View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1271_low_139 (Length: 284)

Name: NF1271_low_139
Description: NF1271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1271_low_139
NF1271_low_139
[»] chr1 (30 HSPs)
chr1 (3-234)||(26540789-26541020)
chr1 (103-221)||(25958102-25958220)
chr1 (103-228)||(10064551-10064676)
chr1 (110-225)||(24306289-24306404)
chr1 (110-207)||(21449089-21449187)
chr1 (110-215)||(27117711-27117817)
chr1 (110-179)||(21847634-21847703)
chr1 (136-214)||(24306950-24307028)
chr1 (110-179)||(25405659-25405729)
chr1 (110-162)||(15544012-15544065)
chr1 (111-179)||(17610285-17610354)
chr1 (110-207)||(12208601-12208699)
chr1 (110-179)||(13345365-13345435)
chr1 (110-179)||(14779565-14779635)
chr1 (110-215)||(17837517-17837623)
chr1 (110-179)||(18736269-18736339)
chr1 (110-179)||(23038041-23038110)
chr1 (110-179)||(24281277-24281347)
chr1 (110-159)||(32383047-32383097)
chr1 (95-220)||(33712649-33712774)
chr1 (110-167)||(16359871-16359928)
chr1 (120-220)||(16787714-16787815)
chr1 (110-162)||(21988028-21988081)
chr1 (95-162)||(9787925-9787992)
chr1 (110-145)||(17359162-17359197)
chr1 (150-220)||(17017705-17017775)
chr1 (111-173)||(17121515-17121577)
chr1 (110-207)||(29242519-29242617)
chr1 (110-158)||(22664206-22664255)
chr1 (151-219)||(13135128-13135196)
[»] chr5 (32 HSPs)
chr5 (95-235)||(15544036-15544175)
chr5 (95-215)||(28253266-28253386)
chr5 (95-234)||(28142349-28142490)
chr5 (110-176)||(24266987-24267053)
chr5 (110-176)||(24343618-24343684)
chr5 (106-228)||(36175130-36175252)
chr5 (100-219)||(23380246-23380366)
chr5 (110-173)||(18208284-18208347)
chr5 (101-212)||(17185454-17185566)
chr5 (106-179)||(34487634-34487707)
chr5 (95-143)||(17769461-17769509)
chr5 (112-220)||(26120867-26120975)
chr5 (95-207)||(32417357-32417469)
chr5 (110-173)||(26121359-26121422)
chr5 (110-179)||(15375911-15375981)
chr5 (110-173)||(19004261-19004325)
chr5 (120-204)||(20534057-20534141)
chr5 (110-173)||(25550539-25550603)
chr5 (103-207)||(27921403-27921506)
chr5 (110-145)||(15469936-15469971)
chr5 (110-176)||(20315462-20315528)
chr5 (159-234)||(32452417-32452491)
chr5 (112-157)||(19086230-19086276)
chr5 (110-228)||(26110442-26110560)
chr5 (111-167)||(17431884-17431941)
chr5 (112-145)||(20419958-20419991)
chr5 (111-179)||(22755522-22755591)
chr5 (95-179)||(24167613-24167697)
chr5 (111-179)||(24245573-24245642)
chr5 (112-179)||(15690780-15690847)
chr5 (112-179)||(17171582-17171650)
chr5 (112-179)||(19283884-19283952)
[»] chr4 (45 HSPs)
chr4 (95-225)||(15050066-15050196)
chr4 (95-225)||(15104228-15104358)
chr4 (103-235)||(19900573-19900704)
chr4 (112-219)||(25643465-25643572)
chr4 (110-220)||(9052674-9052784)
chr4 (109-207)||(13908853-13908952)
chr4 (110-215)||(20315000-20315106)
chr4 (111-207)||(19492701-19492798)
chr4 (112-209)||(25121225-25121322)
chr4 (115-225)||(22526369-22526480)
chr4 (110-179)||(12578295-12578365)
chr4 (110-207)||(13692670-13692768)
chr4 (95-221)||(20317765-20317891)
chr4 (112-179)||(11521220-11521288)
chr4 (95-225)||(13587216-13587339)
chr4 (115-215)||(22218594-22218694)
chr4 (110-167)||(14648895-14648953)
chr4 (106-207)||(19562179-19562281)
chr4 (111-173)||(26115939-26116001)
chr4 (112-214)||(40215312-40215414)
chr4 (112-179)||(13992905-13992973)
chr4 (110-173)||(17672002-17672066)
chr4 (112-215)||(23080343-23080447)
chr4 (96-235)||(1833570-1833706)
chr4 (110-220)||(21323863-21323974)
chr4 (100-214)||(22345011-22345123)
chr4 (95-157)||(10106996-10107058)
chr4 (109-162)||(17709756-17709810)
chr4 (112-162)||(19374859-19374909)
chr4 (110-215)||(19882640-19882746)
chr4 (110-179)||(19929704-19929774)
chr4 (111-162)||(5679206-5679258)
chr4 (112-207)||(11490534-11490630)
chr4 (112-215)||(12839773-12839877)
chr4 (110-173)||(20829774-20829837)
chr4 (110-145)||(9737573-9737608)
chr4 (111-169)||(11700608-11700667)
chr4 (112-173)||(7582299-7582361)
chr4 (110-179)||(13128903-13128973)
chr4 (110-179)||(17216817-17216887)
chr4 (110-162)||(22176008-22176061)
chr4 (112-179)||(15047130-15047198)
chr4 (112-179)||(15107226-15107294)
chr4 (111-162)||(17951342-17951394)
chr4 (111-162)||(17955194-17955246)
[»] chr2 (24 HSPs)
chr2 (95-221)||(12557696-12557822)
chr2 (95-220)||(32439985-32440110)
chr2 (96-216)||(25070114-25070234)
chr2 (95-207)||(8447051-8447163)
chr2 (95-220)||(8503058-8503184)
chr2 (110-179)||(17743505-17743575)
chr2 (113-219)||(25936925-25937031)
chr2 (110-207)||(27909120-27909218)
chr2 (110-179)||(29719260-29719330)
chr2 (95-220)||(25939143-25939268)
chr2 (115-179)||(17349362-17349426)
chr2 (110-179)||(23011792-23011861)
chr2 (95-215)||(18553900-18554020)
chr2 (111-209)||(17889938-17890036)
chr2 (110-179)||(25888249-25888319)
chr2 (113-219)||(25933111-25933217)
chr2 (106-179)||(45621910-45621984)
chr2 (106-162)||(28770489-28770546)
chr2 (112-179)||(20174664-20174732)
chr2 (112-179)||(32085465-32085533)
chr2 (110-204)||(15339238-15339333)
chr2 (110-179)||(19200164-19200233)
chr2 (136-215)||(27418392-27418472)
chr2 (112-167)||(31804941-31804997)
[»] chr6 (31 HSPs)
chr6 (110-215)||(9726022-9726128)
chr6 (117-220)||(34478532-34478635)
chr6 (95-195)||(20722190-20722289)
chr6 (111-220)||(9385956-9386065)
chr6 (112-220)||(17729154-17729263)
chr6 (110-162)||(15466370-15466422)
chr6 (110-176)||(21672467-21672534)
chr6 (110-179)||(21907432-21907502)
chr6 (110-179)||(23143722-23143792)
chr6 (111-179)||(9516786-9516855)
chr6 (110-162)||(8039178-8039230)
chr6 (110-173)||(12183366-12183430)
chr6 (112-179)||(28933689-28933757)
chr6 (110-176)||(21679883-21679950)
chr6 (100-207)||(26215388-26215494)
chr6 (115-220)||(23645755-23645861)
chr6 (110-207)||(27737690-27737788)
chr6 (110-170)||(8241277-8241338)
chr6 (115-215)||(17299824-17299925)
chr6 (111-179)||(20005908-20005977)
chr6 (110-165)||(5624640-5624696)
chr6 (136-220)||(9386070-9386154)
chr6 (110-161)||(14079491-14079543)
chr6 (110-173)||(25927338-25927402)
chr6 (112-179)||(27124521-27124589)
chr6 (110-160)||(21932100-21932151)
chr6 (104-186)||(28589452-28589535)
chr6 (110-207)||(17827093-17827191)
chr6 (95-220)||(28586018-28586144)
chr6 (111-179)||(4339736-4339805)
chr6 (177-217)||(15614169-15614209)
[»] chr3 (29 HSPs)
chr3 (95-220)||(25756660-25756786)
chr3 (95-220)||(21074526-21074651)
chr3 (111-220)||(12759388-12759498)
chr3 (110-207)||(12805891-12805989)
chr3 (112-214)||(27542908-27543011)
chr3 (95-216)||(28728929-28729051)
chr3 (112-173)||(21825904-21825965)
chr3 (110-173)||(10917918-10917982)
chr3 (95-207)||(20339765-20339877)
chr3 (110-173)||(21301918-21301982)
chr3 (106-179)||(821543-821617)
chr3 (111-173)||(31286050-31286112)
chr3 (111-167)||(22349410-22349467)
chr3 (111-162)||(18736718-18736769)
chr3 (110-179)||(12411151-12411221)
chr3 (111-176)||(16245761-16245827)
chr3 (110-207)||(21303355-21303453)
chr3 (127-215)||(8557122-8557211)
chr3 (113-173)||(10923150-10923211)
chr3 (104-173)||(19706831-19706900)
chr3 (110-170)||(19908307-19908368)
chr3 (110-176)||(6289903-6289970)
chr3 (110-160)||(10744902-10744953)
chr3 (111-173)||(18458459-18458522)
chr3 (112-162)||(8143617-8143667)
chr3 (111-157)||(12752208-12752254)
chr3 (110-207)||(21325340-21325438)
chr3 (104-162)||(23056217-23056275)
chr3 (111-167)||(2167658-2167714)
[»] chr7 (58 HSPs)
chr7 (110-207)||(2563818-2563915)
chr7 (111-219)||(4258875-4258983)
chr7 (95-242)||(9916551-9916699)
chr7 (95-242)||(9924463-9924611)
chr7 (111-220)||(15303609-15303718)
chr7 (110-220)||(9864314-9864425)
chr7 (103-214)||(9866535-9866646)
chr7 (104-220)||(23093304-23093420)
chr7 (102-228)||(10937594-10937721)
chr7 (95-220)||(18449227-18449353)
chr7 (102-228)||(20174564-20174690)
chr7 (110-179)||(5108566-5108635)
chr7 (102-214)||(2453725-2453837)
chr7 (95-235)||(5047361-5047500)
chr7 (112-179)||(13759889-13759957)
chr7 (112-179)||(7397198-7397265)
chr7 (144-219)||(9078201-9078276)
chr7 (95-209)||(18662427-18662541)
chr7 (110-167)||(8054099-8054157)
chr7 (95-184)||(9890168-9890258)
chr7 (111-220)||(16306695-16306805)
chr7 (103-220)||(18465998-18466116)
chr7 (110-207)||(14195974-14196071)
chr7 (102-167)||(26134789-26134854)
chr7 (95-225)||(9720949-9721072)
chr7 (110-179)||(7318273-7318343)
chr7 (110-167)||(8054530-8054588)
chr7 (110-179)||(10587053-10587123)
chr7 (109-174)||(18661589-18661655)
chr7 (110-215)||(21230312-21230418)
chr7 (110-167)||(23099993-23100051)
chr7 (95-235)||(12391170-12391310)
chr7 (115-207)||(21227184-21227277)
chr7 (112-207)||(3329659-3329755)
chr7 (110-173)||(15869595-15869659)
chr7 (110-220)||(9500444-9500555)
chr7 (110-215)||(5797511-5797617)
chr7 (110-207)||(9731628-9731726)
chr7 (106-179)||(11221193-11221267)
chr7 (110-179)||(31492930-31493000)
chr7 (111-167)||(6042462-6042518)
chr7 (112-179)||(16365707-16365775)
chr7 (119-162)||(2953582-2953625)
chr7 (112-179)||(6005839-6005906)
chr7 (110-145)||(20582259-20582294)
chr7 (110-179)||(2350776-2350846)
chr7 (111-145)||(4986556-4986590)
chr7 (111-145)||(4990654-4990688)
chr7 (152-206)||(7748088-7748142)
chr7 (112-173)||(8979041-8979103)
chr7 (110-179)||(12329682-12329752)
chr7 (95-220)||(33035458-33035583)
chr7 (110-162)||(9574407-9574460)
chr7 (111-179)||(10584515-10584584)
chr7 (112-167)||(3734598-3734654)
chr7 (110-173)||(6013593-6013657)
chr7 (110-179)||(9130906-9130977)
chr7 (136-228)||(17203050-17203142)
[»] chr8 (24 HSPs)
chr8 (110-207)||(29382362-29382460)
chr8 (102-235)||(14075586-14075719)
chr8 (127-236)||(15292748-15292857)
chr8 (127-236)||(15473117-15473226)
chr8 (111-227)||(24119750-24119866)
chr8 (95-162)||(31288343-31288410)
chr8 (95-213)||(12268182-12268300)
chr8 (111-215)||(5850942-5851047)
chr8 (110-179)||(24269598-24269667)
chr8 (95-219)||(26008008-26008133)
chr8 (116-179)||(44011053-44011116)
chr8 (110-179)||(13697862-13697925)
chr8 (110-179)||(24644838-24644907)
chr8 (103-209)||(14006088-14006195)
chr8 (112-205)||(17101896-17101990)
chr8 (110-207)||(24114283-24114381)
chr8 (110-230)||(17976619-17976740)
chr8 (111-207)||(25226137-25226234)
chr8 (115-167)||(30783782-30783835)
chr8 (110-220)||(24904633-24904744)
chr8 (110-173)||(30122190-30122253)
chr8 (110-167)||(14528149-14528207)
chr8 (110-203)||(17972172-17972264)
chr8 (110-173)||(24110690-24110754)
[»] scaffold0394 (1 HSPs)
scaffold0394 (103-265)||(13853-14013)
[»] scaffold0016 (1 HSPs)
scaffold0016 (100-219)||(12099-12219)
[»] scaffold0622 (1 HSPs)
scaffold0622 (110-179)||(728-798)
[»] scaffold0085 (1 HSPs)
scaffold0085 (116-194)||(22287-22365)
[»] scaffold0042 (1 HSPs)
scaffold0042 (112-162)||(29909-29959)
[»] scaffold0035 (1 HSPs)
scaffold0035 (110-179)||(69913-69983)
[»] scaffold0019 (1 HSPs)
scaffold0019 (102-215)||(11232-11346)
[»] scaffold0005 (1 HSPs)
scaffold0005 (110-167)||(168339-168397)
[»] scaffold0043 (1 HSPs)
scaffold0043 (111-179)||(89883-89951)
[»] scaffold0008 (2 HSPs)
scaffold0008 (112-179)||(54862-54930)
scaffold0008 (110-162)||(48236-48289)
[»] scaffold0957 (1 HSPs)
scaffold0957 (110-173)||(3153-3216)
[»] scaffold0838 (1 HSPs)
scaffold0838 (111-173)||(2371-2434)
[»] scaffold0832 (1 HSPs)
scaffold0832 (111-173)||(2402-2465)
[»] scaffold0048 (1 HSPs)
scaffold0048 (110-220)||(78594-78705)
[»] scaffold0598 (1 HSPs)
scaffold0598 (106-162)||(5321-5377)


Alignment Details
Target: chr1 (Bit Score: 160; Significance: 3e-85; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 3 - 234
Target Start/End: Original strand, 26540789 - 26541020
Alignment:
Q  3 tctcttccttggtaatttgaaggaatgtgacaatcataacacattttacagttcctacatgcggcttaaggtgcgcattgatgccgcgataagatgatcg 102  Q
    |||||||||| || |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| || || |||| |||    
T  26540789 tctcttccttagtgatttgaaggaatgtgacaatcataacacgttttacagatcctacatgcggcttaaggtgcgcattgatgccacggtatgatggtcg 26540888  T
Q  103 gatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttact 202  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||| ||||||| || ||||||||||||||    
T  26540889 gatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgtaagtagagtatcgtatccacaaggattatcattccaactagacaatttgcgttact 26540988  T
Q  203 tatttgggaacaataaaactaaataagagata 234  Q
    ||||||||| |||||||| ||||||| |||||    
T  26540989 tatttgggagcaataaaaataaataaaagata 26541020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 221
Target Start/End: Original strand, 25958102 - 25958220
Alignment:
Q  103 gatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttact 202  Q
    |||||| | |||||||  ||||||||||| || |||| |||||||| ||||||||| ||| |||| ||||| ||||||||||||| ||||||  ||||||    
T  25958102 gatttaggaaagtgtattaaatcgtttacaaagtaatgaagtgtaaatagagtatcatatccacatggattgtcgttccaaccagacaatttatgttact 25958201  T
Q  203 tatttgggaacaataaaac 221  Q
    |||||||||||||||||||    
T  25958202 tatttgggaacaataaaac 25958220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 10064676 - 10064551
Alignment:
Q  103 gatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttact 202  Q
    ||||||| |||||||||||||||||||||||| ||||||| || |  |||| |||| ||| |||||||||| |||||| ||| ||||||||  | |||||    
T  10064676 gatttaaacaagtgtaccaaatcgtttaccaagtaataaaatgcaggtagaatatcatatccacaaggattttcgttcaaactaggcaattctcattact 10064577  T
Q  203 tatttgggaacaataaaactaaataa 228  Q
    ||||  |||||||| ||| |||||||    
T  10064576 tattaaggaacaattaaattaaataa 10064551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 225
Target Start/End: Complemental strand, 24306404 - 24306289
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttg 208  Q
    ||||||||||||| ||||||||||| |||||||||| ||| ||||||||||||| |||| |||||  |||| ||||||   |||| ||||||||||||||    
T  24306404 gcaagtgtaccaagtcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggatt-gcgtttcaaccaaataattcgcgttacttatttg 24306306  T
Q  209 ggaacaataaaactaaa 225  Q
     ||||||||||| ||||    
T  24306305 agaacaataaaaataaa 24306289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 21449089 - 21449187
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||| |||||||||| ||||| |  |||  ||||||  |||||||||||    
T  21449089 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcggccaaacaatttatgttacttattt 21449187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 27117817 - 27117711
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttg 208  Q
    |||||| |||||||||||||||||| |||||||||| ||| |||||||| |||| |||| | ||| ||||| ||||||  |||| ||||||||||||| |    
T  27117817 gcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtattgtattcacatgaattgtcgtttcaaccaaacaatctgcgttacttattag 27117718  T
Q  209 ggaacaa 215  Q
    |||||||    
T  27117717 ggaacaa 27117711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 21847634 - 21847703
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||| |||| |||| ||||| |||||    
T  21847634 gcaagtgtaccaaatcgtttaccaagtaataaagtctaagtagagtattgtatccacatggattgtcgtt 21847703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 24307028 - 24306950
Alignment:
Q  136 taataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgggaaca 214  Q
    ||||||||||||| ||||||||||||| || | ||||| ||||| |||| | ||||||  |||||||||||||||||||    
