564
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||  ||||||||||||  ||||||| | ||||||| |||| ||||||| || |||||||||||  ||||||| ||||| || ||| | | |    
T  7640722 catggatattctggtcactttaatttcatcatatatttttataggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattca 7640623  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    |||| ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  7640622 tcatttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 7640564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 34773846 - 34773999
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||||||||||||||||  ||||||| | ||| ||| |||| | ||||| ||  ||||||||||  ||| ||| ||||| |||||| | ||||| |     
T  34773846 atattccagtcactttaatttcatcatatatttttgtaggcattatatcgttatatactattaacttggatgctgtgagtttgtttgcagatttatcctt 34773945  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  34773946 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 34773999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 26583839 - 26583998
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaac-ttaaatgttgtaagtttatttgcaaaatt 136  Q
    |||||||||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || ||||||||| || |||| ||| || ||||| ||| | |     
T  26583839 catgaatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaactttgaatgctgtgagcttattcgcagattc 26583938  T
Q  137 atcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||| | |||||||||| ||||||||||||| |||||||  | |||| ||||||| |||||    
T  26583939 atcctttacgtttttaacgatgttgaatgatgtaatctcacgatttgaatgaatgaatat 26583998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 30756812 - 30756701
Alignment:
Q  12 tggacatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaa 111  Q
    ||||||||||||||  |||| |||| |||||| |||| | || |||| | || ||||||||||||||||| |||||||||||| || ||| ||||||||     
T  30756812 tggacatcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttataggcattttgtcgttttatgctgttaacttag 30756713  T
Q  112 atgttgtaagtt 123  Q
     |||||||||||    
T  30756712 gtgttgtaagtt 30756701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 433638 - 433480
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||||||||||| || ||||||||| |||||||| | ||| ||| |||| ||  ||| || |||||||||||  ||||||| ||||| || ||| | | |    
T  433638 catgaatattccggtgactttaattttatcatatatttttgtaggcattatgctgttatatgctattaacttggatgttgtgagtttgttcgcagattca 433539  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  433538 tcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 433480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 2843183 - 2843030
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| ||||||||||||  ||||||| | ||| ||| |||| ||||||| || ||||||| |||| ||| ||| ||||| ||  || | | ||| |     
T  2843183 atattccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattagcttagatgctgtgagtttgttcacatattcatcctt 2843084  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| ||||||| ||||||| |||||    
T  2843083 tacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatat 2843030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 196
Target Start/End: Original strand, 20083474 - 20083626
Alignment:
Q  45 tattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatct 143  Q
    |||||| ||||||||| || |||||||| | ||| ||| |||| ||||||| ||||||||||||||  ||||| | ||||| || ||| | | ||||| |    
T  20083474 tattccggtcactttagttttatcatatatttttgtaggcattatgtcgttatacgctattaactttgatgttattagtttgttcgcagattcatcattt 20083573  T
Q  144 acgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || ||| |||||||||| ||||| ||| | |||| |||| |||||||||||||    
T  20083574 acatttgtagcgatgttaaatgatgtactatatcgatttgaatgaataaatat 20083626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 9977150 - 9977097
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgt 118  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||  |||||||    
T  9977150 tatcatattatttttagacattttgtcgttgtatgctattaacttggatgttgt 9977097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 26492500 - 26492653
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| ||| ||| || |||||||||||  ||| ||| ||||| ||  || | | ||| |     
T  26492500 atattccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctattaacttggatgctgtgagtttgttcacagattcatcttt 26492599  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  26492600 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 26492653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 196
Target Start/End: Original strand, 35261416 - 35261585
Alignment:
Q  28 agatacggatgcatgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttat 126  Q
    |||| |||| |||||  |||||| |||||||||||| |||||||| | ||| ||| |||| || ||||||| |||||||||||  || |||| ||||| |    
T  35261416 agatccggaggcatgtgtattccggtcactttaattttatcatatatttttgtaggcattatgccgttgtatgctattaacttggatattgtgagtttgt 35261515  T
Q  127 ttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    | ||| | | ||| | || |||||||| | |||| ||||| ||| ||||||||||| ||||||| |||||    
T  35261516 tcgcagattcatcctttatgtttttagtggtgttaaatgatgtactctatcaatttgaatgaatgaatat 35261585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 13796869 - 13796810
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 124  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||  ||||||| |||||    
T  13796869 tatcatattatttgtaggcattttgtcgttgtatgctattaacttggatgttgtgagttt 13796810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 160
Target Start/End: Complemental strand, 28407858 - 28407763
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||  ||| ||| ||||| || ||| | ||| | | || |||||||||||||||    
T  28407858 tatcatattatttgtagacattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagatttaccctttatgtttttagcgatgtt 28407763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 196
Target Start/End: Complemental strand, 34899547 - 34899413
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt-gaa 163  Q
    ||||||||||||| ||  ||||||| ||||||| |||||||||||  ||||||| ||||| || ||| | | | | | |||||||||||||||||| | |    
T  34899547 tatcatattatttgtatgcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtttgta 34899448  T
Q  164 t--gacgtaatctatcaatttaaatgaataaatat 196  Q
    |  || ||| ||||||||||| |||||||||||||    
T  34899447 tttgatgtactctatcaatttgaatgaataaatat 34899413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 47590462 - 47590557
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||   |||||| ||||| |||||| | ||| | | |||||||| |||||||||    
T  47590462 tatcatattatttgtaggcattttgccgttgtaagctattaacttgggtgttgtgagtttgtttgcagatttaccctttacgttttcagcgatgtt 47590557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 197
Target Start/End: Original strand, 6002218 - 6002316
Alignment:
Q  99 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatatt 197  Q
    |||||||||||  ||| ||| ||||||||  || | ||||||| |||||||||| ||||||||||| | |||| ||||| |||| ||||||| ||||||    
T  6002218 gctattaacttggatgatgtgagtttattcacagatttatcatttacgtttttaacgatgttgaataatgtaacctatcgatttgaatgaatgaatatt 6002316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 23085651 - 23085809
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| || ||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||| ||  ||  ||| ||||| || ||| | | |    
T  23085651 catggatattccggtgactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaatttggatactgtgagtttgttcgcagattca 23085750  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  23085751 tcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatcaatat 23085809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 23786705 - 23786863
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||||||||||| |||||||| | ||| ||  |||| ||| ||| || ||||| |||||| ||| ||| ||||| || ||| | | |    
T  23786705 catggatattcctgtcactttaattttatcatatatttttgtatgcattatgttgttatatgctatcaacttagatgctgtgagtttgttcgcagattca 23786804  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    |||| ||||||||||||  |||||||||| ||||||| || | || ||||||| |||||    
T  23786805 tcatttacgtttttagctgtgttgaatgatgtaatctctctaattgaatgaatgaatat 23786863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 32684798 - 32684956
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| ||||||||| || |||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||||||||| || | | | | |    
T  32684798 catggatattccggtcactttagttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtaagtttgttcgtagattca 32684897  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||| ||| || |||| ||||||| |||||    
T  32684898 tcctttacgtttttagcggtgttgaatgatgtagtctctcgatttgaatgaatgaatat 32684956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 45198980 - 45198822
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||||||| ||| |||||||| | ||| |||  ||| ||||||| ||  ||||||||||  ||||||| ||| | || ||| | | |    
T  45198980 catggatattccggtcactttgattttatcatatatttttgtaggtattatgtcgttatatactattaacttggatgttgtgagtatgttcgcagattca 45198881  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  45198880 tcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 45198822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 20116717 - 20116869
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| |||||||||||| ||||| || | ||| ||| |||| ||||||  || |||||||||||  ||||||| ||||| ||  || | | |||||     
T  20116717 atattccggtcactttaattttatcaaatatttttgtaggcattatgtcgta-tatgctattaacttggatgttgtgagtttgttcacagattcatcatt 20116815  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| ||| |||||| ||||||| || |||| ||||||| |||||    
T  20116816 tacgtttttagcggtgtggaatgatgtaatctctcgatttgaatgaatgaatat 20116869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 46822146 - 46822303
Alignment:
Q  40 atgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattat 138  Q
    |||||||||||  |||||||||||  ||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || ||| | | ||    
T  46822146 atgaatattccgatcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcat 46822245  T
Q  139 catctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    | | ||||||||||| | |||||||||| ||||||| || |||| ||||||| |||||    
T  46822246 cctttacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaattaatat 46822303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 8001486 - 8001442
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||||    
T  8001486 tatcatattatttataggcattttgccgttgtatgctattaactt 8001442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 19404734 - 19404602
Alignment:
Q  28 agatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatt 127  Q
    |||| |||| |||||| |||| |||| ||||  ||| ||||||||||||| ||| | ||||| ||||| |||||||||||||  ||| ||| ||||| ||    
T  19404734 agatccggaagcatgagtatttcagtgacttagattttatcatattatttgtaggctttttgccgttgcacgctattaacttggatgctgtgagtttgtt 19404635  T
Q  128 tgcaaaattatcatctacgtttttagcgatgtt 160  Q
     ||| | | ||| | ||| ||||||||||||||    
T  19404634 cgcagattcatcctttacatttttagcgatgtt 19404602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 28044696 - 28044652
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||    
T  28044696 tatcatattatttttagacattttgccgttgtatgctattaactt 28044652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 198
Target Start/End: Complemental strand, 35665075 - 35664940
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga-- 162  Q
    ||||||||||||| | | ||||||||||||||| |||||||||||   |  ||| ||||| ||  || | || || | ||||||||||||||||||||      
T  35665075 tatcatattattttttggcattttgtcgttgtatgctattaacttgggtactgtgagtttgttcacagatttctcctttacgtttttagcgatgttgatt 35664976  T
Q  163 atgacgtaatctatcaatttaaatgaataaatattg 198  Q
     | | ||| ||| |||||||||||||||||||||||    
T  35664975 ctaatgtattctctcaatttaaatgaataaatattg 35664940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 194
Target Start/End: Original strand, 36143910 - 36144030
Alignment:
Q  74 atttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatc 173  Q
    |||| |||||||| ||||||| ||  ||||||||||  ||| ||| |||| ||| ||| | | || || || |||||||||| |||||||||| ||| ||    
T  36143910 atttgtagacattatgtcgttatatactattaacttggatggtgtgagttaattagcagattcattatttatgtttttagcggtgttgaatgatgtactc 36144009  T
Q  174 tatcaatttaaatgaataaat 194  Q
    |||||||||  ||||||||||    
T  36144010 tatcaatttggatgaataaat 36144030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 46244205 - 46244149
Alignment:
Q  52 gtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaact 108  Q
    |||||||||||| ||||||||||||| ||| ||||||||| ||||| | ||||||||    
T  46244205 gtcactttaattttatcatattatttgtaggcattttgtcattgtatgttattaact 46244149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 48316752 - 48316708
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  48316752 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 48316708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 4999996 - 4999937
Alignment:
Q  38 gcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgta 97  Q
    ||||||||||||  || | || |||| |||||||||||||||||||||||| ||||||||    
T  4999996 gcatgaatattctggtgatttaaattttatcatattatttatagacattttttcgttgta 4999937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 23425221 - 23425162
Alignment:
Q  137 atcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||| |||||||||||||||||||||| | ||||||| | ||||| ||||||| |||||    
T  23425221 atcatttacgtttttagcgatgttgaataatgtaatctcttaatttgaatgaatgaatat 23425162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 25255382 - 25255437
Alignment:
Q  69 atattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 124  Q
    |||| |||| ||| ||||||||||||||| |||||||||||| ||||||| |||||    
T  25255382 atatcatttgtaggcattttgtcgttgtatgctattaacttagatgttgtgagttt 25255437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 196
Target Start/End: Original strand, 40993308 - 40993442
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt-gaa 163  Q
    ||||||||||||| ||| ||||||||||||||| | |||||||||   |||||| ||||| || ||| | | | | | |||||||||||||||||| | |    
T  40993308 tatcatattatttgtaggcattttgtcgttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtttgta 40993407  T
Q  164 t--gacgtaatctatcaatttaaatgaataaatat 196  Q
    |  || ||| |||||| |||||||||||| |||||    
T  40993408 tctgatgtactctatcgatttaaatgaatgaatat 40993442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 17611629 - 17611679
Alignment:
Q  146 gtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||| ||||||||||| ||| ||||||||||| ||||||| |||||    
T  17611629 gtttttagcaatgttgaatgatgtactctatcaatttgaatgaatgaatat 17611679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 21609511 - 21609457
Alignment:
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatatt 197  Q
    |||| ||||| |||||||||||||  || |||||| |||||||||||||||||||    
T  21609511 tacgcttttatcgatgttgaatgatatactctatctatttaaatgaataaatatt 21609457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 42067009 - 42066851
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||||||||||| |||||||||||| |||||||| | ||| ||| |||   | || | |  |||||||||||  ||||||| ||| | || ||| | |||    
T  42067009 catgaatattccggtcactttaattttatcatatatttttgtaggcataacgccgatatgtgctattaacttggatgttgtgagtatgttcgcatattta 42066910  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    |  | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  42066909 ttctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 42066851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 1485098 - 1485045
Alignment:
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  1485098 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 1485045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 162
Target Start/End: Original strand, 11343964 - 11344057
Alignment:
Q  69 atattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 162  Q
    ||||||||| |||  ||||||  |||||| ||||||||||||  |||  ||||||| | |||| | | ||||| ||||||||||||||||||||    
T  11343964 atattatttgtaggtattttgatgttgtatgctattaacttaggtgtcttaagtttgtatgcagattcatcatttacgtttttagcgatgttga 11344057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 13592477 - 13592305
Alignment:
Q  18 tcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgtt 116  Q
    ||||||||  |||| ||||||||||  |||||  |||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||| |    
T  13592477 tcaacgttgcagatccggatgcatgggtattctggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttcgatgct 13592378  T
Q  117 gtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaat 190  Q
    || ||||| || ||| | | ||| | ||| ||||||||  |||||||| | ||| |||||| |||| |||||||    
T  13592377 gtgagtttgttcgcagattcatcctttacatttttagcagtgttgaat-atgtactctatcgattttaatgaat 13592305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 72
Target Start/End: Complemental strand, 14627826 - 14627793
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat 72  Q
    ||||||||||||||||||||||||| ||||||||    
T  14627826 catgaatattccagtcactttaattttatcatat 14627793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 24069334 - 24069290
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| |||||| |||||||| |||||||||||    
T  24069334 tatcatattatttgtaggcattttatcgttgtatgctattaactt 24069290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 39171530 - 39171486
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  39171530 tatcatattatttgtaggcattttgccgttgtatgctattaactt 39171486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 46700149 - 46700229
Alignment:
Q  28 agatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaact 108  Q
    |||| |||| ||||| ||||| | || ||||  ||| ||||||||||||||||| ||||||| |||| || ||||||||||    
T  46700149 agatccggaagcatggatatttcggtgacttagattttatcatattatttataggcattttgccgttatatgctattaact 46700229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 48061573 - 48061617
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  48061573 tatcatattatttgtaggcattttgccgttgtatgctattaactt 48061617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 49148075 - 49148011
Alignment:
Q  45 tattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||| ||||  ||| |||||||||| || | | ||||||||||||||| |||||||||||    
T  49148075 tattccagtgacttggattttatcatattaattgttggcattttgtcgttgtatgctattaactt 49148011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 191
Target Start/End: Original strand, 36184653 - 36184826
Alignment:
Q  18 tcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttg 117  Q
    |||||||| |||||  ||| |||| ||||||   |||||||| ||| ||||||| ||||| ||| ||||||||||||||| |||||||||||  ||||||    
T  36184653 tcaacgttgtagatcaggaggcataaatattatggtcactttgattttatcatactatttctaggcattttgtcgttgtatgctattaacttggatgttg 36184752  T
Q  118 taagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaata 191  Q
    | ||||| |||| |||| |||  | |||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  36184753 tgagtttgtttgtaaaactattctttacgtttttagcaatgttgaatgatgtactctatcaatttaaatgaata 36184826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 9528824 - 9528666
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || ||||||||||| |||||||| ||||| || ||| | | |    
T  9528824 catggatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttgaatgttgtgagtttgttcgcagattca 9528725  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  9528724 tcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 9528666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 25274025 - 25274183
