View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1271_high_143 (Length: 252)

Name: NF1271_high_143
Description: NF1271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1271_high_143
NF1271_high_143
[»] chr6 (39 HSPs)
chr6 (1-174)||(392109-392282)
chr6 (1-175)||(3515779-3515953)
chr6 (1-174)||(4215708-4215881)
chr6 (1-174)||(27433505-27433678)
chr6 (1-174)||(32929508-32929681)
chr6 (8-168)||(2350672-2350832)
chr6 (1-174)||(32985193-32985366)
chr6 (10-174)||(26467124-26467288)
chr6 (19-174)||(2580983-2581138)
chr6 (12-170)||(3026013-3026171)
chr6 (9-174)||(23402159-23402324)
chr6 (7-174)||(18276612-18276782)
chr6 (9-174)||(12525740-12525905)
chr6 (28-175)||(12145116-12145263)
chr6 (2-177)||(35043904-35044077)
chr6 (28-177)||(1391175-1391324)
chr6 (20-146)||(34851877-34852003)
chr6 (1-142)||(7851191-7851332)
chr6 (28-174)||(13416960-13417108)
chr6 (19-174)||(25165413-25165568)
chr6 (12-143)||(29451146-29451277)
chr6 (2-151)||(11115120-11115267)
chr6 (16-174)||(28225249-28225406)
chr6 (12-174)||(21878353-21878509)
chr6 (29-175)||(31280362-31280502)
chr6 (30-143)||(961051-961164)
chr6 (7-143)||(23629607-23629743)
chr6 (28-145)||(29978272-29978389)
chr6 (14-146)||(1840275-1840407)
chr6 (1-115)||(20897961-20898075)
chr6 (7-115)||(34477609-34477717)
chr6 (32-143)||(5323444-5323555)
chr6 (28-152)||(9661026-9661150)
chr6 (1-105)||(34396596-34396700)
chr6 (10-87)||(13529477-13529554)
chr6 (99-151)||(22417304-22417356)
chr6 (106-187)||(1127934-1128015)
chr6 (102-174)||(34706835-34706907)
chr6 (112-174)||(34494276-34494338)
[»] chr4 (57 HSPs)
chr4 (1-177)||(789527-789703)
chr4 (1-174)||(16536061-16536234)
chr4 (7-174)||(7768957-7769124)
chr4 (1-184)||(4268812-4268995)
chr4 (1-174)||(4089155-4089328)
chr4 (9-175)||(43944528-43944693)
chr4 (1-174)||(18067879-18068052)
chr4 (19-174)||(37987966-37988121)
chr4 (33-175)||(6164138-6164280)
chr4 (1-174)||(43202384-43202556)
chr4 (2-174)||(29591203-29591375)
chr4 (1-175)||(15186256-15186424)
chr4 (19-174)||(36395130-36395285)
chr4 (28-174)||(50619126-50619271)
chr4 (1-175)||(54897321-54897495)
chr4 (1-174)||(32202481-32202653)
chr4 (19-175)||(12356275-12356431)
chr4 (10-149)||(24679668-24679806)
chr4 (2-174)||(32217059-32217230)
chr4 (12-144)||(42898774-42898908)
chr4 (2-172)||(54655879-54656048)
chr4 (9-174)||(33108673-33108837)
chr4 (10-142)||(4220217-4220348)
chr4 (19-178)||(19503101-19503260)
chr4 (28-175)||(30154162-30154309)
chr4 (19-174)||(50603258-50603414)
chr4 (9-141)||(3783534-3783666)
chr4 (11-175)||(54945779-54945941)
chr4 (19-141)||(39843938-39844060)
chr4 (28-146)||(46148979-46149097)
chr4 (1-151)||(47231895-47232045)
chr4 (12-173)||(28755644-28755803)
chr4 (1-174)||(55882697-55882868)
chr4 (38-150)||(30387158-30387270)
chr4 (52-175)||(39877246-39877371)
chr4 (28-146)||(53655906-53656024)
chr4 (28-143)||(52533816-52533931)
chr4 (48-174)||(16820912-16821038)
chr4 (8-175)||(5091611-5091776)
chr4 (19-143)||(31680494-31680618)
chr4 (28-130)||(49915199-49915301)
chr4 (40-146)||(31517217-31517324)
chr4 (1-115)||(54054561-54054675)
chr4 (19-115)||(42815140-42815237)
chr4 (34-115)||(46688264-46688345)
chr4 (39-146)||(41265510-41265616)
chr4 (32-149)||(53268764-53268880)
chr4 (1-84)||(50167604-50167685)
chr4 (67-174)||(53003956-53004063)
chr4 (63-144)||(8133782-8133862)
chr4 (19-142)||(52697083-52697205)
chr4 (13-168)||(1432554-1432703)
chr4 (102-174)||(37402759-37402830)
chr4 (32-146)||(17344687-17344800)
chr4 (124-174)||(54054665-54054715)
chr4 (132-174)||(8749796-8749838)
chr4 (102-174)||(28119906-28119978)
[»] chr3 (53 HSPs)
chr3 (1-174)||(39074432-39074604)
chr3 (1-174)||(52520694-52520867)
chr3 (9-174)||(43786892-43787057)
chr3 (1-175)||(272233-272407)
chr3 (9-174)||(4168204-4168369)
chr3 (1-175)||(49893344-49893518)
chr3 (1-175)||(46352647-46352821)
chr3 (7-144)||(53489854-53489991)
chr3 (32-177)||(10617281-10617426)
chr3 (9-146)||(20924013-20924150)
chr3 (1-174)||(48725284-48725457)
chr3 (19-174)||(2938040-2938195)
chr3 (28-174)||(858629-858775)
chr3 (9-174)||(40362580-40362745)
chr3 (19-146)||(2505380-2505507)
chr3 (7-142)||(41553972-41554107)
chr3 (9-174)||(42964249-42964414)
chr3 (32-174)||(41993620-41993761)
chr3 (21-146)||(42548128-42548253)
chr3 (30-174)||(11308211-11308354)
chr3 (2-174)||(18014686-18014858)
chr3 (45-175)||(6842676-6842806)
chr3 (7-177)||(7468430-7468598)
chr3 (28-168)||(22248926-22249066)
chr3 (14-174)||(43269739-43269899)
chr3 (1-136)||(2119444-2119577)
chr3 (40-173)||(33140937-33141070)
chr3 (9-169)||(41304026-41304184)
chr3 (19-146)||(28139340-28139467)
chr3 (1-174)||(50395563-50395735)
chr3 (7-146)||(49529294-49529436)
chr3 (21-149)||(50298970-50299098)
chr3 (7-146)||(50359214-50359353)
chr3 (28-174)||(13159937-13160082)
chr3 (9-177)||(52246603-52246771)
chr3 (11-141)||(29241660-29241790)
chr3 (32-173)||(24488410-24488551)
chr3 (32-143)||(38852258-38852372)
chr3 (28-150)||(31514831-31514952)
chr3 (63-146)||(52552549-52552631)
chr3 (175-239)||(26818312-26818376)
chr3 (11-69)||(2391630-2391688)
chr3 (11-69)||(2393391-2393449)
chr3 (32-119)||(21010041-21010124)
chr3 (32-147)||(25743854-25743968)
chr3 (175-243)||(26815178-26815246)
chr3 (36-115)||(2362880-2362958)
chr3 (49-87)||(6842604-6842642)
chr3 (19-73)||(52718198-52718252)
chr3 (64-146)||(17752762-17752842)
chr3 (64-146)||(19054082-19054162)
chr3 (175-233)||(26824092-26824150)
chr3 (28-144)||(53054841-53054959)
[»] chr1 (66 HSPs)
chr1 (1-174)||(51065748-51065921)
chr1 (1-174)||(42769990-42770163)
chr1 (9-174)||(18043183-18043348)
chr1 (9-174)||(47010014-47010179)
chr1 (9-173)||(38162871-38163035)
chr1 (1-175)||(30294380-30294554)
chr1 (8-174)||(38701937-38702099)
chr1 (1-173)||(13961225-13961396)
chr1 (1-175)||(9266727-9266901)
chr1 (7-177)||(24178460-24178630)
chr1 (28-174)||(45431318-45431464)
chr1 (9-174)||(5694342-5694507)
chr1 (1-174)||(12072062-12072235)
chr1 (1-174)||(29657784-29657957)
chr1 (11-174)||(15227762-15227925)
chr1 (1-174)||(14350279-14350450)
chr1 (19-146)||(51368813-51368940)
chr1 (4-146)||(43286738-43286880)
chr1 (28-174)||(6770377-6770519)
chr1 (28-174)||(50128172-50128318)
chr1 (19-174)||(45449244-45449399)
chr1 (28-174)||(19031815-19031961)
chr1 (8-182)||(48383103-48383277)
chr1 (19-148)||(3097690-3097819)
chr1 (1-174)||(3784713-3784886)
chr1 (7-174)||(17333284-17333449)
chr1 (32-152)||(35985643-35985763)
chr1 (9-177)||(48071503-48071670)
chr1 (1-175)||(41730318-41730495)
chr1 (9-115)||(29210434-29210540)
chr1 (1-146)||(29683208-29683354)
chr1 (32-146)||(36446353-36446467)
chr1 (19-174)||(8472914-8473069)
chr1 (28-179)||(47532666-47532816)
chr1 (19-175)||(23473463-23473619)
chr1 (31-146)||(12306961-12307075)
chr1 (19-136)||(38335200-38335317)
chr1 (28-175)||(30657648-30657789)
chr1 (39-168)||(52431632-52431761)
chr1 (10-143)||(52749624-52749757)
chr1 (32-175)||(30217806-30217947)
chr1 (34-136)||(37503260-37503361)
chr1 (32-168)||(3838783-3838919)
chr1 (19-88)||(15282600-15282669)
chr1 (83-175)||(19010686-19010778)
chr1 (32-168)||(39081845-39081980)
chr1 (32-142)||(37315300-37315409)
chr1 (32-88)||(26228237-26228293)
chr1 (28-111)||(39497347-39497430)
chr1 (8-58)||(19011112-19011162)
chr1 (32-85)||(35700739-35700792)
chr1 (10-85)||(39912368-39912443)
chr1 (124-174)||(21112681-21112731)
chr1 (124-174)||(29210530-29210580)
chr1 (46-84)||(19011057-19011095)
chr1 (124-174)||(21117423-21117473)
chr1 (32-82)||(49867474-49867524)
chr1 (102-175)||(28725904-28725977)
chr1 (102-175)||(38595751-38595824)
chr1 (110-174)||(26228300-26228364)
chr1 (19-88)||(28481875-28481940)
chr1 (67-117)||(14881036-14881086)
chr1 (102-168)||(30664173-30664239)
chr1 (32-85)||(16590304-16590356)
chr1 (102-178)||(23822519-23822593)
chr1 (28-68)||(10976008-10976048)
[»] chr5 (32 HSPs)
chr5 (7-174)||(34650833-34651000)
chr5 (1-174)||(11957967-11958140)
chr5 (1-174)||(8787352-8787525)
chr5 (30-174)||(40564404-40564548)
chr5 (1-174)||(13661821-13661994)
chr5 (1-175)||(10054352-10054525)
chr5 (1-174)||(35132535-35132707)
chr5 (1-174)||(35504241-35504413)
chr5 (1-174)||(11846085-11846258)
chr5 (27-152)||(12506335-12506460)
chr5 (1-180)||(21547388-21547566)
chr5 (9-168)||(6283583-6283742)
chr5 (28-141)||(9721640-9721753)
chr5 (33-174)||(10955997-10956137)
chr5 (11-120)||(13470174-13470283)
chr5 (1-142)||(20175240-20175381)
chr5 (12-137)||(39069405-39069527)
chr5 (1-115)||(10069982-10070095)
chr5 (28-146)||(19436866-19436982)
chr5 (9-115)||(19647717-19647823)
chr5 (7-175)||(40057326-40057494)
chr5 (19-147)||(31909662-31909785)
chr5 (19-136)||(39066973-39067091)
chr5 (7-88)||(4837276-4837357)
chr5 (2-88)||(2619643-2619729)
chr5 (46-143)||(4268620-4268716)
chr5 (32-85)||(6284839-6284892)
chr5 (102-175)||(31467834-31467907)
chr5 (32-85)||(5302368-5302422)
chr5 (137-174)||(8927556-8927593)
chr5 (125-174)||(10070086-10070135)
chr5 (35-136)||(22973732-22973832)
[»] chr8 (49 HSPs)
chr8 (1-173)||(30675574-30675745)
chr8 (9-179)||(168487-168657)
chr8 (7-175)||(16888543-16888711)
chr8 (1-177)||(34228695-34228871)
chr8 (1-184)||(20831543-20831726)
chr8 (9-174)||(27988500-27988664)
chr8 (9-174)||(28045802-28045966)
chr8 (1-174)||(13643025-13643197)
chr8 (1-174)||(13743450-13743622)
chr8 (2-151)||(33357152-33357301)
chr8 (7-146)||(21595865-21596004)
chr8 (9-174)||(4537744-4537909)
chr8 (1-174)||(42034981-42035154)
chr8 (7-174)||(2805260-2805427)
chr8 (28-175)||(7304517-7304664)
chr8 (1-176)||(16394059-16394234)
chr8 (1-176)||(43119230-43119404)
chr8 (9-174)||(11112660-11112825)
chr8 (11-172)||(16890482-16890643)
chr8 (6-169)||(9253907-9254069)
chr8 (19-146)||(12203885-12204012)
chr8 (19-146)||(12448313-12448440)
chr8 (28-143)||(36730484-36730599)
chr8 (8-147)||(4648214-4648353)
chr8 (8-146)||(29444168-29444306)
chr8 (12-143)||(16785110-16785241)
chr8 (11-146)||(28626791-28626926)
chr8 (8-174)||(9063052-9063218)
chr8 (19-175)||(9537823-9537979)
chr8 (19-174)||(32113939-32114095)
chr8 (13-175)||(40831302-40831464)
chr8 (28-174)||(3930233-3930379)
chr8 (19-143)||(37373236-37373360)
chr8 (53-177)||(24843277-24843400)
chr8 (51-172)||(39406905-39407024)
chr8 (19-131)||(10870383-10870495)
chr8 (32-175)||(29235279-29235422)
chr8 (20-88)||(9278244-9278312)
chr8 (28-115)||(34192815-34192902)
chr8 (32-135)||(42433583-42433685)
chr8 (39-121)||(22451835-22451916)
chr8 (12-174)||(22956730-22956892)
chr8 (12-88)||(10618042-10618118)
chr8 (28-88)||(17467643-17467703)
chr8 (1-65)||(12652643-12652707)
chr8 (42-85)||(30933410-30933453)
chr8 (32-85)||(16196893-16196947)
chr8 (32-85)||(33124581-33124635)
chr8 (102-174)||(43714188-43714260)
[»] chr7 (50 HSPs)
chr7 (1-175)||(24438490-24438664)
chr7 (2-175)||(29993486-29993659)
chr7 (1-174)||(34333297-34333469)
chr7 (9-175)||(5239306-5239472)
chr7 (1-174)||(12218437-12218609)
chr7 (28-177)||(24798400-24798549)
chr7 (8-174)||(30810675-30810841)
chr7 (12-174)||(42044294-42044455)
chr7 (11-177)||(4628589-4628755)
chr7 (9-174)||(34606282-34606447)
chr7 (1-170)||(18485974-18486143)
chr7 (19-151)||(45045801-45045933)
chr7 (19-181)||(525069-525230)
chr7 (19-174)||(13064876-13065032)
chr7 (31-174)||(23363167-23363310)
chr7 (19-185)||(28587940-28588106)
chr7 (1-146)||(43594064-43594209)
chr7 (1-173)||(5729359-5729531)
chr7 (14-151)||(8754608-8754745)
chr7 (19-173)||(11686324-11686479)
chr7 (19-144)||(47083086-47083211)
chr7 (8-151)||(47839512-47839655)
chr7 (11-146)||(47657003-47657136)
chr7 (32-146)||(7689228-7689342)
chr7 (28-146)||(18117183-18117301)
chr7 (28-146)||(33636492-33636610)
chr7 (19-143)||(46716669-46716793)
chr7 (11-169)||(1737003-1737160)
chr7 (38-174)||(37674106-37674240)
chr7 (19-142)||(29835735-29835859)
chr7 (9-144)||(28262052-28262182)
chr7 (7-112)||(27456175-27456280)
chr7 (19-115)||(34546373-34546469)
chr7 (32-141)||(18220704-18220812)
chr7 (33-175)||(22739868-22740011)
chr7 (9-112)||(37631604-37631707)
chr7 (28-151)||(23357733-23357853)
chr7 (14-86)||(4100612-4100684)
chr7 (63-126)||(47118037-47118100)
chr7 (32-85)||(4087667-4087720)
chr7 (32-85)||(18220527-18220580)
chr7 (32-81)||(18220624-18220673)
chr7 (32-121)||(18469993-18470081)
chr7 (32-119)||(36437421-36437507)
chr7 (32-85)||(3021935-3021988)
chr7 (32-85)||(5785509-5785563)
chr7 (102-174)||(38128406-38128478)
chr7 (102-146)||(19434608-19434652)
chr7 (9-57)||(22973619-22973667)
chr7 (34-85)||(38022580-38022632)
[»] chr2 (40 HSPs)
chr2 (2-176)||(30486224-30486398)
chr2 (1-172)||(561520-561691)
chr2 (1-174)||(4381808-4381981)
chr2 (1-174)||(27856396-27856569)
chr2 (19-174)||(22567633-22567788)
chr2 (1-174)||(20552944-20553117)
chr2 (8-174)||(31438666-31438832)
chr2 (1-174)||(44587915-44588088)
chr2 (19-174)||(3668113-3668268)
chr2 (11-184)||(6580212-6580382)
chr2 (9-175)||(31390033-31390199)
chr2 (9-175)||(22887771-22887937)
chr2 (7-174)||(22068320-22068486)
chr2 (1-146)||(32860115-32860259)
chr2 (1-166)||(38590883-38591047)
chr2 (1-176)||(32360867-32361042)
chr2 (7-174)||(34442533-34442699)
chr2 (28-174)||(26387064-26387210)
chr2 (28-174)||(8969407-8969553)
chr2 (2-168)||(1859176-1859342)
chr2 (11-174)||(35851750-35851914)
chr2 (11-174)||(28600990-28601152)
chr2 (19-173)||(2898102-2898256)
chr2 (19-173)||(13574031-13574184)
chr2 (19-146)||(27584769-27584896)
chr2 (28-174)||(5093540-5093685)
chr2 (28-173)||(4022480-4022624)
chr2 (8-141)||(5881237-5881374)
chr2 (11-128)||(38296200-38296317)
chr2 (21-137)||(11021259-11021375)
chr2 (1-115)||(26891722-26891836)
chr2 (19-168)||(43637195-43637343)
chr2 (28-146)||(25782861-25782976)
chr2 (32-175)||(39531868-39532009)
chr2 (32-121)||(15079012-15079100)
chr2 (28-147)||(25772150-25772270)
chr2 (39-147)||(15146683-15146790)
chr2 (32-144)||(29102313-29102425)
chr2 (32-142)||(34123057-34123166)
chr2 (32-136)||(10820528-10820630)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-174)||(53685-53858)
[»] scaffold0014 (1 HSPs)
scaffold0014 (2-176)||(68288-68462)
[»] scaffold0264 (1 HSPs)
scaffold0264 (1-174)||(22974-23147)
[»] scaffold0190 (1 HSPs)
scaffold0190 (1-175)||(14909-15083)
[»] scaffold0524 (1 HSPs)
scaffold0524 (28-167)||(865-1004)
[»] scaffold0021 (1 HSPs)
scaffold0021 (1-174)||(116217-116390)
[»] scaffold1152 (1 HSPs)
scaffold1152 (1-176)||(691-865)
[»] scaffold0188 (1 HSPs)
scaffold0188 (1-174)||(6110-6283)
[»] scaffold0045 (2 HSPs)
scaffold0045 (9-146)||(50569-50706)
scaffold0045 (19-182)||(53349-53501)
[»] scaffold0425 (1 HSPs)
scaffold0425 (49-175)||(10771-10897)
[»] scaffold0038 (1 HSPs)
scaffold0038 (16-174)||(25747-25904)
[»] scaffold0034 (1 HSPs)
scaffold0034 (28-174)||(95585-95730)
[»] scaffold1266 (1 HSPs)
scaffold1266 (7-147)||(311-451)
[»] scaffold0113 (1 HSPs)
scaffold0113 (28-175)||(40959-41106)
[»] scaffold0050 (2 HSPs)
scaffold0050 (28-174)||(69266-69411)
scaffold0050 (32-142)||(33714-33823)
[»] scaffold0002 (1 HSPs)
scaffold0002 (28-174)||(146906-147051)
[»] scaffold0674 (1 HSPs)
scaffold0674 (7-115)||(7956-8064)
[»] scaffold0549 (1 HSPs)
scaffold0549 (7-115)||(7307-7415)
[»] scaffold0007 (1 HSPs)
scaffold0007 (60-174)||(233925-234039)
[»] scaffold0325 (1 HSPs)
scaffold0325 (28-143)||(17502-17616)
[»] scaffold0263 (1 HSPs)
scaffold0263 (7-146)||(19613-19752)
[»] scaffold0206 (1 HSPs)
scaffold0206 (19-115)||(11029-11125)
[»] scaffold0533 (1 HSPs)
scaffold0533 (39-85)||(5090-5136)
[»] scaffold0015 (1 HSPs)
scaffold0015 (21-121)||(74526-74627)
[»] scaffold1128 (1 HSPs)
scaffold1128 (32-79)||(1415-1462)


Alignment Details
Target: chr6 (Bit Score: 134; Significance: 7e-70; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 392109 - 392282
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||    
T  392109 cggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacag 392208  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  392209 tttccttttatggtaataattctcttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 392282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 3515779 - 3515953
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| |||| |||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||    
T  3515779 cggtgcccccagggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacag 3515878  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||||||||||||||||||||| ||||||||||||| |||||| || ||||| ||||||||||||||||||||||    
T  3515879 tttccttttatggtaataattcccttttatggtatgtttaacctgtgccccaggggcaccggttagcaggaccca 3515953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 4215708 - 4215881
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| ||||||  |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||  ||    
T  4215708 cggtgcccccggggcactggttaagagtatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacag 4215807  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||  ||||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  4215808 tttccttttatggtaataatttccttttatggtatgcttaaccagtgccccgggggcatcggttagcaggaccc 4215881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 27433505 - 27433678
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| |||| |||    
T  27433505 cggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttatcataatgtcaaaaatag 27433604  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||| ||||||||||||| |||||| || ||||  ||||||||||||||| |||||    
T  27433605 tttccttttatggtaataattcccttttatggtatgtttaacccgttccccgggggcaccggttagcaagaccc 27433678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 32929681 - 32929508
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||  |||||| ||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||| || ||||  ||    
T  32929681 cggtgcccccggggcaatggttaagggtatgaaaaaggaaattatatattaattaatgcattgaaattgtgtaattaatttataataaagtcaaaaacag 32929582  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  32929581 tttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 32929508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 2350672 - 2350832
Alignment:
Q  8 cccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctt 107  Q
    |||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||    
T  2350672 cccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaatagtttcctt 2350771  T
Q  108 ttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagca 168  Q
    ||||||||||||||| |||||||| |||||||||||||||||||   | ||||||||||||    
T  2350772 ttatggtaataattcccttttatgatatgcttaaccagtaccccggagacaccggttagca 2350832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 32985366 - 32985193
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| || |||||||  |||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||  ||    
T  32985366 cggtgccctcggggcattggttaaggatataaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacag 32985267  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||| ||||  |||||||||||||||| ||||    
T  32985266 tttccttttatgataataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcagaaccc 32985193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 10 - 174
Target Start/End: Complemental strand, 26467288 - 26467124
Alignment:
Q  10 cggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctttt 109  Q
    |||||||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||||||||||||    
T  26467288 cggggcaccggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaatagtttcctttt 26467189  T
Q  110 atggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||| |||||||||||||  |||||||| ||||   |||||||||||||| |||||    
T  26467188 atggtaataattcccttttatggtatgtctaaccagtgccccggaggcaccggttagcatgaccc 26467124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 2580983 - 2581138
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | ||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || |||| || ||||||||||||||||||    
T  2580983 ggttaatgatataaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaataatttccttttatggtaata 2581082  T
Q  119 attctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||| ||||||||||||||||||||| ||||||  | |||||||||||||||||||    
T  2581083 attcccttttatggtatgcttaaccaataccccgggagcaccggttagcaggaccc 2581138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 12 - 170
Target Start/End: Complemental strand, 3026171 - 3026013
Alignment:
Q  12 gggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttat 111  Q
    |||||| |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||  ||||| |||||||    
T  3026171 gggcactggttaagggtatgaaaaatgaaattatacagtagttaatgcattgaaattgtataattaatttataataatgtcaaaaacagttttcttttat 3026072  T
Q  112 ggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcagg 170  Q
     ||||||||||||||||||||||||||||| ||||  ||| ||||||||||||||||||    
T  3026071 cgtaataattctcttttatggtatgcttaatcagtgtcccgagggcaccggttagcagg 3026013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 23402159 - 23402324
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||| |||||| | |||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||| || ||||  ||||||||||    
T  23402159 ccggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgaaattaatttataataaagtcaaaaacagtttccttt 23402258  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||  |||||||||||||||||||| || ||||   ||||||||||||||||||||    
T  23402259 tatggtaataattaccttttatggtatgcttaacccgtgccccggaggcaccggttagcaggaccc 23402324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 18276782 - 18276612
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    |||| |||||| |||||| | ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| || ||||  ||||||||    
T  18276782 cccctgggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaatttgtgtaattaatttataataaagtcaaaaacagtttcct 18276683  T
Q  107 tttatggtaataattctcttttatgg---tatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||  |||||||||   |||||||||||||| ||||  |||||||||||||||||||||    
T  18276682 tttatggtaataatttccttttatggtattatgcttaaccagtgcccctggggcaccggttagcaggaccc 18276612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 12525740 - 12525905
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    |||||| || |||||| ||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||| |||   |||||| |||    
T  12525740 ccggggtactggttaagggtatgaaaaaggaaattatatagtagttaatacattgaaaatgtgtaattaatttataataatgtcaaacacagtttcattt 12525839  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||| |||||||| |||||||||| ||| ||||| ||  |||||||||||||||||    
T  12525840 tatggtaataattcccttttatgatatgcttaactagtgccccagggataccggttagcaggaccc 12525905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 28 - 175
Target Start/End: Complemental strand, 12145263 - 12145116
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  |||||||||||||| ||||||||  ||||    
T  12145263 tatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgataataatttccttt 12145164  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    ||| ||||||||||||||| | ||   |||||||||||||||||||||    
T  12145163 tatagtatgcttaaccagtgctccggaggcaccggttagcaggaccca 12145116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 35043904 - 35044077
Alignment:
Q  2 ggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagt 101  Q
    ||||||| |||| ||| |||||| | ||||||||| ||||||||||||||||||||  |||||||||||||| |||||||||||||| || ||||  |||    
T  35043904 ggtgtccacgggacactggttaaggatatgaaaaaagaaattatatagtagttaattcattgaaattgtgta-ttaatttataataaagtcaaaaacagt 35044002  T
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaa 177  Q
    || |||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||| || ||||||||    
T  35044003 tttcttttatggtaataattctcttttatggtatgcttaaccagtgcccc-ggggcaccggttaacatgacccaaa 35044077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 28 - 177
Target Start/End: Complemental strand, 1391324 - 1391175
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||  ||||| |||||||| ||||||||| ||||    
T  1391324 tatgaaaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaaacagttttcttttatgataataattcccttt 1391225  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaa 177  Q
    |||||||||||||||||||   ||| |  |||||||||||||||||||||    
T  1391224 tatggtatgcttaaccagtgttccaggaacaccggttagcaggacccaaa 1391175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 34852003 - 34851877
Alignment:
Q  20 gttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataa 119  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||| || ||||||||||| |||||||    
T  34852003 gttaaagatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattgatttataataaagtcaaaaataatttccttttatagtaataa 34851904  T
Q  120 ttctcttttatggtatgcttaaccagt 146  Q
    |||||||||||  ||||||||||||||    
T  34851903 ttctcttttataatatgcttaaccagt 34851877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 7851332 - 7851191
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| |||| |||||| |||||| | |||||||||| ||||||||||||| |||||| ||| ||||||||||||||||||||||||| || ||||  ||    
T  7851332 cggtgcccccagggcactggttaaggatatgaaaaagaaaattatatagtaattaatgcattaaaattgtgtaattaatttataataaagtcaaaaacag 7851233  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaac 142  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  7851232 tttccttttatggtaataattcccttttatggtatgcttaac 7851191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 28 - 174
Target Start/End: Complemental strand, 13417108 - 13416960
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataat---gtgaaaattagtttccttttatggtaataattctc 124  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||   || ||||  ||||| ||||||||||||||||||||    
T  13417108 tatgaaaaaggaaattatatattagttaatgtattgaaattgtgtaattaatttataataataaagtcaaaaacagttttcttttatggtaataattctc 13417009  T
Q  125 ttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||  |||||||||||||| |||  | ||||||||||||| ||||||    
T  13417008 ttttataatatgcttaaccagtgcccgga-ggcaccggttagctggaccc 13416960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 25165568 - 25165413
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||  ||||| |||||||| |||||    
T  25165568 ggttaaggatatgaaaaaagaaattatatagtagttaatatattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatgataata 25165469  T
Q  119 attctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||| | |||||||||||| | |||   | |||||||||||||||||||    
T  25165468 attctcttttacgatatgcttaaccaatgccctgggagcaccggttagcaggaccc 25165413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 29451277 - 29451146
Alignment:
Q  12 gggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttat 111  Q
    |||||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| || |||   |||||||||||||    
T  29451277 gggcaccggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaaattataataaagtcaaacacagtttccttttat 29451178  T
Q  112 ggtaataattctcttttatggtatgcttaacc 143  Q
    | ||||||||| ||||||||||||||||||||    
T  29451177 gataataattcccttttatggtatgcttaacc 29451146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 11115267 - 11115120
Alignment:
Q  2 ggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagt 101  Q
    |||||||||| ||||| |||||| | ||| ||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||  | |||| ||||    