T  24307028 taataaagtgtaagtagagtatcgtattcatagggattgtcgtttcaactaagcaattcacgttacttatttgggaaca 24306950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 25405729 - 25405659
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||| ||||||||||| |||||||||| ||| || |||||||||| |||||||||| |||||    
T  25405729 gcaagtgtaccaagtcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtt 25405659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 15544065 - 15544012
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtat 162  Q
    ||||||||||||||||||||||||| |||||||||| ||| |||||||||||||    
T  15544065 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtat 15544012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 17610354 - 17610285
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaag-tgtaattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||||||||||||||| |||||||| | ||| ||||||||||||| |||| ||||| |||||    
T  17610354 caagtgtaccaaatcgtttaccaagtaataaagttataagtagagtatcgtatccacatggattgtcgtt 17610285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 12208601 - 12208699
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    |||||||||| |||||||||||||| |||||||||| ||| |||| |||| ||| |||| ||||| ||||| |  |||  ||||| |||||||||||||    
T  12208601 gcaagtgtactaaatcgtttaccaagtaataaagtgataagtagaatatcatatccacatggattgtcgtttcgtccaaacaattcgcgttacttattt 12208699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 13345435 - 13345365
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||||| ||||||||| |||||||||| ||| ||||||||| ||| |||| ||||| |||||    
T  13345435 gcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtt 13345365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 14779565 - 14779635
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||||||| |||||||| |||||| ||| ||||||||||||| ||| |||| ||||| |||||    
T  14779565 gcaagtgtaccaaatcatttaccaagtaataatgtgataattagagtatcatatccacagggattgtcgtt 14779635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 17837517 - 17837623
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaag-tgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttg 208  Q
    ||||||||||||||| ||||||||| |||||||| | ||| ||||||||| ||| |||||||||| || ||    | |  ||||| ||||||||||||||    
T  17837517 gcaagtgtaccaaattgtttaccaagtaataaagttataagtagagtatcatatccacaaggattgtcattttgtctaaacaattcgcgttacttatttg 17837616  T
Q  209 ggaacaa 215  Q
    |||||||    
T  17837617 ggaacaa 17837623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 18736339 - 18736269
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||||||||||| ||| |||||||||| ||| ||| ||||||||| |||| ||||| |||||    
T  18736339 gcaagtgtaccaaatcgtttaacaagtaataaagtgataagtagtgtatcgtatccacagggattgtcgtt 18736269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 23038110 - 23038041
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||||||||||||||| |||||||||| ||| | ||||||||||| |||| ||||| |||||    
T  23038110 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagt-gagtatcgtatccacatggattgtcgtt 23038041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 24281277 - 24281347
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||| |||||||||||||||||||| |||||||||| ||| |||| |||| ||| |||| |||||||||||    
T  24281277 gcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagattatcatatccacatggattatcgtt 24281347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 32383097 - 32383047
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcg 159  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||||||    
T  32383097 gcaagtgtaccaaatcgtttaccaagtaataaagtgataaatagagtatcg 32383047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 33712649 - 33712774
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatt 193  Q
    |||| ||||||||| |||||||||||||||| |||||||| |||||||||| |||||| | ||| ||||  | |   ||| |||||||||| ||| ||||    
T  33712649 gatggtcggatttaggcaagtgtaccaaatc-tttaccaaataataaagtgataattataatattgtatttagagttattgtcgttccaactaggaaatt 33712747  T
Q  194 tgcgttacttatttgggaacaataaaa 220  Q
     || |||||||||| ||||||| ||||    
T  33712748 cgcattacttatttaggaacaagaaaa 33712774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 16359871 - 16359928
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacaca 167  Q
    ||||||||||||||||||||||||| ||||||| ||||| || ||||| |||| ||||    
T  16359871 gcaagtgtaccaaatcgtttaccaagtaataaaatgtaagtatagtattgtatccaca 16359928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 16787815 - 16787714
Alignment:
Q  120 caaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgggaacaataa 218  Q
    ||||||||||| ||| |||||||||| ||| ||||||||||||| ||||  |||| |||||    |||  |||||||||||||||||||  |||||||||    
T  16787815 caaatcgtttatcaagtaataaagtgataagtagagtatcgtattcacatagattgtcgttttgcccaaacaatttgcgttacttatttttgaacaataa 16787716  T
Q  219 aa 220  Q
    ||    
T  16787715 aa 16787714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 21988081 - 21988028
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtat 162  Q
    |||||||||||||||| |||||||| |||||||||| ||| |||||||||||||    
T  21988081 gcaagtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtat 21988028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 162
Target Start/End: Complemental strand, 9787992 - 9787925
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtat 162  Q
    |||||||||||| | |||||||||||||||| |||| ||| |||||||||| ||| |||||||||||||    
T  9787992 gatgatcggatt-aggcaagtgtaccaaatcatttagcaagtaataaagtgataagtagagtatcgtat 9787925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 145
Target Start/End: Original strand, 17359162 - 17359197
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg 145  Q
    ||||||||||||||||||||||||| ||||||||||    
T  17359162 gcaagtgtaccaaatcgtttaccaagtaataaagtg 17359197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 17017775 - 17017705
Alignment:
Q  150 tagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgggaacaataaaa 220  Q
    |||||||||||||  ||| ||||| || ||||||| ||||||||  |||||||||||  ||||||||||||    
T  17017775 tagagtatcgtatcgacatggattttcattccaactaggcaattcacgttacttattatggaacaataaaa 17017705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 17121577 - 17121515
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggatt 173  Q
    |||||||| ||||| ||||| ||| ||||||||||||| ||||||||| ||| || |||||||    
T  17121577 caagtgtatcaaattgtttatcaagtaataaagtgtaagtagagtatcatatccataaggatt 17121515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 29242519 - 29242617
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    ||||||||||||||| ||||| ||| |||||||||| ||| ||||||||||||| || |  |||| ||||| || |||  ||||| ||||||| |||||    
T  29242519 gcaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccatagtgattgtcgtttcatccaaacaattcgcgttacatattt 29242617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 22664206 - 22664255
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatc 158  Q
    |||| |||||||||||||||||||| |||||||||| ||| |||||||||    
T  22664206 gcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagtatc 22664255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 13135196 - 13135128
Alignment:
Q  151 agagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgggaacaataaa 219  Q
    |||||| ||||| |||||||||| ||||| |||| ||||||||   || | ||||||||||||||||||    
T  13135196 agagtaccgtattcacaaggattgtcgtttcaactaggcaattcatgtgatttatttgggaacaataaa 13135128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 9e-36; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 95 - 235
Target Start/End: Original strand, 15544036 - 15544175
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaattt 194  Q
    |||| ||||||||| ||||||||||||||||||||||||| ||||||| ||| | |||||||||||||||| | |||||||||||| ||| |||||||      
T  15544036 gatggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaactgtcagtagagtatcgtatacatagggattatcgttcaaactaggcaatcc 15544135  T
Q  195 gcgttacttatttgggaacaataaaactaaataagagataa 235  Q
    ||||||||||||||| |||||||||| ||||||| ||||||    
T  15544136 gcgttacttatttggaaacaataaaa-taaataaaagataa 15544175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 95 - 215
Target Start/End: Original strand, 28253266 - 28253386
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaattt 194  Q
    |||| ||||||||| |||| |||||||||||||||||||| ||||||||||||| |||| |||||||| |||| |||||||||||||||  ||| ||||     
T  28253266 gatggtcggatttatgcaaatgtaccaaatcgtttaccaagtaataaagtgtaagtagaatatcgtattcacagggattatcgttccaagtaggaaattc 28253365  T
Q  195 gcgttacttatttgggaacaa 215  Q
    |||||||||||||| ||||||    
T  28253366 gcgttacttatttgagaacaa 28253386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 28142349 - 28142490
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagt-gtaattagagt-atcgtatacacaaggattatcgttccaaccaggcaat 192  Q
    |||| ||| |||||||||||||||  |||||||||| ||| ||||||||| ||||  ||||| ||||||| |||| ||||| |||||||||| | |||||    
T  28142349 gatggtcgaatttaagcaagtgtattaaatcgtttatcaaataataaagtagtaagcagagttatcgtattcacatggattgtcgttccaactatgcaat 28142448  T
Q  193 ttgcgttacttatttgggaacaataaaactaaataagagata 234  Q
    ||| ||||||||||||||||||||| || ||||||| |||||    
T  28142449 ttgtgttacttatttgggaacaatataaataaataaaagata 28142490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 24267053 - 24266987
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatc 176  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||    
T  24267053 gcaagtgtaccaaatcgtttaccaagtaataaagtgtaagtagagtatcgtatccacaaggattatc 24266987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 24343684 - 24343618
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatc 176  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||    
T  24343684 gcaagtgtaccaaatcgtttaccaagtaataaagtgtaagtagagtatcgtatccacaaggattatc 24343618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 106 - 228
Target Start/End: Original strand, 36175130 - 36175252
Alignment:
Q  106 ttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttat 205  Q
    |||| |||||||||||||||||||||||| |||||||||||   ||||||||||||| || ||||||| ||||| |  |||  |||  ||||||||||||    
T  36175130 ttaaacaagtgtaccaaatcgtttaccaagtaataaagtgtttgtagagtatcgtatccataaggattgtcgtttcgtccaaacaacatgcgttacttat 36175229  T
Q  206 ttgggaacaataaaactaaataa 228  Q
    ||  ||||||| ||| |||||||    
T  36175230 ttttgaacaattaaaataaataa 36175252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 219
Target Start/End: Complemental strand, 23380366 - 23380246
Alignment:
Q  100 tcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgt 198  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||| || ||| || | |||||||| || | ||||| || || |||| || ||| |||||     
T  23380366 tcggatttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtaaactatcgtattcatatggattgtcatttcaacaagacaacttgcgc 23380267  T
Q  199 tacttatttgggaacaataaa 219  Q
    |||||||||||||||||||||    
T  23380266 tacttatttgggaacaataaa 23380246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 18208347 - 18208284
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggatt 173  Q
    |||||||||||||||||||||| || ||||||||||||| ||||||||||||| |||| |||||    
T  18208347 gcaagtgtaccaaatcgtttacaaagtaataaagtgtaagtagagtatcgtatccacatggatt 18208284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 212
Target Start/End: Original strand, 17185454 - 17185566
Alignment:
Q  101 cggatttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgtt 199  Q
    ||||||||  ||||||||| ||||| |||||||| |||||||||| ||| |||||||||||||  ||| ||||| ||||| ||||||  |||||  ||||    
T  17185454 cggatttagacaagtgtactaaatcatttaccaaataataaagtgataagtagagtatcgtatctacagggattgtcgtttcaaccaaacaattcacgtt 17185553  T
Q  200 acttatttgggaa 212  Q
    || ||||||||||    
T  17185554 acgtatttgggaa 17185566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 34487634 - 34487707
Alignment:
Q  106 ttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||| |||| |||| ||| |||| ||||| |||||    
T  34487634 ttaagaaagtgtaccaaattgtttaccaagtaataaagtgtaagtagaatatcatatccacatggattgtcgtt 34487707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 17769509 - 17769461
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaag 143  Q
    |||| ||||||||| ||||||||||||||||||||||||| ||||||||    
T  17769509 gatggtcggatttatgcaagtgtaccaaatcgtttaccaagtaataaag 17769461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 26120867 - 26120975
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttggga 211  Q
    ||||||||||||| ||||||||  ||||||||| ||| ||||||||| ||| || ||||||| ||||| |  |||  ||||| || ||||||||||  ||    
T  26120867 aagtgtaccaaattgtttaccatgtaataaagtttaagtagagtatcatattcaaaaggattgtcgtttcgtccaaacaattagcattacttatttttga 26120966  T
Q  212 acaataaaa 220  Q
    |||||||||    
T  26120967 acaataaaa 26120975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 207
Target Start/End: Complemental strand, 32417469 - 32417357
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaattt 194  Q
    |||| ||| ||||| | ||||||||||||||||||| ||| ||||||||||||| ||||||||  |||  ||| |||||  |||| || | |||||||||    
T  32417469 gatggtcgaatttaggtaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtattatatcgacatggatttacgtttcacctaggcaattt 32417370  T
Q  195 gcgttacttattt 207  Q
      |||||||||||    
T  32417369 ctgttacttattt 32417357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 26121422 - 26121359
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggatt 173  Q
    ||||||||||||||||||||| ||| ||||||| ||||| |||||||| |||| |||| |||||    
T  26121422 gcaagtgtaccaaatcgtttagcaagtaataaaatgtaagtagagtatagtatccacagggatt 26121359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 15375981 - 15375911
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||||||||||||||| ||||||| || ||| ||||||||| ||| |||| ||||| |||||    
T  15375981 gcaagtgtaccaaatcgtttaccaaataataaaatgataagtagagtatcctatccacagggattgtcgtt 15375911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 19004325 - 19004261
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggatt 173  Q
    |||||||||| |||||||||||||| |||||||||| ||| | ||||||||||| |||| |||||    
T  19004325 gcaagtgtactaaatcgtttaccaagtaataaagtgataagtggagtatcgtatccacatggatt 19004261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 20534141 - 20534057
Alignment:
Q  120 caaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttactta 204  Q
    |||||| |||||||| ||||||||||||| || |||||||||| |  | ||||| |||||||||| | |||||| | ||||||||    
T  20534141 caaatcttttaccaagtaataaagtgtaagtaaagtatcgtatgcctagggattttcgttccaactacgcaattagtgttactta 20534057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 25550603 - 25550539
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggatt 173  Q
    ||||||||| ||||||||||||||| |||||||||| ||| ||||||||| ||| |||| |||||    
T  25550603 gcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacagggatt 25550539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 207
Target Start/End: Complemental strand, 27921506 - 27921403