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||||||||||| |||||||| | ||| ||| |||| ||  ||| || |||||||||||| ||||||| ||||| || ||| | | |    
T  25274025 catggatattccggtcactttaattttatcatatatttttgtaggcattatgctgttatatgctattaacttagatgttgtgagtttgttcgcagattca 25274124  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  25274125 tcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 25274183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 38706657 - 38706499
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||| | |||||||||||| |||||||| | ||| |||||||| ||||||| || |||||||||||  ||| ||| ||||| || ||| | | |    
T  38706657 catggatatttcggtcactttaattttatcatatatttttgtagacattatgtcgttatatgctattaacttggatgatgtgagtttgttcgcagattca 38706558  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  38706557 tcttttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 38706499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 45 - 197
Target Start/End: Original strand, 4821064 - 4821217
Alignment:
Q  45 tattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaa-cttaaatgttgtaagtttatttgcaaaattatcatct 143  Q
    |||| |||||||||||||| ||||||||||||| |||||||||| |||||||| |  |||||   || || |||| | ||||||  || | | ||||| |    
T  4821064 tatttcagtcactttaattttatcatattatttgtagacattttatcgttgtatgtaattaataatagatattgtgattttattcacatattcatcattt 4821163  T
Q  144 acgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatatt 197  Q
    | ||||||||||||  ||| ||| |||||||||| |||||||||||||||||||    
T  4821164 atgtttttagcgatactgattgatgtaatctatccatttaaatgaataaatatt 4821217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 50766454 - 50766301
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| ||||||||||||  ||||||| | ||| ||| |||| ||  ||| || ||||||||||| |||| ||| ||||| || | | | | ||||||    
T  50766454 atattccggtcactttaatttcatcatatatttttgtaggcattatgctgttatatgctattaacttgaatgctgtgagtttgttcgtagattcatcatc 50766355  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| || |||||||||||| |||||    
T  50766354 tacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaatat 50766301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 45 - 196
Target Start/End: Original strand, 12265610 - 12265761
Alignment:
Q  45 tattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatct 143  Q
    ||||||| ||||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||||||| ||||| ||  || | | ||||| |    
T  12265610 tattccaatcactttaattttatcatatatttttttaggcattatgccgttatatgctattaactttgatgttgtgagtttgttcacagattcatcat-t 12265708  T
Q  144 acgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  12265709 acgtttttagcgatgttgaatgatgtaacctatcgatttgaatgaatgaatat 12265761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 190
Target Start/End: Original strand, 44947554 - 44947706
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||||||||||| |||||||| | ||| ||| |||| || |||| || | |||||||||  ||||||| ||||| || ||| | | |    
T  44947554 catggatattccggtcactttaattttatcatatatttttgtaggcattgtgccgttatatgttattaacttggatgttgtgagtttgttcgcagattca 44947653  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaat 190  Q
    || | ||||||||||||| |||||||||| ||||||| || ||||||||||||    
T  44947654 tcctttacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaat 44947706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 49072707 - 49072632
Alignment:
Q  43 aatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgt 118  Q
    ||||||||| ||||||| ||| |||| |||||||| |||||||||| | |||||| ||||||||||||||||||||    
T  49072707 aatattccaatcactttcattttatcgtattatttgtagacattttattgttgtatgctattaacttaaatgttgt 49072632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 4644000 - 4644158
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatattat-ttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||||||||||| |||| ||||||| ||||||||  | || ||| |||| || |||| || |||||||||||  ||||||| || || || ||| | | |    
T  4644000 catgaatattccggtcaatttaattttatcatatattattgtaggcattatgccgttatatgctattaacttggatgttgtgagcttgttcgcagattca 4644099  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | |||||||||||||||||||||||| ||||||| || |||| ||||||| |||||    
T  4644100 tcctttacgtttttagcgatgttgaatgatgtaatctctcgatttgaatgaatgaatat 4644158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 51318127 - 51318285
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||| ||| ||||| ||  || | | |    
T  51318127 catggatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcacagattca 51318226  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||  |||||||||| ||||||| || |||||||||||| |||||    
T  51318227 tcctttacgtttttagcagtgttgaatgatgtaatctctcgatttaaatgaatgaatat 51318285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 53 - 196
Target Start/End: Complemental strand, 46991064 - 46990920
Alignment:
Q  53 tcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgttttt 151  Q
    ||||||||||| |||||||| | ||| ||| |||| ||||||| || ||| ||||||| |||||||| ||||| || ||| | | ||||| |||||||||    
T  46991064 tcactttaattttatcatatatttttgtaggcattatgtcgttctatgctgttaacttgaatgttgtgagtttgttcgcagattcatcatttacgttttt 46990965  T
Q  152 agcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || |  ||||||||| ||| |||||| |||| ||||||| |||||    
T  46990964 agtggcgttgaatgatgtactctatcgatttgaatgaatgaatat 46990920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 1532065 - 1532208
Alignment:
Q  54 cactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgttttta 152  Q
    |||||||||| |||||||| | ||| |||||||| || |||| || |||||||||||  ||||||| || || || ||| | | ||| | || |||||||    
T  1532065 cactttaattttatcatatatttttgtagacattatgccgttatatgctattaacttggatgttgtgagcttgttcgcagattcatcctttatgttttta 1532164  T
Q  153 gcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||| |||||||||||||||||| || |||| ||||||| |||||    
T  1532165 gcggtgttgaatgacgtaatctctcgatttgaatgaatgaatat 1532208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 10359496 - 10359338
Alignment:
Q  38 gcatgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatt 136  Q
    ||||| ||||||||||||||||| || |||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || ||||| |     
T  10359496 gcatggatattccagtcactttatttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcaaattc 10359397  T
Q  137 atcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||| | ||||||||||||| |||||||||| ||||||| || ||||  |||||| |||||    
T  10359396 atctt-tacgtttttagcggtgttgaatgatgtaatctctcgatttggatgaatgaatat 10359338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 182
Target Start/End: Original strand, 21090273 - 21090428
Alignment:
Q  28 agatacggatgcatgaatattccagtcactttaattgtatcatattattta-tagacattttgtcgttgtacgctattaacttaaatgttgtaagtttat 126  Q
    |||| |||| ||||||||||||| |||||||||||| |||||| |  |||  ||| |||| ||||||| || | |||||||||  ||  ||| ||||| |    
T  21090273 agatccggaagcatgaatattccggtcactttaattttatcatctacttttgtaggcattatgtcgttatatgttattaacttggatagtgtgagtttgt 21090372  T
Q  127 ttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaattt 182  Q
    ||||| | | ||| | ||||||||||||| |||||||||| ||||||| |||||||    
T  21090373 ttgcagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcaattt 21090428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 157
Target Start/End: Original strand, 27652113 - 27652204
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgat 157  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||| | |||||| ||||| || ||| | | ||| | |||||||||||||||    
T  27652113 atcatattatttgtagacattttgccgttgtatgctattaacttgagtgttgtgagtttgttcgcagattcatcctatacgtttttagcgat 27652204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 191
Target Start/End: Complemental strand, 37188542 - 37188389
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatattattta-tagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||||||||||| |||||||| ||||  ||| |||| |||| || || |||||||||||  ||| ||| ||| | || ||| | |||    
T  37188542 catggatattcctgtcactttaattttatcatataattttgtaggcattgtgtcattatatgctattaacttggatgctgtgagtgtgttcgcagattta 37188443  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaata 191  Q
    || | | ||||||||||| |||||||||| ||||||| || |||| ||||||||    
T  37188442 tcttttgcgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaata 37188389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 162
Target Start/End: Complemental strand, 42032469 - 42032372
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 162  Q
    ||||||||||||  ||| ||||||| ||||||| ||||||||||| |||||||| ||||| |||||||| ||  | | || ||||||| |||||||||    
T  42032469 tatcatattattggtagccattttgccgttgtatgctattaacttgaatgttgtgagtttgtttgcaaatttcacctttatgtttttaacgatgttga 42032372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 43444535 - 43444692
Alignment:
Q  40 atgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattat 138  Q
    ||||||||||| ||||||||||||  ||||||| | ||| ||| |||| || |||| || |||||||| || |||| ||| ||||| || ||| | | ||    
T  43444535 atgaatattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaatttgaatgctgtgagtttgttcgcagattcat 43444634  T
Q  139 catctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    | | |||||| ||| || |||||||||| ||||||| ||||||| ||||||| |||||    
T  43444635 cctttacgttcttaacggtgttgaatgatgtaatctctcaatttgaatgaatgaatat 43444692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 35964950 - 35964770
Alignment:
Q  12 tggacatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaactta 110  Q
    ||||| ||||||||  |||| |||| |||||| |||| |||||||||||||| |||||||| | ||| |||  ||| ||| ||| || |||||||||||     
T  35964950 tggacgtcaacgttgcagatccggaggcatgagtatttcagtcactttaattttatcatatatttttgtaggaattatgttgttatatgctattaacttg 35964851  T
Q  111 aatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaata 191  Q
     ||||||| || || || ||||| | ||  | ||||||||||||| |||||||||  ||  |||||| |||| ||||||||    
T  35964850 gatgttgtgagattgttcgcaaactcattctttacgtttttagcggtgttgaatggtgtcctctatcgatttgaatgaata 35964770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 26123416 - 26123479
Alignment:
Q  52 gtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgt 115  Q
    |||||||||||| ||||||||||||| |||| || |||| |||||| ||||||||||| |||||    
T  26123416 gtcactttaattttatcatattatttgtagatatattgttgttgtatgctattaacttgaatgt 26123479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 198
Target Start/End: Complemental strand, 3336093 - 3335951
Alignment:
Q  57 tttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcg 155  Q
    ||||||| |||||||| ||||| ||| ||||  | |||| || |||| |||||| |||||| | ||||| |||||| | | ||| | |||||||||||||    
T  3336093 tttaattttatcatatatatttgtaggcattacgccgttatatgctaataacttgaatgttttgagtttgtttgcagattcatcctttacgtttttagcg 3335994  T
Q  156 atgttgaatgacgtaatctatcaatttaaatgaataaatattg 198  Q
     |||||||||| ||| |||||  |||| ||||||| |||||||    
T  3335993 gtgttgaatgatgtactctattgatttgaatgaatgaatattg 3335951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 197
Target Start/End: Complemental strand, 9645466 - 9645312
Alignment:
Q  44 atattccagtcactttaattgtatcatattattta-tagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| |||||||||||| ||||||||  |||  |||  ||| || |||| || |||||||||||  ||| ||| ||||| || ||| | | ||| |     
T  9645466 atattccggtcactttaattttatcatatacttttgtaggtattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctt 9645367  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatatt 197  Q
    ||||||||| ||| |||||||||| ||||||| || |||| ||||||||||||||    
T  9645366 tacgttttttgcggtgttgaatgatgtaatctctcgatttgaatgaataaatatt 9645312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 34024385 - 34024227
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||| ||||||| |||||||| | ||| ||  |||| ||| ||| || |||||||||||  ||||||| ||||| || ||| | | |    
T  34024385 catggatattccggtcattttaattttatcatatatttttgtaagcattatgttgttatatgctattaacttggatgttgtgagtttgttcgcagattca 34024286  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||  ||||||| || |||| ||||||| |||||    
T  34024285 tcctttacgtttttagcggtgttgaatggtgtaatctctcgatttgaatgaatgaatat 34024227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 43153983 - 43153806
Alignment:
Q  18 tcaacgttatagatacggatgc-atgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgt 115  Q
    ||||||||| |||| |||| || ||| ||||||| |||||||||||| |||||||| | ||| ||| |||| || |||| || ||| |||||||  ||||    
T  43153983 tcaacgttacagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctgttaacttggatgt 43153884  T
Q  116 tgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||| ||||| || |   | | ||| | ||||||||||||||| |||||||| | ||||| || |||| |||||||||||||    
T  43153883 tgtgagtttgttcg---attcatcctttacgtttttagcgatattgaatgatgcaatctctcgatttgaatgaataaatat 43153806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 43318255 - 43318153
Alignment:
Q  16 catcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgt 115  Q
    |||||| |||||||||  ||  |||| |||||| | |||||||||||| ||||| |||||||||||  ||||||||  | || ||||||||||| |||||    
T  43318255 catcaatgttatagatctgggggcataaatatttcggtcactttaattttatcacattatttataggtattttgtcactttatgctattaactttaatgt 43318156  T
Q  116 tgt 118  Q
    |||    
T  43318155 tgt 43318153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 45227988 - 45227830
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||||||||||| |||||||||||| |||||||| | ||| | | |||| ||  ||| || | |||||||||  ||||||| ||||| || | | | | |    
T  45227988 catgaatattccggtcactttaattttatcatatatttttgtgggcattatgcggttatatgttattaacttggatgttgtgagtttgttcgtagattca 45227889  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  45227888 tcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 45227830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 9284054 - 9284211
Alignment:
Q  40 atgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattat 138  Q
    ||||||||| ||||||||||||||  ||||||| | ||| ||| |||| || |||| || ||||||| | |  ||||||| ||||| || | | | | ||    
T  9284054 atgaatatttcagtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattatcatggatgttgtgagtttgttcgtagattcat 9284153  T
Q  139 catctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    | | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  9284154 cttttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 9284211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 19853505 - 19853408
Alignment:
Q  12 tggacatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||| ||||||||  |||| |||| ||||| ||||| | || |||| | || ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  19853505 tggacgtcaacgttgcagatccggaagcatggatatttcggtgacttaagttttatcatattatttctaggcattttgccgttgtatgctattaactt 19853408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 29966522 - 29966627
Alignment:
Q  92 gttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaata 191  Q
    |||||| |||||||||||  ||||||| ||||| || ||| | | ||| | |||||||||| ||||||||||||| ||||| | |  ||||||||||||     
T  29966522 gttgtatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttaacgatgttgaatgatgtaatttcttgatttaaatgaatg 29966621  T
Q  192 aatatt 197  Q
    ||||||    
T  29966622 aatatt 29966627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 53616592 - 53616439
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| ||||||||||||  || |||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || ||| | | ||| |     
T  53616592 atattccggtcactttaatttcattatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcctt 53616493  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  53616492 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 53616439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 53811144 - 53811241
Alignment:
Q  12 tggacatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||| ||||||||  |||| |||| |||||| |||| | || |||| | || ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  53811144 tggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcattttggcgttgtatgctattaactt 53811241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 6155163 - 6155119
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  6155163 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 6155119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 9178522 - 9178566
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  9178522 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 9178566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 191
Target Start/End: Original strand, 47417809 - 47417957
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    |||||||| |||||||||||  ||||||| | ||| ||| |||| || |||| || | ||||||||| |||| ||| ||||| ||  || | | ||| |     
T  47417809 atattccattcactttaatttcatcatatatttttgtaggcattatgccgttatatgttattaacttgaatgctgtgagtttgttcacagattcatcctt 47417908  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaata 191  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||||    
T  47417909 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaata 47417957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 56040586 - 56040542
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  56040586 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 56040542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 7008934 - 7008871
Alignment:
Q  60 aattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtt 123  Q
    |||| ||||||||||||| | ||||||||| ||||||| ||||||||||||  |||||| ||||    
T  7008934 aattttatcatattatttgtggacattttgccgttgtatgctattaacttaggtgttgtgagtt 7008871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 28834218 - 28834159
Alignment:
Q  18 tcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattattt 77  Q
    |||||||| ||||| ||||  ||||| |||||| |||||||||||| |||||||||||||    
T  28834218 tcaacgttgtagatccggagacatgactattccggtcactttaattttatcatattattt 28834159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 108
Target Start/End: Complemental strand, 29120319 - 29120276
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaact 108  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||    
T  29120319 tatcatattatttgtaggcattttgtcgttgtatgctattaact 29120276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 196
Target Start/End: Complemental strand, 52097868 - 52097705
Alignment:
Q  34 ggatgcatgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaa 132  Q
    ||||||||| ||||||| |||||||||||| |||||||| | ||| ||| |||| || |||| || | |||||||||  ||||||| |||||||| |||     
T  52097868 ggatgcatggatattccggtcactttaattttatcatatatctttgtaggcattatgacgttatatggtattaacttggatgttgtgagtttattcgcat 52097769  T
Q  133 aattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    | | | | | ||||||||||||| | | |||||| ||| ||| |  |||| ||||||| |||||    
T  52097768 attcaccctttacgtttttagcggtatcgaatgatgtactctgttgatttgaatgaatgaatat 52097705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 22305561 - 22305511
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgt 115  Q
    ||||||||||||| |||  |||||||||||||| ||||||||||| |||||    
T  22305561 tatcatattatttgtaggtattttgtcgttgtatgctattaacttgaatgt 22305511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 31381558 - 31381512
Alignment:
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaa 189  Q
    |||||||||||||||||||||||| ||||||| || |||| ||||||    
T  31381558 tacgtttttagcgatgttgaatgatgtaatctctcgatttgaatgaa 31381512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 124
Target Start/End: Original strand, 36194878 - 36194936
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 124  Q