T  11115267 ggtgtccccgaggcactggttaaggatataaaaaaggaaattatataatagttaatacattgaaattgtgtaattaatttataataa--tcaaaaatagt 11115170  T
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtacccc 151  Q
    || |||||||||||||||||| |||||||| |||| ||||||||| ||||    
T  11115169 tttcttttatggtaataattcccttttatgatatgtttaaccagtgcccc 11115120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 28225249 - 28225406
Alignment:
Q  16 acgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggta 115  Q
    ||||||||| | ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| || ||||  | ||| |||||||||||    
T  28225249 acgggttaaggatatgaaaaaggaa-ttatatagtaattaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggta 28225347  T
Q  116 ataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||| |||||||||||| ||||| ||||  ||| | ||||| |||||| |||||||    
T  28225348 ataattcccttttatggtatccttaaacagtgacccgaaggcacaggttagtaggaccc 28225406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 174
Target Start/End: Complemental strand, 21878509 - 21878353
Alignment:
Q  12 gggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttat 111  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||| || ||||  |||||| ||||||    
T  21878509 gggcacgggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattatttaattaatttataataaagtcaaaaacagtttctttttat 21878410  T
Q  112 ggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||| ||      ||||| ||||||||| ||||| |  ||||||||||||||||||    
T  21878409 ggtaataattccct------gtatgtttaaccagtgccccaggaacaccggttagcaggaccc 21878353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 175
Target Start/End: Original strand, 31280362 - 31280502
Alignment:
Q  29 atgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctctttt 128  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||   |||||||||||| ||||||||||     |    
T  31280362 atgaaaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataataatgtcaaaaacggtttccttttatagtaataattc-----t 31280456  T
Q  129 atggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||||||||||||| ||| |||  | |||||||||||||||||||||    
T  31280457 atggtatgcttaacgagtgcccgga-ggcaccggttagcaggaccca 31280502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 30 - 143
Target Start/End: Original strand, 961051 - 961164
Alignment:
Q  30 tgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctctttta 129  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| || | ||  | |||||||||||| ||||||||||||||||    
T  961051 tgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaattgataataaagtcagaaacaatttccttttatgataataattctctttta 961150  T
Q  130 tggtatgcttaacc 143  Q
    ||||||||||||||    
T  961151 tggtatgcttaacc 961164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 23629743 - 23629607
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    ||||||||||| | |||| | |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||  | ||||||    
T  23629743 ccccggggcactgattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattgtgtaattactttataataaagtcaaaaacaatttcct 23629644  T
Q  107 tttatggtaataattctcttttatggtatgcttaacc 143  Q
    ||||||  ||||||| ||||||||| ||| |||||||    
T  23629643 tttatgacaataattttcttttatgttatacttaacc 23629607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 29978272 - 29978389
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||  ||||||||||| || ||||  |||||  ||||||||||||||||| ||||    
T  29978272 tatgaaaaaggaaattatatagtatttaatgtattgaaattatgtaatatatttataataaagtcaaaaacagtttaattttatggtaataattcccttt 29978371  T
Q  128 tatggtatgcttaaccag 145  Q
    |||| |||||||||||||    
T  29978372 tatgatatgcttaaccag 29978389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 1840407 - 1840275
Alignment:
Q  14 gcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatgg 113  Q
    |||| |||||| | ||| ||||| ||||||||||| || |||||||||| ||||||||||||||||||||||||| || ||||  |||||||||| ||||    
T  1840407 gcactggttaaggatataaaaaaagaaattatataataattaatgtattaaaattgtgtaattaatttataataaagttaaaaacagtttcctttcatgg 1840308  T
Q  114 taataattctcttttatggtatgcttaaccagt 146  Q
    ||||||||| |||||||| |||| |||||||||    
T  1840307 taataattcccttttatgatatgtttaaccagt 1840275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 20897961 - 20898075
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| |||| |||||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| || | ||  ||    
T  20897961 cggtgcccccagggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacag 20898060  T
Q  101 tttccttttatggta 115  Q
    |||||||||||||||    
T  20898061 tttccttttatggta 20898075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 34477717 - 34477609
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    |||| |||||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| || | ||  ||||||||    
T  34477717 cccccgggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttcct 34477618  T
Q  107 tttatggta 115  Q
    |||||||||    
T  34477617 tttatggta 34477609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 32 - 143
Target Start/End: Original strand, 5323444 - 5323555
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    |||||||||||||||||||| |||| | ||| ||||| ||||||||||||||||||| || ||||  | |||||||||||||||||||||| ||||||||    
T  5323444 aaaaaggaaattatatagtaattaaagcattaaaattatgtaattaatttataataaagtcaaaaacaatttccttttatggtaataattcccttttatg 5323543  T
Q  132 gtatgcttaacc 143  Q
    |||||| |||||    
T  5323544 gtatgcgtaacc 5323555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 152
Target Start/End: Original strand, 9661026 - 9661150
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||| ||||||| ||| ||||||||| ||||||||||| ||||||||||| ||||| || ||||  ||||||||||||||||||||||||  |||    
T  9661026 tatgaaaaaagaaattacataatagttaatgcattgaaattgtataattaatttaaaataaagttaaaagcagtttccttttatggtaataattccattt 9661125  T
Q  128 tatggtatgcttaaccagtacccca 152  Q
    |||  |||| |||| ||||||||||    
T  9661126 tataatatgtttaatcagtacccca 9661150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 34396700 - 34396596
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| |||| || ||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||    
T  34396700 cggtgcccccaggacacaggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacag 34396601  T
Q  101 tttcc 105  Q
    |||||    
T  34396600 tttcc 34396596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 13529477 - 13529554
Alignment:
Q  10 cggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 87  Q
    |||||||| |||||| | | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13529477 cggggcactggttaaggatgtgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataata 13529554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 22417304 - 22417356
Alignment:
Q  99 agtttccttttatggtaataattctcttttatggtatgcttaaccagtacccc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||| ||||    
T  22417304 agtttccttttatgctaataattctcttttatggtatgcttaatcagtgcccc 22417356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 187
Target Start/End: Original strand, 1127934 - 1128015
Alignment:
Q  106 ttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaataaatatagt 187  Q
    ||||||||||| |||| |||||| | ||||||||||||||| |||| |||||||||||||| | ||| |||| ||| |||||    
T  1127934 ttttatggtaagaattttctttttttgtatgcttaaccagtgccccgagggcaccggttagtaagactcaaaaaaaaatagt 1128015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 34706835 - 34706907
Alignment:
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||| ||||  ||||| | ||||||||||||||| ||||  ||||||||||||||| |||||    
T  34706835 ttccttttatggtaagaatttccttttttcgtatgcttaaccagtgccccgggggcaccggttagcaagaccc 34706907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 34494276 - 34494338
Alignment:
Q  112 ggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||||| | ||||||||||||| ||||||   ||||||||||||||| ||||    
T  34494276 ggtaataattctcttttgttgtatgcttaaccaataccccggaggcaccggttagcagaaccc 34494338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 3e-69; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 789703 - 789527
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||    
T  789703 cggtgcccccggggcacgggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacag 789604  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaa 177  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||  ||||||||||||| |||||||||    
T  789603 tttccttttatggtaataattcccttttatggtatgcttaaccagtagcccagaggcaccggttagcgggacccaaa 789527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 16536061 - 16536234
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||    
T  16536061 cggtgcccccggggcacggattaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacag 16536160  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| ||||  |||||||||||||||||||||    
T  16536161 tttccttttatggtaataattctattttatggtattcttaaccagtgccccgggggcaccggttagcaggaccc 16536234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 7 - 174
Target Start/End: Original strand, 7768957 - 7769124
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||    
T  7768957 ccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgttaaaaacagtttcct 7769056  T
Q  107 tttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||||||| || ||||||| || ||||  |||||||||||||||||||||    
T  7769057 tttatggtaataattctcttttatggcatacttaacccgtgccccgggggcaccggttagcaggaccc 7769124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 4268995 - 4268812
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| |||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||| ||||  ||    
T  4268995 cggtgcccccggggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaattatgtaattaatttataataatgtcaaaaacag 4268896  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaataaatat 184  Q
    |||| ||||||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||||||||||||||| | ||||||    
T  4268895 tttctttttatggtaataattcccttttatggtatgattaaccagtgccccgagggcaccggttagcaggacccataaaaatat 4268812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 4089155 - 4089328
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||| ||||||| | |||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||    
T  4089155 cggtgcccctggggcactgattaagggtatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacag 4089254  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||||||||||||    
T  4089255 tttccttttatggtaataattctcttttatggtatgtttaaccagtgccccaggggcaccagttagcaggaccc 4089328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 43944528 - 43944693
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  43944528 ccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttt 43944627  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||||||||||||| ||| |||||||||||||||||||  ||| |||||||||||||||| ||||||    
T  43944628 tatggtaataattcccttgtatggtatgcttaaccagt-gcccgagggcaccggttagcaagaccca 43944693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 18068052 - 18067879
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| |||| |||    
T  18068052 cggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttatcataatgtcaaaaatag 18067953  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||| ||||||||||||| |||||| || ||||  ||||||||||||||| |||||    
T  18067952 tttccttttatggtaataattcccttttatggtatgtttaacccgttccccgggggcaccggttagcaagaccc 18067879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 37987966 - 37988121
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||| ||||||    
T  37987966 ggttaagggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgttaaaaacagtttccttttattgtaata 37988065  T
Q  119 attctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||| ||||||||||||| | |||| |  ||||||||||| |||||||    
T  37988066 attctcttttatagtatgcttaaccaatcccccgaaagcaccggttagtaggaccc 37988121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 33 - 175
Target Start/End: Original strand, 6164138 - 6164280
Alignment:
Q  33 aaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatgg 132  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |  ||||  ||||||||||||||||||||||||||||||||||    
T  6164138 aaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagcaaaaaacagtttccttttatggtaataattctcttttatgg 6164237  T
Q  133 tatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    ||||||||||||||||||| ||| |||||||||||||||||||    
T  6164238 tatgcttaaccagtaccccgaggacaccggttagcaggaccca 6164280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 43202556 - 43202384
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| |||||||||||  ||||| |||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||| ||||  ||    
T  43202556 cggtgcccccggggcactagttaagggtatgaaaaaggaaattatatagtaattaatgcattaaaattgtgtaattaatttataataatgtcaaaaacag 43202457  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||  |||  |||||||||||||||||||||    
T  43202456 ttttcttttatggtaataattctcttttatggtaagcttaaccagt-gcccgggggcaccggttagcaggaccc 43202384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 29591203 - 29591375
Alignment:
Q  2 ggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagt 101  Q
    |||| ||||||||||| ||||||   |||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||| || ||||  |||    
T  29591203 ggtgcccccggggcactggttaagaatatgaataaggaaattatatagtagttaatgcattgaaattgtgtacttaatttataataaagtcaaaaacagt 29591302  T
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||||||||  ||||||||||||||||||| ||| ||||  |||||||||||||||||||||    
T  29591303 ttccttttatggtaataattaccttttatggtatgcttaactagtgccccgggggcaccggttagcaggaccc 29591375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 15186256 - 15186424
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||  ||    
T  15186256 cggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatccattgaaattgtgtaattaatttataataatgtcaaaaacag 15186355  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    ||||||||||||||||||||||  ||||||||      |||||||| ||||  |||||||||||| |||||||||    
T  15186356 tttccttttatggtaataattccattttatgg------taaccagtgccccgggggcaccggttaacaggaccca 15186424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 36395130 - 36395285
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||||| |||||||| |||||    
T  36395130 ggttaaaaatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaagcagttttcttttatgataata 36395229  T
Q  119 attctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||| ||||||||||||||||||||||| |||   ||||||| |||||||||||||    
T  36395230 attcccttttatggtatgcttaaccagtgccctgggggcaccagttagcaggaccc 36395285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 28 - 174
Target Start/End: Original strand, 50619126 - 50619271
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    |||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| || ||||  |||||||||||||||||||||||| ||||    
T  50619126 tatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtacttaatttataataaagtaaaaaacagtttccttttatggtaataattcccttt 50619225  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||  |||| |||||||||||||| ||||||    
T  50619226 tatggtatgcttaaccagt-gcccaggggcaccggttagcgggaccc 50619271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 54897321 - 54897495
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| | ||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||  |     
T  54897321 cggtgcccccggggcactggttaaggatatgagaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaaacaa 54897420  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||  |||   |||||||||||||||||||||    
T  54897421 tttccttttatggtaataatttccttttatggtatgtttaaccagtgtcccggaggcaccggttagcaggaccca 54897495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 32202653 - 32202481
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||    
T  32202653 cggtgtccccggggcacgggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacag 32202554  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||| ||||||||| |||||||| ||||||||| || |  ||||  |||||| |||| ||||||||    
T  32202553 tttccttttatgataataattc-cttttatgatatgcttaatcaatgtcccagaggcaccagttaacaggaccc 32202481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 12356275 - 12356431
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | ||||||||||||||||||||||||||||||  ||||||||| | ||||||||||||||||| || ||||  |||||||||||||| |||||    
T  12356275 ggttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattatataattaatttataataaagtcaaaaacagtttccttttatgataata 12356374  T
Q  119 attctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    ||||||||||||||||||||||||||||   ||  ||||||||||||||||||||||    
T  12356375 attctcttttatggtatgcttaaccagtgttccgggggcaccggttagcaggaccca 12356431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 10 - 149
Target Start/End: Complemental strand, 24679806 - 24679668
Alignment:
Q  10 cggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctttt 109  Q
    |||||||| |||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||  | ||||| |||    
T  24679806 cggggcactggttaaggatatgaaaaaagaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagttaaaaacaatttcc-ttt 24679708  T
Q  110 atggtaataattctcttttatggtatgcttaaccagtacc 149  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  24679707 atggtaataattctcttttatggtatgcttaatcagtacc 24679668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 32217059 - 32217230
Alignment:
Q  2 ggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagt 101  Q
    |||| ||||||||||| |||||| | ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  |||    
T  32217059 ggtgcccccggggcactggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagt 32217158  T
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||  ||||||| ||||||||| |||||||||||||||||||| || ||||   ||||||||||| ||||||||    
T  32217159 tt-tttttatgataataattcccttttatggtatgcttaacctgtgccccggaggcaccggttaacaggaccc 32217230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 42898908 - 42898774
Alignment:
Q  12 gggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctttta- 110  Q
    |||||| |||||| | ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||||||| |||||     
T  42898908 gggcactggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaatagtttctttttat 42898809  T
Q  111 -tggtaataattctcttttatggtatgcttaacca 144  Q
     ||||||||||||||||||||||||||||||||||    
T  42898808 gtggtaataattctcttttatggtatgcttaacca 42898774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 2 - 172
Target Start/End: Complemental strand, 54656048 - 54655879
Alignment:
Q  2 ggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagt 101  Q
    ||||| || ||||||| |||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||  | |    
T  54656048 ggtgttccgggggcactggttaaggatataaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaat 54655949  T
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggac 172  Q
    || |||||| | |||||||||||| ||||| ||||||||||||||  |||  |||||||||||||||||||    
T  54655948 tttcttttaggataataattctctcttatgatatgcttaaccagtgtccc-ggggcaccggttagcaggac 54655879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 33108837 - 33108673
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||| |||||| | ||||||||||||||||||||| ||||||||| |||||||| || ||||||||| ||||||| || ||||  ||||||||||    
T  33108837 ccggggcactggttaa-gatatgaaaaaggaaattatataatagttaatgcattgaaatagtataattaattgataataaagtcaaaaacagtttccttt 33108739  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||  ||||||||||||||||||| || ||||   ||||||||||||||||||||    
T  33108738 tatggtaataattcctttttatggtatgcttaacccgtgccccggaggcaccggttagcaggaccc 33108673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 142
Target Start/End: Original strand, 4220217 - 4220348
Alignment:
Q  10 cggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctttt 109  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||  | ||| |||||    
T  4220217 cggggtacgggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttctttt 4220316  T
Q  110 atggtaataattctcttttatggtatgcttaac 142  Q
    || |||||||||| |||||||||||||||||||    
T  4220317 at-gtaataattcccttttatggtatgcttaac 4220348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 19503260 - 19503101
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | ||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||| || ||||  ||||||||||||| ||||||    
T  19503260 ggttaaggatatgaaaaaggaaattatatactagttaatacattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttattgtaata 19503161  T
Q  119 attctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaat 178  Q
    |||| ||||||||||||||||||| ||||||    ||||| |||||||| |||| |||||    
T  19503160 attcccttttatggtatgcttaactagtaccttgggggcatcggttagcgggactcaaat 19503101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 28 - 175
Target Start/End: Complemental strand, 30154309 - 30154162
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  | ||||  | ||||||| |||| ||||||||||||||    
T  30154309 tatgaaaaaggaaattatatagtagttaatgtattgaaattatgtaattaatttataataaaatcaaaaacaatttccttatatgataataattctcttt 30154210  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||||| |||||||||||| |||| |   || ||||||||||||||||    
T  30154209 tatggtgtgcttaaccagtgccccgaaaacatcggttagcaggaccca 30154162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 50603258 - 50603414
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctttt-atggtaat 117  Q
    |||||| ||| || ||||||||||| |||| || |||||| |||||||||||||||||||||||||||||||| ||||  |||||  |||| ||| ||||    
T  50603258 ggttaagggtgtggaaaaggaaattgtataataattaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagttttttttttatgataat 50603357  T
Q  118 aattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||||||||||||||| ||  |||| |||||||||||||    
T  50603358 aattctcttttatggtatgcttaaccagtaccccgagaacaccagttagcaggaccc 50603414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 9 - 141
Target Start/End: Complemental strand, 3783666 - 3783534
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||| |||||||  ||||||||| ||||||||||||||||||||| ||| ||||||| ||||||||| ||||||| || ||||  ||||| ||||    
T  3783666 ccggggcaccggttaaacatatgaaaaatgaaattatatagtagttaatgcattaaaattgtttaattaattgataataaagtcaaaaacagttttcttt 3783567  T
Q  109 tatggtaataattctcttttatggtatgcttaa 141  Q
    |||||||||||||| ||||||||||||||||||    
T  3783566 tatggtaataattcccttttatggtatgcttaa 3783534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 175
Target Start/End: Complemental strand, 54945941 - 54945779
Alignment:
Q  11 ggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctttta 110  Q
    ||||||| |||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||  | |||| |||||    
T  54945941 ggggcactggttaaggatatgaaaaaggaaattatatagcagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaatttcgtttta 54945842  T
Q  111 tggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||| |||||||  ||||||||||| |||||||||| | ||  |  |||||||||||||||||||    
T  54945841 tggt-ataattcctttttatggtatacttaaccagtgctcc-ggaacaccggttagcaggaccca 54945779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 39843938 - 39844060
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | ||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||| || ||||  ||||||||||||||||||||    
T  39843938 ggttaaggatatgaaaaatgaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagtttccttttatggtaata 39844037  T
Q  119 attctcttttatggtatgcttaa 141  Q
    ||||  ||||| |||||||||||    
T  39844038 attcctttttagggtatgcttaa 39844060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 46148979 - 46149097
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||||||||||||||| || |||||  ||||||||||||||||||||||||||||| || ||||  | |||| ||||||||||||||||||||||    
T  46148979 tatgaaaaaggaaattatataataattaatacattgaaattgtgtaattaatttataataaagtcaaaaacaatttctttttatggtaataattctcttt 46149078  T
Q  128 tatggtatgcttaaccagt 146  Q
    ||||||||| |||||||||    
T  46149079 tatggtatgtttaaccagt 46149097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 47232045 - 47231895
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| |||||| |||| |||||| | | ||||||||||||||||||| ||||||||| ||||||||  ||||||||||| ||||||| || ||||  ||    
T  47232045 cggtgcccccggagcactggttaaggatgtgaaaaaggaaattatataatagttaatgcattgaaataatgtaattaattgataataaagtcaaaaacag 47231946  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtacccc 151  Q
    |||||||||||| ||||||||| ||||||||||||| ||||||| ||||||    
T  47231945 tttccttttatgataataattcccttttatggtatgtttaaccaatacccc 47231895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 173
Target Start/End: Original strand, 28755644 - 28755803
Alignment:
Q  12 gggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttat 111  Q
    |||||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| || | ||  |||||||||||||    
T  28755644 gggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagttagaaacagtttccttttat 28755743  T
Q  112 ggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacc 173  Q
    | ||||| ||| ||||||| ||||||||||||  | |||| | | |||||||||||||||||    
T  28755744 gataatacttc-cttttatagtatgcttaacccatgccccga-gacaccggttagcaggacc 28755803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 55882697 - 55882868
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||||| |||||||||  ||||| | |||||||||  ||||||||||||| |||||| ||||||||||||||||||||||||||||| || ||||  ||    
T  55882697 cggtgtctccggggcactcgttaaggatatgaaaaaa-aaattatatagtaattaatgcattgaaattgtgtaattaatttataataaagtcaaaaacag 55882795  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||| |||||||||||| ||||| |||||||||||| ||||||| || || |  ||||||||||||| |||||||    
T  55882796 ttttcttttatggtaa-aattcacttttatggtatacttaacccgtgcctcgggggcaccggttagtaggaccc 55882868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 30387270 - 30387158
Alignment:
Q  38 gaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatggtatgc 137  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||||||||||||||||||||||||  ||||||| |||||    
T  30387270 gaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcctttttatgatatgc 30387171  T
Q  138 ttaaccagtaccc 150  Q
    |||| || |||||    
T  30387170 ttaatcaataccc 30387158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 175
Target Start/End: Complemental strand, 39877371 - 39877246
Alignment:
Q  52 gttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatgg--tatgcttaaccagtacc 149  Q
    ||||||||||||||||||||||||||||||||||||| || ||||  |||||| |||||| ||||||||||||||||||||  |||||||||||||| ||    
T  39877371 gttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttcattttatagtaataattctcttttatggtatatgcttaaccagtgcc 39877272  T
Q  150 ccaagggcaccggttagcaggaccca 175  Q
    ||   ||||| |||||||||||||||    
T  39877271 ccggaggcacgggttagcaggaccca 39877246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 53656024 - 53655906
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || |||  ||||||||||||||||   |||    
T  53656024 tatgaaaaaagaaattatataatagttaatgtattgaaattgtgtaattaatttataataaagttaaaaataattttattttatggtaataatttcattt 53655925  T