Alignment:
Q  103 gatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttact 202  Q
    |||||| |||||||||| |||| ||||  ||| ||||||||||||| ||| |||||||||| ||| || || | ||| |||| ||||||||  |||||||    
T  27921506 gatttaggcaagtgtac-aaattgtttgtcaagtaataaagtgtaagtagtgtatcgtatatacatgggttgttgtttcaactaggcaattcacgttact 27921408  T
Q  203 tattt 207  Q
    |||||    
T  27921407 tattt 27921403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 145
Target Start/End: Original strand, 15469936 - 15469971
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg 145  Q
    ||||||||||||||||||||||||| ||||||||||    
T  15469936 gcaagtgtaccaaatcgtttaccaagtaataaagtg 15469971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 20315528 - 20315462
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatc 176  Q
    ||||||||||||| ||||||||||| |||||| ||| ||| ||||||||||||| |||| ||||||||    
T  20315528 gcaagtgtaccaa-tcgtttaccaagtaataatgtgataagtagagtatcgtatccacatggattatc 20315462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 32452491 - 32452417
Alignment:
Q  159 gtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgggaacaataaaactaaataagagata 234  Q
    |||| |||| ||||| |||||||||  |||||| | |||||||||||||| ||||||||||| ||||||| |||||    
T  32452491 gtatccacatggattgtcgttccaattaggcaactcgcgttacttatttgagaacaataaaa-taaataaaagata 32452417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 19086276 - 19086230
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtat 157  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||||||    
T  19086276 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtat 19086230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 228
Target Start/End: Complemental strand, 26110560 - 26110442
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgg 209  Q
    ||||||||||| ||||||||| ||| ||||||| ||||| ||||||||  ||| |||| ||||| | ||| || |||  ||||||| ||||| |||||      
T  26110560 gcaagtgtaccgaatcgtttatcaagtaataaaatgtaagtagagtataatatccacagggatttttgtttcatccaatcaatttgtgttacatattttt 26110461  T
Q  210 gaacaataaaactaaataa 228  Q
     |||| ||||| |||||||    
T  26110460 aaacagtaaaattaaataa 26110442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 17431884 - 17431941
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagt-gtaattagagtatcgtatacaca 167  Q
    ||||||||| |||||||||||||| ||||||||| | || ||||||||||||| ||||    
T  17431884 caagtgtactaaatcgtttaccaagtaataaagtggaaagtagagtatcgtatccaca 17431941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 145
Target Start/End: Original strand, 20419958 - 20419991
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg 145  Q
    ||||||||||||||||||||||| ||||||||||    
T  20419958 aagtgtaccaaatcgtttaccaagtaataaagtg 20419991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 22755522 - 22755591
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||| ||||||||||||| |||| ||| | ||| ||||||||||||| || ||||||| |||||    
T  22755522 caagtgtaccgaatcgtttaccaagtaatgaagagataagtagagtatcgtatccataaggattgtcgtt 22755591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 179
Target Start/End: Complemental strand, 24167697 - 24167613
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagt-gtaattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||| | | |||||||  |||||||||||||| ||||||||| |||| ||||||||| |||| ||| ||||| |||||    
T  24167697 gatgatcggatt-aggtaagtgtattaaatcgtttaccaagtaataaagtagtaagtagagtatcatatatacatggattgtcgtt 24167613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 24245642 - 24245573
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||  ||||||| ||||||  |||||||||| ||| ||||||||||||| |||||||||| |||||    
T  24245642 caagtgtcacaaatcgcttaccatgtaataaagtgataagtagagtatcgtatccacaaggattgtcgtt 24245573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 15690780 - 15690847
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||| |||||||||||||||||| |||||||||| ||| ||||||||||||| ||| || ||| |||||    
T  15690780 aagtttaccaaatcgtttaccaa-taataaagtgataagtagagtatcgtatccacgagaattgtcgtt 15690847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 17171650 - 17171582
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||||| |||| ||| |||||||||| ||| ||||| ||||||| |||| ||||| |||||    
T  17171650 aagtgtaccaaatcttttatcaagtaataaagtgataagtagagcatcgtatccacatggattgtcgtt 17171582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 19283952 - 19283884
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||| || |||||||||||||| |||||||||| ||| |||||||| |||| |||||| |||| ||||    
T  19283952 aagtgcactaaatcgtttaccaaataataaagtgataagtagagtattgtatccacaagaattaacgtt 19283884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 8e-30; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 95 - 225
Target Start/End: Complemental strand, 15050196 - 15050066
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaattt 194  Q
    |||| ||||||||| ||||||||| |||||| |||||||| ||||||||||||| |||| || |||  ||||| ||||| || ||||||| || ||||||    
T  15050196 gatggtcggatttaggcaagtgtatcaaatcatttaccaagtaataaagtgtaagtagaataccgtgaacacatggattgtcattccaactagacaattt 15050097  T
Q  195 gcgttacttatttgggaacaataaaactaaa 225  Q
    |||||||||||||||||||||||||| ||||    
T  15050096 gcgttacttatttgggaacaataaaaataaa 15050066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 95 - 225
Target Start/End: Original strand, 15104228 - 15104358
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaattt 194  Q
    |||| ||||||||| ||||||||| |||||| |||||||| ||||||||||||| |||| || |||  ||||| ||||| || ||||||| || ||||||    
T  15104228 gatggtcggatttaggcaagtgtatcaaatcatttaccaagtaataaagtgtaagtagaataccgtgaacacatggattgtcattccaactagacaattt 15104327  T
Q  195 gcgttacttatttgggaacaataaaactaaa 225  Q
    |||||||||||||||||||||||||| ||||    
T  15104328 gcgttacttatttgggaacaataaaaataaa 15104358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 103 - 235
Target Start/End: Original strand, 19900573 - 19900704
Alignment:
Q  103 gatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttact 202  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||||| ||||||||| ||| ||||| |||| |||||||||| ||||||||  | |||||    
T  19900573 gatttaggcaagtgtaccaaattgtttaccaagtaataaagtgtaagtagagtatcatattcacaaagattgtcgttccaactaggcaattcacattact 19900672  T
Q  203 tatttgggaacaataaaactaaataagagataa 235  Q
    |||||   |||||||||| ||||||| ||||||    
T  19900673 tatttcataacaataaaa-taaataaaagataa 19900704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 25643465 - 25643572
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttggga 211  Q
    |||||||| |||||||||  ||| ||||||||||||| ||||||||||||| |||| || || || || |||  ||||||||| ||||||||||||||||    
T  25643465 aagtgtactaaatcgtttgtcaagtaataaagtgtaactagagtatcgtatccacaggggttgtcatttcaattaggcaatttacgttacttatttggga 25643564  T
Q  212 acaataaa 219  Q
    ||||||||    
T  25643565 acaataaa 25643572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 9052674 - 9052784
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgg 209  Q
    |||||||||||||||| |||||||| ||||||| ||||| ||||||||||||| | ||| |||| | ||| ||||||  |||||  |||||||||||| |    
T  9052674 gcaagtgtaccaaatcatttaccaagtaataaaatgtaagtagagtatcgtatccgcaaagattgttgtttcaaccaaacaattcacgttacttattttg 9052773  T
Q  210 gaacaataaaa 220  Q
    |||||||||||    
T  9052774 gaacaataaaa 9052784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 207
Target Start/End: Original strand, 13908853 - 13908952
Alignment:
Q  109 agcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    |||||||||||||||||||||||||| |||||||||| ||| ||||||||||||| |||||||||| ||||| |  |||  ||||| | |||||||||||    
T  13908853 agcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcgtgttacttattt 13908952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 20315000 - 20315106
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttg 208  Q
    ||||||||||||||||||||||||| ||||||| || ||| |||| |||| ||| |||||||||| ||||| |  |||  ||||||||||||||||||||    
T  20315000 gcaagtgtaccaaatcgtttaccaagtaataaattgataagtagaatatcatatccacaaggattgtcgtttcgtccaaacaatttgcgttacttatttg 20315099  T
Q  209 ggaacaa 215  Q
     ||||||    
T  20315100 agaacaa 20315106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 19492798 - 19492701
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    |||||||||||||||||||||||| |||||||| | ||| ||||||||||||| |||||| ||| ||||| || |||  ||||| |||||||||||||    
T  19492798 caagtgtaccaaatcgtttaccaagtaataaagggataagtagagtatcgtatccacaagaattgtcgtttcatccaaacaattcgcgttacttattt 19492701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 25121322 - 25121225
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgg 209  Q
    |||||| |||||||||||||||| ||||||||||||| || |||||||||| |||||||||| | ||| |  |||  ||||| |||||||||||||||    
T  25121322 aagtgttccaaatcgtttaccaagtaataaagtgtaagtatagtatcgtatccacaaggattgtggtttcgtccaaacaattcgcgttacttatttgg 25121225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 225
Target Start/End: Original strand, 22526369 - 22526480
Alignment:
Q  115 tgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgggaac 213  Q
    |||||||||||||||| ||| |||||||||| ||| ||||||||||||| |||| | ||| ||||| ||||||  | || || |||||||||||||||||    
T  22526369 tgtaccaaatcgtttatcaaataataaagtgataagtagagtatcgtatccacatgaattgtcgtttcaaccaaaccatctgtgttacttatttgggaac 22526468  T
Q  214 aataaaactaaa 225  Q
     |||||| ||||    
T  22526469 gataaaaataaa 22526480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 12578365 - 12578295
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||||||| |||||||| |||||||||| ||||||||||||||||| |||| ||||| |||||    
T  12578365 gcaagtgtaccaaatcatttaccaaataataaagtgataattagagtatcgtatccacatggattgtcgtt 12578295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 13692768 - 13692670
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||||| ||| |||| ||||| ||||| | ||||  ||||| | |||||||||||    
T  13692768 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgaccaaacaattcgtgttacttattt 13692670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 20317891 - 20317765
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaattt 194  Q
    |||| |||||||||||||||| ||| |||| ||||||||  ||||||| ||||| ||||||||||||| |||| | ||| |||||| ||| ||  ||||     
T  20317891 gatggtcggatttaagcaagtatactaaattgtttaccatgtaataaaatgtaagtagagtatcgtattcacatgaattgtcgttctaactagaaaattc 20317792  T
Q  195 gcgttacttatttgggaacaataaaac 221  Q
     | ||| |||||| |||||||||||||    
T  20317791 acattatttatttaggaacaataaaac 20317765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 11521288 - 11521220
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||| ||||| |||||    
T  11521288 aagtgtaccaaatcgtttatcaaataataaagtgataagtagagtatcgtatacacatggattgtcgtt 11521220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 225
Target Start/End: Original strand, 13587216 - 13587339
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaattt 194  Q
    ||||||| |||||| ||||||||||||||||||||||||| |||||||||       ||  ||||||| |||| | |||| |||| ||||||  |||||     
T  13587216 gatgatcagatttatgcaagtgtaccaaatcgtttaccaaataataaagt-------gataatcgtatccacatgaattaccgtttcaaccaaacaattc 13587308  T
Q  195 gcgttacttatttgggaacaataaaactaaa 225  Q
    |||| |||||||||| |||||||||| ||||    
T  13587309 gcgtcacttatttggaaacaataaaaataaa 13587339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 215
Target Start/End: Complemental strand, 22218694 - 22218594
Alignment:
Q  115 tgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgggaaca 214  Q
    ||||| |||| ||||| ||| ||||||||||||| ||||||||||||| || || |||| | |||||||| ||  ||||||| ||| |||||||||||||    
T  22218694 tgtacaaaattgtttatcaagtaataaagtgtaagtagagtatcgtatccataaagattgttgttccaactagaaaatttgcattatttatttgggaaca 22218595  T
Q  215 a 215  Q
    |    
T  22218594 a 22218594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 14648895 - 14648953
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacaca 167  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||| ||||    
T  14648895 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 14648953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 207
Target Start/End: Complemental strand, 19562281 - 19562179
Alignment:
Q  106 ttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttactta 204  Q
    |||||||||||||||||||| |||||||| |||||||||| ||| || |||||||| | |||||| ||| ||||| || |||  |||||||  |||||||    
T  19562281 ttaagcaagtgtaccaaatcatttaccaagtaataaagtgataagtaaagtatcgtgtccacaagtattgtcgtttcatccaaacaatttgtattactta 19562182  T
Q  205 ttt 207  Q
    |||    
T  19562181 ttt 19562179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 26116001 - 26115939
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggatt 173  Q
    |||||||||||||||||||| ||| |||||| ||||||||| |||||||||| || |||||||    
T  26116001 caagtgtaccaaatcgtttatcaagtaataacgtgtaattaaagtatcgtatccataaggatt 26115939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 40215414 - 40215312
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttggga 211  Q
    |||||||||| || ||||||||| ||||||||| ||| |||| |||||||| ||||| |||    |||||||| ||||||||  | ||||||||||||||    
T  40215414 aagtgtaccagattgtttaccaaataataaagtttaagtagattatcgtatccacaaagatagatgttccaactaggcaattcacattacttatttggga 40215315  T
Q  212 aca 214  Q
    |||    
T  40215314 aca 40215312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 13992973 - 13992905
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagt-gtaattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||| ||||||||| ||||||||| |||| ||||||||||||| |||| ||||| |||||    
T  13992973 aagtgtaccaaattgtttaccaagtaataaagtggtaagtagagtatcgtatccacatggattttcgtt 13992905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 17672002 - 17672066
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggatt 173  Q
    ||||||||||||||||||||||||| |||||||||| ||| |||||||| |||| |||| |||||    
T  17672002 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacatggatt 17672066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 23080343 - 23080447
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttggg 210  Q
    |||||||| ||||  |||||||| |||||| ||| ||| |||| ||| |||| |||| ||||| ||||| ||||||  |||||||||||||||||||| |    
T  23080343 aagtgtactaaataatttaccaaataataaggtgataagtagaatattgtattcacatggattgtcgtttcaaccaaacaatttgcgttacttatttgag 23080442  T
Q  211 aacaa 215  Q
    |||||    
T  23080443 aacaa 23080447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 235
Target Start/End: Complemental strand, 1833706 - 1833570
Alignment:
Q  96 atgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaattt 194  Q
    ||||||||||||| ||||||  | ||||||||||||||| |||||||||| ||| ||||     |||| |||| ||||| ||||| ||||    |||||     
T  1833706 atgatcggatttaggcaagtacatcaaatcgtttaccaagtaataaagtgataagtaga----tgtatccacatggattgtcgtttcaactgaacaattc 1833611  T
Q  195 gcgttacttatttgggaacaataaaactaaataagagataa 235  Q
    || |||||||||| |||||||||||| ||||||| ||||||    