    |||||||||||| ||| ||||||| ||||||| |||||||||||  ||||||| |||||    
T  36194878 atcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagttt 36194936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 37684026 - 37684088
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatt 127  Q
    ||||||||||||| | ||||||||||||||||  ||||||||| ||  |||||| ||||||||    
T  37684026 tatcatattatttgttgacattttgtcgttgtgtgctattaacctaggtgttgtgagtttatt 37684088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 107
Target Start/End: Original strand, 45418681 - 45418723
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaac 107  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||    
T  45418681 tatcatattatttgtaggcattttgtcgttgtatgctattaac 45418723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 49680777 - 49680831
Alignment:
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatatt 197  Q
    ||||||||||||| |||||||||| |||| || || |||||||||||| ||||||    
T  49680777 tacgtttttagcggtgttgaatgatgtaacctctcgatttaaatgaatgaatatt 49680831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 20569504 - 20569557
Alignment:
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  20569504 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 20569557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 182
Target Start/End: Complemental strand, 21365075 - 21364950
Alignment:
Q  57 tttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcga 156  Q
    ||||||| |||||||||| || |  |||||||||||||||| | || ||||||  | || || ||||| || ||||| | ||| | | | |||||| |||    
T  21365075 tttaattttatcatattagttgtcaacattttgtcgttgtatgatactaacttggaagtcgtgagtttgttcgcaaactcatcctttccatttttaacga 21364976  T
Q  157 tgttgaatgacgtaatctatcaattt 182  Q
    | |||||||| |||||||||||||||    
T  21364975 tcttgaatgatgtaatctatcaattt 21364950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 162
Target Start/End: Complemental strand, 31891223 - 31891130
Alignment:
Q  69 atattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 162  Q
    ||||||||| ||| ||||||| ||||||| |||||||||||   |||||| ||||| || ||||| | | | | ||||||||||||||| ||||    
T  31891223 atattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcaccctatacgtttttagcgatattga 31891130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 195
Target Start/End: Original strand, 56199238 - 56199395
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    ||||||||||||  | ||||||||| |||||||| | ||| |||||||| || ||||  | |||||||||||  ||| ||| ||||| || ||| | | |    
T  56199238 catgaatattccgatgactttaattttatcatatatttttgtagacattatgccgttacatgctattaacttggatgctgtgagtttgttcgcagattca 56199337  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaata 195  Q
    || | ||||||||||||  |||||||||| || |||| || |||| ||||||| ||||    
T  56199338 tcctttacgtttttagcagtgttgaatgatgtgatctctcgatttgaatgaatgaata 56199395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 32766683 - 32766727
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| |||| |||||||||| |||||||||||    
T  32766683 tatcatattatttgtaggcattatgtcgttgtatgctattaactt 32766727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 37465651 - 37465695
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||  ||||||||||||||| |||||||||||    
T  37465651 tatcatattatttgtaagcattttgtcgttgtatgctattaactt 37465695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 40068752 - 40068840
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatt 127  Q
    ||||||||||||  ||||||||||| | | ||||||||||| | ||||||   || |||  |||||||||| |||||||| ||||||||    
T  40068752 catgaatattccgatcactttaattttgttatattatttattggcattttactgtcgtatactattaacttgaatgttgtgagtttatt 40068840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 47320352 - 47320308
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  47320352 tatcatattatttgtaggcattttgccgttgtatgctattaactt 47320308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 189
Target Start/End: Original strand, 33298970 - 33299142
Alignment:
Q  18 tcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgtt 116  Q
    ||||||||  |||||||||||||||| ||||| ||||||||||||| |||||||| | ||||||| |||| || |||| || |||||||||||| |||||    
T  33298970 tcaacgttgcagatacggatgcatgagtattctagtcactttaattttatcatatatttttataggcattatgccgttatatgctattaacttagatgtt 33299069  T
Q  117 gtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaa 189  Q
    || ||||| || ||| | | ||||| |||  |||||| | |||||||||| ||| ||||||||||||||||||    
T  33299070 gtgagtttgttcgcagattcatcatttacaattttaggggtgttgaatgatgtattctatcaatttaaatgaa 33299142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 27747084 - 27746928
Alignment:
Q  16 catcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatg 114  Q
    |||||||||| ||||| ||||||||||  |||||| |||||||| ||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  |||    
T  27747084 catcaacgttgtagatccggatgcatgggtattccggtcacttttatt-tatcatatatttttgtaggcattatgtcgttatatgctattaacttggatg 27746986  T
Q  115 ttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaat 172  Q
    |||||| |||||||||| | | ||||| ||||||||||||| | |||||||| |||||    
T  27746985 ttgtaaatttatttgcagattcatcatttacgtttttagcggtattgaatgatgtaat 27746928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 36 - 187
Target Start/End: Original strand, 8441319 - 8441470
Alignment:
Q  36 atgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaat 135  Q
    |||||||||||||||  | ||||||||| |||||||||||||  ||  ||||| |||||||| |||||||| ||| ||| | | |||||||||||||| |    
T  8441319 atgcatgaatattccgataactttaattttatcatattatttgcaggtattttatcgttgtatgctattaatttagatgatatgagtttatttgcaaatt 8441418  T
Q  136 tatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatg 187  Q
     ||| | |||||| ||||| ||||| ||||| ||| | ||||||||| ||||    
T  8441419 catcttttacgttcttagcaatgttaaatgatgtattttatcaatttgaatg 8441470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 44099868 - 44099725
Alignment:
Q  54 cactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgttttta 152  Q
    |||||||||| |||||||| | ||| ||  |||| ||||||| || |||||||||||  ||||||| ||||| || ||| | | ||| | ||||||||||    
T  44099868 cactttaattttatcatatatttttgtatgcattatgtcgttatatgctattaacttggatgttgtgagtttgttagcagattcatcctttacgttttta 44099769  T
Q  153 gcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||| |||||||||| ||||||| ||||||| |||||||||||||    
T  44099768 gcggtgttgaatgatgtaatctctcaatttgaatgaataaatat 44099725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 4809106 - 4809259
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| ||||||||||||  ||||||| | ||| ||| |||| || |||| || |||||||||||| ||||||| ||||| || ||| | | ||| |     
T  4809106 atattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttagatgttgtgagtttgttcgcagattcatcctt 4809205  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  4809206 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 4809259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 44 - 190
Target Start/End: Original strand, 2656012 - 2656159
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| ||||||||||||  ||||||| | ||| ||| |||| ||  ||| || |||||||||||  ||| ||| ||||| || ||||| | |||||     
T  2656012 atattccggtcactttaatttcatcatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttgttcgcaaattcatcatt 2656111  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaat 190  Q
    ||||||||||||| |||||||||| ||||||| || ||||||||||||    
T  2656112 tacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaat 2656159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 160
Target Start/End: Complemental strand, 28086750 - 28086655
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||| |  | | ||||| ||  || | | ||||||||||||||||||||||||    
T  28086750 tatcatattatttgtaggcattttgtcgttgtatgctattaacttaagtactatgagtttgttcacatattcatcatctacgtttttagcgatgtt 28086655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 29617212 - 29617153
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 124  Q
    ||||||||||||| ||| |||||||| |||||| |||||||||||||||||||| |||||    
T  29617212 tatcatattatttgtaggcattttgttgttgtatgctattaacttaaatgttgtgagttt 29617153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 34609987 - 34610046
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 124  Q
    |||||||||||| |||| ||||||| ||||| | ||||||||||||||||||||||||||    
T  34609987 tatcatattattaataggcattttggcgttgaatgctattaacttaaatgttgtaagttt 34610046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 32724428 - 32724270
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||||||||||  |||| ||| | ||| ||| |||| ||||||| ||  ||||||||||  ||||||| ||||| || | | | |||    
T  32724428 catggatattccggtcactttaatcttatcttatatttttgtaggcattatgtcgttatatactattaacttggatgttgtgagtttgttcgtagattta 32724329  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||||| || ||| |||||||| |||||    
T  32724328 tcctttacgtttttagcggtgttgaatgatgtaatctctcgattcaaatgaatgaatat 32724270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 14906865 - 14906712
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| ||| ||| || |||||||||||  ||  ||| ||||| || ||| | | ||| |     
T  14906865 atattccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctattaacttggatcctgtgagtttgttcgcagattcatcctt 14906766  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  14906765 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 14906712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 19876440 - 19876493
Alignment:
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| ||||||| |||||||||||||    
T  19876440 tacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaataaatat 19876493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 28240083 - 28240136
Alignment:
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||||||| |||||    
T  28240083 tacgtttttagcgatgttgaatgacgtaacctatcgatttgaatgaatgaatat 28240136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 43890066 - 43889913
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| ||||||||||||  ||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| | ||| |||||| | | ||| |     
T  43890066 atattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgattttgtttgcagattcatcctt 43889967  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||  |||||||| | ||||||| ||||||||||||||| |||||    
T  43889966 tacgtttttagcattgttgaataatgtaatctctcaatttaaatgaatgaatat 43889913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 190
Target Start/End: Complemental strand, 23851425 - 23851289
Alignment:
Q  55 actttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttag 153  Q
    |||||||||  ||||||| | ||| ||| |||| ||||||| || |||||||||||| ||||||| ||||| || ||| | ||||| | ||| |||||||    
T  23851425 actttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaacttagatgttgtgagtttgttcgcagatttatcttttacttttttag 23851326  T
Q  154 cgatgttgaatgacgtaatctatcaatttaaatgaat 190  Q
     | |||||||||| ||||||| || |||| |||||||    
T  23851325 tggtgttgaatgatgtaatctctcgatttgaatgaat 23851289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 25238531 - 25238475
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaag 121  Q
    ||||||||||||||||||||||||| ||||||| | ||| ||||| |||||||||||    
T  25238531 tatcatattatttatagacattttgccgttgtatgttataaacttgaatgttgtaag 25238475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 196
Target Start/End: Original strand, 33342570 - 33342728
Alignment:
Q  38 gcatgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatt 136  Q
    |||||| |||||  |||||||||||| |||||||| ||||| ||| |||| || |||| || ||||||||||| |||| ||| ||||| || ||| | |     
T  33342570 gcatgagtattcaggtcactttaattttatcatatatatttgtaggcattatgccgttatatgctattaacttgaatgctgtgagtttgttcgcagattc 33342669  T
Q  137 atcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||| |||  |||||||| |||||||| | |||||||||  |||| ||||||| |||||    
T  33342670 atcatttac-attttagcggtgttgaataatgtaatctattgatttgaatgaatgaatat 33342728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 11464313 - 11464459
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| ||||||||||||  ||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || | | | | ||| |     
T  11464313 atattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgtagattcatcctt 11464412  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaa 189  Q
    ||||||||||||| |||||||||| ||||||| || |||||||||||    
T  11464413 tacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaa 11464459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 11725817 - 11725975
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||| ||| ||||||||| || |||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| ||  || | | |    
T  11725817 catggatactccggtcactttagttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcacagattca 11725916  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||||| ||||||| ||||||| |||||    
T  11725917 tcctttacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatat 11725975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 29777356 - 29777514
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| || ||||||||  |||||||| | |||  || |||| ||||||| || |||||||||||  ||| ||| ||||| || ||| | | |    
T  29777356 catggatattccggtgactttaatattatcatatatttttggaggcattatgtcgttatatgctattaacttggatgctgtgagtttgttcgcagattca 29777455  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  29777456 tcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 29777514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 196
Target Start/End: Original strand, 15344459 - 15344594
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcga--tgttga 162  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||   || ||| ||||| || ||| | | ||| | ||||||||||||||  | ||||    
T  15344459 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgtttttagcgatcttttga 15344558  T
Q  163 --atgacgtaatctatcaatttaaatgaataaatat 196  Q
       ||| ||| ||||||||||| |||||||||||||    
T  15344559 ttctgatgtattctatcaatttgaatgaataaatat 15344594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 196
Target Start/End: Original strand, 15433524 - 15433659
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcga--tgttga 162  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||   || ||| ||||| || ||| | | ||| | ||||||||||||||  | ||||    
T  15433524 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgtttttagcgatcttttga 15433623  T
Q  163 --atgacgtaatctatcaatttaaatgaataaatat 196  Q
       ||| ||| ||||||||||| |||||||||||||    
T  15433624 ttctgatgtattctatcaatttgaatgaataaatat 15433659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 196
Target Start/End: Original strand, 15524828 - 15524963
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcga--tgttga 162  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||   || ||| ||||| || ||| | | ||| | ||||||||||||||  | ||||    
T  15524828 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgtttttagcgatcttttga 15524927  T
Q  163 --atgacgtaatctatcaatttaaatgaataaatat 196  Q
       ||| ||| ||||||||||| |||||||||||||    
T  15524928 ttctgatgtattctatcaatttgaatgaataaatat 15524963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 17427067 - 17427014
Alignment:
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||||||||||||   |||||||||||||| |||||||| |||||    
T  17427067 tacgtttttagcgatgttgaatattgtaatctatcaattcaaatgaatgaatat 17427014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 17430717 - 17430664
Alignment:
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||||||||||||||  ||||||||||||| |||| ||| |||||    
T  17430717 tacgtttttagcgatgttgaatgatataatctatcaattcaaatcaatgaatat 17430664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 31013599 - 31013502
Alignment:
Q  12 tggacatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||| ||||||||  |||| |||| |||||  |||| |||| |||| | || ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  31013599 tggacgtcaacgttgcagattcggaagcatgtgtatttcagtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaactt 31013502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 196
Target Start/End: Original strand, 33896284 - 33896381
Alignment:
Q  99 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    |||||||||||  ||||||| ||||| || ||| | | ||| | ||| ||||||||| |||||||||| ||||||| || |||| |||||||||||||    
T  33896284 gctattaacttggatgttgtgagttttttcgcagattcatcctttacatttttagcggtgttgaatgatgtaatctctcgatttgaatgaataaatat 33896381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 34611946 - 34612099
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| | | ||| || |||||||||||  ||||||| ||||| || ||| | | ||  |     
T  34611946 atattccggtcactttaattttatcatatatttttgtaggcattatcttgttatatgctattaacttggatgttgtgagtttgttcgcagattcattctt 34612045  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||| |||||| ||||| ||||||| || |||| ||||||| |||||    
T  34612046 tacgtttttagtgatgttcaatgatgtaatctctcgattttaatgaatgaatat 34612099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 9637347 - 9637303
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  9637347 tatcatattatttttaggcattttgtcgttgtatgctattaactt 9637303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 18890637 - 18890593
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  18890637 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 18890593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 23230794 - 23230838
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  23230794 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 23230838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 27110403 - 27110359
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| |||||||||| |||||||| |||||||||||    
T  27110403 tatcatattatttgtagacattttatcgttgtatgctattaactt 27110359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 24186619 - 24186504
Alignment:
Q  45 tattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatcta 144  Q
    |||| |||| |||| |||| ||||||||||||||||| ||||||| ||| |||  |||||||||||  |||| | ||||| || ||| | | ||| | ||    
T  24186619 tatttcagtgacttaaattttatcatattatttataggcattttgccgtcgtatactattaacttaggtgttatgagtttgttagcagattcatctttta 24186520  T
Q  145 cgtttttagcgatgtt 160  Q
    |||||||| |||||||    
T  24186519 cgtttttatcgatgtt 24186504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 35812797 - 35812852
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatattatttatagacattttgtcgtt 94  Q
    ||||| |||| |||| ||||||||| ||||||||||||| |||| |||||||||||    
T  35812797 catgagtatttcagtgactttaattttatcatattatttgtagatattttgtcgtt 35812852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 41896669 - 41896712
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||    
T  41896669 atcatattatttgtaggcattttgtcgttgtatgctattaactt 41896712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 20553241 - 20553135
Alignment:
Q  3 gcaatgagatggacatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgcta 102  Q
    |||||||  ||||| ||||||||  |||| |||| |||||| |||| | || ||||   || ||||||||||||| ||| ||||||| ||||||| ||||    
T  20553241 gcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaggttttatcatattatttgtaggcattttgccgttgtatgcta 20553142  T
Q  103 ttaactt 109  Q
    |||||||    
T  20553141 ttaactt 20553135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 198
Target Start/End: Original strand, 21238017 - 21238074
Alignment:
Q  143 tacgtttttagcgatgttga--atgacgtaatctatcaatttaaatgaataaatattg 198  Q