Q  128 tatggtatgcttaaccagt 146  Q
    |||||||||||||| ||||    
T  53655924 tatggtatgcttaatcagt 53655906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 143
Target Start/End: Complemental strand, 52533931 - 52533816
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||||||||||||||||||||||||| | ||||||||  ||||||||| ||||||| ||  |||  |||||||||||||||||||||||| ||||    
T  52533931 tatgaaaaaggaaattatatagtagttaatgcactgaaattgaataattaattgataataaagtcgaaaacagtttccttttatggtaataattcccttt 52533832  T
Q  128 tatggtatgcttaacc 143  Q
    ||||||||| ||||||    
T  52533831 tatggtatgtttaacc 52533816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 16820912 - 16821038
Alignment:
Q  48 agtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatggtatgcttaaccagta 147  Q
    |||| |||||| ||||||||| ||||||||| ||||||||| || | |   |||||||||||||||||||||||  |||||||||||||||||||||||     
T  16820912 agtaattaatgcattgaaattctgtaattaacttataataaagtcatacgcagtttccttttatggtaataatttccttttatggtatgcttaaccagtg 16821011  T
Q  148 ccccaagggcaccggttagcaggaccc 174  Q
    ||||  |||||||||||||||||||||    
T  16821012 ccccgggggcaccggttagcaggaccc 16821038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 8 - 175
Target Start/End: Complemental strand, 5091776 - 5091611
Alignment:
Q  8 cccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctt 107  Q
    |||||||||| ||||||   |||||||||  |||||||||| || ||||| |||| ||||||||||||||||||||||||| || | ||  |||||||||    
T  5091776 cccggggcactggttaagaatatgaaaaataaaattatataataattaatatattaaaattgtgtaattaatttataataaagtcataaacagtttcctt 5091677  T
Q  108 ttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||| |||||||||| ||||||| |||||||||||||||   ||  | ||||||||||||||||||||    
T  5091676 ttatagtaataattcccttttat-gtatgcttaaccagt-gtccgggagcaccggttagcaggaccca 5091611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 31680618 - 31680494
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| |||||||||||| || ||| ||| ||||||||| ||||||||||| ||||||||||||||||| || ||||  | ||||||||||||||||||    
T  31680618 ggttaagggtatgaaaaagaaagttacataatagttaatgcattgaaattgtataattaatttataataaagtcaaaaacaatttccttttatggtaata 31680519  T
Q  119 attctcttttatggtatgcttaacc 143  Q
    ||||  ||||||| |||| ||||||    
T  31680518 attcatttttatgatatgtttaacc 31680494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 49915199 - 49915301
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    |||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||| || ||||  |||||||||||||  ||||||||  ||||    
T  49915199 tatgaaaaagaaatttatatagtaattaatgtattgaaattgtgtaattaatttataataaagtaaaaaacagtttccttttataataataatttccttt 49915298  T
Q  128 tat 130  Q
    |||    
T  49915299 tat 49915301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 31517217 - 31517324
Alignment:
Q  40 aattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagt-ttccttttatggtaataattctcttttatggtatgct 138  Q
    ||||||||| ||||||||| |||||||| |||||||||||| ||||||| || |||| || | ||  ||||||||||||||||||||| |||||||||||    
T  31517217 aattatataatagttaatgcattgaaatagtgtaattaattgataataaagtcaaaaataatgttttttttatggtaataattctcttatatggtatgct 31517316  T
Q  139 taaccagt 146  Q
    ||||||||    
T  31517317 taaccagt 31517324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 54054561 - 54054675
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||| ||||||| |||||| | ||||||||| ||||||||||| ||||||||| |||||||| |||||||||||| ||||||| || ||||  |     
T  54054561 cggtgccccgggggcaccggttaaggatatgaaaaaagaaattatataatagttaatgcattgaaatagtgtaattaattgataataaagtcaaaaacaa 54054660  T
Q  101 tttccttttatggta 115  Q
    |||||||||||||||    
T  54054661 tttccttttatggta 54054675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 42815140 - 42815237
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttc-cttttatggta 115  Q
    |||||| | ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| || ||||  |||||| |||||||||||    
T  42815140 ggttaaggatatgaaaaaggaaattatatcatagttaatgtattgaaattatgtaattaatttataataaagtcaaaaacagtttctcttttatggta 42815237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 46688345 - 46688264
Alignment:
Q  34 aaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggta 115  Q
    |||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| || ||||  |||||||||||||||||    
T  46688345 aaagaaaattatacagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaagcagtttccttttatggta 46688264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 41265510 - 41265616
Alignment:
Q  39 aaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatggtatgct 138  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| ||  | ||||  ||||| ||||||| ||||||||| |||||| ||||||| |    
T  41265510 aaattatatagtagttaatgcagtgaaattgtgtaattaatttataa-aaaatcaaaaacagttttcttttattgtaataattttcttttttggtatgtt 41265608  T
Q  139 taaccagt 146  Q
    ||||||||    
T  41265609 taaccagt 41265616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 149
Target Start/End: Original strand, 53268764 - 53268880
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||||||||||||| || || ||||  | ||| |||||||  |||||||| |||||| ||    
T  53268764 aaaaaagaaattatatattagttaatgcattaaaattgtgtaattaatttataa-aaagtcaaaaacaattttcttttataataataattttcttttttg 53268862  T
Q  132 gtatgcttaaccagtacc 149  Q
    ||||||||||||| ||||    
T  53268863 gtatgcttaaccaatacc 53268880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 50167604 - 50167685
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttata 84  Q
    |||||| | |||||||| |||||||| |||||||||| ||||||||  |||||||||| |||||||||||||||||||||||||    
T  50167604 cggtgttctcggggcactggttaaagatatgaaaaagaaaattata--gtagttaatgcattgaaattgtgtaattaatttata 50167685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 174
Target Start/End: Complemental strand, 53004063 - 53003956
Alignment:
Q  67 ttgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttag 166  Q
    ||||||||||||| |||||||| || |||| || ||||||||||   |||||||||||||||||| ||||||||| ||||  |||  || ||||||||||    
T  53004063 ttgtgtaattaatgtataataaagtcaaaaataatttccttttaaaataataattctcttttatgatatgcttaatcagtgtccccgggacaccggttag 53003964  T
Q  167 caggaccc 174  Q
    ||||||||    
T  53003963 caggaccc 53003956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 8133782 - 8133862
Alignment:
Q  63 gaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatggtatgcttaacca 144  Q
    |||| ||||||||||||||||||||| || |||| |||||| ||||||||||||||||| |||||||| ||||| |||||||    
T  8133782 gaaaatgtgtaattaatttataataaagtcaaaaatagttttcttttatggtaataattatcttttat-gtatgtttaacca 8133862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 52697083 - 52697205
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | |||||||||  |||||||||||||||||||  ||| ||||| | |||| |||||||||||| || |||| || ||| | ||||| ||||||    
T  52697083 ggttaaggatatgaaaaacaaaattatatagtagttaatacattaaaattatataat-aatttataataaagtcaaaaataattttcctttattgtaata 52697181  T
Q  119 attctcttttatggtatgcttaac 142  Q
    ||||||||||||| |||| |||||    
T  52697182 attctcttttatgatatgtttaac 52697205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 1432703 - 1432554
Alignment:
Q  13 ggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatg 112  Q
    ||||| |||||| | ||||||||||||||||||||| ||||||||      | |||||| ||||||||||||||||  | ||||  |||||| |||||||    
T  1432703 ggcactggttaaggatatgaaaaaggaaattatataatagttaat------acattgtg-aattaatttataataaaataaaaaacagtttc-ttttatg 1432612  T
Q  113 gtaataa--ttctcttttatggtatgcttaaccagtaccccaagggcaccggttagca 168  Q
     ||||||  |||||||||||  ||||||||||||||||| ||   |||||||||||||    
T  1432611 ataataaaattctcttttataatatgcttaaccagtacctcagaagcaccggttagca 1432554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 37402830 - 37402759
Alignment:
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||| ||||  ||||| || |||||||||||||| |||| |||||||||||||||| |||||    
T  37402830 ttccttttatggtaagaatttccttttttg-tatgcttaaccagtgccccgagggcaccggttagcatgaccc 37402759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 17344800 - 17344687
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    ||||| ||||||||||| ||||||||| ||| ||||| | ||||||| |||||| ||| | ||||  |||||| |||||||||||||| | |||||| |     
T  17344800 aaaaatgaaattatataatagttaatgcatttaaattatataattaaattataaaaat-ttaaaaaaagtttctttttatggtaataactttcttttctt 17344702  T
Q  132 gtatgcttaaccagt 146  Q
    |||| ||||| ||||    
T  17344701 gtatccttaaacagt 17344687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 54054665 - 54054715
Alignment:
Q  124 cttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||||||||||| ||||  ||||||||||| |||||||||    
T  54054665 cttttatggtatgcttaaccagtgccccgggggcaccggttggcaggaccc 54054715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 8749838 - 8749796
Alignment:
Q  132 gtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||| || ||||||||||||||||||||| |||||    
T  8749838 gtatgcttaacccgtgccccaagggcaccggttagcatgaccc 8749796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 28119978 - 28119906
Alignment:
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||| ||||  ||||| | ||||||||||||||| ||||   | |||||||||||| |||||    
T  28119978 ttccttttatggtaagaatttcctttttttgtatgcttaaccagtgccccggagacaccggttagcatgaccc 28119906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 130; Significance: 2e-67; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 39074432 - 39074604
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||    
T  39074432 cggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaa-cag 39074530  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  39074531 tttccttttatggtaataattcccttttatggtatgcttaaccagtgccccaggggcaccggttagcaggaccc 39074604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 52520694 - 52520867
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||    
T  52520694 cggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacag 52520793  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  52520794 tttccttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 52520867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 43786892 - 43787057
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||  ||||||||||    
T  43786892 ccggggcactggttaatggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatatcaaaaacagtttccttt 43786991  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||| |||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  43786992 tatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 43787057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 272233 - 272407
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| |||    
T  272233 cggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaatag 272332  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||||||||||||||||||||| |||||||||||||||||| | || ||||  ||||||||||||||||||||||    
T  272333 tttccttttatggtaataattcccttttatggtatgcttaatcggtgccccgggggcaccggttagcaggaccca 272407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 4168204 - 4168369
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    |||||| || |||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||  ||||| ||||    
T  4168204 ccggggaactggttaaggatataaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttt 4168303  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  4168304 tatggtaataattctcttttatggtatgcttaacccgtaccccgggggcaccggttagcaggaccc 4168369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 49893344 - 49893518
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| | ||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||| || ||||  ||    
T  49893344 cggtgcccccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatctataataaagtcaaaaacag 49893443  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||||  |||||||||||||| |||||||    
T  49893444 tttccttttatggtaataattcccttttatggtatgcttaatcagtgccccgggggcaccggttagccggaccca 49893518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 46352647 - 46352821
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||| || | ||  ||    
T  46352647 cggtgcccccggggcactggttaaggatatgaaaaaggaaattatacagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacag 46352746  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||||||||||||||||||||| |||||||||||||||||||| || ||||   |||||||||||||||||||||    
T  46352747 tttccttttatggtaataattcccttttatggtatgcttaacccgtgccccggaggcaccggttagcaggaccca 46352821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 7 - 144
Target Start/End: Complemental strand, 53489991 - 53489854
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||  ||||||||    
T  53489991 ccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttataataatgtcaaaaacagtttcct 53489892  T
Q  107 tttatggtaataattctcttttatggtatgcttaacca 144  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  53489891 tttatgataataattctattttatggtatgcttaacca 53489854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 32 - 177
Target Start/End: Complemental strand, 10617426 - 10617281
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || ||||  | |||||||||||||||||||||| ||||||||    
T  10617426 aaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttataataaagtcaaaaacaatttccttttatggtaataattcccttttatg 10617327  T
Q  132 gtatgcttaaccagtaccccaagggcaccggttagcaggacccaaa 177  Q
    |||||||||||| || ||||  ||||||||||||||||||||||||    
T  10617326 gtatgcttaacccgtgccccgggggcaccggttagcaggacccaaa 10617281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 20924013 - 20924150
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| | ||||  ||||||||||    
T  20924013 ccggggcactggttaagggtatgaaaaaggaaattatatagtagttaattcattgaaattgtgtaattaatttataataatatcaaaaacagtttccttt 20924112  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagt 146  Q
    || |||||||||||||||||||||||| ||||||||||    
T  20924113 taaggtaataattctcttttatggtatacttaaccagt 20924150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 48725284 - 48725457
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||| ||||||| |||||| | |||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||| || ||||  ||    
T  48725284 cggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaattgataataaagtcaaaaacag 48725383  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||  |  ||| ||||||||||||||    
T  48725384 tttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggaccacgggttagcaggaccc 48725457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 2938195 - 2938040
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||||| ||| |||||| |||||||||||||||||||| | ||||||||||| ||||||||||||||| || ||||  | |||| |||||||||||||    
T  2938195 ggttaaagatataaaaaagaaaattatatagtagttaatgcactgaaattgtgtgattaatttataataaagtcaaaaacaatttcattttatggtaata 2938096  T
Q  119 attctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  2938095 attcacttttatggtatgcttaacgagtaccccgagggcaccggttagcaggaccc 2938040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 28 - 174
Target Start/End: Original strand, 858629 - 858775
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| || ||||  |||||||||||||||||||||||  ||||    
T  858629 tatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttccttttatggtaataatttccttt 858728  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||| || ||||  |||||||||||||| ||||||    
T  858729 tatggtatgcttaacccgtgccccgggggcaccggttagccggaccc 858775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 40362745 - 40362580
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||| | |||| | ||||||||| ||||||||||||||||||||| ||| ||||||||||||||||| ||||||| || ||||  ||||| ||||    
T  40362745 ccggggcactgattaaggatatgaaaaaagaaattatatagtagttaatgcattaaaattgtgtaattaattgataataaagtcaaaaacagttttcttt 40362646  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||| |||| ||||||||||||    
T  40362645 tatggtaataattctcttttatggtatgcttaaccagtgccccgggggtaccgattagcaggaccc 40362580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 2505380 - 2505507
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||| || |||| |||||||||||||||||||||    
T  2505380 ggttaaagatatgaaaaaggaaattatatagtagttagtgcattgaaattgtgtaattaattcataataaagtcaaaaatagtttccttttatggtaata 2505479  T
Q  119 attctcttttatggtatgcttaaccagt 146  Q
    |||| ||||||||||||| |||||||||    
T  2505480 attcccttttatggtatgtttaaccagt 2505507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 41554107 - 41553972
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    |||||| |||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||||||||    
T  41554107 ccccggtgcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttcct 41554008  T
Q  107 tttatggtaataattctcttttatggtatgcttaac 142  Q
    ||||||||||||||| | ||||||||||||||||||    
T  41554007 tttatggtaataattattttttatggtatgcttaac 41553972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 42964414 - 42964249
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||| |||||| | ||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||||| ||||    
T  42964414 ccggggcactggttaaggatatgaaaaatgaaattttatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttt 42964315  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||| |||||||||| |||||||| ||||||||||||||  | || || ||||||||||||||||||    
T  42964314 tatagtaataattcacttttatgatatgcttaaccagtgtctcagggacaccggttagcaggaccc 42964249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 32 - 174
Target Start/End: Complemental strand, 41993761 - 41993620
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    ||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||| || ||||  |||||||||||||  ||||||||||||||||||    
T  41993761 aaaaatgaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagttaaaaacagtttccttttat-ataataattctcttttatg 41993663  T
Q  132 gtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||| ||||||| || ||||||||||||||| ||||    
T  41993662 gtatgcttaactagtaccctaaaggcaccggttagcagaaccc 41993620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 21 - 146
Target Start/End: Original strand, 42548128 - 42548253
Alignment:
Q  21 ttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataat 120  Q
    |||||| ||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||| || |||| || |||| |||||||||||||||    
T  42548128 ttaaagatatgaaaaaagaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaataatttcattttatggtaataat 42548227  T
Q  121 tctcttttatggtatgcttaaccagt 146  Q
    || |||||||||||||||||||||||    
T  42548228 tcccttttatggtatgcttaaccagt 42548253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 30 - 174
Target Start/End: Complemental strand, 11308354 - 11308211
Alignment:
Q  30 tgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctctttta 129  Q
    ||||||||||||||||||| ||||||||| ||||||||  ||||||||||| |||||||  | |||| ||||||||||||||||||||||||| ||||||    
T  11308354 tgaaaaaggaaattatataatagttaatgcattgaaataatgtaattaattgataataaaatcaaaaatagtttccttttatggtaataattc-ctttta 11308256  T
Q  130 tggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||| | ||||| |||||||| ||||||||||||    
T  11308255 tggtatgcttaaccaatgccccaggggcaccgattagcaggaccc 11308211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 18014686 - 18014858
Alignment:
Q  2 ggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagt 101  Q
    |||| ||||||||||| | |||| | |||||||||| |||||||||||||||||||| |||||||||||||||||||  |||||||| || ||||  |||    
T  18014686 ggtgcccccggggcactgattaaggatatgaaaaagtaaattatatagtagttaatgcattgaaattgtgtaattaaactataataaagttaaaaacagt 18014785  T
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||| ||||||||  |||||||||||||||||| |||| ||||  ||||||| ||||||| |||||    
T  18014786 ttccttttatgataataatttccttttatggtatgcttaatcagtgccccgggggcaccagttagcaagaccc 18014858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 175
Target Start/End: Original strand, 6842676 - 6842806
Alignment:
Q  45 tatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatggtatgcttaacca 144  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| || ||||  |||||||||||||||||||||||| | |||||||||||||||||||    
T  6842676 tataatagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccatttatggtatgcttaacca 6842775  T
Q  145 gtaccccaagggcaccggttagcaggaccca 175  Q
    || ||||  ||||| ||||||||||||||||    
T  6842776 gtgccccgggggcagcggttagcaggaccca 6842806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 177
Target Start/End: Original strand, 7468430 - 7468598
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    ||||||| ||| |||||| |  |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||  ||||| ||    
T  7468430 ccccgggacactggttaaggaaatgaaaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaagcagttttct 7468529  T
Q  107 tttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaa 177  Q
    |||||| |||||| || |||||||||||||||||| |||| ||||  | ||||||||||||||||||||||    
T  7468530 tttatgataataa-tcccttttatggtatgcttaatcagtgcccc-ggagcaccggttagcaggacccaaa 7468598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 168
Target Start/End: Original strand, 22248926 - 22249066
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||||  ||||| |||||||||||||||||| ||||    
T  22248926 tatgaaaaaggaaattatatagtagttattgtattgaaattgtgtaattaattgataataaagtcaaaaacagttttcttttatggtaataattcccttt 22249025  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagca 168  Q
    ||| |||||||| |||| ||||| |   |||||||||||||    
T  22249026 tatagtatgcttgaccaataccctagaagcaccggttagca 22249066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 174
Target Start/End: Complemental strand, 43269899 - 43269739
Alignment:
Q  14 gcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatgg 113  Q
    |||| |||||| | |||||||| |||||||| ||||||||||||| ||||||||| |||||||||||||||||||  | |||   ||||||||||||| |    
T  43269899 gcactggttaaggatatgaaaagggaaattacatagtagttaatgcattgaaattatgtaattaatttataataaaatcaaacacagtttccttttatag 43269800  T
Q  114 taataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||| || ||||||||||||||||||||| ||||   ||||||||||||||||||||    
T  43269799 taataattatcctttatggtatgcttaaccagtgccccggaggcaccggttagcaggaccc 43269739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 2119444 - 2119577
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    |||||||| || ||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| || ||||  |     
T  2119444 cggtgtcctcgaggcactggttaaagatatgaaaaaggaaattatatagtagttaatgcattgaaattgagtaattaatttataataaagtcaaaaacaa 2119543  T
Q  101 tttccttttatggtaataattctcttttatggtatg 136  Q
    ||||||||||| |||||||||| |||||||||||||    
T  2119544 tttccttttat-gtaataattc-cttttatggtatg 2119577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 40 - 173
Target Start/End: Original strand, 33140937 - 33141070
Alignment:
Q  40 aattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatggtatgctt 139  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||  ||||| |||||||||||||||||| |||||||| |||||||    
T  33140937 aattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaagcagttttcttttatggtaataattcccttttatgatatgctt 33141036  T
Q  140 aaccagtaccccaagggcaccggttagcaggacc 173  Q
    || |||||||||    ||||||||||||| ||||    
T  33141037 aatcagtaccccggaagcaccggttagcaagacc 33141070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 169
Target Start/End: Original strand, 41304026 - 41304184
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||  |||||| | |||||||||||||||||||||||| |||||| |||||||||||  |||||||| ||||||| || ||||  ||||||||||    
T  41304026 ccggggcagtggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgt--aattaattgataataaagtcaaaaacagtttccttt 41304123  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcag 169  Q
    |||||||||||||  ||||||||||||||||||||| | ||||   | |||||||||||||    
T  41304124 tatggtaataatttccttttatggtatgcttaaccaatgccccggagacaccggttagcag 41304184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 28139340 - 28139467
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | ||||||||| ||||||| ||||||||||||| ||||||||||| ||||||||||||||||| || ||||  || |||||||||||||||||    
T  28139340 ggttaaggatatgaaaaaagaaattaaatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaagcagattccttttatggtaata 28139439  T
Q  119 attctcttttatggtatgcttaaccagt 146  Q
    |||| |||||||||||| ||||| ||||    
T  28139440 attcccttttatggtatacttaaacagt 28139467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 50395735 - 50395563
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||| ||| |||||  | |||||||||| |||||||| ||||||||||| || |||||||||||||||||| ||||||| || ||||  |     
T  50395735 cggtgcccccgggacactggttagggatatgaaaaagaaaattatacagtagttaatgcatagaaattgtgtaattaattgataataaagtcaaaa-caa 50395637  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||||||||||||||||||| |||| |||| |||||| ||   | ||||| ||||||||||||    
T  50395636 tttccttttatggtaataattctcttttatgatatgattaatcagtacaccggagacaccgattagcaggaccc 50395563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 49529436 - 49529294
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatata---gtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagttt 103  Q
    ||||||||||| | |||| | |||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||||||||||| || ||||  | |||    
T  49529436 ccccggggcactgattaaggatatgaaaaagaaaattatatactagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacatttt 49529337  T
Q  104 ccttttatggtaataattctcttttatggtatgcttaaccagt 146  Q
    ||||||||||||||||||  ||||||||||||| |||||||||    
T  49529336 ccttttatggtaataatttccttttatggtatgtttaaccagt 49529294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 50299098 - 50298970
Alignment:
Q  21 ttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataat 120  Q
    |||||| ||| |||| | |||||||||||||||||||| | ||||||||||||||||||||||||||| || ||||  |||||| ||||||| |||||||    
T  50299098 ttaaagatataaaaaggaaaattatatagtagttaatgcactgaaattgtgtaattaatttataataaagtcaaaaacagtttctttttatgataataat 50298999  T
Q  121 tctcttttatggtatgcttaaccagtacc 149  Q
    || || ||||||||| |||||||||||||    
T  50298998 tcactcttatggtatacttaaccagtacc 50298970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 50359353 - 50359214
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    ||||| ||||| |||||| | || ||||||  |||||||||||||||||||| |||||||||| ||||||||| |||||||| || ||||  ||||| ||    
T  50359353 ccccgtggcactggttaaggttaagaaaaaaaaaattatatagtagttaatgcattgaaattgggtaattaatatataataaagtcaaaaacagttttct 50359254  T
Q  107 tttatggtaataattctcttttatggtatgcttaaccagt 146  Q
    ||| ||||||||||| |||| |||||||||||||||||||    
T  50359253 tttgtggtaataattatcttctatggtatgcttaaccagt 50359214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 174
Target Start/End: Original strand, 13159937 - 13160082
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||| || ||||  ||||| || ||| ||||||||||   |||    
T  13159937 tatgaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaattgataataaagtcaaaaacagttttctattacggtaataatttctttt 13160036  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||| |||||  ||| | |||||||||||||| ||||    