T  1833610 gcattacttatttaggaacaataaaaataaataaaagataa 1833570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 220
Target Start/End: Complemental strand, 21323974 - 21323863
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttg 208  Q
    |||||||||| |||||||||||||| |||||| ||| | | ||||||||||||| ||||  |||| ||||| |  |||  ||||| |||||||||||||     
T  21323974 gcaagtgtactaaatcgtttaccaaataataatgtgatcagtagagtatcgtatccacatagattgtcgtttcgtccaaacaattcgcgttacttatttt 21323875  T
Q  209 ggaacaataaaa 220  Q
     |||||||||||    
T  21323874 tgaacaataaaa 21323863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 214
Target Start/End: Original strand, 22345011 - 22345123
Alignment:
Q  100 tcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgtt 199  Q
    ||||||||| |||| || ||| |||| |||| ||| |||||||| |||  ||||||||||||| |||| ||||| |||||||||   || |||| | |||    
T  22345011 tcggatttaggcaaatgcacctaatcatttatcaagtaataaagagtatgtagagtatcgtatccacatggattgtcgttccaa--tggaaattcgtgtt 22345108  T
Q  200 acttatttgggaaca 214  Q
    |||||||||||||||    
T  22345109 acttatttgggaaca 22345123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 10106996 - 10107058
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtat 157  Q
    |||| ||||||||| ||||||||| ||||||||||||||| ||||||| || || ||||||||    
T  10106996 gatggtcggatttaggcaagtgtagcaaatcgtttaccaagtaataaattgcaagtagagtat 10107058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 17709756 - 17709810
Alignment:
Q  109 agcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtat 162  Q
    |||||||||||||||||||||||||| |||||||||| ||| |||||||| ||||    
T  17709756 agcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtat 17709810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 19374909 - 19374859
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtat 162  Q
    ||||||||||||||||||| ||| ||||||| ||||| |||||||||||||    
T  19374909 aagtgtaccaaatcgtttatcaagtaataaaatgtaagtagagtatcgtat 19374859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 19882640 - 19882746
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttg 208  Q
    |||||||||| |||||||||| ||| |||||||||| | | |||||||||||||  ||| ||||| ||||| |  |||  ||||| ||||||||||||||    
T  19882640 gcaagtgtacaaaatcgtttatcaagtaataaagtgattagtagagtatcgtatcaacatggattgtcgtttcgtccaaacaattcgcgttacttatttg 19882739  T
Q  209 ggaacaa 215  Q
    | |||||    
T  19882740 gaaacaa 19882746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 19929774 - 19929704
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||||||| |||||||| ||| |||||| ||| ||||||||||||| |||| ||||| |||||    
T  19929774 gcaagtgtaccaaatcatttaccaagtaacaaagtgataaatagagtatcgtatccacatggattgtcgtt 19929704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 5679206 - 5679258
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtat 162  Q
    |||||||||||||||||||||||| |||||||||| | | |||||||||||||    
T  5679206 caagtgtaccaaatcgtttaccaagtaataaagtgattagtagagtatcgtat 5679258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 207
Target Start/End: Original strand, 11490534 - 11490630
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    ||||||||||||| ||||| ||| |||||||||| ||| ||||||||||||| |||| ||||| | ||| |  |||  ||||| |||||||||||||    
T  11490534 aagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccacagggattgtagtttcttccaaacaattcgcgttacttattt 11490630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 215
Target Start/End: Complemental strand, 12839877 - 12839773
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttggg 210  Q
    |||||||| |||||| ||||||||||||||| || ||  ||||||||||||| |||||||||| || || ||| |   ||||| || ||| |||||||||    
T  12839877 aagtgtacaaaatcgcttaccaattaataaaatgataggtagagtatcgtatccacaaggattgtcatttcaatctaacaattcgcattaattatttggg 12839778  T
Q  211 aacaa 215  Q
    |||||    
T  12839777 aacaa 12839773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 20829837 - 20829774
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggatt 173  Q
    ||||||||||||||||||||||||| |||||||||| ||| | |||||| |||| ||||||||||    
T  20829837 gcaagtgtaccaaatcgtttaccaagtaataaagtgataact-gagtattgtatccacaaggatt 20829774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 9737608 - 9737573
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg 145  Q
    ||||||||||||||||||||||||| ||||||||||    
T  9737608 gcaagtgtaccaaatcgtttaccaagtaataaagtg 9737573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 11700667 - 11700608
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaag 169  Q
    |||||||||||||| ||||||||| ||||||| || ||| ||||||||||||| ||||||    
T  11700667 caagtgtaccaaattgtttaccaagtaataaaatgataaatagagtatcgtatccacaag 11700608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 173
Target Start/End: Original strand, 7582299 - 7582361
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggatt 173  Q
    |||||||||||||| |||||||| |||||||||| ||| ||||||||| ||| |||| |||||    
T  7582299 aagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggatt 7582361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 13128973 - 13128903
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||||||||||||||| ||||||| || ||| |||||||| |||| || | ||||| |||||    
T  13128973 gcaagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtattgtatccatagggattgtcgtt 13128903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 17216817 - 17216887
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||| ||||||||||||||||||||  ||||||||| ||| ||||||||| ||| |||| ||||| |||||    
T  17216817 gcaaatgtaccaaatcgtttaccaagcaataaagtgataagtagagtatcatatccacatggattgtcgtt 17216887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 22176061 - 22176008
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtat 162  Q
    ||||||||||||||||||||| ||| |||||||||| ||| |||||||| ||||    
T  22176061 gcaagtgtaccaaatcgtttatcaagtaataaagtgataagtagagtattgtat 22176008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 15047130 - 15047198
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||| |||||||||||||||| |||||||||| ||| ||||| |||||||  ||| ||||| |||||    
T  15047130 aagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgtt 15047198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 15107294 - 15107226
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||| |||||||||||||||| |||||||||| ||| ||||| |||||||  ||| ||||| |||||    
T  15107294 aagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgtt 15107226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 17951394 - 17951342
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtat 162  Q
    |||||||||||||||||||||||| || ||||||| ||| || ||||||||||    
T  17951394 caagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtat 17951342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 17955246 - 17955194
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtat 162  Q
    |||||||||||||||||||||||| || ||||||| ||| || ||||||||||    
T  17955246 caagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtat 17955194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 8e-30; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 12557822 - 12557696
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaattt 194  Q
    |||| ||||||||| |||||||||||||||| |||||||| ||||||||||||| |||| ||||| || ||||||||||  |||| |||  |||||||||    
T  12557822 gatggtcggatttaggcaagtgtaccaaatcttttaccaagtaataaagtgtaagtagaatatcgaatccacaaggattgccgtttcaattaggcaattt 12557723  T
Q  195 gcgttacttatttgggaacaataaaac 221  Q
    | |||||||| ||||||||||||||||    
T  12557722 gtgttacttacttgggaacaataaaac 12557696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 32440110 - 32439985
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaattt 194  Q
    |||| ||||||| | ||||||||||||||| |||||||||  |||||||||||| || |||||||||| ||| |||||||||||| |||  |||||||||    
T  32440110 gatggtcggattcatgcaagtgtaccaaattgtttaccaagaaataaagtgtaaataaagtatcgtatccacgaggattatcgtttcaattaggcaattt 32440011  T
Q  195 gcgttacttatttgggaacaataaaa 220  Q
    | |||||||||||| |||||| ||||    
T  32440010 gtgttacttatttgagaacaagaaaa 32439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 25070114 - 25070234
Alignment:
Q  96 atgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttg 195  Q
    |||| ||||||||  ||||| || ||||||||||| ||| ||||||||||||| |||||||||| || |||||||||| |||||||||| || |||||      
T  25070114 atgaacggatttagacaagtatatcaaatcgtttatcaaataataaagtgtaagtagagtatcgcatccacaaggattgtcgttccaactagacaattca 25070213  T
Q  196 cgttacttatttgggaacaat 216  Q
    |||||||||||||||||||||    
T  25070214 cgttacttatttgggaacaat 25070234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 207
Target Start/End: Complemental strand, 8447163 - 8447051
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaattt 194  Q
    |||| ||| ||||| ||||||||||||||||||||||||| ||||||||| ||| |||| |||||||| |||| ||||| |||||||||| || ||| |     
T  8447163 gatggtcgaatttaggcaagtgtaccaaatcgtttaccaagtaataaagtataagtagattatcgtatccacatggattgtcgttccaactagacaactc 8447064  T
Q  195 gcgttacttattt 207  Q
    |||||||||||||    
T  8447063 gcgttacttattt 8447051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 8503184 - 8503058
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatt 193  Q
    |||| ||| ||||| ||||||||||||||||||||||||| |||||| ||| ||| ||||| ||| ||| |||| ||||| || || ||||||  |||||    
T  8503184 gatggtcgtatttaggcaagtgtaccaaatcgtttaccaagtaataacgtgataagtagaggatcatatccacatggattgtcatttcaaccaaacaatt 8503085  T
Q  194 tgcgttacttatttgggaacaataaaa 220  Q
    ||||||||| |||||||||||||||||    
T  8503084 tgcgttactaatttgggaacaataaaa 8503058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 17743575 - 17743505
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||| |||| |||||||||||    
T  17743575 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcgtt 17743505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 25936925 - 25937031
Alignment:
Q  113 agtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgggaa 212  Q
    ||||||||| ||||||||  || ||||||||||||| ||||| ||| ||| |||| | || || |||||||| |||||||||| ||||||||||| ||||    
T  25936925 agtgtaccacatcgtttattaagtaataaagtgtaagtagagaatcatatccacatgtatgattgttccaactaggcaatttgtgttacttatttaggaa 25937024  T
Q  213 caataaa 219  Q
    |||||||    
T  25937025 caataaa 25937031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 27909218 - 27909120
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||| |||| || |||| ||| || |||  |||||  ||||||||||||    
T  27909218 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatgggttattgtttcatccaaacaattcacgttacttattt 27909120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 29719330 - 29719260
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||||||||||||||| |||||||||| ||| |||| |||||||| |||||||||| |||||    
T  29719330 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagattatcgtatccacaaggattgtcgtt 29719260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 25939143 - 25939268
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaattt 194  Q
    |||| |||||||||  | ||||||||| ||| |||| ||| ||||||||||||| || |||||||||| || ||||||| ||||| ||||||  |||||     
T  25939143 gatggtcggatttagactagtgtaccacatcatttatcaagtaataaagtgtaagtaaagtatcgtatccataaggattttcgtttcaaccaaacaattc 25939242  T
Q  195 gcgttacttatttgggaacaataaaa 220  Q
     |||||||| | || |||||||||||    
T  25939243 acgttacttgtctgagaacaataaaa 25939268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 17349362 - 17349426
Alignment:
Q  115 tgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||||||| ||||| |||| |||||    
T  17349362 tgtactaaatcgtttaccaagtaataaagtgtaagtagagtatcgtatccacaaagattgtcgtt 17349426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 23011861 - 23011792
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||||||  |||||||| ||||||||||||| |||| ||| |||| |||||||||| |||||    
T  23011861 gcaagtgtaccaaattttttaccaagtaataaagtgtaagtagattattgtatccacaaggattgtcgtt 23011792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 215
Target Start/End: Complemental strand, 18554020 - 18553900
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaattt 194  Q
    |||| ||||||||| |||||||||| |||| | ||| ||| || |||||| ||||||||||||| |||  ||| ||||| || ||||||| || |||||     
T  18554020 gatggtcggatttaggcaagtgtacaaaattggttatcaagtagtaaagtataattagagtatcatatctacagggattgtcattccaactagacaattc 18553921  T
Q  195 gcgttacttatttgggaacaa 215  Q
     |||||||||||  |||||||    
T  18553920 acgttacttattcaggaacaa 18553900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 209
Target Start/End: Original strand, 17889938 - 17890036
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgg 209  Q
    ||||||||||||||||||||| || ||||| ||||||| ||| ||||| ||| || | ||||| ||||| | | ||  |||||||||||| ||||||||    
T  17889938 caagtgtaccaaatcgtttactaaataatacagtgtaagtagggtatcatattcatagggattgtcgtttcgatcaaacaatttgcgttaattatttgg 17890036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 25888319 - 25888249
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||||| ||||||||| |||||||||| ||| || |||||||||| |||| ||||| |||||    
T  25888319 gcaagtgtaccaaattgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcgtt 25888249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 25933111 - 25933217
Alignment:
Q  113 agtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgggaa 212  Q
    ||||||||| ||||||||  ||  |||||||||||| ||||| ||| ||| |||| |||| || |||||||| |||||||  |  |||||||||| ||||    
T  25933111 agtgtaccacatcgtttattaagcaataaagtgtaagtagagaatcatattcacacggatgattgttccaactaggcaatcggttttacttatttaggaa 25933210  T
Q  213 caataaa 219  Q
    |||||||    
T  25933211 caataaa 25933217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 179
Target Start/End: Complemental strand, 45621984 - 45621910
Alignment:
Q  106 ttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||| |||||||| |||||||||||||| ||||||||||  || |||||||||||||  ||||||||| |||||    
T  45621984 ttaagaaagtgtacaaaatcgtttaccaagtaataaagtgagaagtagagtatcgtatctacaaggattgtcgtt 45621910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 28770546 - 28770489
Alignment:
Q  106 ttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtat 162  Q
    ||||||| |||||||||||| |||||||| |||||||||| ||| |||||||||||||    
T  28770546 ttaagcacgtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtat 28770489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 20174732 - 20174664
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||||||| | | |||| ||||| |||||    
T  20174732 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatttccacatggattgtcgtt 20174664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 32085465 - 32085533
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||| ||||||||| |||||||||| ||| ||||||||| ||| |||| ||||| |||||    
T  32085465 aagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtt 32085533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 204
Target Start/End: Original strand, 15339238 - 15339333