    ||||||||||||||||||||  |||| ||| ||||||||||| ||||||| |||||||    
T  21238017 tacgtttttagcgatgttgattatgatgtattctatcaatttgaatgaatgaatattg 21238074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 42447974 - 42447888
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 124  Q
    |||||||||||||| |||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||||||| |||||    
T  42447974 catgaatattccagacactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagttt 42447888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 44578167 - 44578253
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 124  Q
    |||| ||||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||| |||||||||    
T  44578167 catggatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtaagttt 44578253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 3673545 - 3673658
Alignment:
Q  18 tcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttg 117  Q
    ||||||||  |||| |||| |||||| |||| |||| |||| | ||  |||||||||||| ||| ||||||| |||||||  ||||||||||  ||| ||    
T  3673545 tcaacgttgcagatccggaagcatgagtatttcagtgacttaagtttaatcatattatttgtaggcattttgccgttgtatcctattaacttggatgctg 3673644  T
Q  118 taagtttatttgca 131  Q
    | ||||| ||||||    
T  3673645 tgagtttgtttgca 3673658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 9072960 - 9073013
Alignment:
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  9072960 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 9073013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 196
Target Start/End: Complemental strand, 9619243 - 9619146
Alignment:
Q  99 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    |||||||||||  ||| ||| ||||| || ||| | | ||| | ||||||||||||| |||||||||| ||||| | ||||||| ||||||| |||||    
T  9619243 gctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttagcggtgttgaatgatgtaatatctcaatttgaatgaatgaatat 9619146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 10377787 - 10377884
Alignment:
Q  12 tggacatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||||  |||| |||| |||||  |||| | |  |||| | || ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  10377787 tggacatcaacgttgcagatccggaagcatgggtatttcggcgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaactt 10377884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 11197081 - 11197158
Alignment:
Q  99 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctat 176  Q
    |||||||||||  ||| ||| ||||| ||| || | ||||||| |||||||||| | ||||||||||| |||||||||    
T  11197081 gctattaacttggatgctgtgagtttgtttacagatttatcatttacgtttttaacaatgttgaatgatgtaatctat 11197158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 29939451 - 29939504
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgt 118  Q
    ||||||||||||| ||| ||||||| ||||||| | |||||||||| |||||||    
T  29939451 tatcatattatttgtagtcattttgccgttgtatgatattaacttagatgttgt 29939504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 37565821 - 37565668
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| |||||||| ||| |||||||| | ||| ||| |||| ||  ||| || |||||||||||  ||| ||| ||||| || ||||| | ||| |     
T  37565821 atattccggtcactttgattttatcatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttgttcgcaaattcatcctt 37565722  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||| | |||||||||| ||||||| || ||||  |||||| |||||    
T  37565721 tacgtttttagtggtgttgaatgatgtaatctctcgatttgcatgaatgaatat 37565668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 43192315 - 43192158
Alignment:
Q  18 tcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgtt 116  Q
    ||||||||  |||| ||||  ||||||||||||  ||||||||||| |||||||| | ||| ||  |||| || |||| || |||||||||||  |||||    
T  43192315 tcaacgttgcagatccggagacatgaatattccgatcactttaattttatcatatatttttgtatccattatgccgttatatgctattaacttggatgtt 43192216  T
Q  117 gtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatct 174  Q
     | ||||| || ||| | | ||| | || |||||||||| |||||||||| |||||||    
T  43192215 ctgagtttgttcgcagattcatcctttatgtttttagcggtgttgaatgatgtaatct 43192158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 162
Target Start/End: Complemental strand, 43833934 - 43833837
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 162  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||   || ||| ||||| |||||| | | | ||| ||| ||||||||||| ||||    
T  43833934 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccatttacttttttagcgatattga 43833837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 190
Target Start/End: Complemental strand, 7198133 - 7198006
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga-- 162  Q
    |||||||||||||  ||  |||||||||||||| |||||||| ||   |||||| |||||||| ||| | | | | | ||||||||||||||| ||||      
T  7198133 tatcatattatttgcaggaattttgtcgttgtatgctattaatttgggtgttgtgagtttattcgcagattcaccctttacgtttttagcgatcttgatt 7198034  T
Q  163 atgacgtaatctatcaatttaaatgaat 190  Q
     ||| ||| ||||||||||| |||||||    
T  7198033 ctgatgtattctatcaatttgaatgaat 7198006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 17427133 - 17427093
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaa 106  Q
    |||||||||||||||| | ||||||||||||| ||||||||    
T  17427133 atcatattatttataggcgttttgtcgttgtatgctattaa 17427093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 17430783 - 17430743
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaa 106  Q
    |||||||||||||||| | ||||||||||||| ||||||||    
T  17430783 atcatattatttataggcgttttgtcgttgtatgctattaa 17430743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 33214609 - 33214565
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||||||||||| |||| || |||||||||||    
T  33214609 tatcatattatttttagacattttgccgttttatgctattaactt 33214565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 196
Target Start/End: Complemental strand, 35141756 - 35141672
Alignment:
Q  112 atgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||| |||||| ||| ||| ||||||| |||||||| ||  ||||||||| |  || ||||||||| | |||||||||||||    
T  35141756 atgttgtgagtttagttgtaaatttatcatttacgttttcagtaatgttgaataatatactctatcaatatgaatgaataaatat 35141672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 8e-25; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 27949560 - 27949718
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| |||||||||||||||||||| |||||||| | |||||||||||| || ||||||| |||||||||||  ||||||| ||||| || | | | | |    
T  27949560 catggatattccagtcactttaattttatcatatatttttatagacattatgacgttgtatgctattaacttggatgttgtgagtttgttcggagattca 27949659  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    |||| ||||||||||||| ||||||||||  |||| | || |||||||||||| |||||    
T  27949660 tcatttacgtttttagcggtgttgaatgatataatatctcgatttaaatgaatgaatat 27949718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 8806000 - 8806158
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||||||||||| |||||||| | ||| ||| ||||||| |||| || |||||||||||  ||||||| || || || ||| | | |    
T  8806000 catggatattccggtcactttaattttatcatatatttttgtaggcattttgccgttatatgctattaacttggatgttgtgagattgttcgcagattca 8806099  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | |||||||||||||||||||||||| ||||||| || |||| ||||||| |||||    
T  8806100 tcctttacgtttttagcgatgttgaatgatgtaatctctcgatttgaatgaatgaatat 8806158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 30923422 - 30923264
Alignment:
Q  38 gcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||||| |||| |||||| ||||  | ||||||||||||||||| ||||||   |||||| | ||||||||| |||||||||||||| || ||| | | |    
T  30923422 gcatgagtatttcagtcattttatatttatcatattatttatagtcatttttatgttgtatgatattaacttgaatgttgtaagtttgttcgcagattca 30923323  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    | || |||| ||||||| ||||| ||||| ||| ||||||||||| ||||||| |||||    
T  30923322 ttatttacgattttagcaatgttaaatgatgtactctatcaatttgaatgaatgaatat 30923264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 21570355 - 21570197
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    ||||||||||||  ||||||||||| |||||||| | ||| ||| |||| || ||||||| ||||||||||| |||| ||||||||| || ||| | | |    
T  21570355 catgaatattccgttcactttaattttatcatatatttttgtaggcattatgccgttgtatgctattaacttgaatgctgtaagtttgttcgcagattca 21570256  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
     | | || |||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  21570255 gcctttatgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 21570197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 15690537 - 15690694
Alignment:
Q  40 atgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatc 139  Q
    |||||||||  ||||||||||||  ||||||||||||| || | ||||||  |||||| | | |||| || |||||||| ||||| || | | | |||||    
T  15690537 atgaatatttaagtcactttaatcttatcatattatttgtaaatattttggtgttgtatgttgttaatttgaatgttgtgagtttgttggtagatttatc 15690636  T
Q  140 a-tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    | | || ||||||||||||||||||||| ||||  ||||||||||||||||| |||||    
T  15690637 aatttatgtttttagcgatgttgaatgatgtaacatatcaatttaaatgaatgaatat 15690694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 45 - 196
Target Start/End: Complemental strand, 9986283 - 9986131
Alignment:
Q  45 tattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatct 143  Q
    |||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||||||| ||||| || ||| | | ||| | |    
T  9986283 tattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttt 9986184  T
Q  144 acgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    |||||||||||| |||||||||| ||||||| || ||||  |||||| |||||    
T  9986183 acgtttttagcggtgttgaatgatgtaatctctcgatttggatgaatgaatat 9986131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 41712758 - 41712578
Alignment:
Q  18 tcaacgttatagatacggatgc-atgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgt 115  Q
    ||||||||  ||||||||| || ||||||||||| |||| ||||||| |||||||| | ||| |||  ||| ||  ||| || | |||||||||| || |    
T  41712758 tcaacgttgcagatacggaggccatgaatattccggtcattttaattttatcatatatttttgtaggtattatgcagttatatgttattaacttatatat 41712659  T
Q  116 tgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||| ||||| || ||| | ||||||| ||| ||||||| |||||||||||| ||||| | ||||||||||||||| |||||    
T  41712658 tgtgagtttgttcgcagatttatcatttacatttttagtgatgttgaatgatgtaatttttcaatttaaatgaatgaatat 41712578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 196
Target Start/End: Complemental strand, 20047057 - 20046871
Alignment:
Q  12 tggacatcaacgttatagatacggatgc-atgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||||  |||| |||| || ||||||||||| || ||||||||| |||||||| | ||| ||| |||| ||||||| ||   |||||||||    
T  20047057 tggacatcaacgttgcagatccggaggccatgaatattccggtgactttaattttatcatatatttttgtaggcattatgtcgttatatcttattaactt 20046958  T
Q  110 aaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
      ||| ||| | ||| || ||| | | ||| | ||||||||||||| |||||||||| ||||||| || |||||||||||| |||||    
T  20046957 ggatgctgtgattttgttcgcagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaatat 20046871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 4904086 - 4904027
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 124  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||  ||||||| |||||    
T  4904086 tatcatattatttgtagacattttgtcgttgtatgctattaacttggatgttgtgagttt 4904027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 141
Target Start/End: Original strand, 7604336 - 7604411
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcat 141  Q
    ||||||||||| ||||||||||| || ||||| |||||||||||  ||||||||| ||| |||||||| |||||||    
T  7604336 atcatattattcatagacattttatcattgtatgctattaacttggatgttgtaaatttgtttgcaaacttatcat 7604411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 52 - 190
Target Start/End: Original strand, 10548333 - 10548470
Alignment:
Q  52 gtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgttttt 151  Q
    |||||||||||| | ||| ||||||||||| |||||||| |||||| | |||||||||  ||||||| ||||| ||| |||| | | ||| || | ||||    
T  10548333 gtcactttaattttctcaaattatttataggcattttgttgttgtatgttattaacttggatgttgtgagtttgtttacaaattgaccatttatg-tttt 10548431  T
Q  152 agcgatgttgaatgacgtaatctatcaatttaaatgaat 190  Q
    ||| |||||||||||  ||  |||||||| |||||||||    
T  10548432 agcaatgttgaatgatataccctatcaatataaatgaat 10548470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 55 - 196
Target Start/End: Original strand, 41431178 - 41431320
Alignment:
Q  55 actttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttag 153  Q
    ||||||||| |||||||| | ||| ||| |||| || |||| ||  ||||||||||  ||||||| |||||||| ||| | ||||| | |||||||||||    
T  41431178 actttaattttatcatatatttttgtaggcattatgccgttatatactattaacttggatgttgtgagtttattcgcagatttatcctttacgtttttag 41431277  T
Q  154 cgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || |||||||| | ||||||| || |||| ||||||| |||||    
T  41431278 cggtgttgaataatgtaatctctcgatttgaatgaatgaatat 41431320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 65 - 163
Target Start/End: Original strand, 41694780 - 41694877
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaa 163  Q
    ||||||||||||||||| |||||||||||| || | |||||||||   |||| ||||||| ||  |||| | ||||| |||||||||||||||||||||    
T  41694780 tatcatattatttataggcattttgtcgttatatgttattaactttggtgtt-taagtttgttcacaaattcatcatttacgtttttagcgatgttgaa 41694877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 162
Target Start/End: Complemental strand, 17249088 - 17248991
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 162  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||   || ||| ||||| || ||| | | ||||| ||||||||||||||| ||||    
T  17249088 tatcatattatttgtagacattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcatttacgtttttagcgatcttga 17248991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 196
Target Start/End: Complemental strand, 40625943 - 40625846
Alignment:
Q  99 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||| |||||| | ||||| || ||| | | ||||| |||||||||||||||||||||||| ||||||| || |||| |||| || |||||    
T  40625943 gctattaacttgaatgttatgagtttgttcgcagattcatcatttacgtttttagcgatgttgaatgatgtaatctctcgatttgaatggatgaatat 40625846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 4228256 - 4228415
Alignment:
Q  39 catgaatattccagtcactttaattgt-atcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatt 136  Q
    |||| |||||||  ||||||||||| | ||||||| | ||| ||| |||| ||||||| || |||||||||||  ||||||| ||||| || ||| | |     
T  4228256 catggatattccgatcactttaatttttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattc 4228355  T
Q  137 atcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||| | ||| ||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  4228356 atcctttacatttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 4228415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 190
Target Start/End: Complemental strand, 8971570 - 8971423
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| |||||||||||| |||||||| | ||| |||||||| || |||| || |||||||||||  ||| ||| ||||| || ||| | | ||| |     
T  8971570 atattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgctattaacttggatgctgtgagtttgttcgcatattcatcctt 8971471  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaat 190  Q
    ||| || |||||| |||||||||| ||||||| || |||| |||||||    
T  8971470 tacattcttagcggtgttgaatgatgtaatctctcgatttgaatgaat 8971423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 10929771 - 10929890
Alignment:
Q  12 tggacatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaa 111  Q
    ||||||||||||||  |||| |||| |||||  |||||  || | || |||| ||||||||||||||||| |||||||| |||| | |||||||||||      
T  10929771 tggacatcaacgttgcagatccggaagcatgtgtattctggtgatttaaattttatcatattatttataggcattttgttgttgaatgctattaacttgg 10929870  T
Q  112 atgttgtaagtttatttgca 131  Q
    ||| ||| ||||| ||||||    
T  10929871 atgctgtgagtttgtttgca 10929890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 160
Target Start/End: Complemental strand, 11985174 - 11985079
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
    ||||||||||||| ||| |||||||  ||||||  ||||||||||  ||||||| | ||| || ||||| | ||||| ||||||||||||||||||    
T  11985174 tatcatattatttgtaggcattttgctgttgtatcctattaacttggatgttgtgaatttgttcgcaaattcatcatttacgtttttagcgatgtt 11985079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 1421835 - 1421901
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgca 131  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||   |||||| ||||| ||||||    
T  1421835 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgtttgca 1421901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 195
Target Start/End: Complemental strand, 84156 - 83971
Alignment:
Q  12 tggacatcaacgttatagatacggatg-catgaatattccagtcactttaattgtatcatattattta-tagacattttgtcgttgtacgctattaactt 109  Q
    ||||| ||||||||  |||| |||||| |||| ||||||| | |||||||||| ||||||||  |||  ||| |||| || |||| || |||||||||||    
T  84156 tggacgtcaacgttgcagatccggatgtcatggatattccggccactttaattttatcatatattttcgtaggcattatgccgttatatgctattaactt 84057  T
Q  110 aaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaata 195  Q
      ||| ||| ||||| || ||| | | ||| | ||||||||||||| |||||||||| ||||| | || |||| ||||||| ||||    
T  84056 ggatgctgtgagtttgttcgcagattcatcctttacgtttttagcggtgttgaatgatgtaatatctcgatttgaatgaatgaata 83971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 7646584 - 7646681
Alignment:
Q  12 tggacatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||| ||||||||  |||| |||| |||||| |||| | || |||| | || ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  7646584 tggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaactt 7646681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 22538285 - 22538204
Alignment:
Q  28 agatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||| ||| ||||||||||| | || |||| |||| ||||||||||||| || | |||||||||||| | |||||||||||    
T  22538285 agatatggaagcatgaatatttctgtgacttaaattttatcatattatttgtaaatattttgtcgttgcatgctattaactt 22538204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 27249093 - 27248940
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| ||||||||||||  ||||||| | ||| ||  |||| || |||| || |||||||||||  ||||||| ||||| || ||| | | ||| |     
T  27249093 atattccggtcactttaatttcatcatatatttttgtacgcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctt 27248994  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| ||||||||||  |||||| || |||| ||||||| |||||    
T  27248993 tacgtttttagcggtgttgaatgatataatctctcgatttgaatgaatgaatat 27248940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 195
Target Start/End: Complemental strand, 39284475 - 39284354
Alignment:
Q  74 atttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatc 173  Q
    |||| |||||||||| |||||||| | | ||||||| ||| || | ||||| || ||||| | || || ||  |||||| |||| |||||||| |||||     
T  39284475 atttgtagacattttatcgttgtatgttgttaacttgaatattatgagtttgttcgcaaattcattatttatatttttaacgatattgaatgatgtaata 39284376  T
Q  174 tatcaatttaaatgaataaata 195  Q
    ||||||||| ||||||||||||    
T  39284375 tatcaatttgaatgaataaata 39284354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 10237156 - 10237060
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 162  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||   |||||| ||||| || ||| | | | | | ||||||||||||||| ||||    
T  10237156 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacgtttttagcgatattga 10237060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 13141591 - 13141667