T  13160037 tatggtatgcttaatcagta-tccacgagcaccggttagcagaaccc 13160082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 177
Target Start/End: Original strand, 52246603 - 52246771
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgt-gaaaattagtttcctt 107  Q
    ||||||||| |||||| | ||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||||||| ||  ||||  | |||  ||    
T  52246603 ccggggcactggttaaggatatgaaaaatgaaattatatagttgttaatgcattgaaattgtataattaatttataataaagtcaaaaacaatttttttt 52246702  T
Q  108 ttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaa 177  Q
    |||| |||||||||  ||||||||||||||||||| |||  ||| || ||||| ||||||||||||||||    
T  52246703 ttatagtaataatttccttttatggtatgcttaactagt-gcccgagagcaccagttagcaggacccaaa 52246771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 29241660 - 29241790
Alignment:
Q  11 ggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctttta 110  Q
    |||||||  ||||| | |||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||| || ||||  || ||| |||||    
T  29241660 ggggcaccagttaaggatatgaaaatggaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagattcttttta 29241759  T
Q  111 tggtaataattctcttttatggtatgcttaa 141  Q
    || |||||||||  |||||| ||||||||||    
T  29241760 tgataataattccgttttatagtatgcttaa 29241790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 32 - 173
Target Start/End: Original strand, 24488410 - 24488551
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    ||||||||||||||||| ||||||||| || ||||| |||||||||||| |||||||  | ||||  |||||| ||||||||||||||||||||||||||    
T  24488410 aaaaaggaaattatataatagttaatgcatggaaatagtgtaattaattgataataaaatcaaaaacagtttctttttatggtaataattctcttttatg 24488509  T
Q  132 gtatgcttaaccagtaccccaagggcaccggttagcaggacc 173  Q
     |||||| ||| ||| | ||  | |||||||||| |||||||    
T  24488510 atatgctgaactagtgctccgggagcaccggttaacaggacc 24488551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 32 - 143
Target Start/End: Original strand, 38852258 - 38852372
Alignment:
Q  32 aaaaaggaaattatatagtagt---taatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctctttt 128  Q
    ||||| ||||||||||||||||   ||||| ||||||||||||||||||||||||||||| || ||||  |||||  ||||||| ||||||||| |||||    
T  38852258 aaaaatgaaattatatagtagtaattaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttattttatgataataattcactttt 38852357  T
Q  129 atggtatgcttaacc 143  Q
    |||||||| ||||||    
T  38852358 atggtatgtttaacc 38852372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 31514831 - 31514952
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    |||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||  | ||||  | |||  |||||| |||||||||  ||||    
T  31514831 tatgaaaaataaaattatatagtagttaatgtattaaaattgtgtaattaatttataataaaatcaaaaacaattt-tttttatagtaataatttccttt 31514929  T
Q  128 tatggtatgcttaaccagtaccc 150  Q
    ||| |||| ||||||||||||||    
T  31514930 tatagtatacttaaccagtaccc 31514952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 146
Target Start/End: Original strand, 52552549 - 52552631
Alignment:
Q  63 gaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatggtatgcttaaccagt 146  Q
    |||||||||||||||||||||||||| || ||||  ||| || ||||||||||||||||||||||||||||||  |||||||||    
T  52552549 gaaattgtgtaattaatttataataaagtcaaaaacagtatc-ttttatggtaataattctcttttatggtatatttaaccagt 52552631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 239
Target Start/End: Complemental strand, 26818376 - 26818312
Alignment:
Q  175 aaataaatatagtcataacttgaaaaaacttgaaaatttgagtcatattcctacacctctgccct 239  Q
    ||||||||||||||||||| | |||||| ||||||||||||| ||||||||||||||| ||||||    
T  26818376 aaataaatatagtcataacataaaaaaatttgaaaatttgagccatattcctacacctttgccct 26818312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 2391630 - 2391688
Alignment:
Q  11 ggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattg 69  Q
    ||||||| |||||| | || |||||||||||||||||||||||||||| ||||||||||    
T  2391630 ggggcactggttaaggataagaaaaaggaaattatatagtagttaatgcattgaaattg 2391688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 2393391 - 2393449
Alignment:
Q  11 ggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattg 69  Q
    ||||||| |||||| | || |||||||||||||||||||||||||||| ||||||||||    
T  2393391 ggggcactggttaaggataagaaaaaggaaattatatagtagttaatgcattgaaattg 2393449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 21010041 - 21010124
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataa 119  Q
    |||||||||||||||||||||||||   ||||||||||| |||||||||||||| || || ||||  |||||| ||||||||||||||    
T  21010041 aaaaaggaaattatatagtagttaa--cattgaaattgtataattaatttataa-aaagtcaaaa-aagtttctttttatggtaataa 21010124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 25743854 - 25743968
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaa-ttgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttat 130  Q
    |||||||||||||||||||| ||| || ||| ||| |||||||||||||| |||| || || |||||  ||||| |||| | |||||||||  ||||| |    
T  25743854 aaaaaggaaattatatagtaattattgcattaaaaattgtgtaattaattcataaaaa-gtcaaaatc-gtttcattttttagtaataatttcctttttt 25743951  T
Q  131 ggtatgcttaaccagta 147  Q
    |||||||||||||||||    
T  25743952 ggtatgcttaaccagta 25743968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 26815246 - 26815178
Alignment:
Q  175 aaataaatatagtcataacttgaaaaaacttgaaaatttgagtcatattcctacacctctgccctatgc 243  Q
    ||||||||||| ||||||| | || |||||| |||||||||| |||||| ||||||||| |||||||||    
T  26815246 aaataaatataatcataacataaacaaacttaaaaatttgagccatatttctacacctcagccctatgc 26815178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 2362880 - 2362958
Alignment:
Q  36 aggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggta 115  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||| |||||||  | ||||  ||||| |||||||||||    
T  2362880 aggaaattatata-tagttaatgcattgaaatagtgtaattaattgataataaaatcaaaaacagttttcttttatggta 2362958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 87
Target Start/End: Original strand, 6842604 - 6842642
Alignment:
Q  49 gtagttaatgtattgaaattgtgtaattaatttataata 87  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  6842604 gtagttaatgcattgaaattgtgtaattaatttataata 6842642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 52718198 - 52718252
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgta 73  Q
    |||||| | ||||||||||||||||||||||||||||||  ||| ||||||||||    
T  52718198 ggttaaggatatgaaaaaggaaattatatagtagttaatacattaaaattgtgta 52718252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 146
Target Start/End: Original strand, 17752762 - 17752842
Alignment:
Q  64 aaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatggtatgcttaaccagt 146  Q
    |||||||||||||||||||||| ||||| | || |||||| ||||||   ||||||||| ||||| |||||||||||| ||||    
T  17752762 aaattgtgtaattaatttataa-aatgtcataa-tagttttcttttacaataataattcccttttttggtatgcttaatcagt 17752842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 146
Target Start/End: Original strand, 19054082 - 19054162
Alignment:
Q  64 aaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatggtatgcttaaccagt 146  Q
    |||||||||||||||||||||| ||||| | || |||||| ||||||   ||||||||| ||||| |||||||||||| ||||    
T  19054082 aaattgtgtaattaatttataa-aatgtcataa-tagttttcttttacaataataattcccttttttggtatgcttaatcagt 19054162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 26824150 - 26824092
Alignment:
Q  175 aaataaatatagtcataacttgaaaaaacttgaaaatttgagtcatattcctacacctc 233  Q
    ||||||||||||||||||| | ||| ||  | |||||||||| ||||||||||||||||    
T  26824150 aaataaatatagtcataacgtaaaataaaattaaaatttgagccatattcctacacctc 26824092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 53054841 - 53054959
Alignment:
Q  28 tatgaaaaaggaaattatatagtagtt---aatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctc 124  Q
    |||||| || |||||||||||||| ||   |||| ||||| ||||||||||| || |||||||| |  |||| ||||| | |||||   |||||||||||    
T  53054841 tatgaataatgaaattatatagtaattcttaatgcattgagattgtgtaatttatctataataaagccaaaaatagtt-cattttacaataataattctc 53054939  T
Q  125 ttttatggtatgcttaacca 144  Q
    |||||| ||||| |||||||    
T  53054940 ttttatagtatgtttaacca 53054959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 4e-65; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 51065921 - 51065748
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||||||||||| ||| |||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||  ||    
T  51065921 cggtgtccccgggacactggttaaggatatgaaaaagtaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacag 51065822  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  51065821 tttccttttatggtaataattcccttttatggtatgcttaaccagtgccccaggggcaccggttagcaggaccc 51065748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 42770163 - 42769990
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||  ||    
T  42770163 cggtgcccccggggcactggttaatggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatatcaaaaacag 42770064  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||  |||||||||||||||| ||||    
T  42770063 tttccttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcagaaccc 42769990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 18043183 - 18043348
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||||| ||||    
T  18043183 ccggggcactggttaagggtataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagttttcttt 18043282  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||| |||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  18043283 tatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 18043348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 47010014 - 47010179
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    |||| |||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||  ||||||||||    
T  47010014 ccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaattcaaaaacagtttccttt 47010113  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  47010114 tatggtaataattctcttttatggtatgcttaaccagtgctccaggggcaccggttagcaggaccc 47010179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 38162871 - 38163035
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||| |||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  38162871 ccggggcactggttaagggtatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttt 38162970  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacc 173  Q
    |||||||||||||| |||||||||||||||||||| || ||||  ||||||||||||||||||||    
T  38162971 tatggtaataattcccttttatggtatgcttaacccgtgccccgggggcaccggttagcaggacc 38163035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 30294554 - 30294380
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    |||||||||||| |||  |||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||    
T  30294554 cggtgtccccggagcattggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacag 30294455  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||| ||||||||||||||||| |||||||||||||||||||| || | ||  || |||||||||||||||||||    
T  30294454 tttctttttatggtaataattcccttttatggtatgcttaacctgtgctccggggacaccggttagcaggaccca 30294380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 8 - 174
Target Start/End: Complemental strand, 38702099 - 38701937
Alignment:
Q  8 cccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctt 107  Q
    |||||||||| |||||| |||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||| ||||  ||||| |||    
T  38702099 cccggggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagttttctt 38702000  T
Q  108 ttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||    |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  38701999 ttatggtaataattc----ttatggtatgcttaaccagtgccccgagggcaccggttagcaggaccc 38701937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 13961225 - 13961396
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| |||||||||||||||||| | ||| |||||  |||||||||||||||||||| ||||||||||||||||||||| ||||||| || ||||  ||    
T  13961225 cggtgcccccggggcacgggttaaggatataaaaaaa-aaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacag 13961323  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacc 173  Q
    |||| |||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  13961324 tttcattttatggtaataattttcttttatggtatgcttaaccagtgctccaagggcaccggttagcaggacc 13961396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 9266901 - 9266727
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||||||||| ||||| |||||| | |||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||| || ||||  ||    
T  9266901 cggtgtccccgcggcactggttaaggatatgaaaaaggaaattatatagtatttaatgcattgaaattgtgtaattaattcataataaagtcaaaaacag 9266802  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||||||||||||||||||||| |||||||||||| |||||||||| | |||   ||||||||||||||||||||    
T  9266801 tttccttttatggtaataattcgcttttatggtatacttaaccagtgctccagaagcaccggttagcaggaccca 9266727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 7 - 177
Target Start/End: Complemental strand, 24178630 - 24178460
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    ||||||||||| |||||| | ||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||| || ||||  ||||||||    
T  24178630 ccccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatctataataaagtcaaaagcagtttcct 24178531  T
Q  107 tttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaa 177  Q
    |||||||||||||||   |||||||||||||||||||||| ||||  |||||||||||||| |||||||||    
T  24178530 tttatggtaataatttcattttatggtatgcttaaccagtgccccgggggcaccggttagccggacccaaa 24178460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 28 - 174
Target Start/End: Original strand, 45431318 - 45431464
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||    
T  45431318 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaatagtttccttttatggtaataattctcttt 45431417  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||| ||| |||||||||| |||||  | | ||||||| ||||||||    
T  45431418 tatgatatacttaaccagtgccccagagactccggttatcaggaccc 45431464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 5694342 - 5694507
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||| |||||| | ||| |||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||| || ||||  ||||||||||    
T  5694342 ccggggcactggttaaggatataaaaagggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttccttt 5694441  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||| ||||||||||||||||||||||| | ||  |||||||||||||||||||||    
T  5694442 tatggtaataattcccttttatggtatgcttaaccagtgctccgggggcaccggttagcaggaccc 5694507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 12072235 - 12072062
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| | |||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||| || ||||  ||    
T  12072235 cggtgcccccggggcaccggttaaggatatgaaaaaggaaattatgtagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacag 12072136  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||| ||||||||||||||||||  |||||||||||||||||||||| ||||  |||||||||||||||| ||||    
T  12072135 ttttcttttatggtaataattcctttttatggtatgcttaaccagtgccccgggggcaccggttagcagcaccc 12072062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 29657784 - 29657957
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| | ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||| || ||||  ||    
T  29657784 cggtgcccccggggcactggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtataattaattgataataaagtcaaaaacag 29657883  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||| |||   |||||||||||||||||||||    
T  29657884 tttccttttttggtaataattcccttttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccc 29657957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 15227762 - 15227925
Alignment:
Q  11 ggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctttta 110  Q
    ||||||| |||||| | |||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||| || ||||  ||||||||||||    
T  15227762 ggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttcctttta 15227861  T
Q  111 tggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||| ||||||||||||||||||||||| ||||   |||||||||||||| |||||    
T  15227862 tggtaataattcccttttatggtatgcttaaccagtgccccggaggcaccggttagcaagaccc 15227925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 14350450 - 14350279
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| |||||| |||| |||||| |||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||| ||||  |     
T  14350450 cggtgcccccggagcaccggttaagggtatgaaaaaggaaattatattgtagttaatgcattaaaattgtgtaattaatttataataatgtcaaaaacaa 14350351  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||| | || |||||||||||||||||| ||||  |||||||||||||||||||||    
T  14350350 tttccttttatggtaataattc-ccttaatggtatgcttaaccagtgcccc-ggggcaccggttagcaggaccc 14350279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 51368940 - 51368813
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||| |||||||||||||| ||||||    
T  51368940 ggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtagttaatttataataatgtcaaaaatagtttccttttatagtaata 51368841  T
Q  119 attctcttttatggtatgcttaaccagt 146  Q
    ||||  ||||||||||||||||||||||    
T  51368840 attccattttatggtatgcttaaccagt 51368813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 43286738 - 43286880
Alignment:
Q  4 tgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagttt 103  Q
    |||||| ||| ||| |||||| | ||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||| || |||| ||||||    
T  43286738 tgtccctgggacactggttaaggatatgaaaaaggaaattatataatagttaatgttttgaaattatgtaattaatttataataaagtcaaaaatagttt 43286837  T
Q  104 ccttttatggtaataattctcttttatggtatgcttaaccagt 146  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  43286838 ccttttatagtaataattctcttttatggtatgcttaaccagt 43286880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 174
Target Start/End: Original strand, 6770377 - 6770519
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||  |||||| ||||||| ||||||||| ||||    
T  6770377 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttcattttatgataataattcccttt 6770476  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||| ||||||||||||||| |||    |||||||||||||||||||    
T  6770477 tatgatatgcttaaccagtatccc----gcaccggttagcaggaccc 6770519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 28 - 174
Target Start/End: Complemental strand, 50128318 - 50128172
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| || ||||  |||||| ||||||||||||||||||||||    
T  50128318 tatgaaaaagaaaattacatagtagttaatgcattgaaattgtgtaattaatttataataaagttaaaagcagtttcattttatggtaataattctcttt 50128219  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||  ||||    ||||||||||||||||||    
T  50128218 tatggtatgcttaaccagtgtcccagaaacaccggttagcaggaccc 50128172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 45449399 - 45449244
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||||| ||| |||||| |||||||||||||||||||| ||| |||| |||||||||| ||||||||| || ||||  ||||||||||||||||||||    
T  45449399 ggttaaagatataaaaaagaaaattatatagtagttaatgcattaaaatagtgtaattaaattataataaagtcaaaagcagtttccttttatggtaata 45449300  T
Q  119 attctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||  ||||||||||||| ||||||||| ||||| ||||| |||||||||||||||    
T  45449299 attgccttttatggtatgtttaaccagtgccccaggggcatcggttagcaggaccc 45449244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 28 - 174
Target Start/End: Complemental strand, 19031961 - 19031815
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| || ||||  |||||||||||||||||||||||  ||||    
T  19031961 tatgaaaaaggaaattatatagtagttaaaacattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataatttccttt 19031862  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||| ||||||||||| |||||||   | ||||||||||||||||||    
T  19031861 tatgatatgcttaacccgtaccccggagacaccggttagcaggaccc 19031815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 8 - 182
Target Start/End: Complemental strand, 48383277 - 48383103
Alignment:
Q  8 cccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctt 107  Q
    |||||||||| |||||| | | |||||||| |||||||||   |||||||||||||||||  ||||||||||| ||||||| || ||||  |||||||||    
T  48383277 cccggggcactggttaaggatgtgaaaaagaaaattatatgaaagttaatgtattgaaataatgtaattaattgataataaagtcaaaaacagtttcctt 48383178  T
Q  108 ttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaataaat 182  Q
    ||||||||||||||| ||||||||||||||||||||| | || || |||||| ||||||||||||||||| ||||    
T  48383177 ttatggtaataattcccttttatggtatgcttaaccaatgcctcaggggcactggttagcaggacccaaaaaaat 48383103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 3097690 - 3097819
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || ||||  ||||| ||||||||||||||    
T  3097690 ggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagttttcttttatggtaata 3097789  T
Q  119 attctcttttatggtatgcttaaccagtac 148  Q
    |||  |||||||||||||||||||||||||    
T  3097790 atttccttttatggtatgcttaaccagtac 3097819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 3784886 - 3784713
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| |||| | |||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| || ||||  |     
T  3784886 cggtgcccccagtgcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacaa 3784787  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||| |||||||||||||||||  |||||||||||||||||||| ||  |||  |||||||||||||| ||||||    
T  3784786 ttttcttttatggtaataatttccttttatggtatgcttaacccgtgtcccgggggcaccggttagccggaccc 3784713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 17333449 - 17333284
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    |||| |||||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| || ||||  ||||||||    
T  17333449 cccccgggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattcataataaagtcaaaaacagtttcct 17333350  T
Q  107 tttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||| ||||| ||| |||||||||||  |||||||| | ||||   ||||||||||||||||||||    
T  17333349 tttatgataatacttcccttttatggta--cttaaccaatgccccggaggcaccggttagcaggaccc 17333284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 32 - 152
Target Start/End: Complemental strand, 35985763 - 35985643
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||| | |||||     
T  35985763 aaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtgaaaaacagtttccttttatggtaataattcccatttata 35985664  T
Q  132 gtatgcttaaccagtacccca 152  Q
    |||| |||||||||| |||||    
T  35985663 gtatacttaaccagtgcccca 35985643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 177
Target Start/End: Original strand, 48071503 - 48071670
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    |||||| || |||||| | |||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| || ||||  ||||||||||    
T  48071503 ccggggtactggttaaggatatgtaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttt 48071602  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaa 177  Q
    ||||||||||||| |||||||| |||||||||||| || | || ||  ||||||| |||||||||||||    
T  48071603 tatggtaataattatcttttatagtatgcttaaccggtgctcc-agaacaccggtcagcaggacccaaa 48071670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 41730318 - 41730495
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagt---taatgtattgaaattgtgtaattaatttataataatgtgaaaat 97  Q
    ||||| ||| ||||||||||||||   ||||||||| ||||||||||||||||   ||||| ||||||||||| ||||||||||||||||| || ||||     
T  41730318 cggtgccccaggggcacgggttaagaatatgaaaaaagaaattatatagtagtaattaatgcattgaaattgtttaattaatttataataaagtcaaaaa 41730417  T
Q  98 tagtttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
     |||||||||||||| ||||||||| ||||||||||||||||||| ||| |||||   |||| |||||||||||||||    
T  41730418 cagtttccttttatgataataattcccttttatggtatgcttaacaagtgccccagaagcactggttagcaggaccca 41730495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 29210434 - 29210540
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  29210434 ccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttt 29210533  T
Q  109 tatggta 115  Q
    |||||||    
T  29210534 tatggta 29210540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 29683208 - 29683354
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaa-aggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaatta 99  Q
    ||||| ||||||||||| |||||||| ||| |||| ||||||||||||||||||||||| |||||||| || ||||||||||||||||| || ||||  |    
T  29683208 cggtgcccccggggcactggttaaagatataaaaaaaggaaattatatagtagttaatgcattgaaatcgtataattaatttataataaagtcaaaaaca 29683307  T
Q  100 gtttccttttatggtaataattctcttttatggtatgcttaaccagt 146  Q
    ||||| |||||| |||||||||| |||||||||||||||||||||||    
T  29683308 gtttcattttatagtaataattcacttttatggtatgcttaaccagt 29683354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 36446467 - 36446353
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||||||||||||| |||||||||| ||||||||    
T  36446467 aaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatagtaataattcccttttatg 36446368  T
Q  132 gtatgcttaaccagt 146  Q
    ||||| |||||||||    
T  36446367 gtatgtttaaccagt 36446353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 8473069 - 8472914
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | ||| ||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||| || ||||  |||||| ||||||  |||||    
T  8473069 ggttaaggatataaaaaaggaaattatataatagttaatgcattaaaattgtgtaattaatttataataaagtcaaaaacagtttcattttataataata 8472970  T
Q  119 attctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||||| ||||||||||  ||| |||  |||||||||||||||||    
T  8472969 attctcttttatggtatacttaaccagtgtcccgaggataccggttagcaggaccc 8472914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 179
Target Start/End: Complemental strand, 47532816 - 47532666
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||  ||||||| || |||| || |||||||||||  ||||||||| ||||    
T  47532816 tatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatg-ataataaagtcaaaaataatttccttttataataataattcccttt 47532718  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaata 179  Q
    ||||||||||||||||| | |||| | | |||||||||||| ||||||||||    
T  47532717 tatggtatgcttaaccaatgccccgaagacaccggttagcaagacccaaata 47532666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 23473619 - 23473463
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | |||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||| ||  |||  ||||||||||||||||||||    
T  23473619 ggttaaggatatgaaaaaggagattatatagcagttaatgtattgaaattgtataattaatttataataaagtttaaagcagtttccttttatggtaata 23473520  T
Q  119 attctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||   ||||||  ||||||||||| || | || |||| ||||||||||||||||||    
T  23473519 atttctttttataatatgcttaacctgtgctccgagggtaccggttagcaggaccca 23473463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 12306961 - 12307075
Alignment:
Q  31 gaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttat 130  Q