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttactta 204  Q
    |||||||||||||||| |||||||| ||||||||||  || ||||||||| ||| |||| ||||| ||||| |  |||  ||||| ||||||||||    
T  15339238 gcaagtgtaccaaatcatttaccaagtaataaagtgaaaagtagagtatcatatccacatggattgtcgtttcgtccaaacaattagcgttactta 15339333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 19200233 - 19200164
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||||||| |||||||| |||||| ||| ||| | ||||||||||| |||||||||| |||||    
T  19200233 gcaagtgtaccaaatcttttaccaaataataatgtgataagt-gagtatcgtatccacaaggattgtcgtt 19200164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 27418392 - 27418472
Alignment:
Q  136 taataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgggaacaa 215  Q
    |||||||||| ||| ||||||||| ||| |||| |||||||| || ||||||  ||||| | ||||||||||| |||||||    
T  27418392 taataaagtgataagtagagtatcatatccacatggattatcatttcaaccaaacaattcgtgttacttattttggaacaa 27418472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 31804997 - 31804941
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacaca 167  Q
    ||||||||||||| ||||||||| |||||||||| ||| |||||||| |||| ||||    
T  31804997 aagtgtaccaaattgtttaccaaataataaagtgataagtagagtattgtatccaca 31804941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 5e-25; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 9726022 - 9726128
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttg 208  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||| |||| ||||| ||||| |  |||  ||||||||||||||||||||    
T  9726022 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaatttgcgttacttatttg 9726121  T
Q  209 ggaacaa 215  Q
    |||||||    
T  9726122 ggaacaa 9726128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 34478532 - 34478635
Alignment:
Q  117 taccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgggaacaat 216  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||  | || |||| ||||||||   ||||||| ||||| ||||||    
T  34478532 taccaaatcgtttaccaaataataaagtgtaagtagagtatcgtatccacaaggattgacatttcaactaggcaattcatgttacttttttggaaacaat 34478631  T
Q  217 aaaa 220  Q
    ||||    
T  34478632 aaaa 34478635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 195
Target Start/End: Complemental strand, 20722289 - 20722190
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaattt 194  Q
    |||| ||||||||| |||| |||||||||||||||||||| ||||||||| ||| ||||||||  ||| |||||||||| || ||||||| |||||||||    
T  20722289 gatggtcggatttaggcaaatgtaccaaatcgtttaccaagtaataaagt-taagtagagtataatatccacaaggattgtctttccaactaggcaattt 20722191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 9385956 - 9386065
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttggg 210  Q
    |||||||||||||| | ||||||| |||||||||| || ||||||  ||||| |||| ||||| ||||| |||| ||||||||  | |||||||||| ||    
T  9385956 caagtgtaccaaattggttaccaagtaataaagtgcaagtagagtcgcgtatccacatggattgtcgtttcaactaggcaattcacattacttatttagg 9386055  T
Q  211 aacaataaaa 220  Q
    ||||| ||||    
T  9386056 aacaagaaaa 9386065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 17729154 - 17729263
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttggg 210  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||||||||||| ||||| |||| ||||| |  |||  | ||| ||||||| | ||||||    
T  17729154 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaagattgtcgtttcgtccaaacgattcgcgttacatgtttggg 17729253  T
Q  211 aacaataaaa 220  Q
    ||||| ||||    
T  17729254 aacaacaaaa 17729263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 15466370 - 15466422
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtat 162  Q
    ||||||||||||||||||||||||| ||||||||||||  |||||||||||||    
T  15466370 gcaagtgtaccaaatcgtttaccaagtaataaagtgtacgtagagtatcgtat 15466422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 21672534 - 21672467
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatc 176  Q
    ||||||| ||||||||||||||||| |||||||||| ||| ||||||||||||| |||| ||||||||    
T  21672534 gcaagtgcaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatc 21672467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 21907432 - 21907502
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||| |||||||||||||||||| |||||||||| ||| || |||||||||| |||||||||| |||||    
T  21907432 gcaagtataccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtt 21907502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 23143722 - 23143792
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||||||| ||||||||||||||||||| ||| ||||||||| ||| |||| ||||| |||||    
T  23143722 gcaagtgtaccaaatcatttaccaattaataaagtgataagtagagtatcatatccacagggattgtcgtt 23143792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 9516786 - 9516855
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||||||||||||| | |||||||||| ||| ||||||||||||| |||| ||||| |||||    
T  9516786 caagtgtaccaaatcgtttacctagtaataaagtgataagtagagtatcgtatccacatggattgtcgtt 9516855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 8039230 - 8039178
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtat 162  Q
    |||||||| |||||||||||||||| ||||||||||||| | |||||||||||    
T  8039230 gcaagtgtgccaaatcgtttaccaagtaataaagtgtaagtggagtatcgtat 8039178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 12183430 - 12183366
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggatt 173  Q
    ||||||||||||||||||||||||| |||||||||| ||| || |||||||||| |||| |||||    
T  12183430 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtacagtatcgtatccacatggatt 12183366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 28933757 - 28933689
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||| || ||||| ||| |||||||||| ||| ||||||||||||| ||||||||||||||||    
T  28933757 aagtgtaccatattgtttagcaaataataaagtgataagtagagtatcgtatccacaaggattatcgtt 28933689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 21679950 - 21679883
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatc 176  Q
    ||||||| |||||||||||||| || |||||||||| ||| ||||||||||||| |||| ||||||||    
T  21679950 gcaagtgcaccaaatcgtttactaagtaataaagtgataagtagagtatcgtatccacatggattatc 21679883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 207
Target Start/End: Complemental strand, 26215494 - 26215388
Alignment:
Q  100 tcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgtt 199  Q
    ||||||||| ||||  |||||||||| ||| |||| ||||||||||||| ||||||||||||| || |  |||| ||||| |||  ||||||||  ||||    
T  26215494 tcggatttaggcaatagtaccaaatcattt-ccaaataataaagtgtaagtagagtatcgtatccatatagattgtcgtttcaattaggcaattcacgtt 26215396  T
Q  200 acttattt 207  Q
    ||||||||    
T  26215395 acttattt 26215388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 23645861 - 23645755
Alignment:
Q  115 tgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgggaac 213  Q
    |||||||||||||||||||| |||||||||| ||| ||||||||||||| || | ||||| ||||| |  |||  |||||  ||||| ||||||  ||||    
T  23645861 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcgtccaaacaattatcgttaattatttttgaac 23645762  T
Q  214 aataaaa 220  Q
    |||||||    
T  23645761 aataaaa 23645755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 27737788 - 27737690
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    |||||||||| |||||||||||||| |||||||||| ||| ||||||||| ||  |||||||||| | ||| |  |||  ||||| |||||||||||||    
T  27737788 gcaagtgtactaaatcgtttaccaagtaataaagtgataagtagagtatcatacccacaaggattgttgtttcgtccaaacaattcgcgttacttattt 27737690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 8241277 - 8241338
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaagg 170  Q
    |||||||||||||||||||||| || ||| |||||| ||| ||||||||||||| |||||||    
T  8241277 gcaagtgtaccaaatcgtttacgaagtaagaaagtgataagtagagtatcgtatccacaagg 8241338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 215
Target Start/End: Complemental strand, 17299925 - 17299824
Alignment:
Q  115 tgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgggaac 213  Q
    |||| ||||||||||||||| |||||||||| ||| ||||||||||||| ||   ||||| |||||    |||  |||||||||||||||||||| ||||    
T  17299925 tgtagcaaatcgtttaccaagtaataaagtgataagtagagtatcgtattcatcgggattgtcgtttagtccaaacaatttgcgttacttatttgagaac 17299826  T
Q  214 aa 215  Q
    ||    
T  17299825 aa 17299824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 20005977 - 20005908
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||||||||||||||| |||||||||| |||  ||||||||||||  ||| ||||| |||||    
T  20005977 caagtgtaccaaatcgtttaccaagtaataaagtgataagcagagtatcgtatctacatggattttcgtt 20005908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 5624640 - 5624696
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtataca 165  Q
    |||| |||||||||||||||||||| |||||||||| ||| ||||||||| ||||||    
T  5624640 gcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcttataca 5624696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 9386070 - 9386154
Alignment:
Q  136 taataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgggaacaataaaa 220  Q
    ||||||||||||| ||||||||||||| ||||  |||||||| | |||| ||| ||||   ||||||||||| ||||||| ||||    
T  9386070 taataaagtgtaagtagagtatcgtatccacatagattatcgattcaactaggaaattcaagttacttatttaggaacaagaaaa 9386154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 14079543 - 14079491
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgta 161  Q
    ||||||||||||||||||||||||| | |||||||| ||| ||||||||||||    
T  14079543 gcaagtgtaccaaatcgtttaccaagttataaagtgataagtagagtatcgta 14079491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 25927402 - 25927338
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggatt 173  Q
    |||||||||||||| |||||||||| |||||||||| ||| |||| |||||||| |||| |||||    
T  25927402 gcaagtgtaccaaaacgtttaccaagtaataaagtgataagtagaatatcgtatccacatggatt 25927338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 27124589 - 27124521
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||||||||||||| |||||||||| |||||| | ||||||||  ||| ||||| |||||    
T  27124589 aagtgtaccaaatcgtttaccaagtaataaagtgataattatattatcgtatcgacatggattgtcgtt 27124521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 21932151 - 21932100
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgt 160  Q
    ||||||||||||||| ||||||||| |||||||||| ||| |||||||||||    
T  21932151 gcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgt 21932100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 28589535 - 28589452
Alignment:
Q  104 atttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaacca 186  Q
    ||||| ||||||||||||||||||||| ||| ||| |||||| ||| || |||||||||  |||| ||||| ||||| ||||||    
T  28589535 atttaggcaagtgtaccaaatcgtttatcaaataacaaagtgataagtaaagtatcgtagccacatggattttcgtttcaacca 28589452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 17827191 - 17827093
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    ||||||||||||| |||||||  || |||||||||  ||| ||||||||||||| |||| ||||| ||||| |  |||  ||||| |||||||||||||    
T  17827191 gcaagtgtaccaactcgtttaataagtaataaagttataaatagagtatcgtatccacatggattgtcgtttcttccaaacaattcgcgttacttattt 17827093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 28586144 - 28586018
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatt 193  Q
    |||| |||||||||  ||||| |||||||||||||||| | ||||||| || ||| ||||||||| |||  ||| ||||| ||||| |||| |  ||||     
T  28586144 gatggtcggatttagacaagtataccaaatcgtttaccgagtaataaattgataagtagagtatcatatcgacatggattgtcgtttcaacaaaacaatc 28586045  T
Q  194 tgcgttacttatttgggaacaataaaa 220  Q
      |||||||||||||| ||| ||||||    
T  28586044 cacgttacttatttggaaactataaaa 28586018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 4339736 - 4339805
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||||| ||||| ||| |||||||||| ||| |||||||| |||| ||||| |||| |||||    
T  4339736 caagtgtaccaaattgtttatcaaataataaagtgataagtagagtattgtatccacaatgattgtcgtt 4339805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 15614209 - 15614169
Alignment:
Q  177 gttccaaccaggcaatttgcgttacttatttgggaacaata 217  Q
    |||||||| ||||||||  ||||||||||||||||||||||    
T  15614209 gttccaactaggcaattcacgttacttatttgggaacaata 15614169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 5e-25; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 25756660 - 25756786
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagt-gtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatt 193  Q
    |||| ||||||||| |||||||||| ||||| |||| ||| ||||||||  |||| ||||||||||||| |||||  ||| |||||| ||| ||||||||    
T  25756660 gatggtcggatttaggcaagtgtacaaaatcatttatcaaataataaagaagtaagtagagtatcgtatccacaaaaattgtcgttctaactaggcaatt 25756759  T
Q  194 tgcgttacttatttgggaacaataaaa 220  Q
    || ||||||||||||||||||||||||    
T  25756760 tgtgttacttatttgggaacaataaaa 25756786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 21074651 - 21074526
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaattt 194  Q
    |||||| ||||||| |||| ||||||||||| | || ||| ||||||||||||| ||||||||||||| ||| || ||| |||||||||| | | ||||     
T  21074651 gatgattggatttatgcaactgtaccaaatcatctatcaagtaataaagtgtaagtagagtatcgtatccaccagaattgtcgttccaactatgtaattc 21074552  T
Q  195 gcgttacttatttgggaacaataaaa 220  Q
     ||||||||| |||||||||| ||||    
T  21074551 acgttacttacttgggaacaagaaaa 21074526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 12759388 - 12759498
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgg 209  Q
    |||||||||||||| ||||||||| |||||||||| ||| ||||||||||||| |||||| ||| ||||| ||| ||   |||  || ||||||||||||    
T  12759388 caagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgtatccacaagtattgtcgtttcaaacaaaaaatccgctttacttatttgg 12759487  T
Q  210 gaacaataaaa 220  Q
    |||||||||||    
T  12759488 gaacaataaaa 12759498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 12805989 - 12805891
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    |||||||||||||||| |||||||| |||||||||| ||| ||||||||| ||| |||| ||||| ||||| || |||  |||||||||||||||||||    
T  12805989 gcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcatccaaacaatttgcgttacttattt 12805891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 27543011 - 27542908
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaattt-gcgttacttatttggg 210  Q
    ||||||| |||||||||||||||  |||||||| ||| ||||||||||||| |||| | ||| | |||||||| ||||||||| | ||| ||||||||||    
T  27543011 aagtgtatcaaatcgtttaccaagaaataaagtataagtagagtatcgtatccacatgaattgttgttccaactaggcaatttcgtgttgcttatttggg 27542912  T
Q  211 aaca 214  Q
    ||||    
T  27542911 aaca 27542908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 28728929 - 28729051
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatt 193  Q
    |||| ||||||||| ||||||||  |||||  |||| ||| |||||||||| ||| ||||||||||||| ||||  |||| ||||| ||||||  |||||    
T  28728929 gatggtcggatttaggcaagtgtgtcaaataatttatcaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaatt 28729028  T
Q  194 tgcgttacttatttgggaacaat 216  Q
     ||||||||| ||||||||||||    
