View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1271_high_73 (Length: 379)

Name: NF1271_high_73
Description: NF1271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1271_high_73
NF1271_high_73
[»] chr7 (3 HSPs)
chr7 (4-371)||(39954741-39955108)
chr7 (169-274)||(10575471-10575576)
chr7 (155-227)||(354475-354547)
[»] chr4 (3 HSPs)
chr4 (25-275)||(53328654-53328904)
chr4 (25-251)||(22898493-22898719)
chr4 (25-251)||(22950161-22950387)
[»] chr5 (1 HSPs)
chr5 (28-275)||(26358540-26358787)
[»] chr3 (7 HSPs)
chr3 (4-274)||(24919879-24920149)
chr3 (4-274)||(24981965-24982235)
chr3 (4-260)||(24923467-24923723)
chr3 (4-266)||(25084957-25085219)
chr3 (16-274)||(31825550-31825808)
chr3 (4-266)||(24497260-24497522)
chr3 (4-251)||(21584613-21584860)
[»] chr2 (1 HSPs)
chr2 (25-257)||(41027512-41027744)
[»] chr8 (1 HSPs)
chr8 (91-274)||(14261025-14261208)


Alignment Details
Target: chr7 (Bit Score: 352; Significance: 0; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 4 - 371
Target Start/End: Complemental strand, 39955108 - 39954741
Alignment:
Q  4 ggaggagcagagaggcacagaaaggttcttcgcgataacatccaaggcataaccaagcctgcgattcgtcgtcttgcaaggcgtggtggtgtgaagagaa 103  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39955108 ggaggagcaaagaggcacagaaaggttcttcgcgacaacatccaaggcataaccaagcctgcgattcgtcgtcttgcaaggcgtggtggtgtgaagagaa 39955009  T
Q  104 ttagcggtctcatctacgaagagactcgcggtgttctcaagatctttcttgagaatgtgattcgtgatgctgttacttacactgagcatgctaggaggaa 203  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39955008 tcagcggtctcatctacgaagagactcgcggtgttctcaagatctttcttgagaatgtgattcgtgatgctgttacttacactgagcatgctaggaggaa 39954909  T
Q  204 aactgttaccgccatggatgttgtgtatgctctcaagaggcagggaaggactctctacggtttcggtggttaaatttagggtttagtttgttctggtcga 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39954908 aactgttaccgccatggatgttgtgtatgctctcaagaggcagggaaggactctctacggtttcggtggttaaatttagggtttagtttgttctggtcga 39954809  T
Q  304 tttagttctaaatctggttaatataaatttagtagtcttagatctggttgaatgcttagttctgtggt 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39954808 tttagttctaaatctggttaatataaatttagtagtcttagatctggttgaatgcttagtcctgtggt 39954741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 274
Target Start/End: Original strand, 10575471 - 10575576
Alignment:
Q  169 gatgctgttacttacactgagcatgctaggaggaaaactgttaccgccatggatgttgtgtatgctctcaagaggcagggaaggactctctacggtttcg 268  Q
    |||||||||||||||||||||||||| |||||||||||||| || || ||||||||||| || || || ||||| || ||||| || ||||| |||||||    
T  10575471 gatgctgttacttacactgagcatgcgaggaggaaaactgtgactgctatggatgttgtttacgcgcttaagagacaaggaagaaccctctatggtttcg 10575570  T
Q  269 gtggtt 274  Q
    ||||||    
T  10575571 gtggtt 10575576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 354475 - 354547
Alignment:
Q  155 agaatgtgattcgtgatgctgttacttacactgagcatgctaggaggaaaactgttaccgccatggatgttgt 227  Q
    |||||| |||| |||||||||||||||||||||||||||| |||||||| ||| | || || |||||||||||    
T  354475 agaatgagatttgtgatgctgttacttacactgagcatgcaaggaggaagactctgactgctatggatgttgt 354547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 4e-63; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 25 - 275
Target Start/End: Original strand, 53328654 - 53328904
Alignment:
Q  25 aaggttcttcgcgataacatccaaggcataaccaagcctgcgattcgtcgtcttgcaaggcgtggtggtgtgaagagaattagcggtctcatctacgaag 124  Q