    ||||||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| || ||||  || |||||||||||||||||||||||||||||    
T  12306961 gaaaaagaaaattatat-gtagttaatacattgaaattgtgtaattaatttataataaagtcaaaaacagattccttttatggtaataattctcttttat 12307059  T
Q  131 ggtatgcttaaccagt 146  Q
    ||||||||||||||||    
T  12307060 ggtatgcttaaccagt 12307075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 38335200 - 38335317
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||||| |||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||| || ||||  ||||| |||||||| |||||    
T  38335200 ggttaaagatatgaaaaaggaaattatatagtaattaatgcattgtaattgtgtaattaatttataataaagtcaaaaacagttttcttttatgataata 38335299  T
Q  119 attctcttttatggtatg 136  Q
    |||| |||||||||||||    
T  38335300 attcacttttatggtatg 38335317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 175
Target Start/End: Original strand, 30657648 - 30657789
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||| || ||||  ||      |||||| ||||||||| ||||    
T  30657648 tatgaaaaaagaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacag------tttatgataataattcccttt 30657741  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    ||||||||||||||||||||||||   ||||||| |||||||||||||    
T  30657742 tatggtatgcttaaccagtaccccggaggcaccgattagcaggaccca 30657789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 39 - 168
Target Start/End: Original strand, 52431632 - 52431761
Alignment:
Q  39 aaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataa-ttctcttttatggtatgc 137  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||  | ||| ||||||||||||||| |||  |||| ||||||||    
T  52431632 aaattatatagtagttaatgcattgaaattgtgtaattaatttataa-aatgtcaaaagcaattttcttttatggtaataatttcctttttttggtatgc 52431730  T
Q  138 ttaaccagtaccccaagggcaccggttagca 168  Q
    ||||||||| ||||| || ||||||||||||    
T  52431731 ttaaccagtgccccagggacaccggttagca 52431761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 143
Target Start/End: Original strand, 52749624 - 52749757
Alignment:
Q  10 cggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctttt 109  Q
    |||||||  |||||||| ||||||||||||||||||||| ||||||||||||||||||||| || | |||||| ||||| || ||||  | |||  ||||    
T  52749624 cggggcattggttaaagatatgaaaaaggaaattatataatagttaatgtattgaaattgtatactaaatttacaataaagttaaaaacaattttttttt 52749723  T
Q  110 atggtaataattctcttttatggtatgcttaacc 143  Q
    |||||||||||||  |||||||||||| ||||||    
T  52749724 atggtaataattcctttttatggtatgtttaacc 52749757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 175
Target Start/End: Original strand, 30217806 - 30217947
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    ||||||| ||||| | ||||||||||| ||| ||||| | ||||||||||||||||| || |||| |||||| |||||||||||||||||   |||||||    
T  30217806 aaaaagggaattagagagtagttaatgcatttaaattatttaattaatttataataaagtcaaaaatagttttcttttatggtaataatttctttttatg 30217905  T
Q  132 gtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||||||||| |||| |||| | |||||| ||||||||||||||    
T  30217906 gtatgcttaa-cagtgccccga-ggcacctgttagcaggaccca 30217947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 37503260 - 37503361
Alignment:
Q  34 aaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatggt 133  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||| ||  | |||| || |||||||||||||||| |||| |||||| ||||    
T  37503260 aaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataa-aaaatcaaaaatattttccttttatggtaacaattgtcttttttggt 37503358  T
Q  134 atg 136  Q
    |||    
T  37503359 atg 37503361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 168
Target Start/End: Complemental strand, 3838919 - 3838783
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataa-ttctcttttat 130  Q
    ||||||||||||||||| ||||||||| ||| |||||||||||||||||||||| ||||| ||||  | |||  |||||||| ||||| |||  |||| |    
T  3838919 aaaaaggaaattatataatagttaatgcattaaaattgtgtaattaatttataa-aatgtcaaaagcaatttttttttatggcaataatttccttttttt 3838821  T
Q  131 ggtatgcttaaccagtaccccaagggcaccggttagca 168  Q
     |||||||||| ||||||||| |||||||| |||||||    
T  3838820 agtatgcttaatcagtaccccgagggcaccagttagca 3838783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 15282669 - 15282600
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 88  Q
    |||||| | |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15282669 ggttaaggatatgaaaaagaaaattatatagtagttaatatattgaaattgtgtaattaatttataataa 15282600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 19010778 - 19010686
Alignment:
Q  83 taataatgtgaaaattagtttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||||| || |||| ||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||| |  |||||||||| ||||||||    
T  19010778 taataaagtcaaaaatagtttccttttatggtaataattcccttttatggtatgattaaccagtgccccaggaacaccggttagtaggaccca 19010686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 168
Target Start/End: Original strand, 39081845 - 39081980
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    ||||| ||||||||||| ||||||||||||||||||| | |||||||||||||| ||| | ||||  |||||| ||||||| |||||||| |||||| |     
T  39081845 aaaaatgaaattatatactagttaatgtattgaaattttataattaatttataa-aatattaaaagcagtttcattttatgataataattttctttttta 39081943  T
Q  132 gtatgcttaaccagtaccccaagggcaccggttagca 168  Q
     ||||||||| ||||||| |  ||| |||||||||||    
T  39081944 atatgcttaatcagtacctcgggggtaccggttagca 39081980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 142
Target Start/End: Complemental strand, 37315409 - 37315300
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||| || || |||   ||||| |||||||| ||||||||   |||| ||    
T  37315409 aaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataa-aaagtcaaagacagttttcttttatgctaataatttctttttttg 37315311  T
Q  132 gtatgcttaac 142  Q
    |||||||||||    
T  37315310 gtatgcttaac 37315300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 26228237 - 26228293
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 88  Q
    ||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  26228237 aaaaatgaaattatatagtagttaatgcattgaaattatgtaattaatttataataa 26228293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 39497347 - 39497430
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttat 111  Q
    |||||||||| |||||||||||||||||||| ||| ||||| | ||||||||||||||||| || |||| || ||| |||||||    
T  39497347 tatgaaaaagaaaattatatagtagttaatgcattaaaattatataattaatttataataaagtcaaaaataattttcttttat 39497430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 19011162 - 19011112
Alignment:
Q  8 cccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatg 58  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  19011162 cccggggcacgggttaaggatatgaaaaaggaaattatatagtagttaatg 19011112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 35700792 - 35700739
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 85  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  35700792 aaaaaggaaattatacagtagttaatacattgaaattgtgtaattaatttataa 35700739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 39912443 - 39912368
Alignment:
Q  10 cggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 85  Q
    |||||||| | |||| | ||| |||| |||||||||||| ||||||||| ||||||||||||| ||||||||||||    
T  39912443 cggggcactgattaaggatataaaaagggaaattatatactagttaatgcattgaaattgtgtgattaatttataa 39912368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 21112731 - 21112681
Alignment:
Q  124 cttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||||||||||    
T  21112731 cttttatggtatgcttaactagtgccccgagggcaccggttagcaggaccc 21112681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 29210530 - 29210580
Alignment:
Q  124 cttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  29210530 cttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 29210580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 19011095 - 19011057
Alignment:
Q  46 atagtagttaatgtattgaaattgtgtaattaatttata 84  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  19011095 atagtagttaatgcattgaaattgtgtaattaatttata 19011057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 21117473 - 21117423
Alignment:
Q  124 cttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||  || |||| ||||||||||||||||||||||    
T  21117473 cttttatggtatgcttaacttgtgccccgagggcaccggttagcaggaccc 21117423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 49867474 - 49867524
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaattta 82  Q
    |||||| || |||||||||| ||||||| ||||||||||||||||||||||    
T  49867474 aaaaagaaagttatatagtaattaatgttttgaaattgtgtaattaattta 49867524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 28725977 - 28725904
Alignment:
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    ||||||||||||||| ||||  ||||| | ||||||||||||||| ||||  || |||||||||||| ||||||    
T  28725977 ttccttttatggtaagaatttccttttttcgtatgcttaaccagtgccccggggacaccggttagcaagaccca 28725904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 38595824 - 38595751
Alignment:
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    ||||||||||||||| |||| |||||| | | ||||||||||||| ||||   |||||||||||||| ||||||    
T  38595824 ttccttttatggtaagaattttctttttttgcatgcttaaccagtgccccggaggcaccggttagcatgaccca 38595751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 26228300 - 26228364
Alignment:
Q  110 atggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||| |||||||||||||||||||  |||| ||  || |||||||||||| |||||    
T  26228300 atggtaataattcccttttatggtatgcttaactggtactccggggacaccggttagcatgaccc 26228364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 28481875 - 28481940
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 88  Q
    |||||| | ||||||||||||||||||| ||||    ||| ||| |||||||||||||||||||||||||    
T  28481875 ggttaaggatatgaaaaaggaaattatacagta----atgcattaaaattgtgtaattaatttataataa 28481940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 117
Target Start/End: Complemental strand, 14881086 - 14881036
Alignment:
Q  67 ttgtgtaattaatttataataatgtgaaaattagtttccttttatggtaat 117  Q
    |||| ||||||||||||||||| || ||||  |||||||||||||||||||    
T  14881086 ttgtataattaatttataataaagtcaaaaacagtttccttttatggtaat 14881036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 30664239 - 30664173
Alignment:
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagca 168  Q
    ||||||||||||||| ||||   |||| | ||||||||||||||| ||||  |||||||||||||||    
T  30664239 ttccttttatggtaagaatttcttttttttgtatgcttaaccagtgccccgtgggcaccggttagca 30664173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 16590356 - 16590304
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 85  Q
    |||||| ||||||||||  | |||||||||| ||||||||||||||||||||||    
T  16590356 aaaaagaaaattatataacaattaatgtatt-aaattgtgtaattaatttataa 16590304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 23822593 - 23822519
Alignment:
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaat 178  Q
    ||||||||||||||| |||| | ||||   ||||||||||||| | ||||  ||||||||||||||| |||||||||    
T  23822593 ttccttttatggtaagaatttttttttt--gtatgcttaaccaatgccccgggggcaccggttagcatgacccaaat 23822519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 10976048 - 10976008
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaatt 68  Q
    |||||||||||| |||||||||||||||||| ||| |||||    
T  10976048 tatgaaaaaggagattatatagtagttaatgcattaaaatt 10976008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 7e-64; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 34651000 - 34650833
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    |||| |||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||||||||    
T  34651000 cccccgggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttcct 34650901  T
Q  107 tttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  34650900 tttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 34650833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 11958140 - 11957967
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||||| ||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| || ||||  ||    
T  11958140 cggtgcccccggggcacaggttaaagatataaaaaaggaaattatatagtagttaatgcaatgaaattgtgtaattaattgataataaagtcaaaaacag 11958041  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  11958040 tttccttttatggtaataattcccttttatggcatgcttaaccagtgccccaggggcaccggttagcaggaccc 11957967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 8787352 - 8787525
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||||||||||||||  |||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||  ||    
T  8787352 cggtgtccccggggcattggttaagggtatgaaaaatgaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatatcaaaaacag 8787451  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||| |||||||||  ||||||||||||||||||| || ||||  |||||||||||||||||||||    
T  8787452 tttccttttatgataataattccattttatggtatgcttaacctgtgccccgggggcaccggttagcaggaccc 8787525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 30 - 174
Target Start/End: Complemental strand, 40564548 - 40564404
Alignment:
Q  30 tgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctctttta 129  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  | |||  ||||||||||||||||||||||||    
T  40564548 tgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaatttttttttatggtaataattctctttta 40564449  T
Q  130 tggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  40564448 tggtatgcttaaccaataccccaagggcaccggttagcaggaccc 40564404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 13661821 - 13661994
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| |||||| |||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| || | ||  ||    
T  13661821 cggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacag 13661920  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||   ||||||||||||||||||||    
T  13661921 tttccttttatggtaataattctcttttatggtatgcttaacccgtgccccggaggcaccggttagcaggaccc 13661994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 10054525 - 10054352
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||| ||||  ||    
T  10054525 cggtgcccccggggcactggttaagggtatgaaaaaggaaattatataataattaatgcattgaaattgtgtaattaatttataataatgtcaaaa-cag 10054427  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    ||||||||||||||||||||||  |||||||||||| |||||| || ||||  ||| ||||||||||||||||||    
T  10054426 tttccttttatggtaataattcctttttatggtatgtttaacccgtgccccgggggtaccggttagcaggaccca 10054352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 35132535 - 35132707
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||| ||| |||||| | ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| || ||||  ||    
T  35132535 cggtgcccccgggacactggttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataataaagtcaaaaacag 35132634  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||| | |||||||||||||||||||||||||||||||||||||| | ||||  |||||||||||||||||||||    
T  35132635 ttttc-tttatggtaataattctcttttatggtatgcttaaccaatgccccgggggcaccggttagcaggaccc 35132707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 35504413 - 35504241
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||| ||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||    
T  35504413 cggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacag 35504314  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    || |||||||||| |||||||| |||||||||||||||||||| ||   ||  |||||||||||||||||||||    
T  35504313 ttcccttttatggcaataattcccttttatggtatgcttaacccgt-gtccgggggcaccggttagcaggaccc 35504241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 11846085 - 11846258
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||||||||||| |||  | ||| | ||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| || |||| |||    
T  11846085 cggtgtccccgggacactagctaaggatataaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataataaagtcaaaagtag 11846184  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||||||| || ||||||| ||||||||||||||| |||| ||||||  ||||||||||||||    
T  11846185 tttccttttatggtaataaatcccttttatagtatgcttaaccagtgcccctagggcatgggttagcaggaccc 11846258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 12506335 - 12506460
Alignment:
Q  27 gtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctctt 126  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||||||||||||| ||||||||||||||    
T  12506335 gtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatagtaataattctctt 12506434  T
Q  127 ttatggtatgcttaaccagtacccca 152  Q
    |||||| ||||||||||||| |||||    
T  12506435 ttatggaatgcttaaccagtgcccca 12506460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 21547566 - 21547388
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||||||||||| ||  |||||| | ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||    
T  21547566 cggtgtccccggg-catcggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacag 21547468  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaataa 180  Q
    |||| ||||| | ||||||||||| ||||||||||||||||||||||||||   | ||||||||||||||||||| ||||    
T  21547467 tttcattttaagttaataattctcatttatggtatgcttaaccagtaccccggagacaccggttagcaggacccatataa 21547388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 168
Target Start/End: Original strand, 6283583 - 6283742
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    |||||||||  ||||||| |||||||||| |||||||||| || |||||| ||||||||||||||||||||||||||||| || ||||  | ||| ||||    
T  6283583 ccggggcactagttaaagatatgaaaaagaaaattatataataattaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttt 6283682  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagca 168  Q
    ||||||||||||||  |||||||||||||||||||||| ||| | |||||||||||||||    
T  6283683 tatggtaataattcatttttatggtatgcttaaccagtgccctaggggcaccggttagca 6283742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 9721753 - 9721640
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    |||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||| || ||||  ||||| |||||||| ||||||||| ||||    
T  9721753 tatgaaaaaggaaattatatagtaattaatgcattgaaattgtttaattaatttataataaagtcaaaaacagttttcttttatgataataattcccttt 9721654  T
Q  128 tatggtatgcttaa 141  Q
    ||||||||| ||||    
T  9721653 tatggtatgtttaa 9721640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 33 - 174
Target Start/End: Original strand, 10955997 - 10956137
Alignment:
Q  33 aaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatgg 132  Q
    |||||| ||||||| ||||||||||| ||||||||||| |||||||||||||| || || ||||  | |||||||||||||||||||||  ||||||||     
T  10955997 aaaagggaattataaagtagttaatgcattgaaattgt-taattaatttataacaaagtcaaaaacaatttccttttatggtaataatttccttttatga 10956095  T
Q  133 tatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||||||| |  | ||||||||||| |||||    
T  10956096 tatgcttaaccagtaccccgaatgtaccggttagcaagaccc 10956137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 13470174 - 13470283
Alignment:
Q  11 ggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctttta 110  Q
    ||||||| |||||| | ||||||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||| || ||||  ||||||||||||    
T  13470174 ggggcactggttaaggatatgaaaaaggaaataatatagtagtcaatgcattgaaattgtataattaatttataataaagtcaaaaacagtttcctttta 13470273  T
Q  111 tggtaataat 120  Q
    ||||||||||    
T  13470274 tggtaataat 13470283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 20175240 - 20175381
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||||| ||| | ||| |||||||  ||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  |     
T  20175240 cggtgtctccgagacactggttaaaaatataaaaaaagaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaa 20175339  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaac 142  Q
    ||| |||||||| ||||||||| |||||||  ||||||||||    
T  20175340 ttttcttttatgataataattcccttttataatatgcttaac 20175381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 39069405 - 39069527
Alignment:
Q  12 gggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa-tgtgaaaattagtttcctttta 110  Q
    |||||| |||||| |||||||||| |||||||||||||||||||||| ||| ||||||||||||||   |||||||| ||||||||  | ||||||||||    
T  39069405 gggcactggttaagggtatgaaaa-ggaaattatatagtagttaatgcattaaaattgtgtaatta---tataataattgtgaaaaacaatttcctttta 39069500  T
Q  111 tggtaataattctcttttatggtatgc 137  Q
    ||||||||||||||||||||| |||||    
T  39069501 tggtaataattctcttttatgatatgc 39069527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 10069982 - 10070095
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||| || ||||  ||    
T  10069982 cggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaa-tgataataaagtcaaaaacag 10070080  T
Q  101 tttccttttatggta 115  Q
    |||| ||||||||||    
T  10070081 tttctttttatggta 10070095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 19436982 - 19436866
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||||||||||||||||| ||||| | ||||||||||| |||||||||||| |||| || |||| ||||||  ||||||||||||||||||||||    
T  19436982 tatgaaaaaggaaattatatagtggttaaagcattgaaattgtataattaatttat-ataaagttaaaaatagttt-tttttatggtaataattctcttt 19436885  T
Q  128 tatggtatgcttaaccagt 146  Q
    ||||||||| || ||||||    
T  19436884 tatggtatgtttcaccagt 19436866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 19647823 - 19647717
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||| || | ||  ||||||||||    
T  19647823 ccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtataattaattgataataaagtcataaacagtttccttt 19647724  T
Q  109 tatggta 115  Q
    |||||||    
T  19647723 tatggta 19647717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 175
Target Start/End: Original strand, 40057326 - 40057494
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    |||| |||||| | |||| | |||||||||||||||||||||||||||| || |||||||| || |||||||||||||||||  | ||||  ||||| ||    
T  40057326 ccccagggcaccgattaaggatatgaaaaaggaaattatatagtagttagtgcattgaaatagtataattaatttataataaaatcaaaagcagttttct 40057425  T
Q  107 tttatggtaataattctcttttatggtatgcttaaccagt-accccaagggcaccggttagcaggaccca 175  Q
    ||||| |||||| ||| |||||||| | || ||||||||| ||| | | |||||||||||||||||||||    
T  40057426 tttatagtaatatttcccttttatgatgtgtttaaccagtgacctcga-ggcaccggttagcaggaccca 40057494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 31909662 - 31909785
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | ||| |||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||||  |||||||     || |||||    
T  31909662 ggttaaggatattaaaagggaaattatatagtagttaatgcattgaaattgtgtaattgatttataataaagtcaaaaacagtttcc-----tgataata 31909756  T
Q  119 attctcttttatggtatgcttaaccagta 147  Q
    ||| |||||||||||||||||||||||||    
T  31909757 attttcttttatggtatgcttaaccagta 31909785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 39067091 - 39066973
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagt-agttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaat 117  Q
    |||||| | ||||||||| ||||||||||| | ||||||| |||||||||| ||||||||||||||||||| || ||||  | | |||||||||||||||    
T  39067091 ggttaaggatatgaaaaaagaaattatataattagttaatatattgaaattatgtaattaatttataataaagtcaaaaacaatatccttttatggtaat 39066992  T
Q  118 aattctcttttatggtatg 136  Q
    |||||||||||||| ||||    
T  39066991 aattctcttttatgttatg 39066973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 4837276 - 4837357
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 88  Q
    ||||||||||| ||||||   |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  4837276 ccccggggcaccggttaagaatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaatttataataa 4837357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 2619729 - 2619643
Alignment:
Q  2 ggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 88  Q
    |||||| ||||| |||  ||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2619729 ggtgtctccgggacacttgttaaggatatgaaaaagaaaattatttagtagttaatgtattgaaattgtgtaattaatttataataa 2619643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 4268620 - 4268716
Alignment:
Q  46 atagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatggtatgcttaacc 143  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||  | ||||  ||||||||||||||||||||||| |||||| ||||||||||||||    
T  4268620 atagtagttaatgcattaaaattgtgtaattaatttataaaaaa-taaaaaacagtttccttttatggtaataattttcttttttggtatgcttaacc 4268716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 6284839 - 6284892
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  6284839 aaaaaggaaattatatagtaattaatgtattgaaattgtataattaatttataa 6284892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 31467834 - 31467907
Alignment:
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    ||||||||||||||| ||||  ||||| | ||||||||||||||| ||||| || |||||||||||| ||||||    
T  31467834 ttccttttatggtaagaatttcctttttttgtatgcttaaccagtgccccagggacaccggttagcaagaccca 31467907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 5302422 - 5302368
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattg-aaattgtgtaattaatttataa 85  Q
    ||||| ||||||||||| |||||| ||||||| |||||||||||||||| |||||    
T  5302422 aaaaaagaaattatataatagttattgtattgaaaattgtgtaattaatctataa 5302368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 8927593 - 8927556
Alignment:
Q  137 cttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  8927593 cttaaccagtgccccaggggcaccggttagcaggaccc 8927556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 10070086 - 10070135
Alignment:
Q  125 ttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||| |  |||| | |||||||||||||||||||    
T  10070086 ttttatggtatgcttaaccaatgtcccaggagcaccggttagcaggaccc 10070135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 136
Target Start/End: Original strand, 22973732 - 22973832
Alignment:
Q  35 aaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatggta 134  Q
    |||||| ||||||||||  ||||| ||| |||||||||||||||||||| | || ||  |||  |||||||||||||| |||||| | || ||| |||||    
T  22973732 aaggaagttatatagtaactaatgaattaaaattgtgtaattaatttatca-aaagtataaaagagtttccttttatgataataaatttcatttttggta 22973830  T
Q  135 tg 136  Q
    ||    
T  22973831 tg 22973832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 4e-62; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 30675745 - 30675574
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||    
T  30675745 cggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacag 30675646  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacc 173  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||  || |||||||||||||||||    
T  30675645 tttccttttatggtaataattc-cttttatggtatgcttaaccagtgccccggggacaccggttagcaggacc 30675574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 168487 - 168657
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  168487 ccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttt 168586  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaata 179  Q
    ||||||||||||||  |||||||||||||||||||| | ||||  ||||||||||||||||||||| ||||    
T  168587 tatggtaataattccattttatggtatgcttaaccaatgccccgggggcaccggttagcaggaccctaata 168657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 7 - 175