T  28729029 cgcgttacttgtttgggaacaat 28729051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 21825965 - 21825904
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggatt 173  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||||||||| |||| |||||    
T  21825965 aagtgtaccaaatcgtttaccgagtaataaagtgtaagtagagtatcgtatccacatggatt 21825904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 10917918 - 10917982
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggatt 173  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||| |||| |||||    
T  10917918 gcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatggatt 10917982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 207
Target Start/End: Complemental strand, 20339877 - 20339765
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaattt 194  Q
    |||||| ||||||| | |||| || ||||||||||||||| ||||||| ||||| ||||||||||||| |||| |  || | ||| |||||||||||||     
T  20339877 gatgattggatttagggaagtatatcaaatcgtttaccaagtaataaaatgtaagtagagtatcgtattcacatgtgttgttgtttcaaccaggcaattg 20339778  T
Q  195 gcgttacttattt 207  Q
      |||||||||||    
T  20339777 atgttacttattt 20339765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 21301918 - 21301982
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggatt 173  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||| |||| |||||    
T  21301918 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggatt 21301982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 179
Target Start/End: Complemental strand, 821617 - 821543
Alignment:
Q  106 ttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||| || |||||||||||||||||| |||||||||| ||| ||||||||||||| |||| ||||| |||||    
T  821617 ttaagcatgtctaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattttcgtt 821543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 31286112 - 31286050
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggatt 173  Q
    ||||||||||||||| |||||||| ||||||||||||| |||| |||||||| |||| |||||    
T  31286112 caagtgtaccaaatcatttaccaagtaataaagtgtaactagaatatcgtatccacagggatt 31286050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 22349410 - 22349467
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacaca 167  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||||||||||| ||||    
T  22349410 caagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccaca 22349467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 18736769 - 18736718
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtat 162  Q
    |||||||||||||||||||||||| ||||||||| ||| |||| ||||||||    
T  18736769 caagtgtaccaaatcgtttaccaagtaataaagtataagtagaatatcgtat 18736718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 12411151 - 12411221
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||||||  ||||||| |||||||||| | | ||||||||||||| |||||||||| |||||    
T  12411151 gcaagtgtaccaaatcacttaccaagtaataaagtgattagtagagtatcgtatccacaaggattgtcgtt 12411221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 16245827 - 16245761
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatc 176  Q
    |||||||||||| ||||||||||| |||||||||| ||| ||||||||| ||| |||| ||||||||    
T  16245827 caagtgtaccaactcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatc 16245761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 21303453 - 21303355
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    ||||||||| ||||||||||||||| ||||||| || ||| ||||||||||||  ||||| |||| | ||| || |||  |||||| ||||||||||||    
T  21303453 gcaagtgtatcaaatcgtttaccaaataataaaatgataagtagagtatcgtagccacaaagattgttgtttcatccaaacaatttccgttacttattt 21303355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 8557211 - 8557122
Alignment:
Q  127 tttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgggaacaa 215  Q
    |||||| | |||||||||| ||| ||||||||||||| |||| ||||| ||||| ||   |  |||||||||||||||||||||||||||    
T  8557211 tttaccgagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatttaaacaatttgcgttacttatttgggaacaa 8557122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 10923150 - 10923211
Alignment:
Q  113 agtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggatt 173  Q
    ||||||||||||| |||||||| |||||||||| |||||| |||||||||| ||| ||||||    
T  10923150 agtgtaccaaatcatttaccaagtaataaagtgataattacagtatcgtatccacgaggatt 10923211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 19706900 - 19706831
Alignment:
Q  104 atttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggatt 173  Q
    ||||||||||||||| ||||| ||||||||| |||||||| |||| || |||||| ||| |||| |||||    
T  19706900 atttaagcaagtgtatcaaattgtttaccaaataataaagagtaagtaaagtatcatatccacatggatt 19706831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 19908307 - 19908368
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaagg 170  Q
    ||||||||||||||||||||||||| ||||||| || ||| || |||||||||| |||||||    
T  19908307 gcaagtgtaccaaatcgtttaccaaataataaaatgataagtatagtatcgtatccacaagg 19908368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 6289903 - 6289970
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatc 176  Q
    |||| |||| ||||||||||||||| |||||||||| ||| ||||||||| ||| |||| ||||||||    
T  6289903 gcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatc 6289970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 10744902 - 10744953
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgt 160  Q
    |||||| |||||||||||||||||| |||||||||| ||| |||||||||||    
T  10744902 gcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtatcgt 10744953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 18458522 - 18458459
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggatt 173  Q
    |||||||||||||| ||||| ||| |||||||||| ||| ||||||||||||| ||||| ||||    
T  18458522 caagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccacaaagatt 18458459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 8143617 - 8143667
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtat 162  Q
    |||||||||||||||||||| ||  |||||||||||| |||||||| ||||    
T  8143617 aagtgtaccaaatcgtttactaagcaataaagtgtaagtagagtattgtat 8143667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 12752208 - 12752254
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtgtaattagagtat 157  Q
    |||||||||||||||||||||||| |||| |||||||| | ||||||    
T  12752208 caagtgtaccaaatcgtttaccaagtaatgaagtgtaagtggagtat 12752254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 21325340 - 21325438
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    ||||||||||||||| ||||||||| ||||||| || ||| || |||||||||| |||||  ||| ||||| |  |||  ||||||| |||||||||||    
T  21325340 gcaagtgtaccaaattgtttaccaagtaataaactgataagtatagtatcgtatccacaaaaattgtcgtttcgtccaaacaatttgtgttacttattt 21325438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 23056275 - 23056217
Alignment:
Q  104 atttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtat 162  Q
    ||||| ||||||||| |||| |||||||||| |||| |||||||| | |||||||||||    
T  23056275 atttatgcaagtgtatcaaaacgtttaccaagtaatgaagtgtaagttgagtatcgtat 23056217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 2167714 - 2167658
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacaca 167  Q
    |||||||||||||||| ||||||| |||||||||| ||| ||||||||||||| ||||    
T  2167714 caagtgtaccaaatcg-ttaccaagtaataaagtgataagtagagtatcgtatccaca 2167658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 2563818 - 2563915
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||| ||||| |  |||  ||||||| |||||||||||    
T  2563818 gcaagtgtaccaaatcgtttaccaagtaataaagtgtaagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatttgtgttacttattt 2563915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 4258983 - 4258875
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttggg 210  Q
    |||||||| ||||||||||||||| ||||||| ||||| ||||||||||||| || || |||| | ||| |||| |||||||||| ||||||| ||||||    
T  4258983 caagtgtaacaaatcgtttaccaaataataaaatgtaactagagtatcgtatccataatgattgttgtttcaactaggcaatttgtgttacttttttggg 4258884  T
Q  211 aacaataaa 219  Q
    |||||||||    
T  4258883 aacaataaa 4258875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 242
Target Start/End: Original strand, 9916551 - 9916699
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatt 193  Q
    |||| ||||||||| |||||| ||||||||| |||||||  |||||||||  ||| ||||||||||||| |||| ||||| | ||| ||||||  ||||     
T  9916551 gatggtcggatttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattgtagtttcaaccaaacaata 9916650  T
Q  194 tgcgttacttatttgggaacaataaaactaaataagagataaagattta 242  Q
    || |||||||||||||||||||| ||| ||||||| |||||| ||||||    
T  9916651 tgtgttacttatttgggaacaattaaaataaataaaagataacgattta 9916699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 242
Target Start/End: Original strand, 9924463 - 9924611
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatt 193  Q
    |||| ||||||||| |||||| ||||||||| |||||||  |||||||||  ||| ||||||||||||| |||| ||||| | ||| ||||||  ||||     
T  9924463 gatggtcggatttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattgtagtttcaaccaaacaata 9924562  T
Q  194 tgcgttacttatttgggaacaataaaactaaataagagataaagattta 242  Q
    || |||||||||||||||||||| ||| ||||||| |||||| ||||||    
T  9924563 tgtgttacttatttgggaacaattaaaataaataaaagataacgattta 9924611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 15303718 - 15303609
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttggg 210  Q
    |||||||||||||||||||||||  ||||||||||||| || ||||||||||  ||| | ||| |||||||||| ||| ||||  ||||||||||||| |    
T  15303718 caagtgtaccaaatcgtttaccaggtaataaagtgtaagtaaagtatcgtatctacacgaattgtcgttccaactaggaaattcacgttacttatttgag 15303619  T
Q  211 aacaataaaa 220  Q
    ||||||||||    
T  15303618 aacaataaaa 15303609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 110 - 220
Target Start/End: Complemental strand, 9864425 - 9864314
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttg 208  Q
    ||||||||||||||| ||||||||| |||||||||| ||| ||||||||| ||| |||||||||| ||||| |  | |  ||||||||||||||||||||    
T  9864425 gcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtctaaacaatttgcgttacttatttg 9864326  T
Q  209 ggaacaataaaa 220  Q
     |||||||||||    
T  9864325 agaacaataaaa 9864314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 103 - 214
Target Start/End: Complemental strand, 9866646 - 9866535
Alignment:
Q  103 gatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttact 202  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||||| ||||||||| ||| |||||  ||| |||||| ||| || |||||  |||||||    
T  9866646 gatttacgcaagtgtaccaaattgtttaccaaataataaagtgtaagtagagtatcatatccacaataattgtcgttctaactagacaattcacgttact 9866547  T
Q  203 tatttgggaaca 214  Q
    ||||||| ||||    
T  9866546 tatttggaaaca 9866535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 23093304 - 23093420
Alignment:
Q  104 atttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttactt 203  Q
    ||||| |||||||||||||||||||||| || ||||||||||||| |||||||| ||||  ||  ||||| ||||| |||| ||||||||    ||||||    
T  23093304 atttaggcaagtgtaccaaatcgtttactaagtaataaagtgtaagtagagtattgtatctacgtggattgtcgtttcaactaggcaattcaatttactt 23093403  T
Q  204 atttgggaacaataaaa 220  Q
    |||||||||||| ||||    
T  23093404 atttgggaacaagaaaa 23093420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 10937594 - 10937721
Alignment:
Q  102 ggatttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgtta 200  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||| ||| || |||||||||| |||| ||||| ||||| ||| ||  |||||  | |||    
T  10937594 ggatttaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacatta 10937693  T
Q  201 cttatttgggaacaataaaactaaataa 228  Q
    |||||||| |||||| |||| |||||||    
T  10937694 cttatttgagaacaacaaaaataaataa 10937721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 18449227 - 18449353
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgt-aattagagtatcgtatacacaaggattatcgttccaaccaggcaatt 193  Q
    |||| ||||||||| ||||||||| ||||| ||||||||| ||||||||||  || || | |||||||| || | ||||| ||||| || |||  |||||    
T  18449227 gatggtcggatttaggcaagtgtatcaaattgtttaccaagtaataaagtgagaagtataatatcgtatccatagggattgtcgtttcagccaaacaatt 18449326  T
Q  194 tgcgttacttatttgggaacaataaaa 220  Q
     ||||||||||||||||||||||||||    
T  18449327 ggcgttacttatttgggaacaataaaa 18449353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 20174564 - 20174690
Alignment:
Q  102 ggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttac 201  Q
    |||||||  ||||| ||||||||||||||| |  ||||||||||||| |||||||||| ||  ||| ||||| |||||| ||| ||| || | |||||||    
T  20174564 ggatttagacaagtataccaaatcgtttactaggtaataaagtgtaactagagtatcgcattaacatggattttcgttctaacgaggaaactcgcgttac 20174663  T
Q  202 ttatttgggaacaataaaactaaataa 228  Q
    ||||||||||||| | ||| |||||||    
T  20174664 ttatttgggaacatttaaaataaataa 20174690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 5108566 - 5108635
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||||||  |||||||| ||||||||||||| ||||||||||||| |||||||||| |||||    
T  5108566 gcaagtgtaccaaattatttaccaagtaataaagtgtaagtagagtatcgtatccacaaggattgtcgtt 5108635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 214
Target Start/End: Original strand, 2453725 - 2453837
Alignment:
Q  102 ggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttac 201  Q
    ||||||| |||||||||  |||| ||||| ||| ||||||| | ||| ||||||||||||| ||||  |||||| |||||||| || ||||| | |||||    
T  2453725 ggatttaggcaagtgtattaaattgtttatcaagtaataaaatttaagtagagtatcgtattcacatagattattgttccaactagacaattcgtgttac 2453824  T
Q  202 ttatttgggaaca 214  Q
    |||||||||||||    
T  2453825 ttatttgggaaca 2453837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 235
Target Start/End: Complemental strand, 5047500 - 5047361
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaattt 194  Q
    |||| ||||||||| |||||||||||||||| |||||||| ||||||||||||| |||| |||||||   || | |||| ||||| ||||||   || ||    
T  5047500 gatggtcggatttaggcaagtgtaccaaatcatttaccaagtaataaagtgtaagtagattatcgtacctacgaagattgtcgtttcaaccaaaaaaatt 5047401  T
Q  195 gcgttacttatttgggaacaataaaactaaataagagataa 235  Q
    | ||| |||||||  ||||||||||| ||||||| ||||||    
T  5047400 gtgttgcttatttaagaacaataaaa-taaataaaagataa 5047361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 13759957 - 13759889
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||| ||| |||||||||| |||||    
T  13759957 aagtgtaccaaatcgtttaccaattaataaagtgataagtagagtatcatatccacaaggattgtcgtt 13759889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 7397198 - 7397265
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||| |||||||||| ||||||||||||| ||||||||||||| |||| ||||| |||||    
T  7397198 aagtgtaccaaaccgtttaccaagtaataaagtgtaactagagtatcgtatccacatggattgtcgtt 7397265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 9078201 - 9078276
Alignment:
Q  144 tgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgggaacaataaa 219  Q
    ||||| |||| |||||||| |||| |||||||||||| ||| | |||||||||||||||||||||| |||||||||    