    |||||||| |||||||||||||| || || || |||||||||||||||||||| ||||| ||||||||||||||| | || || ||  | ||||| ||||    
T  53328654 aaggttctgcgcgataacatccagggaatcacaaagcctgcgattcgtcgtctcgcaagacgtggtggtgtgaagcgtatcagtggcttaatctatgaag 53328753  T
Q  125 agactcgcggtgttctcaagatctttcttgagaatgtgattcgtgatgctgttacttacactgagcatgctaggaggaaaactgttaccgccatggatgt 224  Q
    | ||||| || ||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||| |  | || |||||||| || ||||||||    
T  53328754 aaactcgtggcgttctcaagatctttcttgagaatgtgattcgtgatgctgtcacatacacagagcatgctcgccgtaagactgttactgcaatggatgt 53328853  T
Q  225 tgtgtatgctctcaagaggcagggaaggactctctacggtttcggtggtta 275  Q
    ||| || |||||||||||||||||||||||||| ||||||||||| |||||    
T  53328854 tgtttacgctctcaagaggcagggaaggactctttacggtttcgggggtta 53328904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 251
Target Start/End: Original strand, 22898493 - 22898719
Alignment:
Q  25 aaggttcttcgcgataacatccaaggcataaccaagcctgcgattcgtcgtcttgcaaggcgtggtggtgtgaagagaattagcggtctcatctacgaag 124  Q
    ||||| ||||| || |||||||| || ||||| ||||| |||||||||||||||||  |  | || || |||||| | || || ||| | || || || |    
T  22898493 aaggtgcttcgtgacaacatccagggaataacaaagccagcgattcgtcgtcttgctcgtagaggaggagtgaagcgtatcagtggtttgatttatgagg 22898592  T
Q  125 agactcgcggtgttctcaagatctttcttgagaatgtgattcgtgatgctgttacttacactgagcatgctaggaggaaaactgttaccgccatggatgt 224  Q
    |||| || || ||  | ||||| ||| | |||||||||||| | |||||||| |||||||||||||| ||||| ||||| || ||||| || ||||||||    
T  22898593 agacacgtggcgtgttgaagatatttttggagaatgtgattagagatgctgtgacttacactgagcacgctagaaggaagacggttactgctatggatgt 22898692  T
Q  225 tgtgtatgctctcaagaggcagggaag 251  Q
     || ||||| |||||||| ||||||||    
T  22898693 ggtttatgccctcaagagacagggaag 22898719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 251
Target Start/End: Original strand, 22950161 - 22950387
Alignment:
Q  25 aaggttcttcgcgataacatccaaggcataaccaagcctgcgattcgtcgtcttgcaaggcgtggtggtgtgaagagaattagcggtctcatctacgaag 124  Q
    ||||| ||||| || |||||||| || ||||| ||||| |||||||||||||||||  |  | || || |||||| | || || ||| | || || || |    
T  22950161 aaggtgcttcgtgacaacatccagggaataacaaagccagcgattcgtcgtcttgctcgtagaggaggagtgaagcgtatcagtggtttgatttatgagg 22950260  T
Q  125 agactcgcggtgttctcaagatctttcttgagaatgtgattcgtgatgctgttacttacactgagcatgctaggaggaaaactgttaccgccatggatgt 224  Q
    |||| || || ||  | ||||| ||| | |||||||||||| | |||||||| |||||||||||||| ||||| ||||| || ||||| || ||||||||    
T  22950261 agacacgtggcgtgttgaagatatttttggagaatgtgattagagatgctgtgacttacactgagcacgctagaaggaagacggttactgctatggatgt 22950360  T
Q  225 tgtgtatgctctcaagaggcagggaag 251  Q
     || ||||| |||||||| ||||||||    
T  22950361 ggtttatgccctcaagagacagggaag 22950387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 9e-52; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 28 - 275
Target Start/End: Complemental strand, 26358787 - 26358540
Alignment:
Q  28 gttcttcgcgataacatccaaggcataaccaagcctgcgattcgtcgtcttgcaaggcgtggtggtgtgaagagaattagcggtctcatctacgaagaga 127  Q
    |||||||| |||||||| || || || ||||| || |||||||||||||||||||||||||||||||| ||  | || || ||||| ||||| ||||| |    
T  26358787 gttcttcgagataacattcagggaattaccaaacccgcgattcgtcgtcttgcaaggcgtggtggtgtaaaacgtatcagtggtctgatctatgaagaaa 26358688  T