Target Start/End: Complemental strand, 16888711 - 16888543
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    |||| |||||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||||||||    
T  16888711 cccccgggcacaggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttcct 16888612  T
Q  107 tttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||||||||||||||||||||| ||||||||||||||| | ||||  ||||||||||||||||||||||    
T  16888611 tttatggtaataattctcttttgtggtatgcttaaccaatgccccgggggcaccggttagcaggaccca 16888543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 34228695 - 34228871
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||| ||||||| |||||| | |||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||| || ||||  ||    
T  34228695 cggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaattgataataaagtcaaaaacag 34228794  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaa 177  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  34228795 tttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggacccaaa 34228871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 20831726 - 20831543
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||| ||| |||||| | ||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| || ||||  ||    
T  20831726 cggtgcccccgggacactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaatagtataattaatttataataaagtcaaaagcag 20831627  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaataaatat 184  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| | ||  || ||||||||||||||||||| ||||||||    
T  20831626 tttccttttatggtaataattctcttttatggtatgcttaatcagtgctcccgggacaccggttagcaggacccatataaatat 20831543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 27988664 - 27988500
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||| |||||| | ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| || ||||  ||||||||||    
T  27988664 ccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttt 27988565  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||| |||||||||||||||||||||||  |||  |||||||||||||||||||||    
T  27988564 tatggtaataattcccttttatggtatgcttaaccagt-gcccgggggcaccggttagcaggaccc 27988500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 28045966 - 28045802
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||| |||||| | ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| || ||||  ||||||||||    
T  28045966 ccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttt 28045867  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||| |||||||||||||||||||||||  |||  |||||||||||||||||||||    
T  28045866 tatggtaataattcccttttatggtatgcttaaccagt-gcccgggggcaccggttagcaggaccc 28045802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 13643025 - 13643197
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| | || |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || ||||  |     
T  13643025 cggtgcccccggggcactggttaaggatacgaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaa-aaa 13643123  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
     ||||||||||||||||||||||||||||||||||||||||||||| ||| | | |||||||||||||||||||    
T  13643124 attccttttatggtaataattctcttttatggtatgcttaaccagtgccctaggagcaccggttagcaggaccc 13643197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 13743450 - 13743622
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| | || |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || ||||  |     
T  13743450 cggtgcccccggggcactggttaaggatacgaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaa-aaa 13743548  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
     ||||||||||||||||||||||||||||||||||||||||||||| ||| | | |||||||||||||||||||    
T  13743549 attccttttatggtaataattctcttttatggtatgcttaaccagtgccctaggagcaccggttagcaggaccc 13743622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 33357301 - 33357152
Alignment:
Q  2 ggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagt 101  Q
    |||| |||||| |||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  |||    
T  33357301 ggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagt 33357202  T
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtacccc 151  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  33357201 ttccttttatggtaataattctcttttatggtatgcttaactagtgcccc 33357152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 7 - 146
Target Start/End: Original strand, 21595865 - 21596004
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    |||| |||||| |||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||  ||||||||    
T  21595865 cccccgggcactggttaagggtatgaaaaaggaaattatataggagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttcct 21595964  T
Q  107 tttatggtaataattctcttttatggtatgcttaaccagt 146  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  21595965 tttatggtattaattcccttttatggtatgcttaaccagt 21596004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 4537909 - 4537744
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||| |||||| | ||| ||| ||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| || ||||  ||||||||||    
T  4537909 ccggggcactggttaaggatataaaataggaaattatatagtagttaatgcattgaaattatgtaattaattgataataaagtcaaaaacagtttccttt 4537810  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||| |||||||||||||||||||| || |||||  ||||||||||||||||||||    
T  4537809 tatggtaataattcccttttatggtatgcttaacctgtgccccagaggcaccggttagcaggaccc 4537744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 42035154 - 42034981
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| |||||| |||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||  |     
T  42035154 cggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaa 42035055  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||| |||||||||||||||||| |||||||||||||||||||  || |||||  | ||||||||||| ||||||    
T  42035054 ttttcttttatggtaataattcccttttatggtatgcttaacacgtgccccagagacaccggttagcgggaccc 42034981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 2805427 - 2805260
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    ||||||| ||| |||||| | ||||||||||||||||||||| ||||||||| |||||||||||||||||||  |||||||| || ||||  ||||||||    
T  2805427 ccccgggacactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaacctataataaagtcaaaagcagtttcct 2805328  T
Q  107 tttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||   ||||||||||||| ||||||    
T  2805327 tttatggtaataattcccttttatggtatgcttaaccagtgccccggaggcaccggttagccggaccc 2805260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 28 - 175
Target Start/End: Complemental strand, 7304664 - 7304517
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||||||||||||||  |||||||||||||    
T  7304664 tatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgaaaataattctcttt 7304565  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    ||||||||||||||||||| | ||  ||||||||||||| ||||||||    
T  7304564 tatggtatgcttaaccagtgctccgggggcaccggttagtaggaccca 7304517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 16394234 - 16394059
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| | | |||||||| |||||||||| ||||||||| ||||||||  ||||||||||| ||||||| || ||||  ||    
T  16394234 cggtgcccccggggcactggttaaggatgtgaaaaagaaaattatataatagttaatgcattgaaataatgtaattaattgataataaagtcaaaaacag 16394135  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaa 176  Q
    |||||||||||| ||||||||||||||||||||||||||||||| | ||||  |||||||||||||||||||||||    
T  16394134 tttccttttatgctaataattctcttttatggtatgcttaaccaatgccccgggggcaccggttagcaggacccaa 16394059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 43119230 - 43119404
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| || |||||||| | |||||| |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||  ||    
T  43119230 cggtgccctcggggcactgattaaagatatgaaaaagaaaattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaaacag 43119329  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaa 176  Q
    ||| |||||||||| ||||||||||||||||||||||||||||| |  |||  |||||||||||||||||||||||    
T  43119330 ttttcttttatggtgataattctcttttatggtatgcttaaccaatggccc-ggggcaccggttagcaggacccaa 43119404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 11112660 - 11112825
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||| ||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||||| ||||    
T  11112660 ccgggacactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttt 11112759  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||| ||||||||| |||||||||||||||||||| || |||   |||||| ||||||||||||||    
T  11112760 tatgataataattcacttttatggtatgcttaacctgtgccctgggggcactggttagcaggaccc 11112825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 172
Target Start/End: Complemental strand, 16890643 - 16890482
Alignment:
Q  11 ggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctttta 110  Q
    |||||||  ||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| || ||||  ||||||||||||    
T  16890643 ggggcaccagttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttcctttta 16890544  T
Q  111 tggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggac 172  Q
    ||||||||||||  ||||||||||||||||||| || || |  |||||||||||||||||||    
T  16890543 tggtaataattcctttttatggtatgcttaaccggtgcctccggggcaccggttagcaggac 16890482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 6 - 169
Target Start/End: Complemental strand, 9254069 - 9253907
Alignment:
Q  6 tccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcc 105  Q
    |||||||||||| |||||| | ||||||||| |||||| |||||||||||||| ||||||||||||||||||||  ||||||| || ||||  |||||||    
T  9254069 tccccggggcactggttaaggatatgaaaaatgaaattttatagtagttaatgcattgaaattgtgtaattaatg-ataataaagtcaaaaacagtttcc 9253971  T
Q  106 ttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcag 169  Q
    |||||| |||||||||||||||||||||||||||||||| |  |||| ||||||||||||||||    
T  9253970 ttttatagtaataattctcttttatggtatgcttaaccaatgtcccaggggcaccggttagcag 9253907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 12203885 - 12204012
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  |||||||||||||| |||||    
T  12203885 ggttaagggtatgaaaaaagaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatgataata 12203984  T
Q  119 attctcttttatggtatgcttaaccagt 146  Q
    |||| ||||||||||||||| |||||||    
T  12203985 attcccttttatggtatgctgaaccagt 12204012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 12448313 - 12448440
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  |||||||||||||| |||||    
T  12448313 ggttaagggtatgaaaaaagaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatgataata 12448412  T
Q  119 attctcttttatggtatgcttaaccagt 146  Q
    |||| ||||||||||||||| |||||||    
T  12448413 attcccttttatggtatgctgaaccagt 12448440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 36730484 - 36730599
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  |||||||||||||||||||||||||||||    
T  36730484 tatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattctcttt 36730583  T
Q  128 tatggtatgcttaacc 143  Q
    ||| ||||||||||||    
T  36730584 tatagtatgcttaacc 36730599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 4648214 - 4648353
Alignment:
Q  8 cccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctt 107  Q
    |||||||||| | |||| | ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||  |||||| ||    
T  4648214 cccggggcactgattaaggatatgaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataataatgtcaaaaacagtttcttt 4648313  T
Q  108 ttatggtaataattctcttttatggtatgcttaaccagta 147  Q
    | ||||||||||||| |||||||| |||||||||||||||    
T  4648314 tgatggtaataattcccttttatgatatgcttaaccagta 4648353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 29444306 - 29444168
Alignment:
Q  8 cccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctt 107  Q
    |||||||||| | |||| | ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| || ||||  ||||| |||    
T  29444306 cccggggcactgattaaggatatgaaaaaggaaattatatagtagttaacgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttctt 29444207  T
Q  108 ttatggtaataattctcttttatggtatgcttaaccagt 146  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  29444206 ttatggtaataattcccttttatggtatgtttaaccagt 29444168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 16785110 - 16785241
Alignment:
Q  12 gggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttat 111  Q
    |||||| |||||| | ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||  |||||||||||||    
T  16785110 gggcactggttaaggatatgaaaaaagaaattatatagcagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttat 16785209  T
Q  112 ggtaataattctcttttatggtatgcttaacc 143  Q
      ||||||||||||||||||||||| ||||||    
T  16785210 aataataattctcttttatggtatgattaacc 16785241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 28626791 - 28626926
Alignment:
Q  11 ggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctttta 110  Q
    ||||||| |||||| | | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||  |||||| |||||    
T  28626791 ggggcaccggttaaggatgtgaaaaaggaaattatatagtagttaatgtattgaaattgtgtgattaatttataataaagtcaaaaacagtttcttttta 28626890  T
Q  111 tggtaataattctcttttatggtatgcttaaccagt 146  Q
    || ||||||||| |||||||||||||||||| ||||    
T  28626891 tgataataattcccttttatggtatgcttaatcagt 28626926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 174
Target Start/End: Complemental strand, 9063218 - 9063052
Alignment:
Q  8 cccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctt 107  Q
    ||||| |||| |||||| | ||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||| || ||||  | ||| |||    
T  9063218 cccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaatcgtgcaattaatttataataaagtcaaaaacaattttctt 9063119  T
Q  108 ttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||| ||||| || |||||||||||||| ||||    |||||||||||||||||||    
T  9063118 ttatggtaataattcccttttgtgatatgcttaaccagtgccccggaagcaccggttagcaggaccc 9063052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 9537979 - 9537823
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||  | ||||  |||||| |||||| ||||||    
T  9537979 ggttaaggatatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttataataaattcaaaaggagtttctttttatagtaata 9537880  T
Q  119 attctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||  |||||||||||||||||||||||  |||   | |||||||||||||||||||    
T  9537879 atttccttttatggtatgcttaaccagtgtcccggagacaccggttagcaggaccca 9537823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 32113939 - 32114095
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagttt-ccttttatggtaat 117  Q
    |||||| | ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||  ||||| ||||||||| ||||    
T  32113939 ggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtttaattaatttataataaagtaaaaaacagtttcccttttatgataat 32114038  T
Q  118 aattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||| ||||||| ||||| ||||||||| | |||  | ||||||||||||||||||    
T  32114039 aattcccttttatagtatgtttaaccagtgctccagagccaccggttagcaggaccc 32114095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 13 - 175
Target Start/End: Original strand, 40831302 - 40831464
Alignment:
Q  13 ggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatg 112  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||  | ||| ||||||||    
T  40831302 ggcactggttaaagatatgaaaaagaaaattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaaacaattttcttttatg 40831401  T
Q  113 gtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    ||||||||| |||||||| |||||| ||| | ||||||    | |||||||||||||||||||    
T  40831402 gtaataattttcttttatagtatgcataatctgtaccctggagacaccggttagcaggaccca 40831464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 174
Target Start/End: Complemental strand, 3930379 - 3930233
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||| ||||||||||||||||||||||| |||||| |||||||||||||| ||||||| || ||||  ||||||||||| || ||||||||  ||||    
T  3930379 tatgaaagaggaaattatatagtagttaatgcattgaagttgtgtaattaattgataataaagtcaaaaacagtttccttttttgataataatttccttt 3930280  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||| |||||||||||||| ||||| | ||| || ||||||||||||    
T  3930279 tatgatatgcttaaccagtgccccaggagcatcgattagcaggaccc 3930233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 37373236 - 37373360
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||| ||  |||  ||||| ||||||||||||||    
T  37373236 ggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaattgataataaagtcgaaaacagttttcttttatggtaata 37373335  T
Q  119 attctcttttatggtatgcttaacc 143  Q
    |||| |||| |||||||||||||||    
T  37373336 attccctttcatggtatgcttaacc 37373360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 53 - 177
Target Start/End: Complemental strand, 24843400 - 24843277
Alignment:
Q  53 ttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatggtatgcttaaccagtacccca 152  Q
    ||||| |||||||||||||||||||||||||||||| || ||||| ||||||||||||||  ||||||||||||||||||||||||||| |||||   |     
T  24843400 ttaatctattgaaattgtgtaattaatttataataaagtcaaaatcagtttccttttatgacaataattctcttttatggtatgcttaatcagta-ttcg 24843302  T
Q  153 agggcaccggttagcaggacccaaa 177  Q
     | ||||||||||||||||||||||    
T  24843301 ggagcaccggttagcaggacccaaa 24843277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 172
Target Start/End: Original strand, 39406905 - 39407024
Alignment:
Q  51 agttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatggtatgcttaaccagtaccc 150  Q
    ||||||||  || ||||||||||||||||||||||||| || ||||  |||||||||||||| ||||||||| ||||||||||||| ||||| ||| |||    
T  39406905 agttaatgcgttaaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgtttaactagtgccc 39407004  T
Q  151 caagggcaccggttagcaggac 172  Q
    |  |||||||||||||||||||    
T  39407005 c--gggcaccggttagcaggac 39407024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 10870383 - 10870495
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | ||| |||||| |||||||||| ||||||||  |||||||||||||||||||||||||||||  | ||||  ||||||||||||||||||||    
T  10870383 ggttaatgatataaaaaagaaaattatataatagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaata 10870482  T
Q  119 attctcttttatg 131  Q
    |||| ||||||||    
T  10870483 attcccttttatg 10870495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 175
Target Start/End: Original strand, 29235279 - 29235422
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    ||||| ||||||||||||||||||||| ||| || ||||||||||||||||||||||  | |||| ||| ||||||||||| ||||||||  |||||||     
T  29235279 aaaaaagaaattatatagtagttaatgcattaaatttgtgtaattaatttataataaaatcaaaaataggttccttttatgataataatttccttttata 29235378  T
Q  132 gtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    | |||||||||||||  |||  |  |||||||||||| ||||||    
T  29235379 ggatgcttaaccagtgtcccgggaacaccggttagcatgaccca 29235422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 9278244 - 9278312
Alignment:
Q  20 gttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 88  Q
    ||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  9278244 gttaaagatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataataa 9278312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 34192815 - 34192902
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggta 115  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| || |||| || |||  ||||||||||    
T  34192815 tatgaaaaaggaaattatatactagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaataattttattttatggta 34192902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 42433685 - 42433583
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||| || || ||||  ||||| |||||||||||||||||  ||||| ||    
T  42433685 aaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataa-aaagtcaaaaacagttttcttttatggtaataatttccttttttg 42433587  T
Q  132 gtat 135  Q
    ||||    
T  42433586 gtat 42433583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 22451835 - 22451916
Alignment:
Q  39 aaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataatt 121  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||| || || |||| ||| ||||||||||||||||||||    
T  22451835 aaattatatagcagttaatgcattgaaattgtgtaattaatttataa-aaagtcaaaaatagcttccttttatggtaataatt 22451916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 174
Target Start/End: Original strand, 22956730 - 22956892
Alignment:
Q  12 gggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttat 111  Q
    |||||| ||||||  |||| ||||||||| | |||| |||||||||  ||| ||||| |||||||||||||||||||||| ||||  |||||||||||||    
T  22956730 gggcactggttaagagtataaaaaaggaa-tcatatggtagttaatacattaaaattatgtaattaatttataataatgtcaaaaacagtttccttttat 22956828  T
Q  112 ggtaataatt--ctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||| ||||  || |||||||||||| ||||  ||| ||| || | ||||||||| ||||||||    
T  22956829 ggtaaaaattcccttttttatggtatgtttaataagtgcccgaa-gacaccggttaacaggaccc 22956892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 10618042 - 10618118
Alignment:
Q  12 gggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 88  Q
    |||||| |||||| | |||||||||| |||||||||||||||||||| | | ||||||||||||||||| |||||||    
T  10618042 gggcacaggttaaggatatgaaaaagaaaattatatagtagttaatgcaattaaattgtgtaattaattgataataa 10618118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 17467643 - 17467703
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 88  Q
    ||||||||||||||||||  |||| |||||| ||||||||||||||||||||| |||||||    
T  17467643 tatgaaaaaggaaattatgcagtaattaatgcattgaaattgtgtaattaattgataataa 17467703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 12652643 - 12652707
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaa 65  Q
    ||||| ||| || |||| |||||| | ||||||||||||||||||||||||||||||| ||||||    
T  12652643 cggtgcccctggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaa 12652707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 30933453 - 30933410
Alignment:
Q  42 ttatatagtagttaatgtattgaaattgtgtaattaatttataa 85  Q
    |||||||||| |||||| ||||||||||||||||||||||||||    
T  30933453 ttatatagtaattaatgcattgaaattgtgtaattaatttataa 30933410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 16196947 - 16196893
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaa-ttgtgtaattaatttataa 85  Q
    |||||| |||||||||| |||||| | |||||||| |||||||||||||||||||    
T  16196947 aaaaagaaaattatataatagttattatattgaaaattgtgtaattaatttataa 16196893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 33124635 - 33124581
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattg-aaattgtgtaattaatttataa 85  Q
    ||||||||| |||||||||||||| || |||| |||||||||||| |||||||||    
T  33124635 aaaaaggaagttatatagtagttattgcattgaaaattgtgtaatcaatttataa 33124581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 43714260 - 43714188
Alignment:
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||| ||||   |||| | ||||||||||||||| ||||  || |||||||||||| |||||    
T  43714260 ttccttttatggtaaaaatttattttttttgtatgcttaaccagtgcccccgggacaccggttagcatgaccc 43714188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 7e-61; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 24438490 - 24438664
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| |||||||||||  ||||| |||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||| ||||  ||    
T  24438490 cggtgcccccggggcactagttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaattatgtaattaatttataataatgtcaaaaacag 24438589  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||    
T  24438590 tttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccca 24438664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 29993659 - 29993486
Alignment:
Q  2 ggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagt 101  Q
    |||| ||||||||||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||| | |    
T  29993659 ggtgcccccggggcaccggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaatcaat 29993560  T
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    ||||||||||||||||||||| |||||||||||||||||||||||  |||   |||| ||||||||||||||||    
T  29993559 ttccttttatggtaataattcccttttatggtatgcttaaccagtgtcccggaggcatcggttagcaggaccca 29993486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 34333297 - 34333469
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||  ||    
T  34333297 cggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaatttataataatgtcaaaa-cag 34333395  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||||||||||  |||||||||||| |||||| || ||||  |||||||||||||||||||||    
T  34333396 tttccttttatggtaataattcctttttatggtatgtttaacccgtgccccgggggcaccggttagcaggaccc 34333469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 5239306 - 5239472
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    |||| |||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  |||||| |||    
T  5239306 ccggagcactggttaatggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttctttt 5239405  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||||||||||||| |||||||||||||||||||  || ||||  |||||| |||||||||||||||    
T  5239406 tatggtaataattcccttttatggtatgcttaacttgtgcccccggggcactggttagcaggaccca 5239472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 12218609 - 12218437
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| || |||   ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  | |||| |||    
T  12218609 cggtgcccccggggcactggataagtatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaaataaaaaatag 12218510  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||  || ||||||||||||||||||    
T  12218509 tttccttttatggtaataattctcttttatggtatgtttaaccagtgcccc-gggacaccggttagcaggaccc 12218437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 28 - 177
Target Start/End: Complemental strand, 24798549 - 24798400
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  |||||||||||||||||||||||| ||||    
T  24798549 tatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttt 24798450  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaa 177  Q
    ||| ||||||||||||||| ||||  ||||||| ||||||||||||||||    
T  24798449 tatagtatgcttaaccagtgccccgggggcaccagttagcaggacccaaa 24798400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 8 - 174
Target Start/End: Original strand, 30810675 - 30810841
Alignment:
Q  8 cccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctt 107  Q
    |||||||||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||||| |||    
T  30810675 cccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttctt 30810774  T
Q  108 ttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||| |||||||||||||| ||||||| | ||||| ||| ||||||||| |||||||    
T  30810775 ttatggtaataattttcttttatggtatgtttaaccaatgccccaggggtaccggttagtaggaccc 30810841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 12 - 174
Target Start/End: Complemental strand, 42044455 - 42044294
Alignment:
Q  12 gggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttat 111  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||  ||||| |||||||    
