View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1271_low_135 (Length: 292)
Name: NF1271_low_135
Description: NF1271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1271_low_135 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 40 - 255
Target Start/End: Complemental strand, 37022910 - 37022695
Alignment:
| Q |
40 |
ctattacctccttagaatactcatcaagtatacaaggcttcaacttcatatttttaaacagtgttccaacaataacacattccttgccctcttccaatcc |
139 |
Q |
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| T |
37022910 |
ctattacctgcttagaatactcatcaagtatacaaggcttcaacttcatatttttaaacagtgttccaacaataacacattccttgccctcttccaatcc |
37022811 |
T |
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| Q |
140 |
caacaccgtgcatactgtaaataaataatttcaaacaattaatcaaaaattcaagcaattaagcaccataaatacacacaaaaaataggagatttaaagt |
239 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
37022810 |
caacaccgtgcatactgtaaataaataatttcaaacaattaatcaaaaattcaagcaattaaacaccataaatacacacaaaaaataggagatttaaagt |
37022711 |
T |
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| Q |
240 |
caaaaccctaaattga |
255 |
Q |
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|||||||||||||||| |
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| T |
37022710 |
caaaaccctaaattga |
37022695 |
T |
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