T  9078201 tgtaagtagattatcgtatccacagggattatcgttcaaactaagcaatttgcgttacttatttggtaacaataaa 9078276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 18662427 - 18662541
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatt 193  Q
    |||||||||||| ||||||||||| |||||||||||||||  | ||||||| ||| ||||||||||||| |||||||||| ||||| |  |||  |||||    
T  18662427 gatgatcggatt-aagcaagtgtatcaaatcgtttaccaagcactaaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatt 18662525  T
Q  194 tgcgttacttatttgg 209  Q
      ||||||||||||||    
T  18662526 cacgttacttatttgg 18662541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 8054157 - 8054099
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacaca 167  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||    
T  8054157 gcaagtgtaccaaatcgtttaccaagtaataaagtgataattagagtatcgtatccaca 8054099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 184
Target Start/End: Original strand, 9890168 - 9890258
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagt-gtaattagagtatcgtatacacaaggattatcgttccaac 184  Q
    |||| |||||||||||||||||||| |||||||||||| | ||||||||| |||| |||||||||||||   |||||||  ||||||||||    
T  9890168 gatggtcggatttaagcaagtgtactaaatcgtttaccgagtaataaagtagtaagtagagtatcgtatctgcaaggatagtcgttccaac 9890258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 16306695 - 16306805
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgg 209  Q
    ||||||||  ||||| |||| ||| |||||||||| ||| |||||||||||||  |||||||||||| || || | |  |||||||| ||||||||||||    
T  16306695 caagtgtataaaatcctttaacaagtaataaagtgataagtagagtatcgtatctacaaggattatcatttcatctaaacaatttgcattacttatttgg 16306794  T
Q  210 gaacaataaaa 220  Q
    |||||||||||    
T  16306795 gaacaataaaa 16306805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 220
Target Start/End: Original strand, 18465998 - 18466116
Alignment:
Q  103 gatttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttac 201  Q
    |||||| |||||  ||||||||| |||| ||| |||||||||| ||| ||||||| ||||| || | ||||| ||||| || |||  ||||||| |||||    
T  18465998 gatttaggcaaggataccaaatcatttatcaaataataaagtgataagtagagtaacgtatccatagggattctcgtttcagccaaacaatttgtgttac 18466097  T
Q  202 ttatttgggaacaataaaa 220  Q
    |||||||||||||||||||    
T  18466098 ttatttgggaacaataaaa 18466116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 14196071 - 14195974
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    ||||||||||||||||||||| ||| ||||||||||||| || |||| ||||| |||||| ||||| ||| |  |||  ||||| |||||||||||||    
T  14196071 gcaagtgtaccaaatcgtttatcaaataataaagtgtaagtaaagtaccgtatccacaagaattattgtttcgtccaaacaattcgcgttacttattt 14195974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 26134854 - 26134789
Alignment:
Q  102 ggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacaca 167  Q
    |||||||  |||||||||||||||||||||||| ||||||| ||||| ||||||||||||| ||||    
T  26134854 ggatttagacaagtgtaccaaatcgtttaccaagtaataaaatgtaagtagagtatcgtatccaca 26134789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 225
Target Start/End: Original strand, 9720949 - 9721072
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaattt 194  Q
    ||||||| |||||| ||||||||||||||||||||||||| |||||||||       ||  ||||||| |||| | |||| |||| ||||||  |||||     
T  9720949 gatgatcagatttatgcaagtgtaccaaatcgtttaccaaataataaagt-------gataatcgtatccacatgaattaccgtttcaaccaaacaattc 9721041  T
Q  195 gcgttacttatttgggaacaataaaactaaa 225  Q
    |||| |||||||||| |||||||||| ||||    
T  9721042 gcgtcacttatttggaaacaataaaaataaa 9721072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 7318273 - 7318343
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||| |||||||||||| |||||||||| ||| ||||||||||||| |||| ||||| |||||    
T  7318273 gcaagtgtaccatatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtt 7318343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 8054588 - 8054530
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacaca 167  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||| ||||    
T  8054588 gcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtattcaca 8054530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 10587123 - 10587053
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||||||||||||||| |||||||||| ||| |||||||||||||  ||| ||||| |||||    
T  10587123 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatctacagggattgtcgtt 10587053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 18661589 - 18661655
Alignment:
Q  109 agcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggatta 174  Q
    ||||||||||||||||||||||||||  ||||||||| ||| |||||||| |||| |||||||||||    
T  18661589 agcaagtgtaccaaatcgtttaccaaacaataaagtgataagtagagtattgtatccacaaggatta 18661655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 21230312 - 21230418
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttg 208  Q
    |||||| || ||||||||||||||| ||||||| || ||| ||||||||||||| || | ||||||||||| |  | | |||||||| ||||||||||||    
T  21230312 gcaagtatatcaaatcgtttaccaaataataaaatgataagtagagtatcgtattcatagggattatcgtttcgtctaagcaatttgtgttacttatttg 21230411  T
Q  209 ggaacaa 215  Q
     ||||||    
T  21230412 agaacaa 21230418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 23100051 - 23099993
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacaca 167  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||| ||||    
T  23100051 gcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccaca 23099993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 235
Target Start/End: Original strand, 12391170 - 12391310
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatt 193  Q
    ||||||||| |||| ||||||||||||||| ||||| ||| |||||||||| |||  ||||| |||||| |||| | ||| ||||| |||||     |||    
T  12391170 gatgatcggttttaggcaagtgtaccaaatagtttatcaaataataaagtgataagaagagtgtcgtattcacaggaattgtcgtttcaaccgaatgatt 12391269  T
Q  194 tgcgttacttatttgggaacaataaaactaaataagagataa 235  Q
     | ||||||||||| |||||||||||| ||||||| ||||||    
T  12391270 cgtgttacttatttaggaacaataaaa-taaataaaagataa 12391310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 207
Target Start/End: Original strand, 21227184 - 21227277
Alignment:
Q  115 tgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    ||||||||||| ||||| || |||||||||| ||| |||||||||||||  ||| | ||| |||||| ||| |||||||| |||||||||||||    
T  21227184 tgtaccaaatcatttacaaagtaataaagtgataagtagagtatcgtatctacatgaattctcgttctaactaggcaattcgcgttacttattt 21227277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 207
Target Start/End: Complemental strand, 3329755 - 3329659
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    ||||||| |||||  |||||||| |||||||||| ||| ||||||||||||| |||| ||||| ||||| || |||  |||| ||||||||||||||    
T  3329755 aagtgtatcaaattatttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatccaaacaatctgcgttacttattt 3329659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 15869595 - 15869659
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggatt 173  Q
    ||||||||| ||||||||||||||| |||||||||| ||| ||||||||||||| | ||||||||    
T  15869595 gcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccgcaaggatt 15869659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 9500444 - 9500555
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttg 208  Q
    |||||||||| ||||| |||||||| |||||| ||| | ||||||||||||||| |||||||||| | ||| |  | |  ||||| || ||||||||||     
T  9500444 gcaagtgtacaaaatcatttaccaagtaataatgtgatcattagagtatcgtatccacaaggattgttgtttcgtctaaacaattcgcattacttattta 9500543  T
Q  209 ggaacaataaaa 220  Q
    ||||||||||||    
T  9500544 ggaacaataaaa 9500555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 5797511 - 5797617
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttg 208  Q
    ||||||||| ||||||| ||||||| |||||||||  ||| ||||||||||||| |||| | ||| ||    ||||||  ||||||| ||||||||||||    
T  5797511 gcaagtgtaacaaatcgcttaccaagtaataaagtaataagtagagtatcgtatccacatgaattgtcaaatcaaccaaacaatttgtgttacttatttg 5797610  T
Q  209 ggaacaa 215  Q
    |||||||    
T  5797611 ggaacaa 5797617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 9731726 - 9731628
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    |||||||||||||||||||||  || || ||||||| ||| ||||||||||||  |||||||||| ||||| |  |||  ||||| |||||||||||||    
T  9731726 gcaagtgtaccaaatcgtttaaaaagtagtaaagtgataagtagagtatcgtaaccacaaggattgtcgtttcgtccaaacaattcgcgttacttattt 9731628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 179
Target Start/End: Complemental strand, 11221267 - 11221193
Alignment:
Q  106 ttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||||||||||||||||| || ||||||| || ||| |||||||| |||| |||| ||||| |||||    
T  11221267 ttaagcaagtgtaccaaatcgtttactaagtaataaattgataagtagagtattgtatccacagggattgtcgtt 11221193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 31492930 - 31493000
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||| ||||||||||||||  |||||||||| ||| ||||||||||||| |||| ||||| |||||    
T  31492930 gcaagtgtatcaaatcgtttaccaggtaataaagtgataagtagagtatcgtatccacatggattgtcgtt 31493000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 6042462 - 6042518
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacaca 167  Q
    |||||||| ||||||||||||||  ||||||| ||||| ||||||||||||| ||||    
T  6042462 caagtgtatcaaatcgtttaccatgtaataaaatgtaagtagagtatcgtatccaca 6042518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 16365707 - 16365775
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagt-gtaattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||||||||||||| |||||||||   || ||||||||||||| |||| ||||| |||||    
T  16365707 aagtgtaccaaatcgtttaccaagtaataaagtaaaaagtagagtatcgtatccacatggattgtcgtt 16365775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 162
Target Start/End: Original strand, 2953582 - 2953625
Alignment:
Q  119 ccaaatcgtttaccaattaataaagtgtaattagagtatcgtat 162  Q
    |||||||||||| ||| ||||||||||||| |||||||||||||    
T  2953582 ccaaatcgtttatcaaataataaagtgtaagtagagtatcgtat 2953625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 6005839 - 6005906
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgtt 179  Q
    |||| |||||||| ||||||||||||||||| |||||  ||||||| |||| |||| ||||| |||||    
T  6005839 aagtttaccaaattgtttaccaattaataaattgtaaccagagtattgtatccacatggattgtcgtt 6005906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 145
Target Start/End: Original strand, 20582259 - 20582294
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg 145  Q
    ||||| ||||||||||||||||||||||||||||||    
T  20582259 gcaagggtaccaaatcgtttaccaattaataaagtg 20582294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 2350846 - 2350776
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||||||| |||||||| ||||||| || ||| |||| |||||||| |||| ||||| |||||    
T  2350846 gcaagtgtaccaaatcatttaccaagtaataaactgctaagtagattatcgtatccacatggattgtcgtt 2350776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 145
Target Start/End: Original strand, 4986556 - 4986590
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg 145  Q
    |||||||||||||||||||||||| ||||||||||    
T  4986556 caagtgtaccaaatcgtttaccaagtaataaagtg 4986590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 145
Target Start/End: Original strand, 4990654 - 4990688
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg 145  Q
    |||||||||||||||||||||||| ||||||||||    
T  4990654 caagtgtaccaaatcgtttaccaagtaataaagtg 4990688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 7748142 - 7748088
Alignment:
Q  152 gagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatt 206  Q
    ||||||||||| |||| |||||||||||||||| |||||| | || |||||||||    
T  7748142 gagtatcgtatccacatggattatcgttccaactaggcaactagcattacttatt 7748088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 8979103 - 8979041
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggatt 173  Q
    |||||||||||||| |||||||| |||||||||| ||| ||||||||| ||| |||| |||||    
T  8979103 aagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggatt 8979041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 12329682 - 12329752
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||| |||||||||||||||||||| ||| ||| || ||| |||||||| |||| |||||||||| |||||    
T  12329682 gcaaatgtaccaaatcgtttaccaagtaagaaattgataaatagagtatagtatccacaaggattgtcgtt 12329752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 33035458 - 33035583
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatt 193  Q
    |||| ||||||||| ||||||||| ||||||||||||| | |||||||||| ||  |||||||||| ||  ||  || || |||| ||||| ||||||||    
T  33035458 gatggtcggatttaggcaagtgtatcaaatcgtttacc-agtaataaagtgataggtagagtatcgcatctacgtggcttgtcgtaccaactaggcaatt 33035556  T
Q  194 tgcgttacttatttgggaacaataaaa 220  Q
      | ||||||||||| |||||| ||||    
T  33035557 cacattacttatttgagaacaagaaaa 33035583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 9574407 - 9574460
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtat 162  Q
    |||||||||| ||||||||||||||  ||||||||| ||| |||||||||||||    
T  9574407 gcaagtgtactaaatcgtttaccaaggaataaagtgataagtagagtatcgtat 9574460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 10584584 - 10584515
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||||||||||| ||| |||||||||| |||  | |||||||||| |||| ||||| |||||    
T  10584584 caagtgtaccaaatcgtttatcaagtaataaagtgataagcaaagtatcgtatccacatggattgtcgtt 10584515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 3734598 - 3734654
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacaca 167  Q
    |||||||||||||  |||||||| |||||||||| ||| ||||||||||||| ||||    
T  3734598 aagtgtaccaaattttttaccaagtaataaagtgataagtagagtatcgtatccaca 3734654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 6013593 - 6013657
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggatt 173  Q
    |||||||||||||||| |||| ||| || | ||||| ||| ||||||||||||| ||||||||||    
T  6013593 gcaagtgtaccaaatcatttatcaagtacttaagtgataagtagagtatcgtatccacaaggatt 6013657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 9130906 - 9130977
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtata--cacaaggattatcgtt 179  Q
    ||||||||| ||||| ||||| ||| ||||||||||||| || ||||| |||||  |||| |||||||||||    
T  9130906 gcaagtgtatcaaattgtttatcaagtaataaagtgtaagtatagtattgtatatccacatggattatcgtt 9130977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 17203050 - 17203142
Alignment:
Q  136 taataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgggaacaataaaactaaataa 228  Q
    ||||||||| ||| ||||||||||||| |||  ||||| ||||| |  |||  ||||  |||||||||||||  ||||||||||| |||||||    
T  17203050 taataaagtataagtagagtatcgtattcacggggattgtcgtttcgtccaaacaatccgcgttacttatttttgaacaataaaattaaataa 17203142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 29382460 - 29382362
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||| |||| ||||| ||||| || |||  |||||||||||||||||||    
T  29382460 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattgtcgtttcatccaaacaatttgcgttacttattt 29382362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 14075586 - 14075719