T  42044455 gggcaccggttaaaggtatgaaaaaagaaattatatagtagttaatagattgaaattgtgtaattaatttataataatgtcaaaaacagttttcttttat 42044356  T
Q  112 ggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||| ||||||||||||| ||||||||| ||||  ||||||||||||||| |||||    
T  42044355 ggtaataattcccttttatggtatgtttaaccagtgcccc-ggggcaccggttagcatgaccc 42044294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 11 - 177
Target Start/End: Original strand, 4628589 - 4628755
Alignment:
Q  11 ggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctttta 110  Q
    ||||||| |||||| | ||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||| || | ||  ||||| ||||||    
T  4628589 ggggcaccggttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattgtttaattaatttataataaagtcagaaacagtttactttta 4628688  T
Q  111 tggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaa 177  Q
    |||||||||||| ||||||||||||||||||||||| ||  | ||||||||||||||||||||||||    
T  4628689 tggtaataattcccttttatggtatgcttaaccagtgccttaggggcaccggttagcaggacccaaa 4628755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 34606282 - 34606447
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||| |||||| | |||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||| || ||||  ||||||||||    
T  34606282 ccggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgaaattaatttataataaagtcaaaagcagtttccttt 34606381  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||  |||||||||||||||||||| || ||||  | |||||||||||||||||||    
T  34606382 tatggtaataattaccttttatggtatgcttaacccgtgccccgggagcaccggttagcaggaccc 34606447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 18485974 - 18486143
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| | |||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||  ||    
T  18485974 cggtgcccccggggcactggttaaggatattgaaaaggaaattatatagtaattaatgtattgaaattgtgtaattaatttataataaagttaaaaacag 18486073  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcagg 170  Q
    |||||||||||||||||||||   ||||||||||||||||||| || |||| | | ||||||||||||||    
T  18486074 tttccttttatggtaataatttcattttatggtatgcttaacccgtgccccgaagacaccggttagcagg 18486143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 45045801 - 45045933
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| ||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||  |||||||||||||| |||||    
T  45045801 ggttaagggtatgaaaaatgaaattatatagtaattaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatgataata 45045900  T
Q  119 attctcttttatggtatgcttaaccagtacccc 151  Q
    |||| ||||||||||||||||||||||| ||||    
T  45045901 attcccttttatggtatgcttaaccagtgcccc 45045933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 525230 - 525069
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||||| |||||||||| ||| |||| ||||||||||| ||||||||||| |||||||||||||||||  | ||||  ||||||||||||||||||||    
T  525230 ggttaaagatatgaaaaagaaaagtatacagtagttaatgcattgaaattgtataattaatttataataaaatcaaaaacagtttccttttatggtaata 525131  T
Q  119 attctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaataaa 181  Q
    ||||||||||||| |||| ||||||||||| ||  | ||||||||||||||||||||||||||    
T  525130 attctcttttatgatatgtttaaccagtactcc-ggagcaccggttagcaggacccaaataaa 525069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 13065032 - 13064876
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaatt-agtttccttttatggtaat 117  Q
    |||||| | ||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||| || ||||   |||||||||||||||||||    
T  13065032 ggttaaggatatgaaaaaggaaattatataatatttaatgtattgaatttgtgtaattaatttataataaagtcaaaaaacagtttccttttatggtaat 13064933  T
Q  118 aattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||| ||||||||||||||||||||||| | | | |||||||||||||||| ||||    
T  13064932 aattcccttttatggtatgcttaaccagtgctctaggggcaccggttagcagaaccc 13064876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 174
Target Start/End: Complemental strand, 23363310 - 23363167
Alignment:
Q  31 gaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttat 130  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| || ||||  |||||||||||||||||||| |||||||||||    
T  23363310 gaaaaaggaaattgtatagtagttaatgcattgaaattgtgtaattaatttataataaagttaaaaacagtttccttttatggtaatatttctcttttat 23363211  T
Q  131 ggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||| ||||||||| |||| |   ||||| ||||||||||||    
T  23363210 ggtatgtttaaccagtgccccgaaaacaccgattagcaggaccc 23363167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 28587940 - 28588106
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||  | ||| ||||||||||||||    
T  28587940 ggttaaggatatgaaaaaggaaattatatagtagtcaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaata 28588039  T
Q  119 attctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaataaatata 185  Q
    |||| ||||||||||||| ||||||| ||||||  |  || ||||||||||||| || ||| |||||    
T  28588040 attcccttttatggtatgtttaaccaataccccgggaacatcggttagcaggactcatatatatata 28588106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 43594209 - 43594064
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||||||||||  ||| |||||| | ||| ||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||| || ||||  ||    
T  43594209 cggtgtccccggaacactggttaaggatataaaaaaggaaattatataatagttaatgcattgaaattgtataattaatttataataaagtcaaaaacag 43594110  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagt 146  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||    
T  43594109 tttcctcttatgataataattctcttttatggtatgcttaaccagt 43594064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 5729359 - 5729531
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    |||||| ||||| |||| |||||| | ||||||||||||||||||||| ||||||||||||||||||  ||||||||||| ||||||| || |||| ||     
T  5729359 cggtgttcccggagcactggttaaggatatgaaaaaggaaattatataatagttaatgtattgaaataatgtaattaattgataataaagtcaaaaataa 5729458  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacc 173  Q
    ||| ||||||| |||||||||||||||||||| ||||||||||||| || |   ||||| |||||||||||||    
T  5729459 ttttcttttatagtaataattctcttttatggcatgcttaaccagtgcctcggaggcacaggttagcaggacc 5729531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 8754745 - 8754608
Alignment:
Q  14 gcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatgg 113  Q
    |||| |||||| | ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  |||||  ||||||||    
T  8754745 gcactggttaaggatatgaaaaatgaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttgttttatgg 8754646  T
Q  114 taataattctcttttatggtatgcttaaccagtacccc 151  Q
    ||||||||  ||||||||||||||||||| ||||||||    
T  8754645 taataatttccttttatggtatgcttaactagtacccc 8754608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 11686479 - 11686324
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag--tttccttttatggtaa 116  Q
    |||||| | ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||  |||  |||||||||||    
T  11686479 ggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttttttttttatggtaa 11686380  T
Q  117 taattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacc 173  Q
    ||||||||||||||| ||||||||||| ||||||  | |||||||||||||||||||    
T  11686379 taattctcttttatgatatgcttaacctgtacccgga-ggcaccggttagcaggacc 11686324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 47083086 - 47083211
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||  ||||||||||||||||||||    
T  47083086 ggttaaggatatgaaaaaagaaattatatagtagttaatgtattgaaattgtgtaattaattgataataaagttaaaaacagtttccttttatggtaata 47083185  T
Q  119 attctcttttatggtatgcttaacca 144  Q
    |||| |||||||| |||| |||||||    
T  47083186 attcccttttatgatatgtttaacca 47083211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 47839512 - 47839655
Alignment:
Q  8 cccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctt 107  Q
    ||||||| || |||||| | ||||||||||||| ||||||| ||||||||  ||||||||||||||||||||||||||||| || ||||  |||||||||    
T  47839512 cccggggtactggttaaggatatgaaaaaggaatttatataatagttaatacattgaaattgtgtaattaatttataataaagtcaaaaacagtttcctt 47839611  T
Q  108 ttatggtaataattctcttttatggtatgcttaaccagtacccc 151  Q
    ||||||||||||||| |||||||||||||  |||||||| ||||    
T  47839612 ttatggtaataattcccttttatggtatgaataaccagtgcccc 47839655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 47657003 - 47657136
Alignment:
Q  11 ggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctttta 110  Q
    ||||||| |||||| | |||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||| || ||||  |||||  |||||    
T  47657003 ggggcactggttaaggatatgaaaaagaaaattatatagtaattaatgcattgaaattgtgtaattaatttataataaagttaaaagcagttt--tttta 47657100  T
Q  111 tggtaataattctcttttatggtatgcttaaccagt 146  Q
    |||||||||||| |||||||||||||||||| ||||    
T  47657101 tggtaataattcccttttatggtatgcttaatcagt 47657136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 7689342 - 7689228
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    |||||||||||| || |||| |||||| ||||||||||||||||||||||||||||| || ||||  ||||| |||||||||||||||||||||||||||    
T  7689342 aaaaaggaaattttacagtaattaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaataattctcttttatg 7689243  T
Q  132 gtatgcttaaccagt 146  Q
    |||| ||||||||||    
T  7689242 gtatacttaaccagt 7689228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 18117183 - 18117301
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||  |||||  |||||| |||||||||   |||    
T  18117183 tatgaaagaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttttttttatagtaataatttcattt 18117282  T
Q  128 tatggtatgcttaaccagt 146  Q
    |||||||||||||||||||    
T  18117283 tatggtatgcttaaccagt 18117301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 33636492 - 33636610
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    |||||||||| |||||||||| || |||||  ||||||||||||||||||||||||||||| || |||| ||||||  |||||||||||||||||| |||    
T  33636492 tatgaaaaagaaaattatataataattaattcattgaaattgtgtaattaatttataataaagtaaaaaatagtttatttttatggtaataattctattt 33636591  T
Q  128 tatggtatgcttaaccagt 146  Q
    |||||||||||||||||||    
T  33636592 tatggtatgcttaaccagt 33636610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 46716669 - 46716793
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||||| ||| ||||||||||||||||| || |||||| | ||||||| ||||||||||||||||||| || |||| || |||||||||||| |||||    
T  46716669 ggttaaagatataaaaaaggaaattatataatacttaatgcactgaaattatgtaattaatttataataaagtcaaaaatattttccttttatgataata 46716768  T
Q  119 attctcttttatggtatgcttaacc 143  Q
    |||| ||||||||||||| ||||||    
T  46716769 attcccttttatggtatgtttaacc 46716793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 1737003 - 1737160
Alignment:
Q  11 ggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctttta 110  Q
    ||||||| |||||| | ||||||||| ||||||||||| ||||||||| |||||||| |||||||||||| ||||||| || ||||  | ||||| ||||    
T  1737003 ggggcactggttaaggatatgaaaaatgaaattatataatagttaatgcattgaaatagtgtaattaattgataataaagttaaaaacattttccattta 1737102  T
Q  111 tggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcag 169  Q
    || |||||||||  |||||||||||||||||||||| ||||    ||||||||||||||    
T  1737103 tgataataattc-attttatggtatgcttaaccagtgccccggaagcaccggttagcag 1737160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 38 - 174
Target Start/End: Complemental strand, 37674240 - 37674106
Alignment:
Q  38 gaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatggtatgc 137  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||||| |||||||| ||  | || | |||||||||||||    
T  37674240 gaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatgatataattttttttttatggtatgc 37674141  T
Q  138 ttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||  ||   |||||||||||||||||||||    
T  37674140 ttaaccagtgtcc--ggggcaccggttagcaggaccc 37674106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 29835859 - 29835735
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag-tttccttttatggtaat 117  Q
    |||||||| ||||||||||||| ||||||| ||||||||||||| |||||| ||||||||||| |||||| || ||||  || |||  ||||||||||||    
T  29835859 ggttaaagatatgaaaaaggaagttatatactagttaatgtattaaaattgcgtaattaatttgtaataaagttaaaaacagttttttttttatggtaat 29835760  T
Q  118 aattctcttttatggtatgcttaac 142  Q
    |||||| ||||||||||||||||||    
T  29835759 aattctattttatggtatgcttaac 29835735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 28262052 - 28262182
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||| ||| |||||| | ||||||||||||||||||||||||||||     |||||||| ||||||||||| |||||||  | ||||  ||||||||||    
T  28262052 ccgggtcaccggttaaggatatgaaaaaggaaattatatagtagtta-----ttgaaattatgtaattaattgataataaaatcaaaaacagtttccttt 28262146  T
Q  109 tatggtaataattctcttttatggtatgcttaacca 144  Q
    ||| ||||||||||| ||||||||||||||||||||    
T  28262147 tatagtaataattcttttttatggtatgcttaacca 28262182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 112
Target Start/End: Complemental strand, 27456280 - 27456175
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    |||| |||||| |||||| | |||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||||||||    
T  27456280 cccccgggcactggttaaggatatggaaaaagaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaagcagtttcct 27456181  T
Q  107 tttatg 112  Q
    ||||||    
T  27456180 tttatg 27456175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 34546469 - 34546373
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggta 115  Q
    |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| || ||||  ||||| |||||||||||    
T  34546469 ggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttatagtaaagtcaaaaacagtttacttttatggta 34546373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 141
Target Start/End: Complemental strand, 18220812 - 18220704
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||  |||| |||||| ||||||||||||||| |  ||||| ||    
T  18220812 aaaaaggaaattatatagtaattaatgtatagaaattgtgtaattaatttataa-aatggcaaaaatagttttcttttatggtaataaattccttttttg 18220714  T
Q  132 gtatgcttaa 141  Q
    |||| |||||    
T  18220713 gtatccttaa 18220704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 175
Target Start/End: Original strand, 22739868 - 22740011
Alignment:
Q  33 aaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttat-aataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||| || ||  | ||||  ||||| ||||||||||||||||| | |||| |     
T  22739868 aaaaggaaagtatatagtagttaatgcattgaaattgtgtaattaatttataaaaaaaattaaaaacagttttcttttatggtaataattttattttttt 22739967  T
Q  132 gtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    ||||||||| | ||| || |  ||| ||||||||||| ||||||    
T  22739968 gtatgcttagctagtgcctccggggtaccggttagcatgaccca 22740011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 112
Target Start/End: Complemental strand, 37631707 - 37631604
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    |||||||||||||||| | ||| ||||||||||||||||| || |||||| ||| ||||| |||||||||||||||||||  | ||||  ||||||||||    
T  37631707 ccggggcacgggttaaggatataaaaaaggaaattatataataattaatgcattaaaattatgtaattaatttataataaaatcaaaaacagtttccttt 37631608  T
Q  109 tatg 112  Q
    ||||    
T  37631607 tatg 37631604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 23357853 - 23357733
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    |||||||||| ||||| |||||||||||||| |||  |   || |||||||||||||| || || ||||  ||||||| |||||| |||||||||||||     
T  23357853 tatgaaaaagaaaattgtatagtagttaatgcatttca---gtataattaatttataaaaaagtcaaaaacagtttccatttatgataataattctcttc 23357757  T
Q  128 tatggtatgcttaaccagtacccc 151  Q
    |||| |||||||||||||| ||||    
T  23357756 tatgatatgcttaaccagtgcccc 23357733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 4100684 - 4100612
Alignment:
Q  14 gcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 86  Q
    |||| |||||| | |||||||||||||||||||||||| |||||||||| ||||| ||| |||||||||||||    
T  4100684 gcaccggttaaggatatgaaaaaggaaattatatagtaattaatgtattaaaattatgttattaatttataat 4100612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 47118100 - 47118037
Alignment:
Q  63 gaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctctt 126  Q
    |||||||||||||||||||||||||| || || |  ||||||||||||||||||||||||||||    
T  47118100 gaaattgtgtaattaatttataataaagtcaagagcagtttccttttatggtaataattctctt 47118037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 4087667 - 4087720
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 85  Q
    ||||||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  4087667 aaaaaggaaattatatagtagttaatgcattgaaatagtgtgattaatttataa 4087720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 18220580 - 18220527
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 85  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  18220580 aaaaagaaaattatatagtaattaatgtattaaaattgtgtaattaatttataa 18220527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 18220673 - 18220624
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaattt 81  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  18220673 aaaaaggaaattatatagtaattactgtattgaaattgtgtaattaattt 18220624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 18470081 - 18469993
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataatt 121  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||||||| | || || ||||  |||| | ||||||||||||||||    
T  18470081 aaaaaggaaattatatagcagttaatacattgaaattgtgtaattaatttatga-aaagtcaaaaacagttacattttatggtaataatt 18469993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 36437421 - 36437507
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataa 119  Q
    ||||||| ||||||||||||| ||||  ||||||||||| |||||||||||||| || || |||| |||||| |||||||| ||||||    
T  36437421 aaaaaggtaattatatagtaggtaattcattgaaattgtttaattaatttataa-aaagtcaaaaatagttttcttttatgataataa 36437507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 3021935 - 3021988
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 85  Q
    ||||||||||||||||| ||||||||  ||||||||||| ||||||||||||||    
T  3021935 aaaaaggaaattatatactagttaatacattgaaattgtataattaatttataa 3021988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 5785509 - 5785563
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattg-aaattgtgtaattaatttataa 85  Q
    |||||||||||| ||||||| |||||||| || ||||||||||||||||||||||    
T  5785509 aaaaaggaaattttatagtaattaatgtagtgaaaattgtgtaattaatttataa 5785563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 38128406 - 38128478
Alignment:
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||| ||||  ||||| | ||||||||||||||| ||||   |||||||||||||| |||||    
T  38128406 ttccttttatggtaagaatttcctttttttgtatgcttaaccagtgccccggaggcaccggttagcatgaccc 38128478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 19434608 - 19434652
Alignment:
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagt 146  Q
    ||||||||||||||| |||| |||||| | |||||||||||||||    
T  19434608 ttccttttatggtaagaattttctttttttgtatgcttaaccagt 19434652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 22973619 - 22973667
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaat 57  Q
    ||||||||| |||||| | ||| ||||| ||||||||||||||||||||    
T  22973619 ccggggcactggttaatgatataaaaaaagaaattatatagtagttaat 22973667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 38022632 - 38022580
Alignment:
Q  34 aaaggaaattatatagtagttaatgtattg-aaattgtgtaattaatttataa 85  Q
    |||| ||||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  38022632 aaagaaaattatatagtagttattgtattgaaaattgtataattaatctataa 38022580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 7e-61; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 30486224 - 30486398
Alignment:
Q  2 ggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagt 101  Q
    |||| ||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| || ||||  |||    
T  30486224 ggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaaactataataaagtcaaaaacagt 30486323  T
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaa 176  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  30486324 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggacccaa 30486398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 561691 - 561520
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||    
T  561691 cggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaatcag 561592  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggac 172  Q
    |||||||||||  |||||||||||||||||||||||||||| |||||||||   ||||||||||||||||||    
T  561591 tttccttttataataataattctcttttatggtatgcttaatcagtaccccggaggcaccggttagcaggac 561520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 4381808 - 4381981
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| |||||| |||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||    
T  4381808 cggtgcccccggtgcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacag 4381907  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||||||||||  |||||||||||||||||||||| ||||  | |||| ||||||||||||||    
T  4381908 tttccttttatggtaataattccattttatggtatgcttaaccagtgccccgggagcactggttagcaggaccc 4381981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 27856569 - 27856396
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| ||||||  |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||  ||    
T  27856569 cggtgcccccggggcactggttaagagtatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacag 27856470  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||  ||||||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  27856469 tttccttttatggtaataatttccttttatggtatgcttaaccagtgccccgggggcatcggttagcaggaccc 27856396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 22567633 - 22567788
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| || ||||||||||||||||||    
T  22567633 ggttaaggatatgaaaaaagaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttccttttatggtaata 22567732  T
Q  119 attctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||||||||||||| || | ||| |||||||||||||||||||||    
T  22567733 attctcttttatggtatgcttaacccgtgctccaggggcaccggttagcaggaccc 22567788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 20552944 - 20553117
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||| ||||||| |||||| | |||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||| || ||||  ||    
T  20552944 cggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaattgataataaagtcaaaaacag 20553043  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  20553044 tttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 20553117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 8 - 174
Target Start/End: Original strand, 31438666 - 31438832
Alignment:
Q  8 cccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctt 107  Q
    |||||||||| |||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| || ||||  |||||||||    
T  31438666 cccggggcactggttaaggatatgaaaaaggaaattatacagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttcctt 31438765  T
Q  108 ttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||  || ||||||||||||||||||    
T  31438766 ttatgataataattcccttttatggtatgcttaaccagtgccccggggacaccggttagcaggaccc 31438832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 44587915 - 44588088
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| | ||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| || ||||  ||    
T  44587915 cggtgcccccggggcaccggttaaggatataaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataataaagtaaaaaacag 44588014  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||| ||||  ||| |||||||||||||||||    
T  44588015 tttccttttatggtaataattcccttttatggtatgcttaacaagtgccccgggggtaccggttagcaggaccc 44588088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 3668268 - 3668113
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  3668268 ggttaagggtatggaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaata 3668169  T
Q  119 attctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||  ||||||| ||||| ||||||||| |||| |||||||||||||||| |||||    
T  3668168 atttccttttatagtatgtttaaccagtgccccgagggcaccggttagcaagaccc 3668113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 6580212 - 6580382
Alignment:
Q  11 ggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctttta 110  Q
    ||||||| |||||| |||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||| ||||  ||||||||||||    
T  6580212 ggggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttcctttta 6580311  T
Q  111 tggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaataaatat 184  Q
    |||||||||||| ||||||||||||||||||||||| ||||  |||   |||||||||||||||| ||| ||||    
T  6580312 tggtaataattcccttttatggtatgcttaaccagtgccccggggg---cggttagcaggacccatatatatat 6580382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 31390033 - 31390199
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    |||||||||  ||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||  ||||||||||    
T  31390033 ccggggcactagttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattatgtaattaatttataataaagtcaaaaacagtttccttt 31390132  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||||||||||||| |||||||||||||||||||| || | ||  |||||||| |||||||||||||    
T  31390133 tatggtaataattcccttttatggtatgcttaacccgtgctccgggggcaccgattagcaggaccca 31390199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 22887771 - 22887937
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||  |||||| | ||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||| || ||||  ||||||||||    
T  22887771 ccggggcagtggttaaggatatgaaaaaagaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagttaaaaacagtttccttt 22887870  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||||||||||||||||||||||||||||||||||||| | ||  |||||||| |||||| ||||||    
T  22887871 tatggtaataattctcttttatggtatgcttaaccagtgctccgggggcaccgattagcatgaccca 22887937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 22068486 - 22068320
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    ||||||||||| |||||| | ||||||||||| |||||||||||||||| || ||||||||||| ||||||||| ||||||| || ||||  ||||||||    
T  22068486 ccccggggcactggttaaggatatgaaaaagggaattatatagtagtta-tgcattgaaattgtataattaattgataataaagtcaaaaacagtttcct 22068388  T
Q  107 tttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||  |||||||| ||||||||||||    
T  22068387 tttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccgattagcaggaccc 22068320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 32860115 - 32860259
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||| |||||||||||||| | ||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| || ||||  ||    
T  32860115 cggtgccccgggggcacgggttaaggatataaaaaaggaaattatatagtatttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacag 32860214  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagt 146  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  32860215 tttccttttat-gtaataattctcttttatggtatgcttaaccagt 32860259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 38591047 - 38590883
