View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1271_low_118 (Length: 326)
Name: NF1271_low_118
Description: NF1271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1271_low_118 |
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Alignment Details
Target: chr8 (Bit Score: 181; Significance: 9e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 9848465 - 9848653
Alignment:
| Q |
53 |
ttattggcaatcacaatgaaagaggcgtaacagaatagggtctaattttcctagaaacaaagtataaaagaggcgtaatattcttcgttacaaagaaata |
152 |
Q |
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| T |
9848465 |
ttattggcaatcacaatgaaagaggtgtaacagaatagggtctaattttcctagaaacaaagtataaaagaggcgtaatattattcgttacaaagaaata |
9848564 |
T |
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| Q |
153 |
caatgtattctaaaatccaaatttctttatatttttctaaattgtaactttgcccatcgtttgtttcgttcacgtacagagtagcctga |
241 |
Q |
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| T |
9848565 |
caatgtattctaaaatccaaatttctttatatttttctaaattgtaactttgcccatcgtttgtttcgttcacgtacagagtagcctga |
9848653 |
T |
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