Alignment:
Q  12 tggacatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacatttt 88  Q
    ||||| |||||||| ||||| | || ||||||||||||||| |||||| | | ||||||||||||| |||| |||||    
T  13141591 tggacgtcaacgttgtagattctgaagcatgaatattccagccacttttagtttatcatattatttgtagatatttt 13141667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 34124582 - 34124622
Alignment:
Q  36 atgcatgaatattccagtcactttaattgtatcatattatt 76  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  34124582 atgcatgaatattccaatcactttaattttatcatattatt 34124622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 160
Target Start/End: Complemental strand, 7677814 - 7677719
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||   || ||| ||||| |||||||  | | | | ||||||||||||||||||    
T  7677814 tatcatattatttttaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcaagttcaccttttacgtttttagcgatgtt 7677719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 13719018 - 13718959
Alignment:
Q  137 atcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||| |||||||||||||||||||||||| | | ||||||| ||| ||||||| |||||    
T  13719018 atcatttacgtttttagcgatgttgaatgatgcactctatcattttgaatgaatgaatat 13718959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 209
Target Start/End: Original strand, 24461603 - 24461745
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatg 165  Q
    |||||||| ||| |||  ||||||||||| || |||||||||||   |||||| ||||| || |||   | ||| | ||||||||||||||||||| ||     
T  24461603 atcatattttttgtaggtattttgtcgttatatgctattaactttggtgttgtgagtttgttcgcaggttcatcctttacgtttttagcgatgttg-att 24461701  T
Q  166 acgtaatctatcaatttaaatgaataaatattgatttaattttg 209  Q
    | ||| ||||||||||| ||||||| ||||| | |||| |||||    
T  24461702 atgtattctatcaatttgaatgaatgaatatcgttttatttttg 24461745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 28533895 - 28533836
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 124  Q
    ||||||||||||| |||  |||||||||||||| ||||||||||| | |||||| |||||    
T  28533895 tatcatattatttgtaggtattttgtcgttgtatgctattaacttgagtgttgtgagttt 28533836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 32448557 - 32448498
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 124  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||  ||||||| |||||    
T  32448557 tatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagttt 32448498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 33229087 - 33229016
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaactt 109  Q
    |||| |||||||||||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||    
T  33229087 catggatattccagtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaactt 33229016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 7015658 - 7015500
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| ||| |||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || ||| | | |    
T  7015658 catggatattcccgtcgctttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattca 7015559  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    |    ||||||||||||  |||||||||| ||||||| || |||| |||||||||||||    
T  7015558 ttcgttacgtttttagctgtgttgaatgatgtaatctctcgatttgaatgaataaatat 7015500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 162
Target Start/End: Original strand, 19597998 - 19598095
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 162  Q
    ||||||||||||| ||||||||||  ||||||| ||||||||||| | |||||| | ||| || ||| | |  |||| ||||||||| || |||||||    
T  19597998 tatcatattatttgtagacattttaccgttgtatgctattaacttgagtgttgtgaatttgttcgcatattnttcatttacgttttttgcaatgttga 19598095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 131
Target Start/End: Original strand, 32190851 - 32190889
Alignment:
Q  93 ttgtacgctattaacttaaatgttgtaagtttatttgca 131  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  32190851 ttgtatgctattaacttaaatgttgtgagtttatttgca 32190889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 163
Target Start/End: Complemental strand, 33760134 - 33760036
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaa 163  Q
    ||||||||||||| ||| |||||||  |||||| |||||||||||   || ||| ||||| ||| || | | ||| | |||||||||||||||||||||    
T  33760134 tatcatattatttgtaggcattttgctgttgtaagctattaacttgtgtgctgttagtttgtttacagactcatcctttacgtttttagcgatgttgaa 33760036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 8308338 - 8308387
Alignment:
Q  147 tttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||||||| || |||||||||| |||| ||||||| |||||    
T  8308338 tttttagcgatgttgaacgatgtaatctatcgatttgaatgaatgaatat 8308387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 8809452 - 8809497
Alignment:
Q  79 tagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 124  Q
    ||||||||||||||||||| |||||||||||  ||||||| |||||    
T  8809452 tagacattttgtcgttgtatgctattaacttggatgttgtgagttt 8809497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 182
Target Start/End: Original strand, 23903494 - 23903619
Alignment:
Q  57 tttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcga 156  Q
    ||||||| |||||||||| || |  |||||||||||||||| | || ||||||  | || || ||||| || ||||| | ||| | | | |||||| |||    
T  23903494 tttaattttatcatattagttgtcaacattttgtcgttgtatgatactaacttggaagtcgtgagtttgttcgcaaactcatcctttccatttttaacga 23903593  T
Q  157 tgttgaatgacgtaatctatcaattt 182  Q
    | |||||||| |||||||||||||||    
T  23903594 tcttgaatgatgtaatctatcaattt 23903619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 196
Target Start/End: Original strand, 30420864 - 30420961
Alignment:
Q  99 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    |||||||||||  ||||||| ||||| || ||| | | ||| | ||| ||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  30420864 gctattaacttggatgttgtgagtttgttcgcagattcatcctttacatttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 30420961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 31788553 - 31788710
Alignment:
Q  3 gcaatgagatggacatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgcta 102  Q
    |||||||  ||||| ||||||||  |||| || | |||||| |||| |||| ||||   || || |||||||||| ||| ||||||| ||||||| ||||    
T  31788553 gcaatgatttggacgtcaacgttgcagatccgaaagcatgagtatttcagtgacttaggttttaacatattatttgtaggcattttgccgttgtatgcta 31788652  T
Q  103 ttaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
    |||||||  ||| ||| ||||| || ||| | | | | | ||||||||||||||||||    
T  31788653 ttaacttggatgctgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 31788710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 36234237 - 36234290
Alignment:
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  36234237 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 36234290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 38575427 - 38575275
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| ||||||||||||  ||||||| | ||| ||| |||| ||||||| || ||||||| |||  ||||||| ||||| || ||| | | ||| |     
T  38575427 atattccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattatcttggatgttgtgagtttgttcgcagattcatcctt 38575328  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | |||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  38575327 tatg-ttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 38575275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 3309105 - 3309201
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 162  Q
    |||||||||||| ||| ||||||| ||||||| |||||||||||   || ||| |||||||| ||| | | | | | ||||||||||||||| ||||    
T  3309105 atcatattatttgtagtcattttgccgttgtatgctattaacttgggtgctgtgagtttattcgcagattcaccctatacgtttttagcgatattga 3309201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 9169199 - 9169155
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  9169199 tatcatattatttgtaggcattttgccgttgtatgctattaactt 9169155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 12554122 - 12554078
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||||||||||| | |||||||||    
T  12554122 tatcatattatttgtaggcattttgtcgttgtatgatattaactt 12554078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 196
Target Start/End: Original strand, 15439900 - 15439928
Alignment:
Q  168 gtaatctatcaatttaaatgaataaatat 196  Q
    |||||||||||||||||||||||||||||    
T  15439900 gtaatctatcaatttaaatgaataaatat 15439928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 18695202 - 18695238
Alignment:
Q  54 cactttaattgtatcatattatttatagacattttgt 90  Q
    |||||||||| ||||||||||||||||| ||||||||    
T  18695202 cactttaattttatcatattatttataggcattttgt 18695238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 196
Target Start/End: Original strand, 21132032 - 21132124
Alignment:
Q  104 taacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||||| ||||| || ||| | | |||   ||||||||||||| |||||||||| ||||| | || |||| ||||||| |||||    
T  21132032 taacttaaatgttgtgagtttgttcgcagattcatcccttacgtttttagcggtgttgaatgatgtaatttttcgatttgaatgaatgaatat 21132124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 29279521 - 29279417
Alignment:
Q  55 actttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagc 154  Q
    |||| |||| ||||||||||||| ||| ||||||| |||| || ||||||||||    |||||| ||||| || ||| | | | ||| ||||||||||||    
T  29279521 acttaaattttatcatattatttgtaggcattttgccgttttatgctattaactatggtgttgtgagtttgttcgcatattcaccatttacgtttttagc 29279422  T
Q  155 gatgt 159  Q
    |||||    
T  29279421 gatgt 29279417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 34335621 - 34335577
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    |||||||||||||||| | ||||||| |||||| |||||||||||    
T  34335621 tatcatattatttatatatattttgttgttgtatgctattaactt 34335577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 34720 - 34581
Alignment:
Q  47 ttccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacg 146  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||| |||||| ||  |||||||| ||||||||||||| || ||| | | ||| ||||      
T  34720 ttccagtcactttaattttatcatattatttgtaggcattttgttgttgtatgcctttaacttagatgttgtaagtttgttcgcagattcatcctctata 34621  T
Q  147 tttttagcgatgttgaatgacgtaatctatcaatttaaat 186  Q
    ||||||  ||||||||||||  || | |||||||||||||    
T  34620 tttttattgatgttgaatgatctattatatcaatttaaat 34581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 196
Target Start/End: Original strand, 5856041 - 5856192
Alignment:
Q  45 tattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatcta 144  Q
    ||||||| ||||||||||| || |||||||||| |||| |||||| ||||||| ||||||||||| ||||||| || ||| ||  |||| | ||||| ||    
T  5856041 tattccaatcactttaattttaccatattatttgtagaaattttgccgttgtatgctattaacttgaatgttgcaaatttgttcacaaattcatcattta 5856140  T
Q  145 cgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    | |||||| | || ||||| || ||| ||||||||||| ||||||| |||||    
T  5856141 cttttttaacaatattgaacgatgtactctatcaatttgaatgaatgaatat 5856192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 38520503 - 38520324
Alignment:
Q  18 tcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgtt 116  Q
    ||||||||  |||| |||| ||||| |||||||||||||||||||| |||| ||| | ||| ||| |||| |  |||| || |||||||||||  |||||    
T  38520503 tcaacgttgcagattcggaggcatggatattccagtcactttaattttatcgtatatttttgtaggcattataccgttatatgctattaacttggatgtt 38520404  T
Q  117 gtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || ||||| ||  |||| | ||| | ||||||||||| |||||||||||| ||||| | ||||||||||||||| |||||    
T  38520403 gtgagtttgttcacaaattcatcctttacgtttttagtgatgttgaatgatgtaatttctcaatttaaatgaatgaatat 38520324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 9687152 - 9686994
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||||||||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||| ||| ||||| || ||| | | |    
T  9687152 catgaatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcgcagattca 9687053  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||| | || |||| ||||||| |||||    
T  9687052 tcctttacgtttttagcggtgttgaatgatgtaatatctcgatttgaatgaatgaatat 9686994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 45426013 - 45425855
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||||||||| | |||||||||||| |||||||| | ||| ||| |||| |  |||| || |||||||||||  ||| ||| |||||||| ||| | | |    
T  45426013 catgaatatttcggtcactttaattttatcatatatttttgtaggcattataccgttatatgctattaacttggatgctgtgagtttattcgcagattca 45425914  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    |||| ||||||||||||||| || ||||| ||||||| ||||||| ||||||| |||||    
T  45425913 tcatttacgtttttagcgatattaaatgatgtaatctctcaatttgaatgaatgaatat 45425855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 40 - 197
Target Start/End: Complemental strand, 50272086 - 50271928
Alignment:
Q  40 atgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattat 138  Q
    |||||||||||||||||||||||| | |||||| | ||| ||| |||| || |||| || |||||||||||| ||||||| ||||| || ||| | | ||    
T  50272086 atgaatattccagtcactttaattttgtcatatatttttgtaggcattatgccgttatatgctattaacttagatgttgtgagtttgttcgcagattcat 50271987  T
Q  139 catctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatatt 197  Q
    |   ||| ||||||||| |||||||||| ||||| | || |||| ||||||||||||||    
T  50271986 ccgttacctttttagcggtgttgaatgatgtaatatctcgatttgaatgaataaatatt 50271928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 19715837 - 19715684
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| ||||||||||||  ||||||| | ||| ||| |||| ||  ||| || |||||||||||  ||| ||| |||||||| ||| | | ||| |     
T  19715837 atattccggtcactttaatttcatcatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttattcgcagattcatcctt 19715738  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||||| |||||    
T  19715737 tacgtttttagcggtgttgaatgatgtaatctctcaatttaaatgaatgaatat 19715684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 51871997 - 51872155
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| || ||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||| ||| ||||| || ||| | | |    
T  51871997 catggatattccggtgactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgctgtgagtttgttcgcagattca 51872096  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| ||||||| || ||||||| ||||||| ||||||| |||||    
T  51872097 tcctttacgtttttagcggtgttgaaggatgtaatctctcaatttgaatgaatgaatat 51872155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 195
Target Start/End: Complemental strand, 5324505 - 5324349
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||| | |||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||||||| ||||  || ||| | | |    
T  5324505 catggatatttcggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagttg-ttcgcagattca 5324407  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaata 195  Q
    |  | |||||||||||||||||||||||| ||||||| || |||||||||||| ||||    
T  5324406 tgctttacgtttttagcgatgttgaatgatgtaatctctcgatttaaatgaatgaata 5324349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 196
Target Start/End: Original strand, 47133056 - 47133188
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga--a 163  Q
    |||||||| ||| ||| ||||||| |||| || |||||||||||  ||||||| ||||| || ||| | ||||| | ||||||||||||||||||||       
T  47133056 atcatattttttgtaggcattttgccgttatatgctattaacttggatgttgtgagtttgttcgcagatttatcctttacgtttttagcgatgttgattc 47133155  T
Q  164 tgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||| ||| ||||||||||| ||||||| |||||    
T  47133156 tgatgtattctatcaatttgaatgaatgaatat 47133188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 156
Target Start/End: Original strand, 31919141 - 31919232
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcga 156  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||  ||||||  ||||| || ||| | | ||| | ||||||||||||||    
T  31919141 tatcatattatttgtagacattttgtcgttgtatgctattaacttggatgttgcgagtttgttcgcagattcatcctttacgtttttagcga 31919232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 50148509 - 50148655
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| ||||||||||||  ||||||| | ||| ||| |||| ||||||| || |||||||||||  ||||||| ||||  || ||| | | ||| |     
T  50148509 atattccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagttgtttcgcagattcatcctt 50148608  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaa 189  Q
    ||| |||||||||||||||||||| ||||||| || |||| ||||||    
T  50148609 tacatttttagcgatgttgaatgatgtaatctctcgatttgaatgaa 50148655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 50166030 - 50165888
Alignment:
Q  55 actttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttag 153  Q
    ||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||||||| ||||| ||  || | | ||| | |||||||||||    
T  50166030 actttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcacagattcatcctttacgtttttag 50165931  T
Q  154 cgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || |||||||||| ||||||| || |||||||||||| |||||    
T  50165930 cggtgttgaatgatgtaatctctcgatttaaatgaatgaatat 50165888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 51868592 - 51868434
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    ||||||||||||  | ||||||||| |||||||| | ||| ||| |||| || |||| || | |||||||||  ||| ||| ||||| || ||||| | |    
T  51868592 catgaatattccgatgactttaattttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgctgtgagtttgttcgcaaattca 51868493  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  51868492 tcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 51868434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 799780 - 799641
Alignment:
Q  55 actttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagc 154  Q
    |||| |||| ||||||||||||| |||| ||||| || ||||| |||||||||| | ||||||  ||||| ||  || | | ||||| ||||||||||      
T  799780 acttcaattttatcatattatttgtagatatttt-tcattgtatgctattaact-agatgttgcgagtttgttcacatattcatcatttacgtttttaat 799683  T
Q  155 gatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    |||||||||||| ||| | ||||||||||||| |||||||||    
T  799682 gatgttgaatgatgtactttatcaatttaaatcaataaatat 799641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 9172629 - 9172782
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| || ||||||||| |||||||| | ||||||| |||| || || | |  |||||||||||  ||| ||| ||||| || ||| | | ||| |     
T  9172629 atattccggtgactttaattttatcatatatttttataggcattatgccgctatttgctattaacttggatgatgtgagtttgttcgcagattcatcctt 9172728  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| ||||||| ||||||| |||||    
T  9172729 tacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatat 9172782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 9180611 - 9180764
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| || ||||||||| |||||||| | ||||||| |||| || || | |  |||||||||||  ||| ||| ||||| || ||| | | ||| |     
T  9180611 atattccggtgactttaattttatcatatatttttataggcattatgccgctatttgctattaacttggatgatgtgagtttgttcgcagattcatcctt 9180710  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| ||||||| ||||||| |||||    
T  9180711 tacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatat 9180764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 196
Target Start/End: Original strand, 11454132 - 11454229
Alignment:
Q  99 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    |||||||||||  ||||||| ||||| || ||| | | ||| | ||||||||||||| |||||||||| ||||||| || |||| |||||||||||||    
T  11454132 gctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaataaatat 11454229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 11709649 - 11709496