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||||||| ||||||| ||||||   ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||| || ||||  ||    
T  38591047 cggtgtccctggggcactggttaagaatatgaaaaaggaaattatacagtagttaatgtattaaaattgtgtaattaattgataataaagtcaaaaacag 38590948  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttag 166  Q
    ||| |||||||||||||||||| ||||||||||||||||||||| |||||| | ||||||||||||    
T  38590947 ttttcttttatggtaataattcccttttatggtatgcttaaccaataccccga-ggcaccggttag 38590883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 32361042 - 32360867
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| | | |||||||| |||||||||| ||||||||| ||||||||  | ||||||||| ||||||| || ||||  ||    
T  32361042 cggtgcccccggggcactggttaaggatgtgaaaaagaaaattatataatagttaatgcattgaaataatataattaattgataataaagtcaaaaacag 32360943  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaa 176  Q
    |||||||||||||||||||||| ||||||||||||||||||||| | ||||  |||||||||||||||||||||||    
T  32360942 tttccttttatggtaataattcccttttatggtatgcttaaccaatgccccgggggcaccggttagcaggacccaa 32360867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 34442699 - 34442533
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    |||||||||||  ||||| | |||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||||| ||    
T  34442699 ccccggggcacatgttaaggatatgaaaaagaagattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttct 34442600  T
Q  107 tttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||| |||||||||||||||||||||||  |||  ||||| |||||||||||||||    
T  34442599 tttatggtaataattcccttttatggtatgcttaaccagt-gcccgggggcatcggttagcaggaccc 34442533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 28 - 174
Target Start/End: Complemental strand, 26387210 - 26387064
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  | ||| |||||||||||||||||| ||||    
T  26387210 tatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataattcccttt 26387111  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||||||| ||    |||||||||||| ||||||||    
T  26387110 tatggtatgcttaaccagtgccttgggggcaccggttaacaggaccc 26387064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 28 - 174
Target Start/End: Complemental strand, 8969553 - 8969407
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    |||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||| || ||||  |||||||||||||||||||||||  ||||    
T  8969553 tatgaaaaagaaaattatatagtagttaatgcattgaaatagtgtaattaatttataataaagtcaaaagcagtttccttttatggtaataatttccttt 8969454  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||| ||||||||||| ||| ||||  |||||||||||||||| ||||    
T  8969453 tatagtatgcttaactagtgcccctggggcaccggttagcagtaccc 8969407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 1859176 - 1859342
Alignment:
Q  2 ggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagt 101  Q
    |||| |||||||| |  |||||| | ||| ||||| |||||| |||||||||||||| ||||||||| ||||||||||||||||||| || ||||  |||    
T  1859176 ggtgcccccggggtaatggttaaggatataaaaaaagaaattgtatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagt 1859275  T
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagca 168  Q
    || |||||||||||||||||||||||||||||||||||||||||| ||| | |  ||||||||||||    
T  1859276 tttcttttatggtaataattctcttttatggtatgcttaaccagtgccctaggaacaccggttagca 1859342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 35851914 - 35851750
Alignment:
Q  11 ggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctttta 110  Q
    ||||||| |||||| | | ||||||||||||||||||| ||||||||| ||||||||  ||||||||||| ||||||| || ||||  |||||| |||||    
T  35851914 ggggcaccggttaaggatgtgaaaaaggaaattatataatagttaatgcattgaaataatgtaattaattgataataaagtcaaaaacagtttcatttta 35851815  T
Q  111 tggtaataattctcttttatggtatgcttaaccagtacc-ccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||||||||||||||| | || |   |||||||||||||||||||||    
T  35851814 tggtaataattctcttttatggtatgcttaaccaatgcctcggggggcaccggttagcaggaccc 35851750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 28600990 - 28601152
Alignment:
Q  11 ggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctttta 110  Q
    ||||||| |||||| | ||||||||||| ||||||| |||||||| || ||||||||||| ||||||||| ||||||| || ||||  |||||| |||||    
T  28600990 ggggcactggttaaggatatgaaaaagggaattataaagtagtta-tgcattgaaattgtataattaattgataataaagttaaaaacagtttcttttta 28601088  T
Q  111 tggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||||||||||||||||| | |   | |||||||||||||||||||    
T  28601089 tggtaataattctcttttatggtatgcttaaccagtgcactgggagcaccggttagcaggaccc 28601152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 2898102 - 2898256
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||||| ||| |||  |||||    
T  2898102 ggttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttctatcataata 2898201  T
Q  119 attctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacc 173  Q
    |||||||||||||||||| |||| ||||  |||   |||||||||||||||||||    
T  2898202 attctcttttatggtatgtttaatcagtgtcccggaggcaccggttagcaggacc 2898256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 13574184 - 13574031
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | |||||||||||||| ||||||  | |||||||||||||||||||||||||||||||||||| || ||||  |||||| |||||||||||||    
T  13574184 ggttaaggatatgaaaaaggaaaatatataaaaattaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttctttttatggtaata 13574085  T
Q  119 attctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacc 173  Q
    |||  |||||||||||||||||||| || ||| || | |||||||||||||||||    
T  13574084 atttccttttatggtatgcttaacccgtgccctaa-gacaccggttagcaggacc 13574031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 27584769 - 27584896
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | |||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||  | ||||  ||||||||||||||||||||    
T  27584769 ggttaaggatatgaaaagggaaattatatagtagttaaagcattgaaattgtgtaattaatttataataaaatcaaaagcagtttccttttatggtaata 27584868  T
Q  119 attctcttttatggtatgcttaaccagt 146  Q
    |||||| || ||||||| ||||||||||    
T  27584869 attctcattcatggtatacttaaccagt 27584896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 174
Target Start/End: Complemental strand, 5093685 - 5093540
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||| || ||||  | |||||||||||| ||||||||  ||||    
T  5093685 tatgaaaaaggaaattaaatagtagttaatgcattaaaattgtgtaattaatttataataaagtcaaaagcaatttccttttatgataataatttccttt 5093586  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||| ||||| ||| ||||  |||||||||||| ||||||||    
T  5093585 tatggtatgtttaactagtgcccc-ggggcaccggttaacaggaccc 5093540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 28 - 173
Target Start/End: Complemental strand, 4022624 - 4022480
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||| || | ||  |||||||||||||| ||||||||  ||||    
T  4022624 tatgaaaaaagaaatta-atagtagttaatgtattgaaattctgtaattaatttataataaagtcagaaacagtttccttttatgataataatttccttt 4022526  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggacc 173  Q
    |||| |||| |||||||||  |||  ||||||||||||||||||||    
T  4022525 tatgatatgtttaaccagtgtcccgggggcaccggttagcaggacc 4022480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 5881237 - 5881374
Alignment:
Q  8 cccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtat----tgaaattgtgtaattaatttataataatgtgaaaattagttt 103  Q
    ||||| |||| |||||| | ||||||||||||||||||||||||||||||| ||    ||||||||||||||||||| ||||||| || ||||  |||||    
T  5881237 cccggagcacaggttaaggatatgaaaaaggaaattatatagtagttaatgcatgcattgaaattgtgtaattaattgataataaagtcaaaaagagttt 5881336  T
Q  104 ccttttatggtaataattctcttttatggtatgcttaa 141  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  5881337 ccttttatgataataattatcttttatggtatgcttaa 5881374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 38296200 - 38296317
Alignment:
Q  11 ggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcctttta 110  Q
    ||||||| |||||||| |||||||||| ||||||||||||| |||||  ||||||||||||||||||||||||||||| || ||||  |||||| |||||    
T  38296200 ggggcactggttaaagatatgaaaaagaaaattatatagtaattaatacattgaaattgtgtaattaatttataataaagtcaaaaacagtttcttttta 38296299  T
Q  111 tggtaataattctctttt 128  Q
    ||||||||||| ||||||    
T  38296300 tggtaataattttctttt 38296317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 11021375 - 11021259
Alignment:
Q  21 ttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataat 120  Q
    |||||| ||||||||| |||||||||| |||||||||| |||||||||||||||||||| |||||||| || ||||  ||||| ||||| ||||||||||    
T  11021375 ttaaagatatgaaaaaagaaattatatggtagttaatgcattgaaattgtgtaattaatatataataaagtcaaaaacagttttcttttgtggtaataat 11021276  T
Q  121 tctcttttatggtatgc 137  Q
    || ||||||||||||||    
T  11021275 tcccttttatggtatgc 11021259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 26891836 - 26891722
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||| ||| | |||| | ||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| || |||| |||    
T  26891836 cggtgcccccgggacactgattaaggatataaaaaaggaaattatatattagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaatag 26891737  T
Q  101 tttccttttatggta 115  Q
    |||||||||||||||    
T  26891736 tttccttttatggta 26891722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 168
Target Start/End: Original strand, 43637195 - 43637343
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||  | |||| |||||||||||||    
T  43637195 ggttaaggatatgaataaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaatttctttttatggtaata 43637294  T
Q  119 attctcttttatggtatgcttaaccagtaccccaagggcaccggttagca 168  Q
    |||  ||||||  ||||| |||||| || | ||  |||||||||||||||    
T  43637295 atttccttttacagtatgtttaacccgtgctcc-ggggcaccggttagca 43637343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 25782976 - 25782861
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    |||||||||||||||||||||||   ||||| |||||||||||||||||| |||||||||| || ||||  | ||| |||||||| ||||||||| ||||    
T  25782976 tatgaaaaaggaaattatatagt---taatgcattgaaattgtgtaattattttataataaagtcaaaaacaattttcttttatgataataattcccttt 25782880  T
Q  128 tatggtatgcttaaccagt 146  Q
    |||||||||||||||||||    
T  25782879 tatggtatgcttaaccagt 25782861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 175
Target Start/End: Original strand, 39531868 - 39532009
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |  || ||||  ||||| ||||||||||||| ||| ||||||  |    
T  39531868 aaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa-agagtcaaaaccagttttcttttatggtaat-attttctttttcg 39531965  T
Q  132 gtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
     ||||||||||||||  | ||  |||||||||||||| ||||||    
T  39531966 atatgcttaaccagtgtctcagaggcaccggttagcatgaccca 39532009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 15079100 - 15079012
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataatt 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||  | |||||||||||| ||||||||    
T  15079100 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa-aaagtcaaaaacaatttccttttatgataataatt 15079012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 25772150 - 25772270
Alignment:
Q  28 tatgaaaaaggaaattatatag-tagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctctt 126  Q
    ||||||||||||||||||| |  || |||||| | ||||||||||||||||||||||||||| || |||| || ||||| |||||| ||||||||| |||    
T  25772150 tatgaaaaaggaaattataaaaataattaatgcaatgaaattgtgtaattaatttataataaagtcaaaaataatttccctttatgataataattccctt 25772249  T
Q  127 ttatggtatgcttaaccagta 147  Q
    ||||||||| ||||| |||||    
T  25772250 ttatggtatacttaatcagta 25772270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 15146683 - 15146790
Alignment:
Q  39 aaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatggtatgct 138  Q
    |||||||||| ||||||||  ||||||||||| |||||||||||||| || || |||| || |||||||||||| |||||||| || ||| ||||||| |    
T  15146683 aaattatataatagttaatacattgaaattgtataattaatttataa-aaagtcaaaaataatttccttttatgataataattttcctttttggtatgtt 15146781  T
Q  139 taaccagta 147  Q
    |||||||||    
T  15146782 taaccagta 15146790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 144
Target Start/End: Complemental strand, 29102425 - 29102313
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    |||||| |||||||||||  ||||||  ||||||||| | ||||||||||||||||| || ||||  ||||| ||||||| ||||||||| |||||||||    
T  29102425 aaaaagaaaattatatagcggttaatacattgaaattttataattaatttataataaagtcaaaaacagttttcttttatagtaataattatcttttatg 29102326  T
Q  132 gtatgcttaacca 144  Q
     |||| |||||||    
T  29102325 atatgtttaacca 29102313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 142
Target Start/End: Complemental strand, 34123166 - 34123057
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    ||||| ||||||||||| |||||||||  ||||| ||||||||||||||||||| || || ||||  |||||||||||||||| |||||| |||||| |     
T  34123166 aaaaaagaaattatataatagttaatgctttgaatttgtgtaattaatttataa-aaagtcaaaaacagtttccttttatggtcataattttctttttta 34123068  T
Q  132 gtatgcttaac 142  Q
     ||||||||||    
T  34123067 atatgcttaac 34123057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 10820528 - 10820630
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    ||||| ||||||||| | ||||||||  ||||| ||||| |||||||||||||| || || ||||  ||||||||||||||||||||||| |||||| ||    
T  10820528 aaaaaagaaattataaaatagttaatacattgagattgt-taattaatttataaaaa-gttaaaaacagtttccttttatggtaataattttcttttttg 10820625  T
Q  132 gtatg 136  Q
    |||||    
T  10820626 gtatg 10820630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 53858 - 53685
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| |||| |||    
T  53858 cggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttatcataatgtcaaaaatag 53759  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||||| ||||||||||||| |||||| || ||||  ||||||||||||||| |||||    
T  53758 tttccttttatggtaataattcccttttatggtatgtttaacccgttccccgggggcaccggttagcaagaccc 53685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 68462 - 68288
Alignment:
Q  2 ggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagt 101  Q
    |||| ||||||||||| |||||| | ||||||||| ||||||||||||||||||||| ||| ||||||||||| ||| ||||||||| || ||||| |||    
T  68462 ggtgcccccggggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcattaaaattgtgtaaataaattataataaagttaaaatcagt 68363  T
Q  102 ttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaa 176  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||| | |||| |||||||||||||||||    
T  68362 ttccttttaaggtaataattcccttttatggtatgcttaaccagtaccccgaaggcatcggttagcaggacccaa 68288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 22974 - 23147
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| |||||| |||| |||||| | |||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||| || ||||  ||    
T  22974 cggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtaattaatacattgaaattgtgtaattaatttataataaagtcaaaaacag 23073  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| |||||||||||| |||||    
T  23074 tttccttttatgttaataattctcttttatggtatgtttaaccagtgccccaaggacaccggttagcaagaccc 23147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 14909 - 15083
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||||||||||||||| |||||||| ||| ||||| ||||||||||||||||||||| | |||||||||||| |||||||||||||| || ||||  ||    
T  14909 cggtgtccccggggcactggttaaagatataaaaaaagaaattatatagtagttaatgcactgaaattgtgtagttaatttataataaagtcaaaaacag 15008  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||   ||||| ||||| |||||||||    
T  15009 tttccttttatggtaataattcccttttatggtatgcttaaccagtgccccggaggcactggttaacaggaccca 15083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 865 - 1004
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||| | ||||||||||| |||||||||||||||    
T  865 tatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaatcaatttccttttatagtaataattctcttt 964  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagc 167  Q
    ||||||||||||||||||| ||| |||| |||||||||||    
T  965 tatggtatgcttaaccagtgccctaaggacaccggttagc 1004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 116217 - 116390
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| || | ||  ||    
T  116217 cggtgcccccggggcacaggttaaagatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacag 116316  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||| ||||||||| ||||||||||||| |||||| || ||||| ||  |||||||||||| ||||    
T  116317 tttccttttatgataataattcccttttatggtatgtttaacccgtgccccagggataccggttagcagtaccc 116390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 691 - 865
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| |||| | ||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| || ||||   |    
T  691 cggtgcccccagagcacgggttaaagatatgaaaaaggaaattatatagtagttaatccattgaaattgtgtaattaatttataataaagtcaaaaactg 790  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaa 176  Q
    ||| |||||||||| ||||||||||||||||||||||||||| | || |||  ||||||||||||| |||||||||    
T  791 ttttcttttatggtgataattctcttttatggtatgcttaactaatagccc-ggggcaccggttagtaggacccaa 865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 6283 - 6110
Alignment:
Q  1 cggtgtccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattag 100  Q
    ||||| ||| ||||||| |||||| | |||||||||||||| |||||||||||||||| |||| |||||||||||||| ||||||||| || ||||  ||    
T  6283 cggtgcccctggggcactggttaaggatatgaaaaaggaaactatatagtagttaatgcattggaattgtgtaattaaattataataaagtcaaaaacag 6184  T
Q  101 tttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||||||||| | ||||||||||||| |||||| || ||||  |||||||||||||||||||||    
T  6183 tttccttttatggtaataatccccttttatggtatgtttaacccgtgccccgggggcaccggttagcaggaccc 6110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 50569 - 50706
Alignment:
Q  9 ccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttt 108  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| || ||||| | ||| ||||    
T  50569 ccggggcactggttaaagatatgaaaaaggaaattatatagtagttaatgttttgaaattgtataattaatttataataaagtcaaaatcaattttcttt 50668  T
Q  109 tatggtaataattctcttttatggtatgcttaaccagt 146  Q
    |||| ||||||||||||||||| ||||| |||||||||    
T  50669 tatgataataattctcttttatagtatgtttaaccagt 50706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 53501 - 53349
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaata 118  Q
    |||||| | ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||  | ||           |||||    
T  53501 ggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaaacaatt-----------taata 53413  T
Q  119 attctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggacccaaataaat 182  Q
    |||||||||||||||||||||||| ||| ||||   ||||||||||||||||||| ||| ||||    
T  53412 attctcttttatggtatgcttaactagtgccccggaggcaccggttagcaggaccgaaacaaat 53349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 49 - 175
Target Start/End: Original strand, 10771 - 10897
Alignment:
Q  49 gtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatggtatgcttaaccagtac 148  Q
    |||||||||| ||||||||||||||||||||||||||||| || ||||  |||||||||||||||||||||||| | ||||||||||||||||||||| |    
T  10771 gtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccatttatggtatgcttaaccagtgc 10870  T
Q  149 cccaagggcaccggttagcaggaccca 175  Q
    | |  ||||| ||||||||||||||||    
T  10871 ctcgggggcagcggttagcaggaccca 10897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 25747 - 25904
Alignment:
Q  16 acgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggta 115  Q
    ||||||||| | ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| || ||||  | ||| |||||||||||    
T  25747 acgggttaaggatatgaaaaaggaa-ttatatagtaattaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggta 25845  T
Q  116 ataattctcttttatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||| |||||||||||| ||||| ||||  ||| | ||||| |||||| |||||||    
T  25846 ataattcccttttatggtatccttaaacagtgacccgaaggcacaggttagtaggaccc 25904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 28 - 174
Target Start/End: Complemental strand, 95730 - 95585
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||||||||||||||| || |||||| ||||||||| ||||||||||||||||||| || ||||  ||||| |||||||||||||||||| ||||    
T  95730 tatgaaaaaggaaattatataataattaatgaattgaaattatgtaattaatttataataaagtcaaaa-cagttttcttttatggtaataattcccttt 95632  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||| |||||| ||| |||| |||| |||||||| |||||||    
T  95631 tatggtatgtttaaccggtatcccaggggctccggttaggaggaccc 95585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 311 - 451
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    |||| |||||| ||||||   |||||||||| |||||||||| ||||||||| |||||||||||||||| |||||||||||| || ||||  ||||||||    
T  311 ccccagggcactggttaagcatatgaaaaagaaaattatataatagttaatgcattgaaattgtgtaataaatttataataaagtcaaaaacagtttcct 410  T
Q  107 tttatggtaataattctcttttatggtatgcttaaccagta 147  Q
    | || |||||||||||||||||||| |||| |||| |||||    
T  411 tctacggtaataattctcttttatgatatgattaatcagta 451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 175
Target Start/End: Original strand, 40959 - 41106
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||| ||||||||||| ||||||||| ||||||||| ||||||||||||||||| | || ||||  |||||||||||||| ||||||||  ||||    
T  40959 tatgaaaaatgaaattatataatagttaatgcattgaaattatgtaattaatttataatgaagtcaaaaacagtttccttttatgataataatttccttt 41058  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggaccca 175  Q
    |||| ||||||||||||||  |||   | |||||||| ||||||||||    
T  41059 tatgatatgcttaaccagtgtcccggagacaccggttggcaggaccca 41106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 174
Target Start/End: Original strand, 69266 - 69411
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    |||||||||| |||||||||||||||||||  ||| ||||| ||||||||||||||||||| || ||||  |||||  ||||| |||||||||| |||||    
T  69266 tatgaaaaagtaaattatatagtagttaatacattaaaattatgtaattaatttataataaagtcaaaagcagtttttttttaaggtaataatt-tcttt 69364  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    ||||||||||||||||||| || |  | ||||||||||| |||||||    
T  69365 tatggtatgcttaaccagtgcctcgggagcaccggttagaaggaccc 69411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 142
Target Start/End: Complemental strand, 33823 - 33714
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatg 131  Q
    |||| |||||||||||| ||||||||  |||||||||||||||||||||||||| ||  | |||| |||||| |||||||| |||||||| ||| || ||    
T  33823 aaaatggaaattatataatagttaatacattgaaattgtgtaattaatttataa-aagataaaaaatagttttcttttatgctaataattttctcttttg 33725  T
Q  132 gtatgcttaac 142  Q
     ||||||||||    
T  33724 atatgcttaac 33714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 174
Target Start/End: Complemental strand, 147051 - 146906
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||| || ||||  ||||| || ||| ||||||||||   |||    
T  147051 tatgaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaattgataataaagtcaaaaacagttttctattacggtaataatttctttt 146952  T
Q  128 tatggtatgcttaaccagtaccccaagggcaccggttagcaggaccc 174  Q
    |||||||||||||| |||||  ||| | |||||||||||||| ||||    
T  146951 tatggtatgcttaatcagta-tccacgagcaccggttagcagaaccc 146906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 8064 - 7956
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    |||| |||||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| || | ||  ||||||||    
T  8064 cccccgggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttcct 7965  T
Q  107 tttatggta 115  Q
    |||||||||    
T  7964 tttatggta 7956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 7307 - 7415
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    |||| |||||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| || | ||  ||||||||    
T  7307 cccccgggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttcct 7406  T
Q  107 tttatggta 115  Q
    |||||||||    
T  7407 tttatggta 7415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 174
Target Start/End: Original strand, 233925 - 234039
Alignment:
Q  60 attgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttttatggtatgcttaaccagtaccccaagggcac 159  Q
    ||||||||||||||||||||||||||||| || ||||  ||||||||||||||  |||||||  ||||||||||||| |||||| |||| ||  ||||||    
T  233925 attgaaattgtgtaattaatttataataaagtcaaaagcagtttccttttatgaaaataatttccttttatggtatgtttaaccggtactccgggggcac 234024  T
Q  160 cggttagcaggaccc 174  Q
    |||||||||||||||    
T  234025 cggttagcaggaccc 234039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 143
Target Start/End: Complemental strand, 17616 - 17502
Alignment:
Q  28 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataattctcttt 127  Q
    |||||||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||| || ||||  ||||| |||||||| |||||||||  |||    
T  17616 tatgaaaaagaaaattatatagtagctaatgcattgaaattgtg-aattaatttataataaagtcaaaaacagttttcttttatgataataattcctttt 17518  T
Q  128 tatggtatgcttaacc 143  Q
    ||||||||| ||||||    
T  17517 tatggtatgtttaacc 17502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 19752 - 19613
Alignment:
Q  7 ccccggggcacgggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttcct 106  Q
    |||| ||||| |||||||   ||||||||| ||||||||||| || |||||| |||||||||||||||| |||||||||||| || ||||  ||||||||    
T  19752 ccccagggcatgggttaagcatatgaaaaaagaaattatataataattaatgcattgaaattgtgtaatgaatttataataaagtcaaaaacagtttcct 19653  T
Q  107 tttatggtaataattctcttttatggtatgcttaaccagt 146  Q
    |||| | ||||| |||||||||||| |||| |||| ||||    
T  19652 tttacgataatagttctcttttatgatatgattaatcagt 19613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 11125 - 11029
Alignment:
Q  19 ggttaaaggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggta 115  Q
    |||||| | ||||||||||||||||||||| ||||||||| |||||||||||||||||||  |||||||| || ||||  |||||| ||||||||||    
T  11125 ggttaaggatatgaaaaaggaaattatatattagttaatgcattgaaattgtgtaattaaactataataaagtcaaaaacagtttcattttatggta 11029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 5090 - 5136
Alignment:
Q  39 aaattatatagtagttaatgtattgaaattgtgtaattaatttataa 85  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  5090 aaattatatagtagttaatttattgaaattgtgtaattaatttataa 5136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 74627 - 74526
Alignment:
Q  21 ttaaaggtatgaaaaaggaaattatatagt-agttaatgtattgaaattgtgtaattaatttataataatgtgaaaattagtttccttttatggtaataa 119  Q
    |||||| |||||||||  |||||||||||| | |||||||| ||||||||| ||||||||| |||||||  | ||||  |  || |||||||||||||||    
T  74627 ttaaagatatgaaaaaaaaaattatatagtaaattaatgtagtgaaattgtataattaattgataataaattaaaaaacaaatttcttttatggtaataa 74528  T
Q  120 tt 121  Q
    ||    
T  74527 tt 74526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 1415 - 1462
Alignment:
Q  32 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaat 79  Q
    ||||| ||||||||||| |||||| || ||||||||||||||||||||    
T  1415 aaaaaagaaattatataatagttattgcattgaaattgtgtaattaat 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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