Q  128 ctcgcggtgttctcaagatctttcttgagaatgtgattcgtgatgctgttacttacactgagcatgctaggaggaaaactgttaccgccatggatgttgt 227  Q
    |||| |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||||| |  | ||||| ||||| || |||||||||||    
T  26358687 ctcgtggtgttctcaagatatttcttgagaatgttattcgtgatgctgtcacttacactgaacatgctcgtcgcaaaacagttactgctatggatgttgt 26358588  T
Q  228 gtatgctctcaagaggcagggaaggactctctacggtttcggtggtta 275  Q
     ||||| ||||||||||| |||||||| || || ||||| || |||||    
T  26358587 ttatgcgctcaagaggcaaggaaggaccctttatggttttgggggtta 26358540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 4 - 274
Target Start/End: Complemental strand, 24920149 - 24919879
Alignment:
Q  4 ggaggagcagagaggcacagaaaggttcttcgcgataacatccaaggcataaccaagcctgcgattcgtcgtcttgcaaggcgtggtggtgtgaagagaa 103  Q
    ||||| ||| ||||||| || || |||||||| ||||||||||| || || ||||||||||| ||||||||  | |||||  | ||||||||||||||||    
T  24920149 ggaggtgcaaagaggcataggaaagttcttcgtgataacatccagggtatcaccaagcctgcaattcgtcgattggcaagaagaggtggtgtgaagagaa 24920050  T
Q  104 ttagcggtctcatctacgaagagactcgcggtgttctcaagatctttcttgagaatgtgattcgtgatgctgttacttacactgagcatgctaggaggaa 203  Q
    | |||||| | ||||| ||||| ||  | |||||  | ||||||||  | |||||||| |||||||||||||| || ||||||||||| |||||||||||    
T  24920049 tcagcggtttgatctatgaagaaaccagaggtgtcttgaagatcttcttagagaatgtcattcgtgatgctgtgacatacactgagcacgctaggaggaa 24919950  T
Q  204 aactgttaccgccatggatgttgtgtatgctctcaagaggcagggaaggactctctacggtttcggtggtt 274  Q
     || || || ||||||||||| || |||||| | |||||||||||||| || ||||| || ||||| ||||    
T  24919949 gacagtgacagccatggatgtcgtctatgctttgaagaggcagggaagaaccctctatggattcggaggtt 24919879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 4 - 274
Target Start/End: Original strand, 24981965 - 24982235
Alignment:
Q  4 ggaggagcagagaggcacagaaaggttcttcgcgataacatccaaggcataaccaagcctgcgattcgtcgtcttgcaaggcgtggtggtgtgaagagaa 103  Q
    ||||| ||| ||||||| || || |||||||| ||||||||||| || || ||||||||||| ||||||||  | |||||  | |||||||| |||||||    
T  24981965 ggaggtgcaaagaggcataggaaagttcttcgtgataacatccagggtatcaccaagcctgctattcgtcgattggcaagaagaggtggtgttaagagaa 24982064  T
Q  104 ttagcggtctcatctacgaagagactcgcggtgttctcaagatctttcttgagaatgtgattcgtgatgctgttacttacactgagcatgctaggaggaa 203  Q
    | || ||| | || || ||||| ||  | |||||  | ||||||||  | |||||||| || |||||||| ||||| ||||||||||| |||||||||||    
T  24982065 tcagtggtttgatatatgaagaaaccagaggtgtcttgaagatcttcttggagaatgtcatccgtgatgcagttacatacactgagcacgctaggaggaa 24982164  T
Q  204 aactgttaccgccatggatgttgtgtatgctctcaagaggcagggaaggactctctacggtttcggtggtt 274  Q
     ||||||||||||||||||||||| |||||| | ||||| || ||||| || ||||| |||||||||||||    
T  24982165 gactgttaccgccatggatgttgtctatgctttgaagagacaaggaagaaccctctatggtttcggtggtt 24982235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 260
Target Start/End: Complemental strand, 24923723 - 24923467
Alignment:
Q  4 ggaggagcagagaggcacagaaaggttcttcgcgataacatccaaggcataaccaagcctgcgattcgtcgtcttgcaaggcgtggtggtgtgaagagaa 103  Q
    ||||| ||| ||||||| |||||||||||||| ||||||||||| || || ||||||||||| ||||||||  | |||||  | |||||||| |||||||    
T  24923723 ggaggtgcaaagaggcatagaaaggttcttcgtgataacatccagggtatcaccaagcctgctattcgtcgattggcaagaagaggtggtgttaagagaa 24923624  T
Q  104 ttagcggtctcatctacgaagagactcgcggtgttctcaagatctttcttgagaatgtgattcgtgatgctgttacttacactgagcatgctaggaggaa 203  Q