Alignment:
Q  102 ggatttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgtta 200  Q
    ||||||| | || ||||||||||| |||||||| ||| |||||| ||| |||| |||||||| |||| ||||| ||||| ||||||  |||| |||||||    
T  14075586 ggatttaggaaattgtaccaaatcttttaccaagtaagaaagtgataagtagactatcgtatccacatggattgtcgtttcaaccaaacaatgtgcgtta 14075685  T
Q  201 cttatttgggaacaataaaactaaataagagataa 235  Q
    ||||||| |||| ||||||| ||||||||||||||    
T  14075686 cttatttaggaataataaaa-taaataagagataa 14075719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 15292748 - 15292857
Alignment:
Q  127 tttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgggaacaataaaactaaat 226  Q
    |||||||| ||||||||||||| |||||| ||| || |||| ||||| |||||||||  ||||||||  |||||||||||||||||||| ||||  ||||    
T  15292748 tttaccaagtaataaagtgtaagtagagtttcggattcacatggattgtcgttccaattaggcaattcacgttacttatttgggaacaagaaaataaaat 15292847  T
Q  227 aagagataaa 236  Q
    || |||||||    
T  15292848 aaaagataaa 15292857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 15473117 - 15473226
Alignment:
Q  127 tttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgggaacaataaaactaaat 226  Q
    |||||||| ||||||||||||| |||||| ||| || |||| ||||| |||||||||  ||||||||  |||||||||||||||||||| ||||  ||||    
T  15473117 tttaccaagtaataaagtgtaagtagagtttcggattcacatggattgtcgttccaattaggcaattcacgttacttatttgggaacaagaaaataaaat 15473216  T
Q  227 aagagataaa 236  Q
    || |||||||    
T  15473217 aaaagataaa 15473226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 24119866 - 24119750
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttggg 210  Q
    ||||||| |||||||||||||||| | ||||||||||| |||||||| |||| |||| ||||| |||||||||| | | ||||  |  ||||||||||||    
T  24119866 caagtgtgccaaatcgtttaccaagttataaagtgtaagtagagtattgtatccacatggattttcgttccaactaagaaattcacactacttatttggg 24119767  T
Q  211 aacaataaaactaaata 227  Q
     ||||| ||| ||||||    
T  24119766 tacaattaaaataaata 24119750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 162
Target Start/End: Original strand, 31288343 - 31288410
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtat 162  Q
    |||| ||||||||| | ||||||||||||||||||||||| ||||||||||||| || ||||||||||    
T  31288343 gatggtcggatttaggaaagtgtaccaaatcgtttaccaagtaataaagtgtaagtaaagtatcgtat 31288410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 12268182 - 12268300
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaattt 194  Q
    |||| ||||||||| ||||||| |||||||  |||| ||| |||||||||||||  ||||||||||||  | ||| ||| |||||| ||| || ||||||    
T  12268182 gatggtcggatttaggcaagtgcaccaaataatttatcaagtaataaagtgtaaacagagtatcgtatttataagaattgtcgttctaactagccaattt 12268281  T
Q  195 gcgttacttatttgggaac 213  Q
     | ||||||||||||||||    
T  12268282 ccattacttatttgggaac 12268300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 111 - 215
Target Start/End: Original strand, 5850942 - 5851047
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttgg 209  Q
    |||||||||| ||||||||||||| |||||||||| ||| ||||||||||||| ||||  |||| ||||| ||||||  ||||  | ||||||||||||     
T  5850942 caagtgtacctaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaatccgtgttacttatttga 5851041  T
Q  210 gaacaa 215  Q
    ||||||    
T  5851042 gaacaa 5851047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 24269598 - 24269667
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||||||  |||||||| ||||||||||||| ||||||||||||| |||| ||||| |||||    
T  24269598 gcaagtgtaccaaattatttaccaagtaataaagtgtaagtagagtatcgtatccacagggattgtcgtt 24269667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 95 - 219
Target Start/End: Original strand, 26008008 - 26008133
Alignment:
Q  95 gatgatcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatt 193  Q
    |||| ||| ||||| |||||||||||||||| |||||||| |||||||||| ||| |||||||| ||||  | | ||||| || ||||||| ||  ||||    
T  26008008 gatggtcgaatttaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatggtatcaagagggattgtcattccaactagaaaatt 26008107  T
Q  194 tgcgttacttatttgggaacaataaa 219  Q
     |||||||||||||| ||| ||||||    
T  26008108 cgcgttacttatttgagaataataaa 26008133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 44011116 - 44011053
Alignment:
Q  116 gtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||| |||| ||||| |||||    
T  44011116 gtaccaaatcgtttacgaagtaataaagtgtaagtagagtatcgtatccacatggattgtcgtt 44011053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 13697862 - 13697925
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||||||||||||||||||||||||      ||||||||||||| |||||||||| |||||    
T  13697862 gcaagtgtaccaaatcgtttaccaattaataaag------tagagtatcgtatccacaaggattttcgtt 13697925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 24644838 - 24644907
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||| ||||||  |||||||| ||||||||||||| |||||||| |||| |||| |||||||||||    
T  24644838 gcaagtgtgccaaattatttaccaagtaataaagtgtaagtagagtattgtatccacatggattatcgtt 24644907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 14006088 - 14006195
Alignment:
Q  103 gatttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttac 201  Q
    |||||| | ||||||| || ||| |||||||| ||||||| || ||| ||||||||| ||| |||| | ||| | |||||||| ||||||||||| ||||    
T  14006088 gatttaggtaagtgtatcatatcatttaccaagtaataaaatgataagtagagtatcatattcacatgaattgttgttccaactaggcaatttgcattac 14006187  T
Q  202 ttatttgg 209  Q
    ||||||||    
T  14006188 ttatttgg 14006195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 17101990 - 17101896
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttat 205  Q
    ||||||| ||||||||||||||| |||||||||| ||| ||||||||||||| || | ||||| ||||| || |||  |||| || |||||||||    
T  17101990 aagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcatccaaacaatatgtgttacttat 17101896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 24114381 - 24114283
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    ||||||||||||||| ||||||||| ||||||| || ||| ||||||||||||| | || ||||| ||||| |  |||  ||| |||||||||||||||    
T  24114381 gcaagtgtaccaaattgtttaccaagtaataaaatgataagtagagtatcgtatccgcagggattgtcgtttcgtccaaacaacttgcgttacttattt 24114283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 230
Target Start/End: Original strand, 17976619 - 17976740
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttg 208  Q
    |||||||| ||||||| |||| ||| |||||||||| ||| ||||||||||||| ||||| |||| ||||| |  | |  || || || |||||||||||    
T  17976619 gcaagtgtgccaaatcatttatcaagtaataaagtgataagtagagtatcgtatccacaaagattttcgtttcgtctacacatttcgcattacttatttg 17976718  T
Q  209 ggaacaataaaactaaataaga 230  Q
    ||||||| | || |||||||||    
T  17976719 ggaacaaaataaataaataaga 17976740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 25226137 - 25226234
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttattt 207  Q
    ||||||||| |||||||||| ||| |||||||||| ||| | |||||||||||| ||| ||||||| ||| |  |||  ||||||||||||| |||||    
T  25226137 caagtgtactaaatcgtttatcaagtaataaagtgataagttgagtatcgtatatacagggattattgtttcctccaaacaatttgcgttacatattt 25226234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 30783835 - 30783782
Alignment:
Q  115 tgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacaca 167  Q
    |||||||||||||||||||| |||||||||| ||| ||||||||||||| ||||    
T  30783835 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 30783782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 24904633 - 24904744
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttg 208  Q
    |||||||||||||||| |||||||| |||||||||| ||| ||||||||| ||| ||||  |||| ||||| |  | |  |||||  | |||||||||||    
T  24904633 gcaagtgtaccaaatcatttaccaaataataaagtgataagtagagtatcatatccacagtgattgtcgtttcgtctaaacaattcacattacttatttg 24904732  T
Q  209 ggaacaataaaa 220  Q
     |||||||||||    
T  24904733 agaacaataaaa 24904744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 30122253 - 30122190
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggatt 173  Q
    ||||||||||||||||  || |||| ||||||||||||| ||||||||| ||| |||| |||||    
T  30122253 gcaagtgtaccaaatcactttccaagtaataaagtgtaagtagagtatcatatccacatggatt 30122190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 14528149 - 14528207
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacaca 167  Q
    |||||||| |||||||||||||||| |||||||||| ||  ||||||||||||| ||||    
T  14528149 gcaagtgtgccaaatcgtttaccaagtaataaagtgatacgtagagtatcgtatccaca 14528207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 203
Target Start/End: Original strand, 17972172 - 17972264
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttactt 203  Q
    ||||| |||||||||| || | ||| ||||||||||||| ||||||||||||| | || ||||| || ||| ||| ||||||||  ||||||||    
T  17972172 gcaagcgtaccaaatcatt-atcaagtaataaagtgtaagtagagtatcgtatccgcatggattgtcattctaactaggcaattcacgttactt 17972264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 24110754 - 24110690
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggatt 173  Q
    ||||||||| |||||| |||||||| ||||||| || ||| ||||||||||||| ||||| ||||    
T  24110754 gcaagtgtatcaaatcatttaccaagtaataaaatgataagtagagtatcgtatccacaacgatt 24110690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 103 - 265
Target Start/End: Complemental strand, 14013 - 13853
Alignment:
Q  103 gatttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagt---atcgtatacacaaggattatcgttccaaccaggcaatttgcgtt 199  Q
    |||||| ||||||||| ||||||||||||||| |||| |||||||| |||| |   |||||  ||||| ||||| || ||||||| || ||||| |||||    
T  14013 gatttaggcaagtgtatcaaatcgtttaccaagtaattaagtgtaagtagaattatatcgtgaacacatggattgtcattccaactagacaattagcgtt 13914  T
Q  200 acttatttgggaacaataaaactaaataagagataaagatttaaggggtttttcaattttatttgt 265  Q
    ||||||||||||||||||     |||||| |||||||   | ||||||||||||||||| ||||||    
T  13913 acttatttgggaacaata-----aaataaaagataaaaggtaaaggggtttttcaatttgatttgt 13853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 219
Target Start/End: Original strand, 12099 - 12219
Alignment:
Q  100 tcggatttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgt 198  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||| || ||| || | |||||||| || | ||||| || || |||| || ||| |||||     
T  12099 tcggatttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtaaactatcgtattcatatggattgtcatttcaacaagacaacttgcgc 12198  T
Q  199 tacttatttgggaacaataaa 219  Q
    |||||||||||||||||||||    
T  12199 tacttatttgggaacaataaa 12219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 728 - 798
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||||||||||||||| |||||||||| ||| |||||||| ||||  ||||||||| |||||    
T  728 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatcaacaaggattgtcgtt 798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 22287 - 22365
Alignment:
Q  116 gtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgttccaaccaggcaattt 194  Q
    |||||||||||||||||||||||| || ||||| |||||||| |||| ||| |||||| ||||  |||| |||||||||    
T  22287 gtaccaaatcgtttaccaattaatgaaatgtaagtagagtatggtatgcacgaggattgtcgtatcaactaggcaattt 22365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 29909 - 29959
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtat 162  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  29909 aagtgtaccaaatcgtttaccaagtaataaagtgtaagtagagtatggtat 29959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 69913 - 69983
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||||||||||| |||||||| ||||||||||  || || ||||||||||||||||||||| |||||    
T  69913 gcaagtgtaccaaatcatttaccaagtaataaagtgacaagtaaagtatcgtatacacaaggattgtcgtt 69983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 11232 - 11346
Alignment:
Q  102 ggatttaagcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgtta 200  Q
    |||||||  ||||||||| |||| ||||| ||| |||||||||| ||| ||||||||| |||  ||| ||||| | ||| ||||||  |||||||| |||    
T  11232 ggatttagacaagtgtactaaattgtttatcaaataataaagtgataagtagagtatcatatctacatggattgttgtttcaaccaaacaatttgcatta 11331  T
Q  201 cttatttgggaacaa 215  Q
    |||||||||||||||    
T  11332 cttatttgggaacaa 11346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 168397 - 168339
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacaca 167  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||| ||||    
T  168397 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 168339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 89951 - 89883
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggattatcgtt 179  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||||| |||  ||||| ||| |||||    
T  89951 caagtgtatcaaatcgtttaccaagtaataaagtgtaagtagagtatcatatctacaagtattgtcgtt 89883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 54862 - 54930
Alignment:
Q  112 aagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgtt 179  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||||| |||| |||| ||||| |||||    
T  54862 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacagggattgtcgtt 54930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 48289 - 48236
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtat 162  Q
    |||| |||| ||||||||||||||| |||||||||| ||| |||||||||||||    
T  48289 gcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtat 48236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 3153 - 3216
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtatacacaaggatt 173  Q
    |||||||||| |||| ||||||||| ||||||||||||  ||||||||||||| |||| |||||    
T  3153 gcaagtgtacaaaattgtttaccaagtaataaagtgtatgtagagtatcgtatccacacggatt 3216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 2371 - 2434
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggatt 173  Q
    |||||||||||||||||||||||| |||||||| | ||| ||||||||||||| |||| |||||    
T  2371 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggatt 2434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 2402 - 2465
Alignment:
Q  111 caagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggatt 173  Q
    |||||||||||||||||||||||| |||||||| | ||| ||||||||||||| |||| |||||    
T  2402 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggatt 2465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 78594 - 78705
Alignment:
Q  110 gcaagtgtaccaaatcgtttaccaattaataaagtg-taattagagtatcgtatacacaaggattatcgttccaaccaggcaatttgcgttacttatttg 208  Q
    |||||||||||| |||||||||||| ||||||| || ||| |  || ||||||| || ||||||| ||||| |||| |  ||||  ||||||||||||||    
T  78594 gcaagtgtaccatatcgtttaccaagtaataaactgataagttaagcatcgtatccataaggattgtcgtttcaacaaaccaatccgcgttacttatttg 78693  T
Q  209 ggaacaataaaa 220  Q
    | ||||||||||    
T  78694 gcaacaataaaa 78705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 5377 - 5321
Alignment:
Q  106 ttaagcaagtgtaccaaatcgtttaccaattaataaagtgtaattagagtatcgtat 162  Q
    ||||| ||||||| ||||||||||| ||| ||||||| ||||| |||||||| ||||    
T  5377 ttaagaaagtgtatcaaatcgtttatcaagtaataaaatgtaactagagtattgtat 5321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University