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| || |||  || |||||||| ||| ||||||| ||||| || ||| | | ||| |     
T  11709649 atattccggtcactttaattttatcatatatttttgtaggcattatgccgtgatatgctattaatttagatgttgtgagtttgttcgcagattcatcctt 11709550  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||| | |||||||||| ||||||| || |||| ||||||| |||||    
T  11709549 tacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 11709496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 33291360 - 33291207
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| ||| ||| || ||| |||||||  ||| ||| ||||| || ||| | | |||||     
T  33291360 atattccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctgttaacttggatgctgtgagtttgttagcagattcatcatt 33291261  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||  | |||||||||| ||||||| || |||||||||||| |||||    
T  33291260 tacgtttttattggtgttgaatgatgtaatctctcgatttaaatgaatgaatat 33291207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 187
Target Start/End: Original strand, 5701398 - 5701542
Alignment:
Q  44 atattccagtcactttaattgtatcatattatt-tatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| ||||||||||||  |||||||  || | ||| |||| || |||| || |||||||||||  ||||||| ||||| || ||| | | ||| |     
T  5701398 atattccggtcactttaatttcatcatatatttgtgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctt 5701497  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatg 187  Q
    ||||||||||||| |||||||||| ||||||| ||||||| ||||    
T  5701498 tacgtttttagcggtgttgaatgatgtaatctctcaatttgaatg 5701542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 160
Target Start/End: Complemental strand, 15431606 - 15431511
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
    ||||||||||||| |||||||||| |||||||| |||||| ||||  ||||||| ||||| || ||| | | ||| | |||||||||||| |||||    
T  15431606 tatcatattatttgtagacattttatcgttgtatgctattcacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagcaatgtt 15431511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 46399107 - 46399166
Alignment:
Q  50 cagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    |||| ||||||||| |||||||||||||||| ||||||||| |||||| | |||||||||    
T  46399107 cagttactttaattatatcatattatttataaacattttgttgttgtatgttattaactt 46399166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 7342856 - 7343014
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| || ||||||||| |||||||| | ||||||| |||| ||  ||| || |||||||||||  ||| ||| ||||| || ||| | | |    
T  7342856 catggatattccggtgactttaattttatcatatatttttataggcattatgatgttatatgctattaacttggatgctgtgagtttgttcgcagattca 7342955  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||| ||| ||||||| || |||| ||||||| |||||    
T  7342956 tcctttacgtttttagcggtgttgagtgatgtaatctctcgatttgaatgaatgaatat 7343014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 196
Target Start/End: Original strand, 19061061 - 19061194
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga-- 162  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||  ||||||| ||||| || ||| | | ||| | || |||||||||||| ||||      
T  19061061 tatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcacattcatcttttatgtttttagcgatcttgatt 19061160  T
Q  163 atgacgtaatctatcaatttaaatgaataaatat 196  Q
     ||| ||| | ||||||||| ||||||| |||||    
T  19061161 ctgatgtattatatcaatttgaatgaatgaatat 19061194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 196
Target Start/End: Original strand, 19723463 - 19723605
Alignment:
Q  55 actttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttag 153  Q
    ||||||||| |||||||| | ||| ||| |||| ||||||| || | |||||||||  ||| ||| |||||||| ||| | | ||| | |||||||||||    
T  19723463 actttaattttatcatatatttttgtaggcattatgtcgttatatgttattaacttggatgctgtgagtttattcgcagattcatcctttacgtttttag 19723562  T
Q  154 cgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
     | |||||||||| ||||||| || |||| ||||||| |||||    
T  19723563 tggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 19723605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 196
Target Start/End: Original strand, 20266444 - 20266594
Alignment:
Q  47 ttccagtcactttaattgtatcatattattta-tagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctac 145  Q
    |||||||||||||||||  |||||||  |||  |||||||| || |||| || || ||||||||  ||||||| |||||||| ||| | | ||| | |||    
T  20266444 ttccagtcactttaatttcatcatatacttttgtagacattatgccgttatatgcaattaacttggatgttgtgagtttattcgcagattcatcctttac 20266543  T
Q  146 gtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    |||||||| | |||||||| | ||||||| || |||| ||||||| |||||    
T  20266544 gtttttagtggtgttgaataatgtaatctctcgatttgaatgaatgaatat 20266594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 25406231 - 25406073
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| || ||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || ||| | | |    
T  25406231 catggatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattca 25406132  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||| | || |||| ||||||| |||||    
T  25406131 tcttttacgtttttagcggtgttgaatgatgtaatatctcgatttgaatgaatgaatat 25406073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 39888334 - 39888396
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatt 127  Q
    ||||||||| ||||||  |||||| |||||||| |||||||||||| ||||||| ||||||||    
T  39888334 tatcatattctttatatgcattttatcgttgtatgctattaacttagatgttgtgagtttatt 39888396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 48809185 - 48809127
Alignment:
Q  38 gcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgt 96  Q
    |||||| |||| |||||||||||||| |||||||||||||||||  |||||||| ||||    
T  48809185 gcatgagtatttcagtcactttaattttatcatattatttataggtattttgtcattgt 48809127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 27456650 - 27456731
Alignment:
Q  79 tagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
    ||||||||||||||||||| |||||||||||   |||||| ||||| || ||||| | ||| | |||||||||| |||||||    
T  27456650 tagacattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcatcttttacgtttttaacgatgtt 27456731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 39987657 - 39987710
Alignment:
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||| ||||||||| ||||||| |||||    
T  39987657 tacgtttttagcggtgttgaatgatgtaatttatcaatttgaatgaatgaatat 39987710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 5983988 - 5984032
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  5983988 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 5984032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 36775649 - 36775553
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 162  Q
    |||||||||||| ||| ||||||| ||||||| |||||||||||  ||||||| ||||| || ||| | | | | | ||||||||||||||| ||||    
T  36775649 atcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctatacgtttttagcgatattga 36775553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 16989523 - 16989618
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
    ||||||||||||| ||| ||||||| |||| || |||||||||||   || ||| ||||| |||||| | ||| ||| ||||||||||| ||||||    
T  16989523 tatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgtttgcagatttaccatttacgtttttagtgatgtt 16989618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 164
Target Start/End: Complemental strand, 19052264 - 19052155
Alignment:
Q  55 actttaattgtatcatattatttatagacatttt-gtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttag 153  Q
    ||||||||| ||||||||||||| ||  |||||| | |||||||  ||||||| || || ||||| |||||||| | ||| ||||||| ||  |||||||    
T  19052264 actttaattttatcatattatttgtatgcatttttgccgttgtat-ctattaatttgaaggttgtgagtttattcgtaaatttatcatttatatttttag 19052166  T
Q  154 cgatgttgaat 164  Q
    |||||||||||    
T  19052165 cgatgttgaat 19052155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 45393267 - 45393321
Alignment:
Q  43 aatattccagtcactttaattgtatcatattatttatagacattttgtcgttgta 97  Q
    ||||||| ||||| ||||||| ||||||||||||||||| |||||| || |||||    
T  45393267 aatattctagtcattttaattttatcatattatttatagtcattttatcattgta 45393321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 164
Target Start/End: Original strand, 7997924 - 7998049
Alignment:
Q  40 atgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattat 138  Q
    ||||||||||| ||||||||||||  ||||||| | ||| ||| |||| || |||| || | |||||||||  ||| ||| ||||| |||||| | | ||    
T  7997924 atgaatattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgttattaacttggatgatgtgagtttgtttgcagattcat 7998023  T
Q  139 catctacgtttttagcgatgttgaat 164  Q
    | | ||||||||||||| ||||||||    
T  7998024 cctttacgtttttagcggtgttgaat 7998049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 19885231 - 19885150
Alignment:
Q  52 gtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaa 133  Q
    |||||||| ||| |||||||||||||| ||||||||| || || ||  ||| ||||||   |||||||||||| ||||||||    
T  19885231 gtcactttgattttatcatattatttagagacattttatcattatatactactaacttgggtgttgtaagtttgtttgcaaa 19885150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 21947611 - 21947526
Alignment:
Q  12 tggacatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgta 97  Q
    ||||| ||||||||  |||| |||| ||||||||||| | || |||| | || ||||||||||||| ||| ||||||| |||||||    
T  21947611 tggacgtcaacgttgcagatccggaagcatgaatatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgta 21947526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 30879314 - 30879367
Alignment:
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  30879314 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 30879367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 32873816 - 32873763
Alignment:
Q  53 tcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaa 106  Q
    ||||||| ||| ||||||||||||| ||||||| ||||| ||||| ||||||||    
T  32873816 tcactttgattttatcatattatttgtagacatattgtcattgtatgctattaa 32873763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 162
Target Start/End: Original strand, 49627065 - 49627162
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 162  Q
    |||||| |||||| ||||||||||| ||||||| |||||||| ||   |||||| ||||| || ||| | | ||| | ||||||||||||||| ||||    
T  49627065 tatcatcttatttgtagacattttgccgttgtatgctattaatttgggtgttgtgagtttgttcgcagattcatcctttacgtttttagcgatcttga 49627162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 11462422 - 11462378
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| |||  |||||||||||||| |||||||||||    
T  11462422 tatcatattatttgtaggaattttgtcgttgtatgctattaactt 11462378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 14872791 - 14872835
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  14872791 tatcatattatttgtaggcattttgccgttgtatgctattaactt 14872835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 24583298 - 24583342
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  24583298 tatcatattatttgtaggcattttgccgttgtatgctattaactt 24583342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 31984313 - 31984357
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||  ||||||||||||||| |||||||||||    
T  31984313 tatcatattatttttaagcattttgtcgttgtatgctattaactt 31984357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 32395150 - 32395194
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||||||| ||||||| || |||| |||||||||||    
T  32395150 tatcatattatttataggcattttgccgctgtatgctattaactt 32395194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 48750338 - 48750434
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 162  Q
    |||||||||||| ||| ||||||| ||||||| |||||||||||   |||||| ||||| || ||| | | | | | ||||||||||||||| ||||    
T  48750338 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcaccctatacgtttttagcgatattga 48750434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 51373798 - 51373754
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||||||| ||| |||||||||||    
T  51373798 tatcatattatttgtaggcattttgtcgtcgtatgctattaactt 51373754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 781520 - 781678
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||||||||||| |||||||| | ||| |||||||| || |||| || |||||||||||  ||||||| ||| |||| ||| | | |    
T  781520 catggatattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgctattaacttggatgttgtgagtatattcgcagattca 781619  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || |  |||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  781620 tccttcacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 781678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 11192480 - 11192659
Alignment:
Q  18 tcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttg 117  Q
    |||||||| ||||| ||||  ||||| |||| |  ||||||||| | |||| |||||||| ||  ||||||||||||||| | |||||||||  ||||||    
T  11192480 tcaacgttgtagatccggaaacatgagtatttcgatcactttaaatttatcgtattatttgtaagcattttgtcgttgtatgttattaactttgatgttg 11192579  T
Q  118 taagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatatt 197  Q
    ||| ||| || |||   ||||||| |||||||||| |||| || |||||  |  ||||||||||| ||||||| ||||||    
T  11192580 taaatttgttggcaggtttatcatttacgtttttaacgatattaaatgatattttctatcaatttgaatgaatgaatatt 11192659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 39 - 189
Target Start/End: Complemental strand, 27266806 - 27266655
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||||||||||| |||||||| | ||| ||| |||| ||| ||| || |||||||||||  ||| ||| ||||| || ||| | | |    
T  27266806 catggatattccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctattaacttggatgctgtgagtttgttcgcagattca 27266707  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaa 189  Q
    |||| ||||||||||||| |||||||||| ||||||| || |||| ||||||    
T  27266706 tcatttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaa 27266655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 19100585 - 19100527
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgta 97  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||||||||||| |||||    
T  19100585 catgagtattccagtcactttaattttatcatattatttgtagacattttgtcattgta 19100527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 19259759 - 19259601
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || ||| | |||    
T  19259759 catggatattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattta 19259660  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    |  | ||||||||||||||||||||| || ||||||| || |||| |||| ||||||||    
T  19259659 ttctttacgtttttagcgatgttgaacgatgtaatctctcgatttgaatggataaatat 19259601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 34881850 - 34882007
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||||||| ||||| |||||| | | |    
T  34881850 catggatattcc-gtcactttaattatatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgtttgcagattca 34881948  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | || |||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  34881949 tcctttatgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 34882007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 35475285 - 35475127
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| |||||||||||||||||||| |||||||| | ||| ||| |||   |||||| || |||||||||||  ||||||| ||| | || | | | | |    
T  35475285 catggatattccagtcactttaattttatcatatatttttgtaggcataacgtcgttatatgctattaacttggatgttgtgagtatgttcgtatattca 35475186  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||||| ||||||| ||||||| |||||    
T  35475185 tcctttacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatat 35475127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 42580020 - 42580178
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||||||||||| |||||||||||| |||||||| | |||  ||| ||| || |||| || ||||||||||| |||| ||| ||||| |||  | | | |    
T  42580020 catgaatattccggtcactttaattttatcatatatttttgcagatattatgccgttatatgctattaacttgaatgctgtgagtttgtttatagattca 42580119  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  42580120 tcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 42580178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 196
Target Start/End: Original strand, 15571045 - 15571197
Alignment:
Q  45 tattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatct 143  Q
    ||||||||||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||||||| ||||| || ||| | | |||   |    
T  15571045 tattccagtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccatt 15571144  T
Q  144 acgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    | |||||||| | |||||||||| |||||||||  |||| ||||||| |||||    
T  15571145 atgtttttagtggtgttgaatgatgtaatctatggatttgaatgaatgaatat 15571197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 196
Target Start/End: Complemental strand, 20257637 - 20257485
Alignment:
Q  45 tattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatct 143  Q
    |||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || | |||||||||  ||| ||| ||||| ||  || | | ||||| |    
T  20257637 tattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgttattaacttggatgatgtgagtttgttcacagattcatcattt 20257538  T
Q  144 acgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    |||||||||||||||||||||||  ||||||||| |||| ||| ||| |||||    
T  20257537 acgtttttagcgatgttgaatgatataatctatcgatttgaattaatgaatat 20257485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 24549506 - 24549654
Alignment:
Q  47 ttccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacg 146  Q
    |||||| ||| |||||| ||||||||||| | ||| |||||| || |||||  || |||||||| ||| ||||| ||| |||| ||| | ||||| ||||    
T  24549506 ttccagccacgttaattttatcatattatatgtaggcattttatctttgtatactgttaacttagatgctgtaaatttgtttgtaaattcatcatttacg 24549605  T
Q  147 tttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaata 195  Q
    |||||||  |||||||||||  || ||||| ||||||||| ||| ||||    
T  24549606 tttttagttatgttgaatgaaatattctattaatttaaataaatgaata 24549654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 34945488 - 34945636
Alignment:
Q  12 tggacatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaa 111  Q
    ||||| ||||||||  |||| |||| |||||  |||| | || |||| | || ||||||||||||||||| ||||||||||||||| |||||||||||      
T  34945488 tggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttataggcattttgtcgttgtatgctattaacttgg 34945587  T
Q  112 atgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
     |||||| ||||| || ||| | | | | | ||||||||||||||||||    
T  34945588 gtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 34945636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 37986053 - 37985965
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttag 153  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||||| |||| ||| ||||| |||||| | | ||| | |||||||||||    
T  37986053 tatcacattatttgtagacattttgtcgttgtatgctattaacttgaatgatgtgagtttgtttgcagattcatcttttacgtttttag 37985965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 41630650 - 41630709
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 124  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||  |||||| |||||    
T  41630650 tatcatattatttgtagacattttgtcgttgtatgctattaacttaggtgttgtgagttt 41630709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 4954124 - 4954282
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||||||||||| || ||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||||||| ||||| ||  || | | |    
T  4954124 catgaatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaactttgatgttgtgagtttgttcacatattca 4954223  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||| ||||||||| ||||||| || ||||||| || |||| |||||||||||||    