    | || ||| | ||||| ||||| ||  | |||||  | ||||||||  | |||||||| |||||||||||||| || ||||||||||| || ||||||||    
T  24923623 tcagtggtttgatctatgaagaaaccagaggtgtcttgaagatcttcttggagaatgtcattcgtgatgctgtgacatacactgagcacgcaaggaggaa 24923524  T
Q  204 aactgttaccgccatggatgttgtgtatgctctcaagaggcagggaaggactctcta 260  Q
     || || || |||||||||||||| |||||| | ||||| |||||||| || |||||    
T  24923523 gacagtgacagccatggatgttgtctatgctttgaagagacagggaagaaccctcta 24923467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 266
Target Start/End: Original strand, 25084957 - 25085219
Alignment:
Q  4 ggaggagcagagaggcacagaaaggttcttcgcgataacatccaaggcataaccaagcctgcgattcgtcgtcttgcaaggcgtggtggtgtgaagagaa 103  Q
    ||||| ||| ||||||| |||||||||||||| ||||||||||| || || ||||||||||| |||||| |  | || ||  | ||||||||||||||||    
T  25084957 ggaggtgcaaagaggcatagaaaggttcttcgtgataacatccagggtatcaccaagcctgccattcgtagattggcgagaagaggtggtgtgaagagaa 25085056  T
Q  104 ttagcggtctcatctacgaagagactcgcggtgttctcaagatctttcttgagaatgtgattcgtgatgctgttacttacactgagcatgctaggaggaa 203  Q
    | || ||| | || || ||||| ||  | |||||  | ||||||||  | ||||||||||| |||||||| ||||| ||||||||||| || ||||||||    
T  25085057 tcagtggtttgatatatgaagaaaccagaggtgtcttgaagatcttcttggagaatgtgatccgtgatgcagttacatacactgagcacgcaaggaggaa 25085156  T
Q  204 aactgttaccgccatggatgttgtgtatgctctcaagaggcagggaaggactctctacggttt 266  Q
     ||||| || |||||||||||||| |||||| | ||||| |||||||| || ||||| |||||    
T  25085157 gactgtgacagccatggatgttgtctatgctttgaagagacagggaagaaccctctatggttt 25085219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 274
Target Start/End: Complemental strand, 31825808 - 31825550
Alignment:
Q  16 aggcacagaaaggttcttcgcgataacatccaaggcataaccaagcctgcgattcgtcgtcttgcaaggcgtggtggtgtgaagagaattagcggtctca 115  Q
    ||||||||||| ||||| ||||| |||||||| || || || |||||||| ||||||||  | || ||  | |||||||||||||| || || ||| | |    
T  31825808 aggcacagaaaagttctccgcgacaacatccagggtatcactaagcctgccattcgtcgattggcgagaagaggtggtgtgaagaggatcagtggtttga 31825709  T
Q  116 tctacgaagagactcgcggtgttctcaagatctttcttgagaatgtgattcgtgatgctgttacttacactgagcatgctaggaggaaaactgttaccgc 215  Q
    |||| ||||| ||| | |||||  | ||||||||  | |||||||| || |||||||| || || ||||||||||| ||||||||||| || ||||||||    
T  31825708 tctatgaagaaactagaggtgtcttgaagatcttcttggagaatgtcatccgtgatgcggtcacatacactgagcacgctaggaggaagacagttaccgc 31825609  T
Q  216 catggatgttgtgtatgctctcaagaggcagggaaggactctctacggtttcggtggtt 274  Q
     ||||||||||| |||||| | |||||||||||||| || ||||| || ||||| ||||    
T  31825608 gatggatgttgtctatgctttgaagaggcagggaagaaccctctatggattcggaggtt 31825550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 266
Target Start/End: Complemental strand, 24497522 - 24497260
Alignment:
Q  4 ggaggagcagagaggcacagaaaggttcttcgcgataacatccaaggcataaccaagcctgcgattcgtcgtcttgcaaggcgtggtggtgtgaagagaa 103  Q
    ||||| ||| ||||||| || ||||||||||| || |||||||| || || ||||||||||| ||||||||  | |||||  | |||||||| |||||||    
T  24497522 ggaggtgcaaagaggcataggaaggttcttcgtgacaacatccagggtatcaccaagcctgctattcgtcgattggcaagaagaggtggtgttaagagaa 24497423  T
Q  104 ttagcggtctcatctacgaagagactcgcggtgttctcaagatctttcttgagaatgtgattcgtgatgctgttacttacactgagcatgctaggaggaa 203  Q
    | || ||  | ||||| ||||| ||  | |||||  | ||||||||  | || |||||||| |||||||| ||||| ||||||||||| || ||||||||    
T  24497422 tcagtggattgatctatgaagaaaccagaggtgtcttgaagatcttcttggaaaatgtgatccgtgatgcagttacatacactgagcacgcaaggaggaa 24497323  T
Q  204 aactgttaccgccatggatgttgtgtatgctctcaagaggcagggaaggactctctacggttt 266  Q
     ||||| || |||||||||||||| |||||| | ||||| || ||||| || ||||| |||||    
T  24497322 gactgtgacagccatggatgttgtctatgctttgaagagacaaggaagaaccctctatggttt 24497260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 251
Target Start/End: Complemental strand, 21584860 - 21584613
Alignment:
Q  4 ggaggagcagagaggcacagaaaggttcttcgcgataacatccaaggcataaccaagcctgcgattcgtcgtcttgcaaggcgtggtggtgtgaagagaa 103  Q
    ||||| ||| |||| ||||| || |||||||| |||||||| || || || |||||||| |||||||||||  | || ||  | |||||||| |||||||    
T  21584860 ggaggtgcaaagagacacaggaaagttcttcgtgataacattcagggaatcaccaagccagcgattcgtcgattggcgagaagaggtggtgttaagagaa 21584761  T
Q  104 ttagcggtctcatctacgaagagactcgcggtgttctcaagatctttcttg-agaatgtgattcgtgatgctgttacttacactgagcatgctaggagga 202  Q
    | || ||| | || || || || ||  | || ||||| ||||| ||||||| ||||||||||||||||||| ||||| |||||||||||||| |||||||    
T  21584760 tcagtggtttgatttatgaggaaacaagaggagttcttaagat-tttcttggagaatgtgattcgtgatgcggttacgtacactgagcatgcaaggagga 21584662  T
Q  203 aaactgttaccgccatggatgttgtgtatgctctcaagaggcagggaag 251  Q
    | ||||| || || ||||||||||| |||||| | |||||||| |||||    
T  21584661 agactgtgactgctatggatgttgtttatgctttgaagaggcaaggaag 21584613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 25 - 257
Target Start/End: Original strand, 41027512 - 41027744
Alignment:
Q  25 aaggttcttcgcgataacatccaaggcataaccaagcctgcgattcgtcgtcttgcaaggcgtggtggtgtgaagagaattagcggtctcatctacgaag 124  Q
    ||||| ||||| |||||||| ||||| || || |||||||||||||||||| | ||| |  | || || |||||| | || |||||| | ||||||||||    
T  41027512 aaggtgcttcgtgataacattcaaggaattacgaagcctgcgattcgtcgtttggcacgtagaggaggagtgaagcgtataagcggtttgatctacgaag 41027611  T
Q  125 agactcgcggtgttctcaagatctttcttgagaatgtgattcgtgatgctgttacttacactgagcatgctaggaggaaaactgttaccgccatggatgt 224  Q
    |||| || || ||  | ||||||||| | |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||||| || ||||||||    
T  41027612 agacacgtggcgtgttgaagatctttttggagaatgttattcgtgatgctgttacttacacagagcacgctaggagaaagactgttactgctatggatgt 41027711  T
Q  225 tgtgtatgctctcaagaggcagggaaggactct 257  Q
    ||| |||||  | ||||| || |||||||||||    
T  41027712 tgtttatgcattgaagagacaaggaaggactct 41027744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 274
Target Start/End: Complemental strand, 14261208 - 14261025
Alignment:
Q  91 ggtgtgaagagaattagcggtctcatctacgaagagactcgcggtgttctcaagatctttcttg-agaatgtgattcgtgatgctgttacttacactgag 189  Q
    |||||||||||||| |||||  | || || ||||| |||||||||||  | ||||| ||||||| ||||||||||  | ||||||||||| || |||||     
T  14261208 ggtgtgaagagaatcagcgggttgatttatgaagaaactcgcggtgtgttgaagat-tttcttggagaatgtgataagagatgctgttacgtatactgaa 14261110  T
Q  190 catgctaggaggaaaactgttaccgccatggatgttgtgtatgctctcaagaggcagggaaggactctctacggtttcggtggtt 274  Q
    ||||| |||||||| || ||||| || ||||||||||| |||||  | ||||| || ||||||||| | || |||||||| ||||    
T  14261109 catgcgaggaggaagacggttactgctatggatgttgtttatgcgttgaagagacaaggaaggactttgtatggtttcggaggtt 14261025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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