T  4954224 tcctttacatttttagcggtgttgaacgatgtaatctctcgatttgaatgaataaatat 4954282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 7247091 - 7247249
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| || ||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || ||| | | |    
T  7247091 catggatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattca 7247190  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  7247191 tcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 7247249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 166
Target Start/End: Original strand, 28097307 - 28097408
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaat 164  Q
    ||||||||||||| |||  |||||   |||||| ||||||||||| ||||||||||| || ||| |||| ||||  | |||||||||| |||||||||||    
T  28097307 tatcatattatttgtagttattttactgttgtatgctattaactttaatgttgtaagcttgtttacaaatttatattttacgtttttaacgatgttgaat 28097406  T
Q  165 ga 166  Q
    ||    
T  28097407 ga 28097408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 190
Target Start/End: Complemental strand, 3271349 - 3271197
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| |||||||  ||||||||||| |||||||| | ||| ||  |||| ||||||| || |||||||||||  ||||| | ||||| || ||| | | |    
T  3271349 catggatattccgatcactttaattttatcatatatttttgtaagcattatgtcgttatatgctattaacttggatgttatgagtttgttcgcagattca 3271250  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaat 190  Q
    || | ||||||||||||| |||||||||| ||||||| || |||| |||||||    
T  3271249 tcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaat 3271197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 38597892 - 38598040
Alignment:
Q  12 tggacatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaa 111  Q
    ||||| ||||||||  |||| |||| |||||  |||| |||| ||||   || ||||||||||||| ||| ||||||| ||||||| |||||||||||      
T  38597892 tggacgtcaacgttgcagatccggaagcatgggtatttcagtgacttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgg 38597991  T
Q  112 atgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
     |||||| ||||| || ||||| | | | | ||||||||||||||||||    
T  38597992 gtgttgtgagtttgttcgcaaattcaccctttacgtttttagcgatgtt 38598040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 196
Target Start/End: Original strand, 7241932 - 7242074
Alignment:
Q  55 actttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttag 153  Q
    ||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || ||| | | ||| | |||||||||||    
T  7241932 actttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttag 7242031  T
Q  154 cgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || |||||||||| ||||||| || |||| ||||||| |||||    
T  7242032 cggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 7242074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 18677412 - 18677255
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||||||||||| |||||||| | ||| ||  |||| || |||| || |||||||||||  |||||||  |||| || ||| | | |    
T  18677412 catggatattccggtcactttaattttatcatatatttttgtaagcattatgccgttatatgctattaacttggatgttgtgtgtttgttcgcagattca 18677313  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  18677312 tcct-tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 18677255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 21060230 - 21060072
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| ||  |||| |||||  ||||||| ||| | || | | | | |    
T  21060230 catggatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatattctatcaacttggatgttgtgagtatgttcgtagattca 21060131  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  21060130 tcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 21060072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 32691109 - 32691171
Alignment:
Q  69 atattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgca 131  Q
    ||||||||||||||||||||| |||||||  ||||||| |||| |||||| ||||| ||||||    
T  32691109 atattatttatagacattttgccgttgtatactattaagttaagtgttgtgagtttgtttgca 32691171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 43148859 - 43149017
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| || ||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||||||| ||||| || ||| | | |    
T  43148859 catggatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattca 43148958  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||| ||||||||| ||||||||||  |||||| || |||| ||||||| |||||    
T  43148959 tcctttacatttttagcggtgttgaatgatataatctctcgatttgaatgaatgaatat 43149017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 166
Target Start/End: Complemental strand, 7612986 - 7612877
Alignment:
Q  58 ttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcga 156  Q
    |||||| |||||||| | ||| ||| |||| ||||||| || |||||||| || |||||||| ||||| || ||||| | ||| | |||||||||||||     
T  7612986 ttaattttatcatatatttttgtaggcattatgtcgttctatgctattaaattgaatgttgtgagtttgttcgcaaattcatcttttacgtttttagcgg 7612887  T
Q  157 tgttgaatga 166  Q
    ||||||||||    
T  7612886 tgttgaatga 7612877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 31078364 - 31078315
Alignment:
Q  60 aattgtatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||||||||    
T  31078364 aattttataatattatttatagacattttgtcattgtatgctattaactt 31078315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 31802412 - 31802367
Alignment:
Q  46 attccagtcactttaattgtatcatattatttatagacattttgtc 91  Q
    |||||| ||||||||||| |||||||||||||||||| ||||||||    
T  31802412 attccaatcactttaattttatcatattatttatagatattttgtc 31802367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 37483287 - 37483332
Alignment:
Q  146 gtttttagcgatgttgaatgacgtaatctatcaatttaaatgaata 191  Q
    ||||||||||||||||||||| |||||||||| |||| ||||||||    
T  37483287 gtttttagcgatgttgaatgatgtaatctatcgatttgaatgaata 37483332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 196
Target Start/End: Original strand, 13007324 - 13007511
Alignment:
Q  12 tggacatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaa 111  Q
    ||||| ||||||||  |||| |||| |||||  |||| | || |||| | || ||||||||||||| ||| ||||||| ||||||| |||||||||||      
T  13007324 tggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgg 13007423  T
Q  112 atgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt-gaat--gacgtaatctatcaatttaaatgaataaatat 196  Q
     || ||| ||||| |||||| | | | | | |||||||||||||||||| | ||  || ||| ||||||||||| ||||||| |||||    
T  13007424 gtgctgtgagtttgtttgcagattcaccctttacgtttttagcgatgtttgtatttgatgtactctatcaatttgaatgaatgaatat 13007511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 14082336 - 14082292
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  14082336 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 14082292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 15571587 - 15571679
Alignment:
Q  18 tcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtc-gttgtacgctattaactt 109  Q
    ||||||||  |||| |||| |||||| || | |||| |||| |||| ||||||||||||||||||||||||  | |||||| |||||||||||    
T  15571587 tcaacgttgcagatccggaagcatgagtagttcagtgacttaaattttatcatattatttatagacatttttccagttgtatgctattaactt 15571679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 109
Target Start/End: Complemental strand, 9762412 - 9762349
Alignment:
Q  46 attccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||| |||||||| ||| ||| ||||||||| |||||| |||||||||||  |||||||||||    
T  9762412 attcctgtcactttgattttattatattatttgtagacactttgtcgttgttagctattaactt 9762349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 202
Target Start/End: Original strand, 11768144 - 11768295
Alignment:
Q  52 gtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttt 150  Q
    |||||||||||| |||||||| | ||| ||| |||| || |||| || ||||||| |||  ||| ||| ||||| || ||| | | ||| | ||||||||    
T  11768144 gtcactttaattttatcatatatttttgtagccattatgccgttatatgctattatcttggatgatgtgagtttgttcgcagattcatcctatacgtttt 11768243  T
Q  151 tagcgatgttgaatgacgtaatctatcaatttaaatgaataaatattgattt 202  Q
    |||||||||||||| | ||||  |||| |||| ||||||| ||||| |||||    
T  11768244 tagcgatgttgaataatgtaacatatcgattttaatgaatgaatatcgattt 11768295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 30298976 - 30299134
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||  |||||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||||| | ||| | || ||| | | |    
T  30298976 catggatattctggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttctgagtatgttcgcagattca 30299075  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | ||||||||||||| ||||||||||  |||| | || |||||||||||| |||||    
T  30299076 tcctttacgtttttagcggtgttgaatgatttaatatctcgatttaaatgaatgaatat 30299134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 197
Target Start/End: Complemental strand, 43008201 - 43008103
Alignment:
Q  99 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatatt 197  Q
    |||||||||||  ||||| | ||||| ||  |||| ||||| | ||||||||||| | |||||||||| ||||||| || |||| ||||||| ||||||    
T  43008201 gctattaacttggatgttatgagtttgttctcaaatttatcctttacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaatgaatatt 43008103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 8514605 - 8514548
Alignment:
Q  52 gtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    |||||||| ||| ||||||||||||| || | |||||||||||||| | |||||||||    
T  8514605 gtcacttttattttatcatattatttgtaaatattttgtcgttgtatgttattaactt 8514548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 196
Target Start/End: Complemental strand, 8772067 - 8771970
Alignment:
Q  99 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    |||||||||||  ||| | | ||||| |||||||| | ||| | ||||||||||| | |||||||||| ||||||| || |||| ||||||| |||||    
T  8772067 gctattaacttggatgctatgagtttgtttgcaaattcatcctttacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 8771970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 27752162 - 27752215
Alignment:
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  27752162 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 27752215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 35920983 - 35920870
Alignment:
Q  18 tcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttg 117  Q
    ||||||||  |||| |||| ||||  |||||| ||| | ||| ||| ||||||||||||| ||| ||||||||| ||||| |||||||| ||   |||||    
T  35920983 tcaacgttgcagatccggaagcatcgatattctagtgattttgattttatcatattatttgtaggcattttgtcattgtatgctattaaatttggtgttg 35920884  T
Q  118 taagtttatttgca 131  Q
    ||| ||| ||||||    
T  35920883 taaatttgtttgca 35920870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 165
Target Start/End: Original strand, 13468744 - 13468856
Alignment:
Q  53 tcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgttttta 152  Q
    |||||||| || ||||||||||| | ||| |||||||||||  || |||||||||||  || |||| ||||| || | ||| | ||||| || |||||||    
T  13468744 tcactttagttttatcatattatgtgtaggcattttgtcgtcatatgctattaactttgattttgtgagtttgttcgtaaattcatcatttatgttttta 13468843  T
Q  153 gcgatgttgaatg 165  Q
    |  ||||||||||    
T  13468844 gatatgttgaatg 13468856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 166
Target Start/End: Complemental strand, 19983276 - 19983176
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatg 165  Q
    |||||||||||| ||| |||||| || ||||| |||| |||| || ||||||| |   |||||||| | ||||| | ||| |||||||| ||||||||||    
T  19983276 atcatattatttgtaggcattttatctttgtatgctactaacatagatgttgtgaacatatttgcagatttatcttttacatttttagcaatgttgaatg 19983177  T
Q  166 a 166  Q
    |    
T  19983176 a 19983176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 24229724 - 24229680
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  24229724 tatcatattatttgtaggcattttgccgttgtatgctattaactt 24229680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 26825578 - 26825622
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  26825578 tatcatattatttgtaggcattttgccgttgtatgctattaactt 26825622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 209
Target Start/End: Original strand, 35175553 - 35175698
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga--a 163  Q
    |||||||| ||| ||| ||||||||| ||||| ||||||||||| | |||||| ||||| || ||| | | ||| | ||||||||||||||||||||  |    
T  35175553 atcatattgtttgtaggcattttgtcattgtatgctattaacttgagtgttgtgagtttgttcgcagattcatcttttacgtttttagcgatgttgatta 35175652  T
Q  164 tgacgtaatctatcaatttaaatgaataaatattgatttaattttg 209  Q
    ||| ||| ||||||||||| ||||||| ||||| | |||| |||||    
T  35175653 tgatgtattctatcaatttgaatgaatgaatatcgttttatttttg 35175698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 53 - 209
Target Start/End: Original strand, 22803171 - 22803328
Alignment:
Q  53 tcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgttttt 151  Q
    ||||||||||| |||||| | | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| ||  |||| ||||| | |||||||||    
T  22803171 tcactttaattttatcatgtatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcacaaatttatcctttacgttttt 22803270  T
Q  152 agcgatgttgaatgacgtaatctatcaatttaaatgaataaatattgatttaattttg 209  Q
    ||||||||||||||| |||| ||||| |||||||||||| |||||  ||||| |||||    
T  22803271 agcgatgttgaatgatgtaacctatcgatttaaatgaatgaatatcaatttatttttg 22803328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 25162568 - 25162721
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||||||| ||||| || ||  | | ||| |     
T  25162568 atattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcggattcatcctt 25162667  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  25162668 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 25162721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 30648666 - 30648495
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||||||||| | || ||||||||| |||||||| | ||||||| || | ||||||| || |||||||||||  ||||||| ||||| || ||| | | |    
T  30648666 catgaatatttcggtaactttaattttatcatatatttttataggcaatatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattca 30648567  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatattgatttaattttg 209  Q
    || | || |||||||||| |||||||| | ||||||| || |||| ||||||| ||||||  ||||||||||    
T  30648566 tcctttatgtttttagcggtgttgaattatgtaatctctcgatttgaatgaatgaatattagtttaattttg 30648495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 36906254 - 36906407
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||||||||||||||||  ||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || ||| | | ||| |     
T  36906254 atattccagtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcctt 36906353  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  36906354 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 36906407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 25631495 - 25631315
Alignment:
Q  18 tcaacgttatagatacggatgc-atgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgt 115  Q
    |||||||| ||||| ||||||| ||| ||||||| |||||||||||| |||||||| | ||| ||| |||| || |||| || | |||||||||  |||     
T  25631495 tcaacgttgtagatccggatgccatggatattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgttattaacttggatga 25631396  T
Q  116 tgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||| ||||| || ||| | | ||| | ||| ||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  25631395 tgtgagtttgttcgcagattcatcctttacatttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 25631315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 43017036 - 43017131
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
    ||||||||||||| ||| ||||||| ||||||| ||||||||||||  |||||| ||||||||  || | | ||| | ||||||||||||||||||    
T  43017036 tatcatattatttgtaggcattttgccgttgtatgctattaacttaggtgttgtgagtttattcacatattcatcctttacgtttttagcgatgtt 43017131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 44907343 - 44907188
Alignment:
Q  42 gaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca 140  Q
    ||||||||| ||||||||||||  ||||||| | ||| ||| |||| ||||||| || |||||||| ||  ||||||| ||||| || ||| | | |||     
T  44907343 gaatattccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaatttggatgttgtgagtttgttcgcagattcatcc 44907244  T
Q  141 tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    | ||||||||||||| |||||||||| ||||| | || |||| ||||||| |||||    
T  44907243 tttacgtttttagcgttgttgaatgatgtaatatctcgatttgaatgaatgaatat 44907188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 3848861 - 3848708
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| || ||||||||| |||||||| ||||| ||| |||| || || | || |||||||||||  ||| ||| ||||| || ||| | | ||| |     
T  3848861 atattccggtgactttaattttatcatatatatttgtaggcattatgccgctatatgctattaacttggatgctgtgagtttgttcgcagattcatcctt 3848762  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  3848761 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 3848708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 12116230 - 12116383
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    |||||| |||||||||||||  ||||||| | ||| ||| |||| || |||| || |||||||||||  ||||||| ||||| ||   | | | ||| |     
T  12116230 atattctagtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcttagattcatcctt 12116329  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    |||||||||||||||||||||||| ||||||| || |||| ||||||| |||||    
T  12116330 tacgtttttagcgatgttgaatgatgtaatctctcgatttgaatgaatgaatat 12116383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 19862281 - 19862213
Alignment:
Q  52 gtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaa 120  Q
    |||||| ||||| |||||||||||||| ||||||||||||||| || |||||||| || ||| ||||||    
T  19862281 gtcactctaattttatcatattatttagagacattttgtcgttatatgctattaatttgaattttgtaa 19862213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 46934769 - 46934924
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| |||||||||||| |||||||| | ||| ||| |||   |||||| || |||||||||||  ||||||| ||||| || | | | | |    
T  46934769 catggatattccggtcactttaattttatcatatatttttgtaggcat---gtcgttatatgctattaacttggatgttgtgagtttgttcgtagattca 46934865  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    || | |||||||||||||||||||||||| | ||||| || |||| ||||||| |||||    
T  46934866 tcctttacgtttttagcgatgttgaatgatgcaatctctcgatttgaatgaatgaatat 46934924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 196
Target Start/End: Complemental strand, 628916 - 628730
Alignment:
Q  12 tggacatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaa 111  Q
    |||||||||||||| ||||| | || ||| || |||||  || | ||  ||| ||||||||||||| ||| ||||||| |||||||  ||||||||||      
T  628916 tggacatcaacgttgtagatccagaagcaagagtattctggtgatttagattatatcatattatttgtaggcattttgccgttgtattctattaacttgg 628817  T
Q  112 atgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga--atgacgtaatctatcaatttaaatgaataaatat 196  Q
     |||||| ||||| || ||| | | ||| | ||||||||||||||| ||||   ||| ||| ||||||||||| ||||||| |||||    
T  628816 gtgttgtgagtttgttcgcagattcatcctttacgtttttagcgatcttgattttgatgtattctatcaatttgaatgaatgaatat 628730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 6823472 - 6823413
Alignment:
Q  137 atcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||| || ||||||||||||||| ||| | ||||||||||||||||||||||| |||||    
T  6823472 atcatttaggtttttagcgatgtttaataatgtaatctatcaatttaaatgaatgaatat 6823413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 189
Target Start/End: Complemental strand, 39917345 - 39917195
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| |||||||||||||||||||| |||||||| | ||| ||| |||| || | || || |||||||||||  ||||||| ||||||||  || | | |    
T  39917345 catggatattccagtcactttaattttatcatatatttttgtaggcattatgcctttatatgctattaacttggatgttgtgagtttattcacagattca 39917246  T
Q  138 tcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaa 189  Q
    || | ||||||||||| | ||||||||||  |||||| ||||||| ||||||    
T  39917245 tcctttacgtttttagaggtgttgaatga-ttaatctctcaattttaatgaa 39917195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 160
Target Start/End: Complemental strand, 44959913 - 44959818
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
    ||||||||||||| ||| ||||||| | ||||| |||||||||||  ||| ||| |||||||||||| | | | | | ||||||||||||||||||    
T  44959913 tatcatattatttgtaggcattttgccattgtatgctattaacttggatgctgtgagtttatttgcagattcaccctttacgtttttagcgatgtt 44959818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 160
Target Start/End: Original strand, 4711580 - 4711725
Alignment:
Q  15 acatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatg 114  Q
    |||||||||||  |||| |||| |||||  |||| | || |||| | || ||||||||||||| ||| ||||||| ||||||| |||||||||||   ||    
T  4711580 acatcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtg 4711679  T
Q  115 ttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
    |||| ||||| |||||| | | ||| | || |||||||| ||||||    
T  4711680 ttgtgagtttgtttgcagattcatcctttatgtttttagtgatgtt 4711725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 17237937 - 17238090
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| |||||||||||| ||| |||| | ||| ||| |||| ||||||| || |||||||||||  ||| ||| ||||| || ||  | |  || |     
T  17237937 atattccggtcactttaattttattatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcgctgattcttcctt 17238036  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||| | ||||||| ||||||| |||||    
T  17238037 tacgtttttagcggtgttgaatgatgtaatatctcaatttgaatgaatgaatat 17238090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 32607597 - 32607754
Alignment:
Q  40 atgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattat 138  Q
    |||||||||||  |||||||||||  ||||||| | ||| ||| |||| || | || || ||||||||| |  ||||||| ||||| || ||| | | ||    
T  32607597 atgaatattccgatcactttaatttcatcatatatttttgtaggcattatgccattatatgctattaacctggatgttgtgagtttgttcgcagattcat 32607696  T
Q  139 catctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    | | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  32607697 cctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 32607754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 196
Target Start/End: Complemental strand, 35499102 - 35498989
Alignment:
Q  83 cattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaattt 182  Q
    |||| ||||||| || |||||||| ||  ||||||||||||| || ||| | | ||| | ||||||||||||| |||||||||| ||||||  || ||||    
T  35499102 cattatgtcgttatatgctattaatttggatgttgtaagttttttcgcagattcatcctttacgtttttagcggtgttgaatgatgtaatccctcgattt 35499003  T
Q  183 aaatgaataaatat 196  Q
     ||||||| |||||    
T  35499002 gaatgaatgaatat 35498989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 66 - 196
Target Start/End: Complemental strand, 50194274 - 50194142
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga--a 163  Q
    |||||||| ||| ||| ||||||| |||| || |||||||||||  ||||||| ||||| || ||| | | ||| | ||||||||||||||||||||       
T  50194274 atcatattttttgtaggcattttgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagcgatgttgattc 50194175  T
Q  164 tgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||| ||| | ||||||||| ||||||| |||||    
T  50194174 tgatgtattatatcaatttgaatgaatgaatat 50194142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 9797474 - 9797430
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  9797474 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 9797430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 16235575 - 16235671
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 162  Q
    ||||||||| || ||| ||||||||||||||| |||||||||||  ||| ||| ||||| || ||| | ||| | | ||||||||||||||| ||||    
T  16235575 atcatattacttgtaggcattttgtcgttgtatgctattaacttggatggtgtgagtttgttcgcagatttaccctatacgtttttagcgatattga 16235671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 156
Target Start/End: Original strand, 19619861 - 19619952
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcga 156  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||| | ||||| | |||||  | ||| | | ||||| ||||||||||||||    
T  19619861 tatcatattatttgtaggcattttgccgttgtatgctattaactaagatgttttgagtttgatcgcagattcatcatttacgtttttagcga 19619952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 160
Target Start/End: Complemental strand, 21533749 - 21533654
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||   || ||| ||||| || ||| | ||| | | ||||||||||||||||||    
T  21533749 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagatttaccttttacgtttttagcgatgtt 21533654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 27706165 - 27706122
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||    
T  27706165 atcatattatttgtaggcattttgtcgttgtatgctattaactt 27706122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 149
Target Start/End: Complemental strand, 42455759 - 42455676
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgttt 149  Q
    ||||||||| || ||| ||||||||||||||| |||||||||||  ||||||| ||||| || ||| | ||| ||| |||||||    
T  42455759 atcatattagttgtagtcattttgtcgttgtatgctattaacttcgatgttgtgagtttgttcgcagatttaccatttacgttt 42455676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 160
Target Start/End: Complemental strand, 45568385 - 45568290
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||   || ||| |||||||| ||| | | | | | ||||||||||||||||||    
T  45568385 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttattcgcagattcaccctttacgtttttagcgatgtt 45568290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 46322302 - 46322223
Alignment:
Q  18 tcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgta 97  Q
    |||||||| |||||||||| |||| |||||||  || |||||| || |||||||||||||| |  ||||||||| |||||    
T  46322302 tcaacgttgtagatacggaggcatcaatattcttgtgactttacttttatcatattatttaaaagcattttgtcattgta 46322223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 51629034 - 51628951
Alignment:
Q  99 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaattt 182  Q
    |||||||||||||||| ||| | |||||||||||| | ||| | ||| |||| ||||||||||||| |  || |||||||||||    
T  51629034 gctattaacttaaatgatgtgaatttatttgcaaattcatcttttactttttcagcgatgttgaattatttactctatcaattt 51628951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 160
Target Start/End: Complemental strand, 7448853 - 7448759
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
    |||||||||||| ||||||||||| || |||| ||||||||||||  || ||| ||||| || ||| | | | ||| |||||||||| |||||||    
T  7448853 atcatattatttgtagacattttgccgctgtatgctattaacttaggtgatgtgagtttgttcgcagattcaccatttacgtttttatcgatgtt 7448759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 160
Target Start/End: Complemental strand, 7456995 - 7456901
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
    |||||||||||| ||||||||||| || |||| ||||||||||||  || ||| ||||| || ||| | | | ||| |||||||||| |||||||    
T  7456995 atcatattatttgtagacattttgccgctgtatgctattaacttaggtgatgtgagtttgttcgcagattcaccatttacgtttttatcgatgtt 7456901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 26275785 - 26275715
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||| |||| |||| ||||  ||| ||||||||||||| ||| ||||||||| ||||| |||||||||||    
T  26275785 catgagtatttcagtgacttatattttatcatattatttgtaggcattttgtcattgtatgctattaactt 26275715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 38440433 - 38440380
Alignment:
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  38440433 tacgtttttagcggtgttgaatgatgtaatctttcgatttgaatgaatgaatat 38440380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 46178674 - 46178847
Alignment:
Q  18 tcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgtt 116  Q
    ||||||||  |||| |||| |||||  |||||| |||||||| ||| |||||||| | ||| ||  |||| ||||||| || |||||||||||  ||| |    
T  46178674 tcaacgttgcagatccggaggcatgggtattccggtcacttttattttatcatatatttttgtaagcattatgtcgttatatgctattaacttggatgat 46178773  T
Q  117 gtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaat 190  Q
    || ||||| || |||   ||||| | |||||||||| || ||||||||||  |||| |||| |||| |||||||    
T  46178774 gtgagtttgttcgcagttttatcttttacgtttttaacggtgttgaatgatataatatatcgatttgaatgaat 46178847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 130
Target Start/End: Complemental strand, 47176119 - 47176038
Alignment:
Q  49 ccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgc 130  Q
    ||||||| ||| ||| ||||||||||||| |||  | || ||||||| | ||||||||||| |||||||| ||||| |||||    
T  47176119 ccagtcaatttgattttatcatattatttgtaggtaattagtcgttgaatgctattaacttgaatgttgtgagtttgtttgc 47176038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 162
Target Start/End: Complemental strand, 53807798 - 53807701
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 162  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||   || ||| ||||| || ||| | | ||| | ||||||||||||||| ||||    
T  53807798 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtggtgtgagtttgttcgcagattcatcctttacgtttttagcgatcttga 53807701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 8914861 - 8914957
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 162  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||| | || ||| ||||| || ||| | | | | | ||||||||||||||| ||||    
T  8914861 atcatattatttgtaggcattttgccgttgtatgctattaacttgagtgatgtgagtttgttcgcagattcaccttatacgtttttagcgatattga 8914957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 9998615 - 9998659
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  9998615 tatcatattatttgtaggcattttgccgttgtatgctattaactt 9998659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 10108384 - 10108428
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  10108384 tatcatattatttgtaggcattttgccgttgtatgctattaactt 10108428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 10229624 - 10229668
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  10229624 tatcatattatttgtaggcattttgccgttgtatgctattaactt 10229668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 10233218 - 10233262
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  10233218 tatcatattatttgtaggcattttgccgttgtatgctattaactt 10233262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 21313184 - 21313228
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  21313184 tatcatattatttgtagccattttgccgttgtatgctattaactt 21313228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 196
Target Start/End: Complemental strand, 24396417 - 24396305
Alignment:
Q  84 attttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaattta 183  Q
    |||||| |||| || ||||||||||| ||||||||  |||| |   |||| | ||||| || ||||||||| || |||||||| ||| |||||||||||     
T  24396417 attttgccgttttatgctattaacttgaatgttgtgtgtttgtacacaaattcatcatttaagtttttagcaatattgaatgatgtactctatcaatttg 24396318  T
Q  184 aatgaataaatat 196  Q
    ||| ||| |||||    
T  24396317 aattaatgaatat 24396305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 38860052 - 38860008
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  38860052 tatcatattatttgtaggcattttgccgttgtatgctattaactt 38860008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 42460897 - 42460941
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| |||||||| |||||| |||||||||||    
T  42460897 tatcatattatttgtaggcattttgttgttgtatgctattaactt 42460941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 42719646 - 42719730
Alignment:
Q  41 tgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 124  Q
    |||||||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || || |||||||| |||  |||||||||    
T  42719646 tgaatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgccattaacttgaatactgtaagttt 42719730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 48650674 - 48650630
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  48650674 tatcatattatttgtaggcattttgccgttgtatgctattaactt 48650630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 51923876 - 51923972
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 162  Q
    |||||||||||| ||| ||||||| ||||||| |||||||||||   |||||| ||||| || ||| |   ||| | ||||||||||||||| ||||    
T  51923876 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatatccatcctatacgtttttagcgatattga 51923972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 196
Target Start/End: Complemental strand, 361774 - 361588
Alignment:
Q  12 tggacatcaacgttatagatacggatgc-atgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||| |||||||| ||||| |||| || ||| ||| |||||||||||||||| | |||||| | ||| ||| |||| || |||| || | | |||||||    
T  361774 tggacgtcaacgttgtagatccggaggccatggatactccagtcactttaattttctcatatatttttgtaggcattatgccgttatatgttgttaactt 361675  T
Q  110 aaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
      ||||||| ||| | || ||| | ||||| | ||||||||||||| |||||||||| ||||||| ||||| | ||||||| |||||    
T  361674 ggatgttgtgagtgtgttcgcagatttatcctttacgtttttagcggtgttgaatgatgtaatctctcaatatgaatgaatgaatat 361588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 196
Target Start/End: Complemental strand, 58027 - 57895
Alignment:
Q  66 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga--a 163  Q
    |||||||| ||| ||| ||||||| |||| || |||||||||||  ||| ||| ||||| || ||| | ||||| | |||||||||||||||||| |       
T  58027 atcatattttttgtaggcattttgccgttatatgctattaacttggatgctgtgagtttgttcgcagatttatcctttacgtttttagcgatgttaattc 57928  T
Q  164 tgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||| ||| ||||||||||||||||||| |||||    
T  57927 tgatgtattctatcaatttaaatgaatgaatat 57895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 36538 - 36486
Alignment:
Q  137 atcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaa 189  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  36538 atcatttacgtttttagcgatgttgaatgaagtactctatcaatttgaatgaa 36486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 1493 - 1588
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
    ||||||||||||| ||| ||||||| |||| || |||||||||||  ||||||| ||||| |||||| | | | | | ||||||||||||||||||    
T  1493 tatcatattatttgtaggcattttgccgttttatgctattaacttggatgttgtgagtttgtttgcagattcaccctttacgtttttagcgatgtt 1588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 160
Target Start/End: Complemental strand, 71236 - 71145
Alignment:
Q  69 atattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 160  Q
    ||||||||| ||| |||||||| |||||| |||||||||||   |||||||||||| |||| | | | ||| | ||||||||||||||||||    
T  71236 atattatttgtaggcattttgttgttgtatgctattaacttgggtgttgtaagtttgtttgtagattaatcctttacgtttttagcgatgtt 71145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 53345 - 53207
Alignment:
Q  58 ttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgat 157  Q
    |||||| ||||||||||| |  ||||||||||||  |||| |||||||| ||  | ||||| ||||| || | | | ||||| | || |||||||| |||    
T  53345 ttaattttatcatattatatgcagacattttgtcactgtatgctattaaattggaggttgttagtttgttcgtagatttatcttttatgtttttagtgat 53246  T
Q  158 gttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||| ||| | ||||||||| ||||||| |||||    
T  53245 gttgaatgatgtactatatcaatttgaatgaatgaatat 53207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 16262 - 16109
Alignment:
Q  44 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 142  Q
    ||||||| |||||||||||| ||| |||| | ||| ||| |||| ||||||| || |||||||||||  ||| ||| ||||| || ||  | |  || |     
T  16262 atattccggtcactttaattttattatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcgctgattcttcctt 16163  T
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||| | ||||||| ||||||| |||||    
T  16162 tacgtttttagcggtgttgaatgatgtaatatctcaatttgaatgaatgaatat 16109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 65982 - 65938
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  65982 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 65938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 6179 - 6245
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgca 131  Q
    ||||||||||||| |||||||||||| |||  | |||||||||||  ||||||| ||||| ||||||    
T  6179 tatcatattatttgtagacattttgttgttacaagctattaacttggatgttgtgagtttgtttgca 6245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 4440 - 4493
Alignment:
Q  143 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    ||||||||||||| |||||||||| ||||||| |  |||||||||||| |||||    
T  4440 tacgtttttagcggtgttgaatgatgtaatctcttgatttaaatgaatgaatat 4493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 182
Target Start/End: Complemental strand, 9599 - 9474
Alignment:
Q  57 tttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcga 156  Q
    ||||||| |||||||||| || |  |||||||||||||||| | || ||||||  | || || ||||| || ||||| | ||| | | | |||||| |||    
T  9599 tttaattttatcatattagttgtcaacattttgtcgttgtatgatactaacttggaagtcgtgagtttgttcgcaaactcatcctttccatttttaacga 9500  T
Q  157 tgttgaatgacgtaatctatcaattt 182  Q
    | |||||||| |||||||||||||||    
T  9499 tcttgaatgatgtaatctatcaattt 9474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 50872 - 50969
Alignment:
Q  12 tggacatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||| ||||||||  |||| |||| ||||| ||||| | || |||| | || ||||||||||||| ||| ||||||| | ||||| |||||||||||    
T  50872 tggacgtcaacgttgcagatccggaagcatggatatttcggtgacttaagttttatcatattatttgtaggcattttgccattgtatgctattaactt 50969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 196
Target Start/End: Complemental strand, 83322 - 83226
Alignment:
Q  99 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 196  Q
    |||||||||||  ||||||| ||||| || ||| | | ||||| ||||||||||||||| |||||||| ||||||| |  |||| ||||||| |||||    
T  83322 gctattaacttggatgttgtgagtttgttcgcagattcatcatttacgtttttagcgat-ttgaatgatgtaatctcttgatttgaatgaatgaatat 83226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 32749 - 32628
Alignment:
Q  3 gcaatgagatggacatcaacgttatagatacggatgcatgaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgcta 102  Q
    |||||||  ||||| ||||||||  ||||  ||| |||||| |||| | || ||||  ||| ||||||||||||| ||| |||||||||| ||||  |||    
T  32749 gcaatgatttggacgtcaacgttgcagatctggaagcatgagtatttcggtgacttagattttatcatattatttgtaggcattttgtcgctgtatacta 32650  T
Q  103 ttaacttaaatgttgtaagttt 124  Q
    ||||||| | |||||| |||||    
T  32649 ttaacttgagtgttgtgagttt 32628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 166
Target Start/End: Original strand, 5528 - 5656
Alignment:
Q  39 catgaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaatta 137  Q
    |||| ||||||| || ||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||  ||||||||| || ||||| | |    
T  5528 catggatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatactgtaagtttgttcgcaaattca 5627  T
Q  138 tcatctacgtttttagcgatgttgaatga 166  Q
    || | |||||||||| || ||||||||||    
T  5628 tcctttacgtttttaacggtgttgaatga 5656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 71810 - 71766
Alignment:
Q  65 tatcatattatttatagacattttgtcgttgtacgctattaactt 109  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  71810 tatcatattatttgtaggcattttgccgttgtatgctattaactt 71766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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